Prupe.4G136300_v2.0.a1
MYB Family

Myb-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0011541
Physical Location & Seq
Reverse (-)
7546379 .. 7549529
3151 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G136300.1

Sequence Viewer

Length: 1101 bp
ATGGGGAAGGGAAGAACACCATGTTGTGATAAGAACCAAGTGAAGAGGGGTCCTTGGAGCCCTGCTGAGGACTTGAGGCTTATAACTTTCATTCAGAAGAATGGCCATGACAACTGGAGGGCTCTCCCTAAGCAAGCAGGTTTGCTGAGATGTGGCAAAAGTTGCCGTTTGAGATGGATTAATTACCTCAGGCCTGATCTCAAGCGAGGGAACTTCACCAGAGAGGAAGAGGACTCCATAATTAGGCTGCATGAAGCCTGGGGAAACAAGTGGTCCAAAATTGCATCCCAGTTTCCAGGAAGAACAGATAATGAGATTAAGAATGTGTGGAACACTCATCTGAAGAAAAAATTGGGTTTCAAGAACTCTGAATTTTGTGGAGAAGAATCAAAGGAGTTATCTTCTATAACCTCCTCTTCCTCATCATCTTCCTCTAGTGCTTCATTTTTGTCTGGTGGAAAACCAAGTGTTGCAGGAGAGCTTGAGCATCAATCACCTGACCAAGAAACTAGCATGGCCAACAACAACCCTCATCATGATCCATGCATTTTGACAATTCCAGAGGAGATTGATCTGGATTCTCCAATGGAATTAATAAATCAATTTAGGCCTGATCCCAAGGACTTGAAAGAGTTGACCAGCTCTTCTGTTTCCTCCAATGAATCAAATGGCTCAAGTTCCAGCCAACTTGATATTTCAAGGCCATCAGAAGAGCAAATGGATTTTCTGTTTGACTTTTCAGAACCTAATTATGATATTCCATTGGAGCCTGACTCTGACTTTTGGAACATGTTTGATGTTCCATTAGTGCCATTTCAGTCAAGTGAAGTCCAATTAAATCAGGCTGAGGCTTCCAAGAGTTCAAACTATGGACAACATGAAAATGAGAAGTGGCTTAGTTACTTGGAAAGTGAGCTTGGACTGGATCAGCCAACTGCAGATAGTACTGGCCAGGAGTTTTTAGCACAGGTCACAACTGGACAATTACTCCCAGAGACCTTTCAGTGTGATAAAATGCCAAACCCTGCTGCAGAGTTTGATCAGAGCTTGGATTACTTTCAAATGTGGCCTTCTTTGCCACACAACAATTCCTCCATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000160 GO:0000302 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0002218 GO:0002237 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006725 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009267 GO:0009314 GO:0009411 GO:0009416 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009642 GO:0009646 GO:0009682 GO:0009698 GO:0009699 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0009753 GO:0009755 GO:0009808 GO:0009809 GO:0009866 GO:0009873 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010043 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0014070 GO:0019219 GO:0019222 GO:0019438 GO:0019748 GO:0023052 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031349 GO:0031667 GO:0031668 GO:0031669 GO:0032502 GO:0032870 GO:0033554 GO:0034599 GO:0034614 GO:0035556 GO:0035690 GO:0042221 GO:0042493 GO:0042592 GO:0042594 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044087 GO:0044212 GO:0044237 GO:0044249 GO:0044424 GO:0044464 GO:0044550 GO:0045087 GO:0045088 GO:0045089 GO:0045893 GO:0045935 GO:0046677 GO:0046686 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048869 GO:0048878 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051365 GO:0051704 GO:0051707 GO:0051716 GO:0055065 GO:0055080 GO:0060255 GO:0065007 GO:0065008 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071369 GO:0071495 GO:0071496 GO:0071704 GO:0071731 GO:0071732 GO:0080090 GO:0080134 GO:0097159 GO:0097366 GO:0097501 GO:0098542 GO:0098771 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902170 GO:1902680 GO:1903338 GO:1903506 GO:1903508 GO:1990359 GO:1990532 GO:1990641 GO:2000112 GO:2000652 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

