Peroxisome biogenesis protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G08470 AT5G08470 AT5G08470 AT5G08470 |
| fragaria_vesca | FvH4_3g12310 |
| malus_domestica | MD05G1251500.v1.1 MD15G1400900.v1.1 |
| prunus_persica | Prupe.4G112300_v2.0.a1 |
| pyrus_communis | pycom05g22920 |
| rosa_chinensis | RchiOBHm_Chr5g0020121 |
| rosa_laevigata | RLG00000032502 |
| rosa_multiflora | Rmu_sc0000116.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00058080 |
| rosa_rugosa | Rorug05G0057400 Rorug05G0057400 |
| rosa_samantha | Rh5AG147300 Rh5BG146900 Rh5CG158300 Rh5DG146200 |
| rosa_wichuraiana | Rw5G013020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 2496 |
| Acc16I | TGCGCA | 2 cut(s) | 593, 3255 |
| AccB1I | GGYRCC | 1 cut(s) | 167 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2516, 3095 |
| AccBSI | CCGCTC | 1 cut(s) | 2222 |
| AccI | GTMKAC | 3 cut(s) | 2167, 2968, 3266 |
| AccII | CGCG | 1 cut(s) | 2490 |
| AciI | CCGC | 6 cut(s) | 145, 418, 1425, 2171, 2220, 2635 |
| AclWI | GGATC | 6 cut(s) | 596, 1276, 1289, 1595, 2038, 3218 |
| AcoI | YGGCCR | 1 cut(s) | 415 |
| AcsI | RAATTY | 8 cut(s) | 772, 834, 1098, 2066, 2262, 2597, 2837, 3198 |
| AcuI | CTGAAG | 6 cut(s) | 510, 707, 1610, 2001, 2172, 2751 |
| AcyI | GRCGYC | 2 cut(s) | 168, 2493 |
| AdeI | CACNNNGTG | 1 cut(s) | 2240 |
| AfaI | GTAC | 1 cut(s) | 1407 |
| AflIII | ACRYGT | 2 cut(s) | 1777, 1870 |
| AhlI | ACTAGT | 1 cut(s) | 616 |
| AjiI | CACGTC | 1 cut(s) | 3103 |
| AjnI | CCWGG | 7 cut(s) | 455, 481, 1771, 1798, 2662, 3001, 3275 |
| AleI | CACNNNNGTG | 1 cut(s) | 627 |
| Alw21I | GWGCWC | 5 cut(s) | 259, 666, 949, 2114, 2186 |
| Alw26I | GTCTC | 8 cut(s) | 52, 505, 607, 930, 1568, 1847, 2263, 2992 |
| AlwI | GGATC | 6 cut(s) | 596, 1276, 1289, 1595, 2038, 3218 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 147, 353, 488, 2908 |
| Ama87I | CYCGRG | 1 cut(s) | 2454 |
| AoxI | GGCC | 6 cut(s) | 60, 415, 1426, 1911, 2657, 3284 |
| ApoI | RAATTY | 8 cut(s) | 772, 834, 1098, 2066, 2262, 2597, 2837, 3198 |
| AseI | ATTAAT | 2 cut(s) | 1329, 3246 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 805 |
| AspLEI | GCGC | 5 cut(s) | 170, 570, 594, 2490, 3256 |
| AspS9I | GGNCC | 8 cut(s) | 61, 162, 1793, 2126, 2637, 2657, 2735, 3070 |
| AsuC2I | CCSGG | 2 cut(s) | 2783, 3228 |
| AsuHPI | GGTGA | 7 cut(s) | 382, 677, 744, 1610, 2785, 3059, 3110 |
| AsuII | TTCGAA | 1 cut(s) | 263 |
| AvaI | CYCGRG | 1 cut(s) | 2454 |
| AvaII | GGWCC | 6 cut(s) | 162, 1793, 2126, 2637, 2735, 3070 |
