Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0002538

Physical Location & Seq

Genomic Coordinates Forward (+)

19446426 .. 19451972

Gene Structure 5547 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000023171

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2211 bp

ATGGGCACCACTAACTTGGAGCCCTTGACACCACAAAACGACTGCATAAAATTGAACAGATTCTCCTTAACCTTCACTGCCAAATGCTCAATTGATTTCTCGATGGTGATATCCATAGAGGGTAGTATGGCTAGGTCCTCGACACCAGACTCTGATCTCGGCAAAGAGGGGACCAGCACCAGTGGTGAGCTGGAGCTTGCCACAAGGCTCTGGTCGAGCCATGGTGACGGTGTTGCAAAAGAAGAAGGTGGAGTCAGGAGACTGGATGTAAATGCTAAGACGACGATCAGCTTCTCTCTCTCTCTTTCTCTCTCTCTCAGGATGAGTTCAAGTCGAGGTGGTGGCAATCCCAAAGGAAAGCATGTCTCTGAAGTCAATAGCCTTAAGGTTGAGCAGTTGAGTCAGGATATAGGAGAAATTGACCTGGGCTCAACGCAAGATGATGGAGACTGGGAGGAGGTAGTTGGCAGGAAATCGAAGAACAGGGCTGGAAGTACTACTGCAAAACCATGGGGTTCTCAAAGTTCTACTTCTAAATCTTGGGGACAGCAAGATGCTCAGAAGCCAAGTGTGCGGAGCATTGGTGGATCAGCACGGGCTGCTGGGAATGCTTGGGCATCACAAGCTGCTGATTCTAGAAAATCGGCTGGGAGAGGAAATGTCTGGCAGCAGTCTACTGCTAGGAGTTTTGATAATAGGTCTGTAGCCCCGCAGCATGTAATTCCTCCCCCACTGGACCATGGATGGAACTGGCAGTCTAGGGCTGGTTCCACTCAACCTAAGGGTCCCGAAGATGACAAGAACAACTATGTGGCTGCTGTGGATGATGATGGGGATGAATTATCTGATGCTGATGGTGATTCTGATGATGATCTATCTGATGAATTTGACTCGGATGCTAGTGTAAAGAGCCATGGAACTAGAAAGAAGAATCGGTTGCTCAAGAAATTTTTTGAGGTATTGGATGGCTTAACTATTGAGGAGATTAATGATCCTGTGAGGCAGTGGCACTGTCCTGCTTGCCAAAAGGGTCCTGGTGCCATTGACTGGTACCGAGGGCTCCAGCCCCTCATGACCCATGCCAAGACTAAAGGTTCAATAAGGGCAAGGCTCCACAGAGAGCTTGCTGAACTTTTGGATGAGGAGTTACGGAGGAGGGGAACTACAGTTGTACCTGCTGGTGAAGCATTTGGAAAATGGAAAGGTCTAACAGTTGAGGAAAAGGATCATGAAATTGTGTGGCCACCAATGGTTATTATTATGAATACCAGGCTTGAACAGGATGATAACGACAAGTGGATAGGCATGGGGAATCAAGAGCTGCTTGACTACTTCAGCTCGTATGCTGCTGTGAGGGCTAGACACTCTTATGGACCACAGGGGCACCGTGGCATGAGTCTCCTAATATTTGAGGCATCTGCAAGAGGTTATTTTGAGGCGGAGCGTCTGCACAGGCATTTTATAGAGCAAAGGACAGACAGGGATGCTTGGGATCGTAGTAGTCGTGTCTTATTTCATCCAGGAGGGCAGCGTCAACTGTATGGGTACATGGCAATGAAAGATGACTTGGATATATTTAACCAGCATTCCCAAGGTAAAGCCAAGCTGAAGTTTGAGATGAGGTCATATCAGGAGAAGGTTGTCAATGATCTTAGGCAAATGAGTGAGGACAATCAACAGCTTATCTGGTTGAAGAACAGGGTTGTTAAAGAACAAAGGCATGCAAAAGCTCTTGAAGAGTCTCTTGGTATTGTTAGTGAGAAGCTCCGCAAAACAACAGAGGAAAATCGTATTGTAAGACACAGGACCAAAACCCAACATGAAGAAACTAAGGAAGAGATGTATGAGCAAGAACAATTTTTCAAAGACCAAATCAAAATCATTCATGAATCAAGGGATGCTAAGGAAGAAGGTTTTGAGAGGCTGCAGCAGGAGCAGCGTGAGAAGGTGAAGCAGTCACATGGCCAGCCTTCACTTGACAGGTTGGTGGAAATTGCAAACTTCATCCAGTGCCAAGATAAGGAGATGGAGGATTTTGTGGCAGAGAGGGACATGCTGATAAAAGTTCATGGAGAAAACAAGGCTGCAATGAAGCGGAGGCACTGGGAGGAGGAGGTCGGTCTGGAGAAAGATTTCGATGCCAAATTAACCCAGCTCATGGATAAGTACTCCAAGGTTCAGCCTGAAGCAGCTGCCAACTCTGAGGGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005655 GO:0005730 GO:0005737 GO:0005783 GO:0005829 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009605 GO:0009607 GO:0009615 GO:0009616 GO:0009791 GO:0009892 GO:0009987 GO:0010025 GO:0010033 GO:0010050 GO:0010166 GO:0010267 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0012505 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019222 GO:0030422 GO:0030677 GO:0030681 GO:0031047 GO:0031050 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0035194 GO:0035821 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043331 GO:0044003 GO:0044237 GO:0044238 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044452 GO:0044464 GO:0045087 GO:0046483 GO:0048519 GO:0048856 GO:0050789 GO:0050896 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052018 GO:0052249 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0098542 GO:0098586 GO:1901360 GO:1901568 GO:1901570 GO:1901576 GO:1901698 GO:1901699 GO:1902494 GO:1902555 GO:1905348 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