367

Amino Acids

41.29

Weight (kDa)

4.83

Isoelectric Point (pI)

56.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 83
Acc36I ACCTGC 1 cut(s) 128
AclWI GGATC 3 cut(s) 533, 608, 933
AcoI YGGCCR 3 cut(s) 103, 516, 949
AcsI RAATTY 1 cut(s) 371
AcuI CTGAAG 1 cut(s) 362
AfaI GTAC 1 cut(s) 946
AfiI CCNNNNNNNGG 2 cut(s) 67, 243
AflIII ACRYGT 1 cut(s) 789
AgsI TTSAA 5 cut(s) 361, 628, 699, 864, 1061
AjnI CCWGG 3 cut(s) 257, 295, 951
AjuI GAANNNNNNNTTGG 4 cut(s) 335, 367, 900, 932
AluBI AGCT 4 cut(s) 481, 642, 916, 1047
AluI AGCT 4 cut(s) 481, 642, 916, 1047
Alw26I GTCTC 1 cut(s) 989
AlwI GGATC 3 cut(s) 533, 608, 933
AoxI GGCC 7 cut(s) 103, 191, 516, 608, 701, 949, 1067
ApeKI GCWGC 2 cut(s) 247, 1028
ApoI RAATTY 1 cut(s) 371
AseI ATTAAT 2 cut(s) 180, 593
AspS9I GGNCC 2 cut(s) 50, 273
AsuHPI GGTGA 2 cut(s) 208, 486
AvaII GGWCC 2 cut(s) 50, 273
AxyI CCTNAGG 1 cut(s) 188
BalI TGGCCA 3 cut(s) 105, 518, 951
BanII GRGCYC 2 cut(s) 62, 124
BbvCI CCTCAGC 2 cut(s) 66, 846
BbvI GCAGC 2 cut(s) 234, 1015
BccI CCATC 2 cut(s) 168, 712
BceAI ACGGC 1 cut(s) 150
BciT130I CCWGG 3 cut(s) 259, 297, 953
BclI TGATCA 1 cut(s) 1039
BcoDI GTCTC 1 cut(s) 989
BfaI CTAG 2 cut(s) 435, 510
BfmI CTRYAG 2 cut(s) 936, 1029
BfuAI ACCTGC 1 cut(s) 128
BisI GCNGC 2 cut(s) 248, 1029
BlsI GCNGC 2 cut(s) 249, 1030
BmcAI AGTACT 1 cut(s) 946
Bme1390I CCNGG 3 cut(s) 259, 297, 953
Bme18I GGWCC 2 cut(s) 50, 273
BmgT120I GGNCC 2 cut(s) 50, 273
BmiI GGNNCC 3 cut(s) 51, 59, 768
BmrFI CCNGG 3 cut(s) 259, 297, 953
BmrI ACTGGG 1 cut(s) 283
BmsI GCATC 2 cut(s) 293, 496
BmuI ACTGGG 1 cut(s) 283
BplI GAGNNNNNCTC 2 cut(s) 758, 790
BpmI CTGGAG 1 cut(s) 136
Bpu10I CCTNAGC 3 cut(s) 66, 129, 846
BpuEI CTTGAG 4 cut(s) 94, 185, 503, 658
BsaI GGTCTC 1 cut(s) 989
BsaJI CCNNGG 3 cut(s) 53, 258, 618
BsaXI ACNNNNNCTCC 3 cut(s) 972, 1002, 1076
Bsc4I CCNNNNNNNGG 2 cut(s) 67, 243
Bse1I ACTGG 5 cut(s) 119, 289, 927, 952, 982
Bse21I CCTNAGG 1 cut(s) 188
BseBI CCWGG 3 cut(s) 259, 297, 953
BseDI CCNNGG 3 cut(s) 53, 258, 618
BseGI GGATG 1 cut(s) 284
BseLI CCNNNNNNNGG 2 cut(s) 67, 243
BseMII CTCAG 4 cut(s) 57, 137, 202, 837
