Prupe.4G289100_v2.0.a1

Protein SUPPRESSOR OF GENE SILENCING

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
25445097 .. 25446850
1754 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G289100.1

Sequence Viewer

Length: 1404 bp
ATGAGTGTGAGAAGAAATGGAGGAAATCGCAAAGGAAAAGATGTCTTGGAAGTCAATAGCCCCAAGGTTGAGCAGTTAACTCATGGTGTAGCAGGCATTAGCCTGGACTCGGCCCAAGATGACGGAGAGTGGGAGGTAATTTCCAGGAAATCAAAGAACAGAGCTGAAAGCGGTACTGCAAAACAATGGGGTCCTCAGAATTCTAATTCTAAAGCTTGGGCACAGTTTGATGTTCAGAAGCCAAGTATGAGGAATAGTGGTGGACCAGGAAGGGCTCCTGGGAACTTCTGGCCATCACAAACTGCTGATTCTAAAAAACCAGCCGGAAGAGGAAATGTAAGGCAGCAGTCTTCTGCTAAGGTTTCCGAAAACAACCATGTGGCTCCGCAACAAGTAGTTCACCCTCCGCTGGACCACGGATGGAACTGGCAATCCAGAGCGGGTTTCCCTCAACCCAAGGGTTCAGATGATGGCCAGGGAAACTATGACAAGGACGGCGATGTGTCTGCTGCTACGGCTAATGGTGATGATGACAACTCTGATGCTGTGGGTGATAGTGATGATGAGCTATTTAGTGATGAGTTTGATTCGGATTCAAGTGAAAAGAGTCATGAAACTCGAAAGAGTAGCAGATGGTTCAAGAAATTCTTTGAGATTTTGGATAGTTTAACTGTTGATGAGATTAATGATCCTGCCAGGCAGTGGCACTGTCCTGCATGCCAAGGTGGTCCTGGTGCCATTGACTGGTACCGAGGCCTGCAACCCCTAATGACACATGCCAAAACAAAAGGATCAAAGAGGGTGATGCTCCATAGAGAGCTTGCGGAGCTTTTGGATGAGGAGTTGCAGAGGAAGGGAACTACAGTTATACCTGCCGGTGAAGCATTCGGTAAGTGGAAAGGTTTAAAAGATGAGGAAAAGGATCATGAAATTGTGTGGCCTCCAATGGTTGTCATCATGAACACTAGACTTGAGCAGGATGAGAATGAAAAGTGGATTGGTATGGGAAATCAGGAGCTTCTTGACTACTTCAGCTCTTATGCGGCTGTGAGGGCTCGGCACTCATATGGTCCACGGGGACACCGTGGGATTAGTATTTTGATCTTTGAAGCGTCTGCGAGGGGTTATTTAGAGGCTGAGCGTCTGCACAAGCATTTTACAGAGCAAGGAACAGACAGAGATGCTTGGGATCATCGTCGTGTCTTATTTCATTCAGGTGGGAAGCGACAGCTTTATGGGTACATGGCGGTGAAAGAAGACTTGGACATATTTAACCAGCATTCCCAAGGTAAATCGAAGCTGAAATTTGAGATGAGATCCTACCAGGAGATGCTTTATTGTAATCTGTATTTCTTGTCACTACAAGAAAAAAGTCCTTTCACAGCGCTCATTGGGCGTTGTTGA

Protein Analysis

468

Amino Acids

52.58

Weight (kDa)

6.37

Isoelectric Point (pI)

