Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0002538

Physical Location & Seq

Genomic Coordinates Forward (+)

19620471 .. 19622691

Gene Structure 2221 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0215900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1299 bp

ATGAGGGTGGAAGCAAAACTATATGGGACAACCATTCCCATTGAGTCCCCTCCGGCAGGTCACCTTACCAAGGACCTTGGTTCTGGACAAGGTAGTTGCTCCAACTTGAAGGAGAAGACCACAAAGCAAAAGGCTGAGGAGGTTGCTAACCCTGCAAAGAAGCGCTTAGAGTTAGTTGATGACATAGATGAGAAAATAGAAGAACAAAATGGCAGGGGGTTGCTGGTGGAAGTAGAAGCTGGTATAGAAGTAGCAACTACTTTAGAAGTGGCAGCTGCTATAGAGCATGTTCATGCCGCTCCTATAGAGGTTCGTGCTGCTCCTATTAAGTCGGTTGAAGTTACACAGGAGGAACTGAGGCCGTCAGAGTGCAAATTGGCTTTAGGATCAGCAGACAATATTGTTGCCATTGCAAGCGTTGTTGAAGTCCAAGATGATAAGTGCGCCAATCAGACAGTTCATGGTCATCCTTTGGGAGAAGGGAATGTGCGAGTGTCGATCATTCGTCCACTTGTTCCTGAAGCTAAGCTTCCATTCCCAGTCAATGATGAGATAGTGTCTGTCAAAGATGCTGTTGGGACTTATATCGCTTGGCCGAGGGACCTCATACTTCAATCCCCTCCCCAAACTAACAAGAAACAACCAAATAAGGCCGCATGTAAGGGCTCGAAGAAAAGGAAAAGGCAAACAGCTGGTGATGAAGAGGAGTATATTGACTTGAAGAAGCTGCCAAAAGATTACCCTTCACCTTTGAAGTGCTTGTGGTTGTGGGGGAGAGACGCACTAGCCGATGGGAAGACAATCTCTTTCATGCTAACAGATAAAGTATTTGGGATCAATAGGAAGCAATATCTGTATAAGGGAGACATTCATGCATTGTGTACCATGAGTGAACTATCAGGCGGCGTCATCTGCATGTATATGTGTAAGCATTGGATGTTAACTGTTGTCAACCCGGAGGAAGAAATTATCTACTTCATGGATCCACTAAGGCGTCGACTAGTTGGCGGAGAATGGCAGATCATTGTGGAGAATGGGATCAAAATTTACAATGCTCAGAGGAATCGATCTGGCCGGAAATCAATAACGTGGCACAATATGGGGGGTATTCCGGTGCAACAAGGTGACAAGGATTGTGGGATATTCATCATGCGGTACATGAAGGAAATAGTTCAGGATAAGAATCTAGAATTTGCTTCAAAGTGGCAGCGACGATCAGATCTGGTATACACCCAGAAGGATCTTGATGATGTCAGGTCAGAGTGGGCTAGGTTCGTCATGAAGTATCATGCAACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005655 GO:0005730 GO:0005737 GO:0005783 GO:0005829 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009605 GO:0009607 GO:0009615 GO:0009616 GO:0009791 GO:0009892 GO:0009987 GO:0010025 GO:0010033 GO:0010050 GO:0010166 GO:0010267 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0012505 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019222 GO:0030422 GO:0030677 GO:0030681 GO:0031047 GO:0031050 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0035194 GO:0035821 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043331 GO:0044003 GO:0044237 GO:0044238 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044452 GO:0044464 GO:0045087 GO:0046483 GO:0048519 GO:0048856 GO:0050789 GO:0050896 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052018 GO:0052249 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0098542 GO:0098586 GO:1901360 GO:1901568 GO:1901570 GO:1901576 GO:1901698 GO:1901699 GO:1902494 GO:1902555 GO:1905348 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

XS zf-XS

Protein Analysis

432

Amino Acids

48.52

Weight (kDa)

7.55

Isoelectric Point (pI)