| BamHI | GGATCC | 1 cut(s) | 1281 |
| BanI | GGYRCC | 1 cut(s) | 167 |
| BanII | GRGCYC | 3 cut(s) | 949, 2114, 2186 |
| BauI | CACGAG | 1 cut(s) | 2113 |
| BbsI | GAAGAC | 1 cut(s) | 1001 |
| Bbv12I | GWGCWC | 5 cut(s) | 259, 666, 949, 2114, 2186 |
| BccI | CCATC | 8 cut(s) | 779, 1672, 1978, 2318, 2915, 3046, 3089, 3295 |
| BceAI | ACGGC | 2 cut(s) | 430, 3346 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1082, 1116 |
| BciT130I | CCWGG | 7 cut(s) | 457, 483, 1773, 1800, 2664, 3003, 3277 |
| BcnI | CCSGG | 2 cut(s) | 2783, 3228 |
| BcoDI | GTCTC | 8 cut(s) | 52, 505, 607, 930, 1568, 1847, 2263, 2992 |
| BcuI | ACTAGT | 1 cut(s) | 616 |
| BfaI | CTAG | 6 cut(s) | 240, 617, 1230, 1571, 3011, 3401 |
| BfmI | CTRYAG | 3 cut(s) | 2700, 2808, 2847 |
| BfoI | RGCGCY | 2 cut(s) | 171, 571 |
| BglII | AGATCT | 1 cut(s) | 3353 |
| BlpI | GCTNAGC | 2 cut(s) | 201, 3177 |
| Bme1390I | CCNGG | 9 cut(s) | 457, 483, 1773, 1800, 2664, 2783, 3003, 3228, 3277 |
| Bme18I | GGWCC | 6 cut(s) | 162, 1793, 2126, 2637, 2735, 3070 |
| BmeT110I | CYCGRG | 1 cut(s) | 2454 |
| BmgBI | CACGTC | 1 cut(s) | 3103 |
| BmgT120I | GGNCC | 8 cut(s) | 61, 162, 1793, 2126, 2637, 2657, 2735, 3070 |
| BmiI | GGNNCC | 4 cut(s) | 169, 480, 1283, 2128 |
| BmrFI | CCNGG | 9 cut(s) | 457, 483, 1773, 1800, 2664, 2783, 3003, 3228, 3277 |
| BmrI | ACTGGG | 2 cut(s) | 916, 2535 |
| BmsI | GCATC | 7 cut(s) | 968, 1177, 1288, 2974, 3163, 3241, 3367 |
| BmuI | ACTGGG | 2 cut(s) | 916, 2535 |
| BpiI | GAAGAC | 1 cut(s) | 1001 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 110, 142, 385, 417, 648, 680 |
| BpmI | CTGGAG | 4 cut(s) | 62, 137, 2493, 2898 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2739 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 201, 3177 |
| Bpu14I | TTCGAA | 1 cut(s) | 263 |
| BpuEI | CTTGAG | 3 cut(s) | 168, 1120, 1690 |
| BpuMI | CCSGG | 2 cut(s) | 2783, 3228 |
| BsaAI | YACGTR | 1 cut(s) | 1873 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2722 |
| BsaHI | GRCGYC | 2 cut(s) | 168, 2493 |
| BsaI | GGTCTC | 1 cut(s) | 2992 |
| Bse118I | RCCGGY | 1 cut(s) | 1130 |
| Bse3DI | GCAATG | 4 cut(s) | 396, 988, 2466, 2569 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2722 |
| BseBI | CCWGG | 7 cut(s) | 457, 483, 1773, 1800, 2664, 3003, 3277 |
| BseJI | GATNNNNATC | 1 cut(s) | 2722 |
| BseMI | GCAATG | 4 cut(s) | 396, 988, 2466, 2569 |
| BseRI | GAGGAG | 4 cut(s) | 118, 121, 1259, 1412 |
| BseX3I | CGGCCG | 1 cut(s) | 415 |
| BsgI | GTGCAG | 1 cut(s) | 2973 |
