Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0012741

Physical Location & Seq

Genomic Coordinates Reverse (-)

16318997 .. 16324982

Gene Structure 5986 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G245900.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1230 bp

ATGATCCCCAAACGCTCTTTCTGTCTCCCATCGAATCTCTGTCTCCTCTTCCTCTCCAAACCCAAAGCCAGAATAGCATTAGCAGCCATGGCCATCCCTGCTGTACTTGCCATCGTTCCCATTGGCGTTGTTTTCATTCTCTCAGGCCTCATTGTTAATCTCATGCAGGTAGTTTCTTTCATCCTTCTTCGTCCTATATCAAAGAAGTTGTATAGAAAGATCAACAAAGTAGTTGCAGAGTTGCTTTGGTTGGAACTCATATGGCTTATTGATTGGTGGGCAGGCATCAAGGTTGAGTTGTATGTAGATTCAGACACCTTTCAGTTAATGGGTAAAGAACATGCACTTGTCATTTGCAATCACAGAAGTGACATTGATTGGCTTGTTGGATGGCTCGTAGCTCAGCGCTCAGGTTGCCTTGGTAGTGCACTAGCCATCATGAAGAAAGAAGTAATGTTCCTCCCAGTCATAGGTTGGTCAATGTGGTTTTCTGAATATTTCTTCTTGGAAAGAAGATGGACTAAAGATGAAATTACATTGAAGTCAGGTTTTCAACAACTAGAGGATTTCCCCATGCCTTTTTGGTTGGCTCTCTTTGTAGAAGGAACGCGATTTACTCAGGCAAAGCTAATGGTAGCTCAAGAGTTTGCTGCTTCAAGAGGGTTGCCTATTCCTAGGAATGTCTTGCTTCCACGTACAAAGGGTTTTGTTTCATCAGTAAGCCAGATGCGCTCATTTGTTCCAGCAATTTATGATTGTACAGTAGCTGTTCCCAAAAATCAGCCACCGCCTACATTGTTGAGAATATTTCGAGGGCAATCTTCTGTGGTAAAATTACAAATCAGGAGACATTCAATGCAGGAATTGCCCGAAACGGCTGACGGAATTGGACAGTGGTGTAAAGATGTATTTGTTACCAAGGATGCTTTACTGGAGAAGTACTTTGCTAAAGGCACATTCAGTGACCAGCAACTTCAAAACATTGGCAGACCTATGAAGTCCTTAATTGTTGTGTTACTCTGGTCCTGCCTAATTGGCTATGGAATTTTCAAATTCGTTCCATGGTCTTCCCTCCTATCCTCATGGAAAGGCATTGCATTTTCAGCTACTTTCTTGGTCCTTGTTGTAATTGTTATGCAAATCCTCATCCATTCATCTGAATCAGAGCGTTCGACACCGCTCAATATAACCCCACAAGACCAAACCAAGGAGAGACTCGTTCAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003841 GO:0008374 GO:0016411 GO:0016740 GO:0016746 GO:0016747 GO:0042171 GO:0071617

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 ko04072 map00561 map00564 map01100 map01110 map04072

Pfam Domains

Protein Families

Acyltransf_C Acyltransferase

Protein Analysis

410

Amino Acids

46.51

Weight (kDa)

9.61

Isoelectric Point (pI)