54.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF8039	PF26133	120 - 204	5.9e-11	Domain of unknown function (DUF8039)
Peptidase_C48	PF02902	308 - 423	1.4e-08	Ulp1 protease family, C-terminal catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002538)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23570 AT5G23570 AT5G23570 AT5G23570
fragaria_vesca	FvH4_1g25920 FvH4_5g23140 FvH4_5g23140
malus_domestica	MD03G1212700.v1.1 MD03G1233800.v1.1 MD06G1181900.v1.1 MD14G1187800.v1.1
prunus_persica	Prupe.4G288400_v2.0.a1 Prupe.4G288400_v2.0.a1 Prupe.4G288400_v2.0.a1 Prupe.4G289100_v2.0.a1 Prupe.5G027600_v2.0.a1 Prupe.5G027600_v2.0.a1
pyrus_communis	pycom03g16150 pycom03g18030
rosa_chinensis	RchiOBHm_Chr3g0485061 RchiOBHm_Chr7g0212021
rosa_laevigata	RLG00000002944 RLG00000023171
rosa_multiflora	Rmu_sc0002283.1_g000007 Rmu_sc0006040.1_g000012 Rmu_sc0014812.1_g000006
rosa_roxburghii	Rroxscaffold_3G00247180 Rroxscaffold_6G00397210
rosa_rugosa	Rorug03G0215900 Rorug03G0216000 Rorug03G0216100 Rorug07G0130300
rosa_samantha	Rh3AG266000 Rh3BG301600 Rh3CG299900 Rh3DG295700 Rh7AG263100 Rh7BG257100 Rh7CG279700 Rh7DG269800
rosa_wichuraiana	Rw7G022450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	47
AccBSI	CCGCTC	1 cut(s)	299
AccI	GTMKAC	2 cut(s)	997, 1227
AciI	CCGC	5 cut(s)	297, 654, 903, 1008, 1153
AclWI	GGATC	6 cut(s)	394, 842, 977, 990, 1046, 1248
AcoI	YGGCCR	2 cut(s)	593, 1072
AcsI	RAATTY	2 cut(s)	1044, 1190
AcuI	CTGAAG	1 cut(s)	540
AcyI	GRCGYC	2 cut(s)	906, 994
AfaI	GTAC	2 cut(s)	883, 1157
AfeI	AGCGCT	1 cut(s)	164
AfiI	CCNNNNNNNGG	2 cut(s)	56, 70
AgsI	TTSAA	7 cut(s)	109, 338, 425, 614, 721, 754, 1200
AhlI	ACTAGT	1 cut(s)	1000
AluBI	AGCT	6 cut(s)	239, 275, 524, 529, 692, 727
AluI	AGCT	6 cut(s)	239, 275, 524, 529, 692, 727
Alw26I	GTCTC	2 cut(s)	771, 858
AlwI	GGATC	6 cut(s)	394, 842, 977, 990, 1046, 1248
Aor51HI	AGCGCT	1 cut(s)	164
AoxI	GGCC	4 cut(s)	359, 593, 651, 1072
ApeKI	GCWGC	5 cut(s)	272, 275, 317, 727, 1207
ApoI	RAATTY	2 cut(s)	1044, 1190
Asp700I	GAANNNNTTC	1 cut(s)	1170
AspLEI	GCGC	2 cut(s)	165, 446
AspS9I	GGNCC	2 cut(s)	73, 601
AsuC2I	CCSGG	1 cut(s)	956
AsuHPI	GGTGA	4 cut(s)	53, 707, 738, 1136