BseNI ACTGG 5 cut(s) 119, 289, 927, 952, 982
BseRI GAGGAG 2 cut(s) 403, 578
BseXI GCAGC 2 cut(s) 234, 1015
BshFI GGCC 7 cut(s) 105, 193, 518, 610, 703, 951, 1069
BslI CCNNNNNNNGG 2 cut(s) 67, 243
BsmAI GTCTC 1 cut(s) 989
BsnI GGCC 7 cut(s) 105, 193, 518, 610, 703, 951, 1069
Bso31I GGTCTC 1 cut(s) 989
Bsp1286I GDGCHC 2 cut(s) 62, 124
Bsp143I GATC 6 cut(s) 196, 538, 571, 613, 925, 1039
BspANI GGCC 7 cut(s) 105, 193, 518, 610, 703, 951, 1069
BspCNI CTCAG 4 cut(s) 58, 138, 201, 838
BspHI TCATGA 1 cut(s) 535
BspLI GGNNCC 3 cut(s) 51, 59, 768
BspMAI CTGCAG 2 cut(s) 940, 1033
BspMI ACCTGC 1 cut(s) 128
BspPI GGATC 3 cut(s) 533, 608, 933
BspQI GCTCTTC 2 cut(s) 649, 705
BspTNI GGTCTC 1 cut(s) 989
BsrI ACTGG 5 cut(s) 119, 289, 927, 952, 982
BssECI CCNNGG 3 cut(s) 53, 258, 618
BssMI GATC 6 cut(s) 196, 538, 571, 613, 925, 1039
BssT1I CCWWGG 2 cut(s) 53, 618
Bst2UI CCWGG 3 cut(s) 259, 297, 953
Bst6I CTCTTC 5 cut(s) 38, 222, 421, 649, 705
BstAPI GCANNNNNTGC 1 cut(s) 162
BstC8I GCNNGC 1 cut(s) 135
BstDEI CTNAG 6 cut(s) 66, 129, 146, 188, 846, 896
BstF5I GGATG 1 cut(s) 284
BstKTI GATC 6 cut(s) 199, 541, 574, 616, 928, 1042
BstMAI GTCTC 1 cut(s) 989
BstMBI GATC 6 cut(s) 196, 538, 571, 613, 925, 1039
BstMWI GCNNNNNNNGC 2 cut(s) 162, 1075
BstNI CCWGG 3 cut(s) 259, 297, 953
BstNSI RCATGY 1 cut(s) 793
BstSCI CCNGG 3 cut(s) 257, 295, 951
BstSFI CTRYAG 2 cut(s) 936, 1029
BstV1I GCAGC 2 cut(s) 234, 1015
Bsu36I CCTNAGG 1 cut(s) 188
BsuRI GGCC 7 cut(s) 105, 193, 518, 610, 703, 951, 1069
BtsCI GGATG 1 cut(s) 284
BtsIMutI CAGTG 1 cut(s) 1010
BveI ACCTGC 1 cut(s) 128
Cac8I GCNNGC 1 cut(s) 135
CciI TCATGA 1 cut(s) 535
Cfr13I GGNCC 2 cut(s) 50, 273
Csp6I GTAC 1 cut(s) 945
CviAII CATG 8 cut(s) 21, 107, 251, 514, 536, 543, 790, 878
CviQI GTAC 1 cut(s) 945
DdeI CTNAG 6 cut(s) 66, 129, 146, 188, 846, 896
DpnI GATC 6 cut(s) 198, 540, 573, 615, 927, 1041
DpnII GATC 6 cut(s) 196, 538, 571, 613, 925, 1039
EaeI YGGCCR 3 cut(s) 103, 516, 949
Eam1104I CTCTTC 5 cut(s) 38, 222, 421, 649, 705
EarI CTCTTC 5 cut(s) 38, 222, 421, 649, 705
Eco130I CCWWGG 2 cut(s) 53, 618
Eco147I AGGCCT 2 cut(s) 193, 610
Eco24I GRGCYC 2 cut(s) 62, 124