| Bsh1236I | CGCG | 1 cut(s) | 2490 |
| Bsh1285I | CGRYCG | 2 cut(s) | 418, 1131 |
| BshFI | GGCC | 6 cut(s) | 62, 417, 1428, 1913, 2659, 3286 |
| BshNI | GGYRCC | 1 cut(s) | 167 |
| BsiEI | CGRYCG | 2 cut(s) | 418, 1131 |
| BsiHKAI | GWGCWC | 5 cut(s) | 259, 666, 949, 2114, 2186 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2454 |
| BsiSI | CCGG | 4 cut(s) | 165, 1131, 2782, 3227 |
| BslFI | GGGAC | 5 cut(s) | 499, 1634, 1696, 2112, 2546 |
| BsmAI | GTCTC | 8 cut(s) | 52, 505, 607, 930, 1568, 1847, 2263, 2992 |
| BsmBI | CGTCTC | 3 cut(s) | 52, 505, 2263 |
| BsmFI | GGGAC | 5 cut(s) | 499, 1634, 1696, 2112, 2546 |
| BsmI | GAATGC | 4 cut(s) | 594, 955, 1453, 2135 |
| BsnI | GGCC | 6 cut(s) | 62, 417, 1428, 1913, 2659, 3286 |
| Bso31I | GGTCTC | 1 cut(s) | 2992 |
| BsoBI | CYCGRG | 1 cut(s) | 2454 |
| Bsp119I | TTCGAA | 1 cut(s) | 263 |
| Bsp1286I | GDGCHC | 5 cut(s) | 259, 666, 949, 2114, 2186 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 201, 3177 |
| Bsp19I | CCATGG | 1 cut(s) | 1902 |
| BspACI | CCGC | 6 cut(s) | 145, 418, 1425, 2171, 2220, 2635 |
| BspANI | GGCC | 6 cut(s) | 62, 417, 1428, 1913, 2659, 3286 |
| BspFNI | CGCG | 1 cut(s) | 2490 |
| BspLI | GGNNCC | 4 cut(s) | 169, 480, 1283, 2128 |
| BspMAI | CTGCAG | 2 cut(s) | 2704, 2812 |
| BspPI | GGATC | 6 cut(s) | 596, 1276, 1289, 1595, 2038, 3218 |
| BspQI | GCTCTTC | 3 cut(s) | 2102, 2191, 3168 |
| BspT104I | TTCGAA | 1 cut(s) | 263 |
| BspT107I | GGYRCC | 1 cut(s) | 167 |
| BspTNI | GGTCTC | 1 cut(s) | 2992 |
| BsrBI | CCGCTC | 1 cut(s) | 2222 |
| BsrDI | GCAATG | 4 cut(s) | 396, 988, 2466, 2569 |
| BsrFI | RCCGGY | 1 cut(s) | 1130 |
| BssAI | RCCGGY | 1 cut(s) | 1130 |
| BssNAI | GTATAC | 1 cut(s) | 2168 |
| BssNI | GRCGYC | 2 cut(s) | 168, 2493 |
| BssSI | CACGAG | 1 cut(s) | 2113 |
| BssT1I | CCWWGG | 3 cut(s) | 1335, 1491, 1902 |
| Bst1107I | GTATAC | 1 cut(s) | 2168 |
| Bst2BI | CACGAG | 1 cut(s) | 2113 |
| Bst2UI | CCWGG | 7 cut(s) | 457, 483, 1773, 1800, 2664, 3003, 3277 |
| Bst4CI | ACNGT | 7 cut(s) | 41, 523, 1831, 2368, 2994, 3070, 3369 |
| Bst6I | CTCTTC | 7 cut(s) | 57, 726, 933, 2020, 2102, 2191, 3168 |
| BstACI | GRCGYC | 2 cut(s) | 168, 2493 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 353 |
| BstBAI | YACGTR | 1 cut(s) | 1873 |
| BstBI | TTCGAA | 1 cut(s) | 263 |
| BstC8I | GCNNGC | 4 cut(s) | 345, 2220, 2775, 3183 |
| BstDSI | CCRYGG | 1 cut(s) | 1902 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 454 |
| BstFNI | CGCG | 1 cut(s) | 2490 |