AvaII	GGWCC	2 cut(s)	73, 601
BamHI	GGATCC	1 cut(s)	982
BanII	GRGCYC	1 cut(s)	668
BbsI	GAAGAC	2 cut(s)	122, 803
BbvCI	CCTCAGC	1 cut(s)	135
BbvI	GCAGC	5 cut(s)	262, 284, 304, 714, 1219
BccI	CCATC	1 cut(s)	785
BceAI	ACGGC	1 cut(s)	346
BcnI	CCSGG	1 cut(s)	956
BcoDI	GTCTC	2 cut(s)	771, 858
BcuI	ACTAGT	1 cut(s)	1000
BfaI	CTAG	4 cut(s)	785, 1001, 1187, 1269
BfmI	CTRYAG	2 cut(s)	279, 303
BfoI	RGCGCY	1 cut(s)	166
BfuAI	ACCTGC	1 cut(s)	47
BglII	AGATCT	1 cut(s)	1219
BisI	GCNGC	8 cut(s)	273, 276, 297, 318, 654, 728, 904, 1208
BlpI	GCTNAGC	1 cut(s)	525
BlsI	GCNGC	8 cut(s)	274, 277, 298, 319, 655, 729, 905, 1209
Bme1390I	CCNGG	1 cut(s)	956
Bme18I	GGWCC	2 cut(s)	73, 601
BmgT120I	GGNCC	2 cut(s)	73, 601
BmiI	GGNNCC	2 cut(s)	602, 984
BmrFI	CCNGG	1 cut(s)	956
BmrI	ACTGGG	1 cut(s)	533
BmsI	GCATC	1 cut(s)	559
BmuI	ACTGGG	1 cut(s)	533
BpiI	GAAGAC	2 cut(s)	122, 803
Bpu10I	CCTNAGC	1 cut(s)	135
Bpu1102I	GCTNAGC	1 cut(s)	525
BpuMI	CCSGG	1 cut(s)	956
Bsa29I	ATCGAT	1 cut(s)	1066
BsaBI	GATNNNNATC	2 cut(s)	1145, 1182
BsaHI	GRCGYC	2 cut(s)	906, 994
BsaJI	CCNNGG	3 cut(s)	69, 76, 596
BsaWI	WCCGGW	1 cut(s)	1111
Bsc4I	CCNNNNNNNGG	2 cut(s)	56, 70
Bse1I	ACTGG	1 cut(s)	539
Bse3DI	GCAATG	1 cut(s)	408
Bse8I	GATNNNNATC	2 cut(s)	1145, 1182
BseCI	ATCGAT	1 cut(s)	1066
BseDI	CCNNGG	3 cut(s)	69, 76, 596
BseGI	GGATG	2 cut(s)	466, 942
BseJI	GATNNNNATC	2 cut(s)	1145, 1182
BseLI	CCNNNNNNNGG	2 cut(s)	56, 70
BseMI	GCAATG	1 cut(s)	408
BseMII	CTCAG	3 cut(s)	126, 347, 1070
BseNI	ACTGG	1 cut(s)	539
BseRI	GAGGAG	2 cut(s)	152, 719
BseXI	GCAGC	5 cut(s)	262, 284, 304, 714, 1219
BshFI	GGCC	4 cut(s)	361, 595, 653, 1074
BshVI	ATCGAT	1 cut(s)	1066
BsiSI	CCGG	4 cut(s)	53, 956, 1075, 1112
BslFI	GGGAC	4 cut(s)	31, 40, 592, 614
BslI	CCNNNNNNNGG	2 cut(s)	56, 70
BsmAI	GTCTC	2 cut(s)	771, 858
BsmBI	CGTCTC	1 cut(s)	771
BsmFI	GGGAC	4 cut(s)	31, 40, 592, 614
BsnI	GGCC	4 cut(s)	361, 595, 653, 1074
Bsp1286I	GDGCHC	1 cut(s)	668
Bsp1720I	GCTNAGC	1 cut(s)	525
BspACI	CCGC	5 cut(s)	297, 654, 903, 1008, 1153
BspANI	GGCC	4 cut(s)	361, 595, 653, 1074
BspCNI	CTCAG	3 cut(s)	127, 348, 1069
BspDI	ATCGAT	1 cut(s)	1066
BspHI	TCATGA	1 cut(s)	1278