46.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012741)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51260
malus_domestica	MD00G1164400.v1.1 MD03G1176900.v1.1
prunus_persica	Prupe.4G245900_v2.0.a1 Prupe.4G245900_v2.0.a1 Prupe.4G245900_v2.0.a1 Prupe.4G245900_v2.0.a1
pyrus_communis	pycom03g13410 pycom11g17030
rosa_chinensis	RchiOBHm_Chr7g0219171
rosa_laevigata	RLG00000002305
rosa_roxburghii	Rroxscaffold_3G00240180
rosa_rugosa	Rorug07G0182800
rosa_samantha	Rh7AG326500 Rh7BG316300 Rh7CG343800 Rh7DG321800
rosa_wichuraiana	Rw7G027500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	157
AccBSI	CCGCTC	1 cut(s)	1180
AccII	CGCG	1 cut(s)	610
AciI	CCGC	2 cut(s)	788, 1178
AcoI	YGGCCR	1 cut(s)	90
AcsI	RAATTY	2 cut(s)	1044, 1052
AfaI	GTAC	4 cut(s)	105, 697, 760, 941
AfeI	AGCGCT	1 cut(s)	407
AfiI	CCNNNNNNNGG	2 cut(s)	470, 1207
AgsI	TTSAA	6 cut(s)	541, 554, 657, 855, 977, 1051
AjuI	GAANNNNNNNTTGG	1 cut(s)	34
AleI	CACNNNNGTG	1 cut(s)	366
AluBI	AGCT	5 cut(s)	401, 628, 638, 767, 1106
AluI	AGCT	5 cut(s)	401, 628, 638, 767, 1106
Alw21I	GWGCWC	1 cut(s)	430
Alw26I	GTCTC	4 cut(s)	29, 47, 841, 1207
Alw44I	GTGCAC	1 cut(s)	426
AlwNI	CAGNNNCTG	1 cut(s)	767
Aor51HI	AGCGCT	1 cut(s)	407
AoxI	GGCC	2 cut(s)	90, 145
ApaLI	GTGCAC	1 cut(s)	426
ApeKI	GCWGC	2 cut(s)	83, 650
ApoI	RAATTY	2 cut(s)	1044, 1052
AspA2I	CCTAGG	1 cut(s)	674
AspLEI	GCGC	2 cut(s)	408, 732
AspS9I	GGNCC	2 cut(s)	1023, 1117
AvaII	GGWCC	2 cut(s)	1023, 1117
AvrII	CCTAGG	1 cut(s)	674
BaeGI	GKGCMC	1 cut(s)	430
BalI	TGGCCA	1 cut(s)	92
BbsI	GAAGAC	1 cut(s)	1059
Bbv12I	GWGCWC	1 cut(s)	430
BbvI	GCAGC	2 cut(s)	95, 637
BccI	CCATC	6 cut(s)	37, 101, 119, 384, 443, 510
BceAI	ACGGC	1 cut(s)	891
BcoDI	GTCTC	4 cut(s)	29, 47, 841, 1207
BfaI	CTAG	3 cut(s)	431, 560, 675
BfoI	RGCGCY	1 cut(s)	409
BfuAI	ACCTGC	1 cut(s)	157
BglI	GCCNNNNNGGC	1 cut(s)	1035
BisI	GCNGC	2 cut(s)	84, 651
BlnI	CCTAGG	1 cut(s)	674
BlpI	GCTNAGC	1 cut(s)	402
BlsI	GCNGC	2 cut(s)	85, 652
BmcAI	AGTACT	1 cut(s)	941
Bme18I	GGWCC	2 cut(s)	1023, 1117
BmgT120I	GGNCC	2 cut(s)	1023, 1117
BmrI	ACTGGG	1 cut(s)	458
BmsI	GCATC	3 cut(s)	294, 717, 913
BmuI	ACTGGG	1 cut(s)	458
BpiI	GAAGAC	1 cut(s)	1059