| BstH2I | RGCGCY | 2 cut(s) | 171, 571 |
| BstHHI | GCGC | 5 cut(s) | 170, 570, 594, 2490, 3256 |
| BstMAI | GTCTC | 8 cut(s) | 52, 505, 607, 930, 1568, 1847, 2263, 2992 |
| BstMCI | CGRYCG | 2 cut(s) | 418, 1131 |
| BstNI | CCWGG | 7 cut(s) | 457, 483, 1773, 1800, 2664, 3003, 3277 |
| BstNSI | RCATGY | 4 cut(s) | 911, 1120, 1508, 1781 |
| BstSCI | CCNGG | 9 cut(s) | 455, 481, 1771, 1798, 2662, 2781, 3001, 3226, 3275 |
| BstSFI | CTRYAG | 3 cut(s) | 2700, 2808, 2847 |
| BstUI | CGCG | 1 cut(s) | 2490 |
| BstV2I | GAAGAC | 1 cut(s) | 1001 |
| BstX2I | RGATCY | 4 cut(s) | 601, 1281, 2030, 3353 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 463 |
| BstYI | RGATCY | 4 cut(s) | 601, 1281, 2030, 3353 |
| BstZ17I | GTATAC | 1 cut(s) | 2168 |
| BstZI | CGGCCG | 1 cut(s) | 415 |
| BsuRI | GGCC | 6 cut(s) | 62, 417, 1428, 1913, 2659, 3286 |
| BtgI | CCRYGG | 1 cut(s) | 1902 |
| BtrI | CACGTC | 1 cut(s) | 3103 |
| BtsI | GCAGTG | 1 cut(s) | 3195 |
| BtsIMutI | CAGTG | 4 cut(s) | 900, 2990, 3089, 3195 |
| Cac8I | GCNNGC | 4 cut(s) | 345, 2220, 2775, 3183 |
| CaiI | CAGNNNCTG | 4 cut(s) | 147, 353, 488, 2908 |
| CfoI | GCGC | 5 cut(s) | 170, 570, 594, 2490, 3256 |
| Cfr10I | RCCGGY | 1 cut(s) | 1130 |
| Cfr13I | GGNCC | 8 cut(s) | 61, 162, 1793, 2126, 2637, 2657, 2735, 3070 |
| CseI | GACGC | 1 cut(s) | 522 |
| CsiI | ACCWGGT | 1 cut(s) | 3001 |
| Csp6I | GTAC | 1 cut(s) | 1406 |
| CviQI | GTAC | 1 cut(s) | 1406 |
| DinI | GGCGCC | 1 cut(s) | 169 |
| DraI | TTTAAA | 2 cut(s) | 972, 1704 |
| DraIII | CACNNNGTG | 1 cut(s) | 2240 |
| EaeI | YGGCCR | 1 cut(s) | 415 |
| EagI | CGGCCG | 1 cut(s) | 415 |
| Eam1104I | CTCTTC | 7 cut(s) | 57, 726, 933, 2020, 2102, 2191, 3168 |
| EarI | CTCTTC | 7 cut(s) | 57, 726, 933, 2020, 2102, 2191, 3168 |
| Ecl136II | GAGCTC | 3 cut(s) | 947, 2112, 2184 |
| EclXI | CGGCCG | 1 cut(s) | 415 |
| Eco130I | CCWWGG | 3 cut(s) | 1335, 1491, 1902 |
| Eco147I | AGGCCT | 1 cut(s) | 1913 |
| Eco24I | GRGCYC | 3 cut(s) | 949, 2114, 2186 |
| Eco31I | GGTCTC | 1 cut(s) | 2992 |
| Eco32I | GATATC | 2 cut(s) | 2296, 3061 |
| Eco47I | GGWCC | 6 cut(s) | 162, 1793, 2126, 2637, 2735, 3070 |
| Eco52I | CGGCCG | 1 cut(s) | 415 |
| Eco53kI | GAGCTC | 3 cut(s) | 947, 2112, 2184 |
| Eco57I | CTGAAG | 6 cut(s) | 510, 707, 1610, 2001, 2172, 2751 |
| Eco88I | CYCGRG | 1 cut(s) | 2454 |
| EcoICRI | GAGCTC | 3 cut(s) | 947, 2112, 2184 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 454 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2735 |