41.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 880
Acc65I GGTACC 1 cut(s) 747
AccB1I GGYRCC 2 cut(s) 734, 747
AccB7I CCANNNNNTGG 2 cut(s) 702, 744
AccBSI CCGCTC 1 cut(s) 440
AciI CCGC 7 cut(s) 171, 386, 407, 440, 824, 1043, 1247
AclWI GGATC 5 cut(s) 683, 799, 930, 1197, 1311
AcoI YGGCCR 2 cut(s) 290, 472
AcsI RAATTY 3 cut(s) 199, 644, 1304
AcuI CTGAAG 1 cut(s) 1015
AfaI GTAC 3 cut(s) 175, 749, 1241
AfeI AGCGCT 1 cut(s) 1386
AfiI CCNNNNNNNGG 4 cut(s) 109, 409, 702, 744
AgsI TTSAA 3 cut(s) 597, 640, 1109
AjnI CCWGG 8 cut(s) 102, 143, 265, 277, 474, 695, 730, 1323
AjuI GAANNNNNNNTTGG 4 cut(s) 981, 1013, 1244, 1276
AloI GAACNNNNNNTCC 2 cut(s) 416, 448
AluBI AGCT 9 cut(s) 164, 215, 568, 820, 829, 1018, 1035, 1231, 1300
AluI AGCT 9 cut(s) 164, 215, 568, 820, 829, 1018, 1035, 1231, 1300
AlwI GGATC 5 cut(s) 683, 799, 930, 1197, 1311
Aor51HI AGCGCT 1 cut(s) 1386
AoxI GGCC 5 cut(s) 111, 290, 472, 754, 938
ApeKI GCWGC 2 cut(s) 343, 509
ApoI RAATTY 3 cut(s) 199, 644, 1304
AseI ATTAAT 1 cut(s) 684
Asp718I GGTACC 1 cut(s) 747
AspLEI GCGC 1 cut(s) 1387
AspS9I GGNCC 6 cut(s) 112, 191, 263, 412, 728, 1070
AsuHPI GGTGA 6 cut(s) 392, 536, 563, 814, 890, 1261
AvaII GGWCC 5 cut(s) 191, 263, 412, 728, 1070
BaeGI GKGCMC 1 cut(s) 223
BalI TGGCCA 2 cut(s) 292, 474
BanI GGYRCC 2 cut(s) 734, 747
BanII GRGCYC 2 cut(s) 277, 1057
BbsI GAAGAC 2 cut(s) 342, 1263
BbvI GCAGC 2 cut(s) 355, 496
BccI CCATC 4 cut(s) 301, 414, 464, 627
BceAI ACGGC 2 cut(s) 511, 531
BcgI CGANNNNNNTGC 2 cut(s) 488, 522
BciT130I CCWGG 8 cut(s) 104, 145, 267, 279, 476, 697, 732, 1325
BfaI CTAG 1 cut(s) 966
BfmI CTRYAG 1 cut(s) 861
BfoI RGCGCY 1 cut(s) 1388
BfuAI ACCTGC 1 cut(s) 880
BisI GCNGC 3 cut(s) 344, 510, 1044
BlpI GCTNAGC 1 cut(s) 1137
BlsI GCNGC 3 cut(s) 345, 511, 1045
Bme1390I CCNGG 8 cut(s) 104, 145, 267, 279, 476, 697, 732, 1325
Bme18I GGWCC 5 cut(s) 191, 263, 412, 728, 1070
BmgT120I GGNCC 6 cut(s) 112, 191, 263, 412, 728, 1070
BmiI GGNNCC 5 cut(s) 192, 276, 384, 736, 749
BmrFI CCNGG 8 cut(s) 104, 145, 267, 279, 476, 697, 732, 1325
BmsI GCATC 4 cut(s) 532, 795, 1171, 1320
BpiI GAAGAC 2 cut(s) 342, 1263
Bpu10I CCTNAGC 1 cut(s) 357
Bpu1102I GCTNAGC 1 cut(s) 1137
BpuEI CTTGAG 1 cut(s) 992