BpmI	CTGGAG	1 cut(s)	953
Bpu10I	CCTNAGC	1 cut(s)	409
Bpu1102I	GCTNAGC	1 cut(s)	402
BpuEI	CTTGAG	1 cut(s)	624
BsaAI	YACGTR	1 cut(s)	695
BsaJI	CCNNGG	6 cut(s)	87, 418, 674, 918, 1061, 1206
Bsc4I	CCNNNNNNNGG	2 cut(s)	470, 1207
Bse1I	ACTGG	2 cut(s)	464, 936
Bse3DI	GCAATG	1 cut(s)	1092
BseDI	CCNNGG	6 cut(s)	87, 418, 674, 918, 1061, 1206
BseGI	GGATG	5 cut(s)	93, 180, 395, 928, 1146
BseLI	CCNNNNNNNGG	2 cut(s)	470, 1207
BseMI	GCAATG	1 cut(s)	1092
BseMII	CTCAG	4 cut(s)	156, 416, 423, 632
BseNI	ACTGG	2 cut(s)	464, 936
BseRI	GAGGAG	1 cut(s)	35
BseSI	GKGCMC	1 cut(s)	430
BseXI	GCAGC	2 cut(s)	95, 637
Bsh1236I	CGCG	1 cut(s)	610
BshFI	GGCC	2 cut(s)	92, 147
BsiHKAI	GWGCWC	1 cut(s)	430
BslI	CCNNNNNNNGG	2 cut(s)	470, 1207
BsmAI	GTCTC	4 cut(s)	29, 47, 841, 1207
BsnI	GGCC	2 cut(s)	92, 147
Bsp1286I	GDGCHC	1 cut(s)	430
Bsp1407I	TGTACA	1 cut(s)	758
Bsp143I	GATC	2 cut(s)	3, 219
Bsp1720I	GCTNAGC	1 cut(s)	402
Bsp19I	CCATGG	2 cut(s)	87, 1061
BspACI	CCGC	2 cut(s)	788, 1178
BspANI	GGCC	2 cut(s)	92, 147
BspCNI	CTCAG	4 cut(s)	155, 415, 422, 631
BspFNI	CGCG	1 cut(s)	610
BspHI	TCATGA	1 cut(s)	438
BspMI	ACCTGC	1 cut(s)	157
BsrBI	CCGCTC	1 cut(s)	1180
BsrDI	GCAATG	1 cut(s)	1092
BsrGI	TGTACA	1 cut(s)	758
BsrI	ACTGG	2 cut(s)	464, 936
BssECI	CCNNGG	6 cut(s)	87, 418, 674, 918, 1061, 1206
BssMI	GATC	2 cut(s)	3, 219
BssT1I	CCWWGG	6 cut(s)	87, 418, 674, 918, 1061, 1206
Bst4CI	ACNGT	2 cut(s)	763, 894
Bst6I	CTCTTC	1 cut(s)	53
BstAPI	GCANNNNNTGC	1 cut(s)	865
BstAUI	TGTACA	1 cut(s)	758
BstBAI	YACGTR	1 cut(s)	695
BstC8I	GCNNGC	1 cut(s)	283
BstDEI	CTNAG	4 cut(s)	142, 402, 409, 618
BstDSI	CCRYGG	2 cut(s)	87, 1061
BstF5I	GGATG	5 cut(s)	93, 180, 395, 928, 1146
BstFNI	CGCG	1 cut(s)	610
BstH2I	RGCGCY	1 cut(s)	409
BstHHI	GCGC	2 cut(s)	408, 732
BstKTI	GATC	2 cut(s)	6, 222
BstMAI	GTCTC	4 cut(s)	29, 47, 841, 1207
BstMBI	GATC	2 cut(s)	3, 219
BstNSI	RCATGY	1 cut(s)	344
BstSLI	GKGCMC	1 cut(s)	430
BstUI	CGCG	1 cut(s)	610
BstV1I	GCAGC	2 cut(s)	95, 637
BstV2I	GAAGAC	1 cut(s)	1059
BsuRI	GGCC	2 cut(s)	92, 147
BtgI	CCRYGG	2 cut(s)	87, 1061
BtsCI	GGATG	5 cut(s)	93, 180, 395, 928, 1146
BtsIMutI	CAGTG	2 cut(s)	899, 967
BveI	ACCTGC	1 cut(s)	157