| EcoRII | CCWGG | 7 cut(s) | 455, 481, 1771, 1798, 2662, 3001, 3275 |
| EcoRV | GATATC | 2 cut(s) | 2296, 3061 |
| EcoT14I | CCWWGG | 3 cut(s) | 1335, 1491, 1902 |
| EcoT22I | ATGCAT | 1 cut(s) | 1519 |
| EcoT38I | GRGCYC | 3 cut(s) | 949, 2114, 2186 |
| EgeI | GGCGCC | 1 cut(s) | 169 |
| EheI | GGCGCC | 1 cut(s) | 169 |
| ErhI | CCWWGG | 3 cut(s) | 1335, 1491, 1902 |
| Esp3I | CGTCTC | 3 cut(s) | 52, 505, 2263 |
| FaqI | GGGAC | 5 cut(s) | 499, 1634, 1696, 2112, 2546 |
| FauI | CCCGC | 1 cut(s) | 2227 |
| FauNDI | CATATG | 3 cut(s) | 1198, 1519, 2338 |
| FblI | GTMKAC | 3 cut(s) | 2167, 2968, 3266 |
| FriOI | GRGCYC | 3 cut(s) | 949, 2114, 2186 |
| FspAI | RTGCGCAY | 1 cut(s) | 3255 |
| FspBI | CTAG | 6 cut(s) | 240, 617, 1230, 1571, 3011, 3401 |
| FspI | TGCGCA | 2 cut(s) | 593, 3255 |
| GlaI | GCGC | 5 cut(s) | 169, 569, 593, 2489, 3255 |
| GsuI | CTGGAG | 4 cut(s) | 62, 137, 2493, 2898 |
| HaeII | RGCGCY | 2 cut(s) | 171, 571 |
| HaeIII | GGCC | 6 cut(s) | 62, 417, 1428, 1913, 2659, 3286 |
| HapII | CCGG | 4 cut(s) | 165, 1131, 2782, 3227 |
| HgaI | GACGC | 1 cut(s) | 522 |
| HhaI | GCGC | 5 cut(s) | 170, 570, 594, 2490, 3256 |
| Hin1I | GRCGYC | 2 cut(s) | 168, 2493 |
| Hin6I | GCGC | 5 cut(s) | 168, 568, 592, 2488, 3254 |
| HinP1I | GCGC | 5 cut(s) | 168, 568, 592, 2488, 3254 |
| HincII | GTYRAC | 4 cut(s) | 526, 1167, 1725, 2554 |
| HindII | GTYRAC | 4 cut(s) | 526, 1167, 1725, 2554 |
| HpaI | GTTAAC | 1 cut(s) | 1725 |
| HpaII | CCGG | 4 cut(s) | 165, 1131, 2782, 3227 |
| HphI | GGTGA | 7 cut(s) | 382, 677, 744, 1610, 2785, 3059, 3110 |
| Hpy99I | CGWCG | 3 cut(s) | 91, 2495, 2540 |
| HpyCH4III | ACNGT | 7 cut(s) | 41, 523, 1831, 2368, 2994, 3070, 3369 |
| HpyCH4IV | ACGT | 8 cut(s) | 45, 1698, 1872, 2239, 2272, 2493, 2538, 3102 |
| HpySE526I | ACGT | 8 cut(s) | 45, 1698, 1872, 2239, 2272, 2493, 2538, 3102 |
| Hsp92I | GRCGYC | 2 cut(s) | 168, 2493 |
| HspAI | GCGC | 5 cut(s) | 168, 568, 592, 2488, 3254 |
| KasI | GGCGCC | 1 cut(s) | 167 |
| KspAI | GTTAAC | 1 cut(s) | 1725 |
| LguI | GCTCTTC | 3 cut(s) | 2102, 2191, 3168 |
| LmnI | GCTCC | 6 cut(s) | 118, 508, 1972, 2227, 2512, 2626 |
| LweI | GCATC | 7 cut(s) | 968, 1177, 1288, 2974, 3163, 3241, 3367 |
| MabI | ACCWGGT | 1 cut(s) | 3001 |
| MaeI | CTAG | 6 cut(s) | 240, 617, 1230, 1571, 3011, 3401 |
| MaeII | ACGT | 8 cut(s) | 45, 1698, 1872, 2239, 2272, 2493, 2538, 3102 |
| MaeIII | GTNAC | 8 cut(s) | 41, 268, 286, 1014, 1153, 2494, 2881, 3098 |
| MbiI | CCGCTC | 1 cut(s) | 2222 |
| MfeI | CAATTG | 5 cut(s) | 291, 867, 1578, 1686, 2213 |