Bsc4I CCNNNNNNNGG 4 cut(s) 109, 409, 702, 744
Bse118I RCCGGY 1 cut(s) 875
Bse1I ACTGG 2 cut(s) 431, 749
BseBI CCWGG 8 cut(s) 104, 145, 267, 279, 476, 697, 732, 1325
BseGI GGATG 3 cut(s) 425, 841, 985
BseLI CCNNNNNNNGG 4 cut(s) 109, 409, 702, 744
BseMII CTCAG 2 cut(s) 209, 1128
BseNI ACTGG 2 cut(s) 431, 749
BseRI GAGGAG 1 cut(s) 854
BseSI GKGCMC 1 cut(s) 223
BseXI GCAGC 2 cut(s) 355, 496
BsgI GTGCAG 1 cut(s) 1130
BshFI GGCC 5 cut(s) 113, 292, 474, 756, 940
BshNI GGYRCC 2 cut(s) 734, 747
BsiSI CCGG 2 cut(s) 324, 876
BslFI GGGAC 1 cut(s) 1092
BslI CCNNNNNNNGG 4 cut(s) 109, 409, 702, 744
BsmFI GGGAC 1 cut(s) 1092
BsmI GAATGC 2 cut(s) 884, 1279
BsnI GGCC 5 cut(s) 113, 292, 474, 756, 940
Bsp1286I GDGCHC 3 cut(s) 223, 277, 1057
Bsp143I GATC 6 cut(s) 688, 791, 922, 1101, 1189, 1316
Bsp1720I GCTNAGC 1 cut(s) 1137
BspACI CCGC 7 cut(s) 171, 386, 407, 440, 824, 1043, 1247
BspANI GGCC 5 cut(s) 113, 292, 474, 756, 940
BspCNI CTCAG 2 cut(s) 208, 1129
BspHI TCATGA 3 cut(s) 610, 925, 957
BspLI GGNNCC 5 cut(s) 192, 276, 384, 736, 749
BspMI ACCTGC 1 cut(s) 880
BspPI GGATC 5 cut(s) 683, 799, 930, 1197, 1311
BspT107I GGYRCC 2 cut(s) 734, 747
BsrBI CCGCTC 1 cut(s) 440
BsrFI RCCGGY 1 cut(s) 875
BsrI ACTGG 2 cut(s) 431, 749
BssAI RCCGGY 1 cut(s) 875
BssMI GATC 6 cut(s) 688, 791, 922, 1101, 1189, 1316
BssT1I CCWWGG 4 cut(s) 63, 456, 721, 1285
Bst2UI CCWGG 8 cut(s) 104, 145, 267, 279, 476, 697, 732, 1325
Bst4CI ACNGT 5 cut(s) 225, 673, 710, 865, 1085
Bst6I CTCTTC 1 cut(s) 322
BstC8I GCNNGC 4 cut(s) 94, 718, 758, 822
BstDEI CTNAG 3 cut(s) 195, 357, 1137
BstDSI CCRYGG 3 cut(s) 415, 1073, 1084
BstF5I GGATG 3 cut(s) 425, 841, 985
BstH2I RGCGCY 1 cut(s) 1388
BstHHI GCGC 1 cut(s) 1387
BstKTI GATC 6 cut(s) 691, 794, 925, 1104, 1192, 1319
BstMBI GATC 6 cut(s) 688, 791, 922, 1101, 1189, 1316
BstMWI GCNNNNNNNGC 5 cut(s) 515, 826, 881, 1052, 1393
BstNI CCWGG 8 cut(s) 104, 145, 267, 279, 476, 697, 732, 1325
BstNSI RCATGY 2 cut(s) 720, 779
BstSCI CCNGG 8 cut(s) 102, 143, 265, 277, 474, 695, 730, 1323
BstSFI CTRYAG 1 cut(s) 861
BstSLI GKGCMC 1 cut(s) 223
BstV1I GCAGC 2 cut(s) 355, 496
BstV2I GAAGAC 2 cut(s) 342, 1263
BstX2I RGATCY 1 cut(s) 1316
BstYI RGATCY 1 cut(s) 1316