Eco31I GGTCTC 1 cut(s) 989
Eco47I GGWCC 2 cut(s) 50, 273
Eco57I CTGAAG 1 cut(s) 362
Eco81I CCTNAGG 1 cut(s) 188
EcoO109I RGGNCCY 1 cut(s) 50
EcoRII CCWGG 3 cut(s) 257, 295, 951
EcoT14I CCWWGG 2 cut(s) 53, 618
EcoT22I ATGCAT 1 cut(s) 548
EcoT38I GRGCYC 2 cut(s) 62, 124
ErhI CCWWGG 2 cut(s) 53, 618
FaeI CATG 8 cut(s) 24, 110, 254, 517, 539, 546, 793, 881
FatI CATG 8 cut(s) 20, 106, 250, 513, 535, 542, 789, 877
FbaI TGATCA 1 cut(s) 1039
Fnu4HI GCNGC 2 cut(s) 248, 1029
FokI GGATG 1 cut(s) 271
FriOI GRGCYC 2 cut(s) 62, 124
Fsp4HI GCNGC 2 cut(s) 248, 1029
FspBI CTAG 2 cut(s) 435, 510
GluI GCNGC 2 cut(s) 248, 1029
GsuI CTGGAG 1 cut(s) 136
HaeIII GGCC 7 cut(s) 105, 193, 518, 610, 703, 951, 1069
Hin1II CATG 8 cut(s) 24, 110, 254, 517, 539, 546, 793, 881
HincII GTYRAC 1 cut(s) 636
HindII GTYRAC 1 cut(s) 636
HinfI GANTC 5 cut(s) 233, 386, 578, 662, 773
HphI GGTGA 2 cut(s) 208, 486
Hpy166II GTNNAC 1 cut(s) 636
Hpy188I TCNGA 7 cut(s) 96, 342, 370, 709, 742, 778, 1044
Hpy188III TCNNGA 4 cut(s) 361, 536, 560, 575
Hpy8I GTNNAC 1 cut(s) 636
HpyAV CCTTC 1 cut(s) 1080
HpyCH4V TGCA 6 cut(s) 250, 284, 473, 546, 938, 1031
HpyF10VI GCNNNNNNNGC 2 cut(s) 162, 1075
HpyF3I CTNAG 6 cut(s) 66, 129, 146, 188, 846, 896
Hsp92II CATG 8 cut(s) 24, 110, 254, 517, 539, 546, 793, 881
Ksp22I TGATCA 1 cut(s) 1039
Kzo9I GATC 6 cut(s) 196, 538, 571, 613, 925, 1039
LguI GCTCTTC 2 cut(s) 649, 705
LmnI GCTCC 2 cut(s) 57, 766
Lsp1109I GCAGC 2 cut(s) 234, 1015
LweI GCATC 2 cut(s) 293, 496
MaeI CTAG 2 cut(s) 435, 510
MaeIII GTNAC 2 cut(s) 899, 970
MalI GATC 6 cut(s) 198, 540, 573, 615, 927, 1041
MboI GATC 6 cut(s) 196, 538, 571, 613, 925, 1039
MhlI GDGCHC 2 cut(s) 62, 124
MlsI TGGCCA 3 cut(s) 105, 518, 951
MluNI TGGCCA 3 cut(s) 105, 518, 951
MlyI GAGTC 2 cut(s) 227, 767
Mox20I TGGCCA 3 cut(s) 105, 518, 951
Mph1103I ATGCAT 1 cut(s) 548
MscI TGGCCA 3 cut(s) 105, 518, 951
MseI TTAA 5 cut(s) 180, 318, 593, 836, 1099
MslI CAYNNNNRTG 1 cut(s) 882
Msp20I TGGCCA 3 cut(s) 105, 518, 951
MspR9I CCNGG 3 cut(s) 259, 297, 953
MvaI CCWGG 3 cut(s) 259, 297, 953
MwoI GCNNNNNNNGC 2 cut(s) 162, 1075