| MflI | RGATCY | 4 cut(s) | 601, 1281, 2030, 3353 |
| MhlI | GDGCHC | 5 cut(s) | 259, 666, 949, 2114, 2186 |
| Mly113I | GGCGCC | 1 cut(s) | 168 |
| MlyI | GAGTC | 1 cut(s) | 2015 |
| MmeI | TCCRAC | 3 cut(s) | 849, 2501, 3036 |
| Mph1103I | ATGCAT | 1 cut(s) | 1519 |
| MroXI | GAANNNNTTC | 1 cut(s) | 805 |
| MslI | CAYNNNNRTG | 1 cut(s) | 627 |
| MspA1I | CMGCKG | 1 cut(s) | 147 |
| MspI | CCGG | 4 cut(s) | 165, 1131, 2782, 3227 |
| MspR9I | CCNGG | 9 cut(s) | 457, 483, 1773, 1800, 2664, 2783, 3003, 3228, 3277 |
| MunI | CAATTG | 5 cut(s) | 291, 867, 1578, 1686, 2213 |
| Mva1269I | GAATGC | 4 cut(s) | 594, 955, 1453, 2135 |
| MvaI | CCWGG | 7 cut(s) | 457, 483, 1773, 1800, 2664, 3003, 3277 |
| MvnI | CGCG | 1 cut(s) | 2490 |
| NarI | GGCGCC | 1 cut(s) | 168 |
| NciI | CCSGG | 2 cut(s) | 2783, 3228 |
| NcoI | CCATGG | 1 cut(s) | 1902 |
| NdeI | CATATG | 3 cut(s) | 1198, 1519, 2338 |
| NlaIV | GGNNCC | 4 cut(s) | 169, 480, 1283, 2128 |
| NmuCI | GTSAC | 5 cut(s) | 268, 286, 1014, 2494, 3098 |
| NsbI | TGCGCA | 2 cut(s) | 593, 3255 |
| NsiI | ATGCAT | 1 cut(s) | 1519 |
| NspI | RCATGY | 4 cut(s) | 911, 1120, 1508, 1781 |
| NspV | TTCGAA | 1 cut(s) | 263 |
| OliI | CACNNNNGTG | 1 cut(s) | 627 |
| PceI | AGGCCT | 1 cut(s) | 1913 |
| PciI | ACATGT | 1 cut(s) | 1777 |
| PciSI | GCTCTTC | 3 cut(s) | 2102, 2191, 3168 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 269 |
| PctI | GAATGC | 4 cut(s) | 594, 955, 1453, 2135 |
| PdmI | GAANNNNTTC | 1 cut(s) | 805 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2516, 3095 |
| PfoI | TCCNGGA | 1 cut(s) | 2781 |
| PleI | GAGTC | 1 cut(s) | 2015 |
| PluTI | GGCGCC | 1 cut(s) | 171 |
| PpsI | GAGTC | 1 cut(s) | 2015 |
| Ppu21I | YACGTR | 1 cut(s) | 1873 |
| PpuMI | RGGWCCY | 1 cut(s) | 2735 |
| PscI | ACATGT | 1 cut(s) | 1777 |
| PshBI | ATTAAT | 2 cut(s) | 1329, 3246 |
| Psp124BI | GAGCTC | 3 cut(s) | 949, 2114, 2186 |
| Psp5II | RGGWCCY | 1 cut(s) | 2735 |
| Psp6I | CCWGG | 7 cut(s) | 455, 481, 1771, 1798, 2662, 3001, 3275 |
| PspGI | CCWGG | 7 cut(s) | 455, 481, 1771, 1798, 2662, 3001, 3275 |
| PspN4I | GGNNCC | 4 cut(s) | 169, 480, 1283, 2128 |
| PspPI | GGNCC | 8 cut(s) | 61, 162, 1793, 2126, 2637, 2657, 2735, 3070 |
| PspPPI | RGGWCCY | 1 cut(s) | 2735 |
| PstI | CTGCAG | 2 cut(s) | 2704, 2812 |
| PstNI | CAGNNNCTG | 4 cut(s) | 147, 353, 488, 2908 |
| PsuI | RGATCY | 4 cut(s) | 601, 1281, 2030, 3353 |
| RsaI | GTAC | 1 cut(s) | 1407 |
| RsaNI | GTAC | 1 cut(s) | 1406 |
| RseI | CAYNNNNRTG | 1 cut(s) | 627 |