Cac8I	GCNNGC	1 cut(s)	283
CaiI	CAGNNNCTG	1 cut(s)	767
CciI	TCATGA	1 cut(s)	438
CfoI	GCGC	2 cut(s)	408, 732
Cfr13I	GGNCC	2 cut(s)	1023, 1117
Csp6I	GTAC	4 cut(s)	104, 696, 759, 940
CviAII	CATG	7 cut(s)	88, 163, 341, 439, 574, 1062, 1083
CviQI	GTAC	4 cut(s)	104, 696, 759, 940
DdeI	CTNAG	4 cut(s)	142, 402, 409, 618
DpnI	GATC	2 cut(s)	5, 221
DpnII	GATC	2 cut(s)	3, 219
EaeI	YGGCCR	1 cut(s)	90
Eam1104I	CTCTTC	1 cut(s)	53
EarI	CTCTTC	1 cut(s)	53
Eco130I	CCWWGG	6 cut(s)	87, 418, 674, 918, 1061, 1206
Eco147I	AGGCCT	1 cut(s)	147
Eco47I	GGWCC	2 cut(s)	1023, 1117
Eco47III	AGCGCT	1 cut(s)	407
EcoT14I	CCWWGG	6 cut(s)	87, 418, 674, 918, 1061, 1206
ErhI	CCWWGG	6 cut(s)	87, 418, 674, 918, 1061, 1206
FaeI	CATG	7 cut(s)	91, 166, 344, 442, 577, 1065, 1086
FatI	CATG	7 cut(s)	87, 162, 340, 438, 573, 1061, 1082
FauNDI	CATATG	1 cut(s)	260
Fnu4HI	GCNGC	2 cut(s)	84, 651
FokI	GGATG	5 cut(s)	80, 167, 402, 935, 1133
Fsp4HI	GCNGC	2 cut(s)	84, 651
FspBI	CTAG	3 cut(s)	431, 560, 675
GlaI	GCGC	2 cut(s)	407, 731
GluI	GCNGC	2 cut(s)	84, 651
GsuI	CTGGAG	1 cut(s)	953
HaeII	RGCGCY	1 cut(s)	409
HaeIII	GGCC	2 cut(s)	92, 147
HhaI	GCGC	2 cut(s)	408, 732
Hin1II	CATG	7 cut(s)	91, 166, 344, 442, 577, 1065, 1086
Hin6I	GCGC	2 cut(s)	406, 730
HinP1I	GCGC	2 cut(s)	406, 730
HinfI	GANTC	4 cut(s)	34, 308, 1160, 1215
Hpy166II	GTNNAC	1 cut(s)	428
Hpy188I	TCNGA	5 cut(s)	313, 493, 1159, 1165, 1224
Hpy188III	TCNNGA	4 cut(s)	439, 641, 657, 844
Hpy8I	GTNNAC	1 cut(s)	428
HpyAV	CCTTC	2 cut(s)	194, 596
HpyCH4III	ACNGT	2 cut(s)	763, 894
HpyCH4IV	ACGT	1 cut(s)	694
HpyCH4V	TGCA	8 cut(s)	166, 236, 344, 357, 428, 859, 1097, 1138
HpyF3I	CTNAG	4 cut(s)	142, 402, 409, 618
HpySE526I	ACGT	1 cut(s)	694
Hsp92II	CATG	7 cut(s)	91, 166, 344, 442, 577, 1065, 1086
HspAI	GCGC	2 cut(s)	406, 730
Kzo9I	GATC	2 cut(s)	3, 219
Lsp1109I	GCAGC	2 cut(s)	95, 637
LweI	GCATC	3 cut(s)	294, 717, 913
MaeI	CTAG	3 cut(s)	431, 560, 675
MaeII	ACGT	1 cut(s)	694
MaeIII	GTNAC	4 cut(s)	368, 913, 962, 1014
MalI	GATC	2 cut(s)	5, 221
MbiI	CCGCTC	1 cut(s)	1180
MboI	GATC	2 cut(s)	3, 219
MboII	GAAGA	7 cut(s)	40, 179, 454, 493, 525, 813, 1059
MhlI	GDGCHC	1 cut(s)	430
MlsI	TGGCCA	1 cut(s)	92
MluNI	TGGCCA	1 cut(s)	92