BspLI	GGNNCC	2 cut(s)	602, 984
BspMI	ACCTGC	1 cut(s)	47
BspPI	GGATC	6 cut(s)	394, 842, 977, 990, 1046, 1248
BsrBI	CCGCTC	1 cut(s)	299
BsrDI	GCAATG	1 cut(s)	408
BsrI	ACTGG	1 cut(s)	539
BssECI	CCNNGG	3 cut(s)	69, 76, 596
BssNAI	GTATAC	1 cut(s)	1228
BssNI	GRCGYC	2 cut(s)	906, 994
BssT1I	CCWWGG	2 cut(s)	69, 76
Bst1107I	GTATAC	1 cut(s)	1228
Bst4CI	ACNGT	2 cut(s)	457, 946
Bst6I	CTCTTC	1 cut(s)	696
BstACI	GRCGYC	2 cut(s)	906, 994
BstC8I	GCNNGC	1 cut(s)	415
BstDEI	CTNAG	6 cut(s)	135, 166, 356, 525, 989, 1056
BstEII	GGTNACC	1 cut(s)	59
BstENI	CCTNNNNNAGG	2 cut(s)	54, 68
BstF5I	GGATG	2 cut(s)	466, 942
BstH2I	RGCGCY	1 cut(s)	166
BstHHI	GCGC	2 cut(s)	165, 446
BstMAI	GTCTC	2 cut(s)	771, 858
BstMWI	GCNNNNNNNGC	2 cut(s)	152, 912
BstNSI	RCATGY	3 cut(s)	290, 660, 919
BstPI	GGTNACC	1 cut(s)	59
BstSCI	CCNGG	1 cut(s)	954
BstSFI	CTRYAG	2 cut(s)	279, 303
BstV1I	GCAGC	5 cut(s)	262, 284, 304, 714, 1219
BstV2I	GAAGAC	2 cut(s)	122, 803
BstX2I	RGATCY	3 cut(s)	982, 1219, 1240
BstYI	RGATCY	3 cut(s)	982, 1219, 1240
BstZ17I	GTATAC	1 cut(s)	1228
Bsu15I	ATCGAT	1 cut(s)	1066
BsuRI	GGCC	4 cut(s)	361, 595, 653, 1074
BsuTUI	ATCGAT	1 cut(s)	1066
BtsCI	GGATG	2 cut(s)	466, 942
BveI	ACCTGC	1 cut(s)	47
Cac8I	GCNNGC	1 cut(s)	415
CciI	TCATGA	1 cut(s)	1278
CfoI	GCGC	2 cut(s)	165, 446
Cfr13I	GGNCC	2 cut(s)	73, 601
ClaI	ATCGAT	1 cut(s)	1066
CseI	GACGC	3 cut(s)	788, 895, 983
Csp6I	GTAC	2 cut(s)	882, 1156
CspCI	CAANNNNNGTGG	2 cut(s)	1117, 1152
CviQI	GTAC	2 cut(s)	882, 1156
DdeI	CTNAG	6 cut(s)	135, 166, 356, 525, 989, 1056
EaeI	YGGCCR	2 cut(s)	593, 1072
Eam1104I	CTCTTC	1 cut(s)	696
EarI	CTCTTC	1 cut(s)	696
EciI	GGCGGA	1 cut(s)	1023
Eco130I	CCWWGG	2 cut(s)	69, 76
Eco24I	GRGCYC	1 cut(s)	668
Eco47I	GGWCC	2 cut(s)	73, 601
Eco47III	AGCGCT	1 cut(s)	164
Eco57I	CTGAAG	1 cut(s)	540
Eco91I	GGTNACC	1 cut(s)	59
EcoNI	CCTNNNNNAGG	2 cut(s)	54, 68
EcoO109I	RGGNCCY	2 cut(s)	73, 601
EcoO65I	GGTNACC	1 cut(s)	59
EcoT14I	CCWWGG	2 cut(s)	69, 76
EcoT22I	ATGCAT	1 cut(s)	877
EcoT38I	GRGCYC	1 cut(s)	668
ErhI	CCWWGG	2 cut(s)	69, 76
Esp3I	CGTCTC	1 cut(s)	771
FalI	AAGNNNNNCTT	4 cut(s)	149, 181, 513, 545
FaqI	GGGAC	4 cut(s)	31, 40, 592, 614
FblI	GTMKAC	2 cut(s)	997, 1227