| SacI | GAGCTC | 3 cut(s) | 949, 2114, 2186 |
| SapI | GCTCTTC | 3 cut(s) | 2102, 2191, 3168 |
| Sau96I | GGNCC | 8 cut(s) | 61, 162, 1793, 2126, 2637, 2657, 2735, 3070 |
| SchI | GAGTC | 1 cut(s) | 2015 |
| ScrFI | CCNGG | 9 cut(s) | 457, 483, 1773, 1800, 2664, 2783, 3003, 3228, 3277 |
| SduI | GDGCHC | 5 cut(s) | 259, 666, 949, 2114, 2186 |
| SexAI | ACCWGGT | 1 cut(s) | 3001 |
| SfaNI | GCATC | 7 cut(s) | 968, 1177, 1288, 2974, 3163, 3241, 3367 |
| SfcI | CTRYAG | 3 cut(s) | 2700, 2808, 2847 |
| SfoI | GGCGCC | 1 cut(s) | 169 |
| SfuI | TTCGAA | 1 cut(s) | 263 |
| SinI | GGWCC | 6 cut(s) | 162, 1793, 2126, 2637, 2735, 3070 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 627 |
| SmlI | CTYRAG | 3 cut(s) | 183, 1135, 1669 |
| SmoI | CTYRAG | 3 cut(s) | 183, 1135, 1669 |
| SpeI | ACTAGT | 1 cut(s) | 616 |
| SseBI | AGGCCT | 1 cut(s) | 1913 |
| SsiI | CCGC | 6 cut(s) | 145, 418, 1425, 2171, 2220, 2635 |
| SspDI | GGCGCC | 1 cut(s) | 167 |
| SspI | AATATT | 1 cut(s) | 2093 |
| SspMI | CTAG | 6 cut(s) | 240, 617, 1230, 1571, 3011, 3401 |
| SstI | GAGCTC | 3 cut(s) | 949, 2114, 2186 |
| StuI | AGGCCT | 1 cut(s) | 1913 |
| StyD4I | CCNGG | 9 cut(s) | 455, 481, 1771, 1798, 2662, 2781, 3001, 3226, 3275 |
| StyI | CCWWGG | 3 cut(s) | 1335, 1491, 1902 |
| TaaI | ACNGT | 7 cut(s) | 41, 523, 1831, 2368, 2994, 3070, 3369 |
| TaiI | ACGT | 8 cut(s) | 48, 1701, 1875, 2242, 2275, 2496, 2541, 3105 |
| TaqI | TCGA | 7 cut(s) | 263, 1086, 1431, 1845, 2147, 2199, 2358 |
| TaqII | GACCGA | 1 cut(s) | 3146 |
| TauI | GCSGC | 3 cut(s) | 147, 420, 1428 |
| TscAI | CASTG | 4 cut(s) | 900, 2997, 3096, 3195 |
| TseFI | GTSAC | 5 cut(s) | 268, 286, 1014, 2494, 3098 |
| Tsp45I | GTSAC | 5 cut(s) | 268, 286, 1014, 2494, 3098 |
| TspGWI | ACGGA | 1 cut(s) | 3280 |
| TspRI | CASTG | 4 cut(s) | 900, 2997, 3096, 3195 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2516, 3095 |
| VpaK11BI | GGWCC | 6 cut(s) | 162, 1793, 2126, 2637, 2735, 3070 |
| VspI | ATTAAT | 2 cut(s) | 1329, 3246 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 454 |
| XapI | RAATTY | 8 cut(s) | 772, 834, 1098, 2066, 2262, 2597, 2837, 3198 |
| XbaI | TCTAGA | 1 cut(s) | 1570 |
| XceI | RCATGY | 4 cut(s) | 911, 1120, 1508, 1781 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 463 |
| XmiI | GTMKAC | 3 cut(s) | 2167, 2968, 3266 |
| XmnI | GAANNNNTTC | 1 cut(s) | 805 |
| XspI | CTAG | 6 cut(s) | 240, 617, 1230, 1571, 3011, 3401 |
| ZraI | GACGTC | 1 cut(s) | 2494 |
| Zsp2I | ATGCAT | 1 cut(s) | 1519 |