MlyI	GAGTC	1 cut(s)	1209
MmeI	TCCRAC	2 cut(s)	231, 367
Mox20I	TGGCCA	1 cut(s)	92
MscI	TGGCCA	1 cut(s)	92
MseI	TTAA	3 cut(s)	156, 326, 1004
MslI	CAYNNNNRTG	1 cut(s)	366
Msp20I	TGGCCA	1 cut(s)	92
MvnI	CGCG	1 cut(s)	610
NcoI	CCATGG	2 cut(s)	87, 1061
NdeI	CATATG	1 cut(s)	260
NdeII	GATC	2 cut(s)	3, 219
NlaIII	CATG	7 cut(s)	91, 166, 344, 442, 577, 1065, 1086
NmuCI	GTSAC	2 cut(s)	368, 962
NspI	RCATGY	1 cut(s)	344
OliI	CACNNNNGTG	1 cut(s)	366
PagI	TCATGA	1 cut(s)	438
PceI	AGGCCT	1 cut(s)	147
PfeI	GAWTC	3 cut(s)	34, 308, 1160
PkrI	GCNGC	2 cut(s)	85, 652
PleI	GAGTC	1 cut(s)	1209
PpsI	GAGTC	1 cut(s)	1209
Ppu21I	YACGTR	1 cut(s)	695
PspPI	GGNCC	2 cut(s)	1023, 1117
PsrI	GAACNNNNNNTAC	2 cut(s)	598, 630
PstNI	CAGNNNCTG	1 cut(s)	767
RsaI	GTAC	4 cut(s)	105, 697, 760, 941
RsaNI	GTAC	4 cut(s)	104, 696, 759, 940
RseI	CAYNNNNRTG	1 cut(s)	366
SaqAI	TTAA	3 cut(s)	156, 326, 1004
SatI	GCNGC	2 cut(s)	84, 651
Sau3AI	GATC	2 cut(s)	3, 219
Sau96I	GGNCC	2 cut(s)	1023, 1117
ScaI	AGTACT	1 cut(s)	941
SchI	GAGTC	1 cut(s)	1209
SduI	GDGCHC	1 cut(s)	430
SfaNI	GCATC	3 cut(s)	294, 717, 913
SinI	GGWCC	2 cut(s)	1023, 1117
SmiMI	CAYNNNNRTG	1 cut(s)	366
SmlI	CTYRAG	1 cut(s)	639
SmoI	CTYRAG	1 cut(s)	639
SseBI	AGGCCT	1 cut(s)	147
SsiI	CCGC	2 cut(s)	788, 1178
SspI	AATATT	2 cut(s)	497, 807
SspMI	CTAG	3 cut(s)	431, 560, 675
StuI	AGGCCT	1 cut(s)	147
StyI	CCWWGG	6 cut(s)	87, 418, 674, 918, 1061, 1206
TaaI	ACNGT	2 cut(s)	763, 894
TaiI	ACGT	1 cut(s)	697
TaqI	TCGA	3 cut(s)	32, 811, 1172
TatI	WGTACW	3 cut(s)	103, 758, 939
TfiI	GAWTC	3 cut(s)	34, 308, 1160
Tru1I	TTAA	3 cut(s)	156, 326, 1004
Tru9I	TTAA	3 cut(s)	156, 326, 1004
TscAI	CASTG	2 cut(s)	899, 967
TseFI	GTSAC	2 cut(s)	368, 962
TseI	GCWGC	2 cut(s)	83, 650
Tsp45I	GTSAC	2 cut(s)	368, 962
TspDTI	ATGAA	7 cut(s)	124, 169, 455, 543, 702, 1010, 1143
TspGWI	ACGGA	1 cut(s)	897
TspRI	CASTG	2 cut(s)	899, 967
VneI	GTGCAC	1 cut(s)	426
VpaK11BI	GGWCC	2 cut(s)	1023, 1117
XapI	RAATTY	2 cut(s)	1044, 1052
XceI	RCATGY	1 cut(s)	344
XcmI	CCANNNNNNNNNTGG	1 cut(s)	471
XmaJI	CCTAGG	1 cut(s)	674
XspI	CTAG	3 cut(s)	431, 560, 675
ZrmI	AGTACT	1 cut(s)	941

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.