BsuRI GGCC 5 cut(s) 113, 292, 474, 756, 940
BtgI CCRYGG 3 cut(s) 415, 1073, 1084
BtgZI GCGATG 1 cut(s) 513
BtsCI GGATG 3 cut(s) 425, 841, 985
BtsI GCAGTG 1 cut(s) 707
BtsIMutI CAGTG 2 cut(s) 706, 707
BveI ACCTGC 1 cut(s) 880
Cac8I GCNNGC 4 cut(s) 94, 718, 758, 822
CciI TCATGA 3 cut(s) 610, 925, 957
CfoI GCGC 1 cut(s) 1387
Cfr10I RCCGGY 1 cut(s) 875
Cfr13I GGNCC 6 cut(s) 112, 191, 263, 412, 728, 1070
CseI GACGC 2 cut(s) 1101, 1130
Csp6I GTAC 3 cut(s) 174, 748, 1240
CviAII CATG 8 cut(s) 83, 377, 611, 717, 776, 926, 958, 1243
CviQI GTAC 3 cut(s) 174, 748, 1240
DdeI CTNAG 3 cut(s) 195, 357, 1137
DpnI GATC 6 cut(s) 690, 793, 924, 1103, 1191, 1318
DpnII GATC 6 cut(s) 688, 791, 922, 1101, 1189, 1316
DraI TTTAAA 1 cut(s) 906
EaeI YGGCCR 2 cut(s) 290, 472
Eam1104I CTCTTC 1 cut(s) 322
EarI CTCTTC 1 cut(s) 322
Eco130I CCWWGG 4 cut(s) 63, 456, 721, 1285
Eco147I AGGCCT 1 cut(s) 756
Eco24I GRGCYC 2 cut(s) 277, 1057
Eco47I GGWCC 5 cut(s) 191, 263, 412, 728, 1070
Eco47III AGCGCT 1 cut(s) 1386
Eco57I CTGAAG 1 cut(s) 1015
EcoO109I RGGNCCY 1 cut(s) 191
EcoRI GAATTC 1 cut(s) 199
EcoRII CCWGG 8 cut(s) 102, 143, 265, 277, 474, 695, 730, 1323
EcoT14I CCWWGG 4 cut(s) 63, 456, 721, 1285
EcoT38I GRGCYC 2 cut(s) 277, 1057
ErhI CCWWGG 4 cut(s) 63, 456, 721, 1285
FaeI CATG 8 cut(s) 86, 380, 614, 720, 779, 929, 961, 1246
FalI AAGNNNNNCTT 2 cut(s) 632, 664
FaqI GGGAC 1 cut(s) 1092
FatI CATG 8 cut(s) 82, 376, 610, 716, 775, 925, 957, 1242
FauI CCCGC 1 cut(s) 433
FauNDI CATATG 1 cut(s) 1066
Fnu4HI GCNGC 3 cut(s) 344, 510, 1044
FokI GGATG 3 cut(s) 432, 848, 992
FriOI GRGCYC 2 cut(s) 277, 1057
Fsp4HI GCNGC 3 cut(s) 344, 510, 1044
FspBI CTAG 1 cut(s) 966
GlaI GCGC 1 cut(s) 1386
GluI GCNGC 3 cut(s) 344, 510, 1044
HaeII RGCGCY 1 cut(s) 1388
HaeIII GGCC 5 cut(s) 113, 292, 474, 756, 940
HapII CCGG 2 cut(s) 324, 876
HgaI GACGC 2 cut(s) 1101, 1130
HhaI GCGC 1 cut(s) 1387
Hin1II CATG 8 cut(s) 86, 380, 614, 720, 779, 929, 961, 1246
Hin6I GCGC 1 cut(s) 1385
HinP1I GCGC 1 cut(s) 1385
HincII GTYRAC 1 cut(s) 78
HindII GTYRAC 1 cut(s) 78
HindIII AAGCTT 1 cut(s) 213
HinfI GANTC 5 cut(s) 107, 308, 587, 593, 607
HpaI GTTAAC 1 cut(s) 78
HpaII CCGG 2 cut(s) 324, 876