Fnu4HI	GCNGC	8 cut(s)	273, 276, 297, 318, 654, 728, 904, 1208
FokI	GGATG	2 cut(s)	453, 949
FriOI	GRGCYC	1 cut(s)	668
Fsp4HI	GCNGC	8 cut(s)	273, 276, 297, 318, 654, 728, 904, 1208
FspBI	CTAG	4 cut(s)	785, 1001, 1187, 1269
GlaI	GCGC	2 cut(s)	164, 445
GluI	GCNGC	8 cut(s)	273, 276, 297, 318, 654, 728, 904, 1208
HaeII	RGCGCY	1 cut(s)	166
HaeIII	GGCC	4 cut(s)	361, 595, 653, 1074
HapII	CCGG	4 cut(s)	53, 956, 1075, 1112
HgaI	GACGC	3 cut(s)	788, 895, 983
HhaI	GCGC	2 cut(s)	165, 446
Hin1I	GRCGYC	2 cut(s)	906, 994
Hin6I	GCGC	2 cut(s)	163, 444
HinP1I	GCGC	2 cut(s)	163, 444
HincII	GTYRAC	3 cut(s)	942, 952, 998
HindII	GTYRAC	3 cut(s)	942, 952, 998
HindIII	AAGCTT	1 cut(s)	527
HinfI	GANTC	3 cut(s)	44, 1063, 1183
HpaI	GTTAAC	1 cut(s)	942
HpaII	CCGG	4 cut(s)	53, 956, 1075, 1112
HphI	GGTGA	4 cut(s)	53, 707, 738, 1136
Hpy166II	GTNNAC	7 cut(s)	509, 882, 893, 942, 952, 998, 1228
Hpy188I	TCNGA	5 cut(s)	367, 453, 1059, 1219, 1261
Hpy188III	TCNNGA	6 cut(s)	84, 518, 1175, 1187, 1244, 1279
Hpy8I	GTNNAC	7 cut(s)	509, 882, 893, 942, 952, 998, 1228
Hpy99I	CGWCG	2 cut(s)	999, 1215
HpyAV	CCTTC	5 cut(s)	103, 473, 753, 1156, 1231
HpyCH4III	ACNGT	2 cut(s)	457, 946
HpyCH4IV	ACGT	1 cut(s)	1088
HpyCH4V	TGCA	7 cut(s)	155, 372, 413, 875, 915, 1117, 1292
HpyF10VI	GCNNNNNNNGC	2 cut(s)	152, 912
HpyF3I	CTNAG	6 cut(s)	135, 166, 356, 525, 989, 1056
HpySE526I	ACGT	1 cut(s)	1088
Hsp92I	GRCGYC	2 cut(s)	906, 994
HspAI	GCGC	2 cut(s)	163, 444
KspAI	GTTAAC	1 cut(s)	942
LmnI	GCTCC	3 cut(s)	104, 304, 325
Lsp1109I	GCAGC	5 cut(s)	262, 284, 304, 714, 1219
LweI	GCATC	1 cut(s)	559
MaeI	CTAG	4 cut(s)	785, 1001, 1187, 1269
MaeII	ACGT	1 cut(s)	1088
MaeIII	GTNAC	3 cut(s)	59, 340, 1124
MbiI	CCGCTC	1 cut(s)	299
MboII	GAAGA	7 cut(s)	127, 212, 682, 713, 733, 808, 974
MflI	RGATCY	3 cut(s)	982, 1219, 1240
MhlI	GDGCHC	1 cut(s)	668
MluCI	AATT	4 cut(s)	374, 966, 1044, 1190
MlyI	GAGTC	1 cut(s)	53
MmeI	TCCRAC	1 cut(s)	126
Mph1103I	ATGCAT	1 cut(s)	877
MroXI	GAANNNNTTC	1 cut(s)	1170
MseI	TTAA	2 cut(s)	327, 941
MslI	CAYNNNNRTG	3 cut(s)	291, 914, 920
MspA1I	CMGCKG	2 cut(s)	275, 692
MspI	CCGG	4 cut(s)	53, 956, 1075, 1112
MspR9I	CCNGG	1 cut(s)	956