NdeII GATC 6 cut(s) 196, 538, 571, 613, 925, 1039
NlaIII CATG 8 cut(s) 24, 110, 254, 517, 539, 546, 793, 881
NlaIV GGNNCC 3 cut(s) 51, 59, 768
NmuCI GTSAC 1 cut(s) 970
NsiI ATGCAT 1 cut(s) 548
NspI RCATGY 1 cut(s) 793
PagI TCATGA 1 cut(s) 535
PceI AGGCCT 2 cut(s) 193, 610
PciI ACATGT 1 cut(s) 789
PciSI GCTCTTC 2 cut(s) 649, 705
PfeI GAWTC 3 cut(s) 386, 578, 662
PfoI TCCNGGA 1 cut(s) 295
PkrI GCNGC 2 cut(s) 249, 1030
PleI GAGTC 2 cut(s) 227, 767
PpsI GAGTC 2 cut(s) 227, 767
PpuMI RGGWCCY 1 cut(s) 50
PscI ACATGT 1 cut(s) 789
PshBI ATTAAT 2 cut(s) 180, 593
PsiI TTATAA 1 cut(s) 83
Psp5II RGGWCCY 1 cut(s) 50
Psp6I CCWGG 3 cut(s) 257, 295, 951
PspGI CCWGG 3 cut(s) 257, 295, 951
PspN4I GGNNCC 3 cut(s) 51, 59, 768
PspPI GGNCC 2 cut(s) 50, 273
PspPPI RGGWCCY 1 cut(s) 50
PstI CTGCAG 2 cut(s) 940, 1033
RsaI GTAC 1 cut(s) 946
RsaNI GTAC 1 cut(s) 945
RseI CAYNNNNRTG 1 cut(s) 882
SapI GCTCTTC 2 cut(s) 649, 705
SaqAI TTAA 5 cut(s) 180, 318, 593, 836, 1099
SatI GCNGC 2 cut(s) 248, 1029
Sau3AI GATC 6 cut(s) 196, 538, 571, 613, 925, 1039
Sau96I GGNCC 2 cut(s) 50, 273
ScaI AGTACT 1 cut(s) 946
SchI GAGTC 2 cut(s) 227, 767
ScrFI CCNGG 3 cut(s) 259, 297, 953
SduI GDGCHC 2 cut(s) 62, 124
SfaNI GCATC 2 cut(s) 293, 496
SfcI CTRYAG 2 cut(s) 936, 1029
SinI GGWCC 2 cut(s) 50, 273
SmiMI CAYNNNNRTG 1 cut(s) 882
SmlI CTYRAG 4 cut(s) 73, 200, 482, 673
SmoI CTYRAG 4 cut(s) 73, 200, 482, 673
SseBI AGGCCT 2 cut(s) 193, 610
SspMI CTAG 2 cut(s) 435, 510
StuI AGGCCT 2 cut(s) 193, 610
StyD4I CCNGG 3 cut(s) 257, 295, 951
StyI CCWWGG 2 cut(s) 53, 618
TatI WGTACW 1 cut(s) 944
TfiI GAWTC 3 cut(s) 386, 578, 662
Tru1I TTAA 5 cut(s) 180, 318, 593, 836, 1099
Tru9I TTAA 5 cut(s) 180, 318, 593, 836, 1099
TscAI CASTG 1 cut(s) 1010
TseFI GTSAC 1 cut(s) 970
TseI GCWGC 2 cut(s) 247, 1028
Tsp45I GTSAC 1 cut(s) 970
TspDTI ATGAA 5 cut(s) 79, 267, 432, 675, 894
TspRI CASTG 1 cut(s) 1010
VpaK11BI GGWCC 2 cut(s) 50, 273
VspI ATTAAT 2 cut(s) 180, 593
XapI RAATTY 1 cut(s) 371
XceI RCATGY 1 cut(s) 793
XspI CTAG 2 cut(s) 435, 510
ZrmI AGTACT 1 cut(s) 946
Zsp2I ATGCAT 1 cut(s) 548
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.