HphI GGTGA 6 cut(s) 392, 536, 563, 814, 890, 1261
Hpy166II GTNNAC 4 cut(s) 78, 263, 400, 1073
Hpy188I TCNGA 6 cut(s) 198, 237, 367, 466, 541, 592
Hpy188III TCNNGA 7 cut(s) 435, 611, 640, 926, 958, 1013, 1022
Hpy8I GTNNAC 4 cut(s) 78, 263, 400, 1073
Hpy99I CGWCG 1 cut(s) 1200
HpyAV CCTTC 2 cut(s) 264, 847
HpyCH4III ACNGT 5 cut(s) 225, 673, 710, 865, 1085
HpyCH4V TGCA 5 cut(s) 179, 716, 760, 847, 1147
HpyF10VI GCNNNNNNNGC 5 cut(s) 515, 826, 881, 1052, 1393
HpyF3I CTNAG 3 cut(s) 195, 357, 1137
Hsp92II CATG 8 cut(s) 86, 380, 614, 720, 779, 929, 961, 1246
HspAI GCGC 1 cut(s) 1385
KpnI GGTACC 1 cut(s) 751
KspAI GTTAAC 1 cut(s) 78
Kzo9I GATC 6 cut(s) 688, 791, 922, 1101, 1189, 1316
LmnI GCTCC 5 cut(s) 280, 388, 813, 826, 1015
Lsp1109I GCAGC 2 cut(s) 355, 496
LweI GCATC 4 cut(s) 532, 795, 1171, 1320
MaeI CTAG 1 cut(s) 966
MaeIII GTNAC 1 cut(s) 1356
MalI GATC 6 cut(s) 690, 793, 924, 1103, 1191, 1318
MbiI CCGCTC 1 cut(s) 440
MboI GATC 6 cut(s) 688, 791, 922, 1101, 1189, 1316
MboII GAAGA 4 cut(s) 24, 339, 342, 1268
MflI RGATCY 1 cut(s) 1316
MhlI GDGCHC 3 cut(s) 223, 277, 1057
MlsI TGGCCA 2 cut(s) 292, 474
MluCI AATT 6 cut(s) 138, 199, 205, 644, 930, 1304
MluNI TGGCCA 2 cut(s) 292, 474
MlyI GAGTC 2 cut(s) 101, 616
Mox20I TGGCCA 2 cut(s) 292, 474
MscI TGGCCA 2 cut(s) 292, 474
MseI TTAA 5 cut(s) 77, 668, 684, 905, 1272
MslI CAYNNNNRTG 4 cut(s) 1065, 1197, 1215, 1247
Msp20I TGGCCA 2 cut(s) 292, 474
MspA1I CMGCKG 1 cut(s) 409
MspI CCGG 2 cut(s) 324, 876
MspR9I CCNGG 8 cut(s) 104, 145, 267, 279, 476, 697, 732, 1325
Mva1269I GAATGC 2 cut(s) 884, 1279
MvaI CCWGG 8 cut(s) 104, 145, 267, 279, 476, 697, 732, 1325
MwoI GCNNNNNNNGC 5 cut(s) 515, 826, 881, 1052, 1393
NdeI CATATG 1 cut(s) 1066
NdeII GATC 6 cut(s) 688, 791, 922, 1101, 1189, 1316
NlaIII CATG 8 cut(s) 86, 380, 614, 720, 779, 929, 961, 1246
NlaIV GGNNCC 5 cut(s) 192, 276, 384, 736, 749
NmeAIII GCCGAG 2 cut(s) 89, 1036
NmuCI GTSAC 1 cut(s) 1356
NspI RCATGY 2 cut(s) 720, 779
PaeI GCATGC 1 cut(s) 720
PagI TCATGA 3 cut(s) 610, 925, 957
PceI AGGCCT 1 cut(s) 756
PcsI WCGNNNNNNNCGW 1 cut(s) 1081
PctI GAATGC 2 cut(s) 884, 1279
PfeI GAWTC 3 cut(s) 308, 587, 593
PflMI CCANNNNNTGG 2 cut(s) 702, 744
PfoI TCCNGGA 1 cut(s) 143