MwoI	GCNNNNNNNGC	2 cut(s)	152, 912
NciI	CCSGG	1 cut(s)	956
NlaIV	GGNNCC	2 cut(s)	602, 984
NmeAIII	GCCGAG	1 cut(s)	621
NmuCI	GTSAC	2 cut(s)	59, 1124
NsiI	ATGCAT	1 cut(s)	877
NspI	RCATGY	3 cut(s)	290, 660, 919
PagI	TCATGA	1 cut(s)	1278
PcsI	WCGNNNNNNNCGW	1 cut(s)	786
PdmI	GAANNNNTTC	1 cut(s)	1170
PfeI	GAWTC	2 cut(s)	1063, 1183
PkrI	GCNGC	8 cut(s)	274, 277, 298, 319, 655, 729, 905, 1209
PleI	GAGTC	1 cut(s)	52
PpsI	GAGTC	1 cut(s)	52
PpuMI	RGGWCCY	2 cut(s)	73, 601
Psp5II	RGGWCCY	2 cut(s)	73, 601
PspEI	GGTNACC	1 cut(s)	59
PspN4I	GGNNCC	2 cut(s)	602, 984
PspPI	GGNCC	2 cut(s)	73, 601
PspPPI	RGGWCCY	2 cut(s)	73, 601
PsuI	RGATCY	3 cut(s)	982, 1219, 1240
PvuII	CAGCTG	2 cut(s)	275, 692
RsaI	GTAC	2 cut(s)	883, 1157
RsaNI	GTAC	2 cut(s)	882, 1156
RseI	CAYNNNNRTG	3 cut(s)	291, 914, 920
SalI	GTCGAC	1 cut(s)	996
SaqAI	TTAA	2 cut(s)	327, 941
SatI	GCNGC	8 cut(s)	273, 276, 297, 318, 654, 728, 904, 1208
Sau96I	GGNCC	2 cut(s)	73, 601
SchI	GAGTC	1 cut(s)	53
ScrFI	CCNGG	1 cut(s)	956
SduI	GDGCHC	1 cut(s)	668
SfaNI	GCATC	1 cut(s)	559
SfcI	CTRYAG	2 cut(s)	279, 303
SinI	GGWCC	2 cut(s)	73, 601
SmiMI	CAYNNNNRTG	3 cut(s)	291, 914, 920
SpeI	ACTAGT	1 cut(s)	1000
Sse9I	AATT	4 cut(s)	374, 966, 1044, 1190
SsiI	CCGC	5 cut(s)	297, 654, 903, 1008, 1153
SspI	AATATT	1 cut(s)	400
SspMI	CTAG	4 cut(s)	785, 1001, 1187, 1269
StyD4I	CCNGG	1 cut(s)	954
StyI	CCWWGG	2 cut(s)	69, 76
TaaI	ACNGT	2 cut(s)	457, 946
TaiI	ACGT	1 cut(s)	1091
TaqI	TCGA	4 cut(s)	497, 668, 997, 1066
TasI	AATT	4 cut(s)	374, 966, 1044, 1190
TauI	GCSGC	3 cut(s)	299, 656, 906
TfiI	GAWTC	2 cut(s)	1063, 1183
Tru1I	TTAA	2 cut(s)	327, 941
Tru9I	TTAA	2 cut(s)	327, 941
TseFI	GTSAC	2 cut(s)	59, 1124
TseI	GCWGC	5 cut(s)	272, 275, 317, 727, 1207
Tsp45I	GTSAC	2 cut(s)	59, 1124
TspDTI	ATGAA	9 cut(s)	281, 449, 714, 799, 860, 967, 1135, 1175, 1295
VpaK11BI	GGWCC	2 cut(s)	73, 601
XagI	CCTNNNNNAGG	2 cut(s)	54, 68
XapI	RAATTY	2 cut(s)	1044, 1190
XbaI	TCTAGA	1 cut(s)	1186
XceI	RCATGY	3 cut(s)	290, 660, 919
XmiI	GTMKAC	2 cut(s)	997, 1227
XmnI	GAANNNNTTC	1 cut(s)	1170
XspI	CTAG	4 cut(s)	785, 1001, 1187, 1269
Zsp2I	ATGCAT	1 cut(s)	877

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.