PkrI GCNGC 3 cut(s) 345, 511, 1045
PleI GAGTC 2 cut(s) 101, 615
PpsI GAGTC 2 cut(s) 101, 615
PpuMI RGGWCCY 1 cut(s) 191
PshBI ATTAAT 1 cut(s) 684
Psp5II RGGWCCY 1 cut(s) 191
Psp6I CCWGG 8 cut(s) 102, 143, 265, 277, 474, 695, 730, 1323
PspGI CCWGG 8 cut(s) 102, 143, 265, 277, 474, 695, 730, 1323
PspN4I GGNNCC 5 cut(s) 192, 276, 384, 736, 749
PspPI GGNCC 6 cut(s) 112, 191, 263, 412, 728, 1070
PspPPI RGGWCCY 1 cut(s) 191
PsuI RGATCY 1 cut(s) 1316
RsaI GTAC 3 cut(s) 175, 749, 1241
RsaNI GTAC 3 cut(s) 174, 748, 1240
RseI CAYNNNNRTG 4 cut(s) 1065, 1197, 1215, 1247
SaqAI TTAA 5 cut(s) 77, 668, 684, 905, 1272
SatI GCNGC 3 cut(s) 344, 510, 1044
Sau3AI GATC 6 cut(s) 688, 791, 922, 1101, 1189, 1316
Sau96I GGNCC 6 cut(s) 112, 191, 263, 412, 728, 1070
SchI GAGTC 2 cut(s) 101, 616
ScrFI CCNGG 8 cut(s) 104, 145, 267, 279, 476, 697, 732, 1325
SduI GDGCHC 3 cut(s) 223, 277, 1057
SfaNI GCATC 4 cut(s) 532, 795, 1171, 1320
SfcI CTRYAG 1 cut(s) 861
SinI GGWCC 5 cut(s) 191, 263, 412, 728, 1070
SmiMI CAYNNNNRTG 4 cut(s) 1065, 1197, 1215, 1247
SmlI CTYRAG 1 cut(s) 971
SmoI CTYRAG 1 cut(s) 971
SphI GCATGC 1 cut(s) 720
Sse9I AATT 6 cut(s) 138, 199, 205, 644, 930, 1304
SseBI AGGCCT 1 cut(s) 756
SsiI CCGC 7 cut(s) 171, 386, 407, 440, 824, 1043, 1247
SspMI CTAG 1 cut(s) 966
StuI AGGCCT 1 cut(s) 756
StyD4I CCNGG 8 cut(s) 102, 143, 265, 277, 474, 695, 730, 1323
StyI CCWWGG 4 cut(s) 63, 456, 721, 1285
TaaI ACNGT 5 cut(s) 225, 673, 710, 865, 1085
TaqI TCGA 2 cut(s) 619, 1295
TasI AATT 6 cut(s) 138, 199, 205, 644, 930, 1304
TauI GCSGC 1 cut(s) 1046
TfiI GAWTC 3 cut(s) 308, 587, 593
Tru1I TTAA 5 cut(s) 77, 668, 684, 905, 1272
Tru9I TTAA 5 cut(s) 77, 668, 684, 905, 1272
TscAI CASTG 2 cut(s) 707, 713
TseFI GTSAC 1 cut(s) 1356
TseI GCWGC 2 cut(s) 343, 509
Tsp45I GTSAC 1 cut(s) 1356
TspDTI ATGAA 5 cut(s) 627, 942, 974, 1002, 1199
TspGWI ACGGA 2 cut(s) 138, 432
TspRI CASTG 2 cut(s) 707, 713
Van91I CCANNNNNTGG 2 cut(s) 702, 744
VpaK11BI GGWCC 5 cut(s) 191, 263, 412, 728, 1070
VspI ATTAAT 1 cut(s) 684
XapI RAATTY 3 cut(s) 199, 644, 1304
XceI RCATGY 2 cut(s) 720, 779
XcmI CCANNNNNNNNNTGG 1 cut(s) 728
XspI CTAG 1 cut(s) 966
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.