XS zf-XS

Protein Analysis

737

Amino Acids

83.2

Weight (kDa)

5.95

Isoelectric Point (pI)

45.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-XS	PF03470	338 - 376	2.3e-07	XS zinc finger domain
XS	PF03468	409 - 523	5.6e-34	XS domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002538)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23570 AT5G23570 AT5G23570 AT5G23570
fragaria_vesca	FvH4_1g25920 FvH4_5g23140 FvH4_5g23140
malus_domestica	MD03G1212700.v1.1 MD03G1233800.v1.1 MD06G1181900.v1.1 MD14G1187800.v1.1
prunus_persica	Prupe.4G288400_v2.0.a1 Prupe.4G288400_v2.0.a1 Prupe.4G288400_v2.0.a1 Prupe.4G289100_v2.0.a1 Prupe.5G027600_v2.0.a1 Prupe.5G027600_v2.0.a1
pyrus_communis	pycom03g16150 pycom03g18030
rosa_chinensis	RchiOBHm_Chr3g0485061 RchiOBHm_Chr7g0212021
rosa_laevigata	RLG00000002944 RLG00000023171
rosa_multiflora	Rmu_sc0002283.1_g000007 Rmu_sc0006040.1_g000012 Rmu_sc0014812.1_g000006
rosa_roxburghii	Rroxscaffold_3G00247180 Rroxscaffold_6G00397210
rosa_rugosa	Rorug03G0215900 Rorug03G0216000 Rorug03G0216100 Rorug07G0130300
rosa_samantha	Rh3AG266000 Rh3BG301600 Rh3CG299900 Rh3DG295700 Rh7AG263100 Rh7BG257100 Rh7CG279700 Rh7DG269800
rosa_wichuraiana	Rw7G022450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1183
Acc65I	GGTACC	1 cut(s)	1050
AccB1I	GGYRCC	4 cut(s)	5, 1037, 1050, 1383
AccB7I	CCANNNNNTGG	2 cut(s)	1047, 2158
AccI	GTMKAC	1 cut(s)	674
AciI	CCGC	5 cut(s)	574, 710, 1439, 1768, 2095
AclWI	GGATC	4 cut(s)	595, 986, 1233, 1500
AcoI	YGGCCR	2 cut(s)	1241, 1963
AcsI	RAATTY	2 cut(s)	884, 947
AcuI	CTGAAG	4 cut(s)	390, 1318, 1628, 2205
AfaI	GTAC	5 cut(s)	496, 1052, 1173, 1547, 2168
AfiI	CCNNNNNNNGG	3 cut(s)	1047, 2020, 2158
AflII	CTTAAG	1 cut(s)	383
AgsI	TTSAA	7 cut(s)	55, 330, 1098, 1277, 1693, 1736, 1864
AjnI	CCWGG	4 cut(s)	423, 1033, 1268, 1519
AjuI	GAANNNNNNNTTGG	4 cut(s)	1550, 1582, 1728, 1760
AloI	GAACNNNNNNTCC	2 cut(s)	47, 79
Alw26I	GTCTC	5 cut(s)	253, 370, 441, 1403, 1746
AlwI	GGATC	4 cut(s)	595, 986, 1233, 1500
AlwNI	CAGNNNCTG	1 cut(s)	152
AoxI	GGCC	2 cut(s)	1241, 1963
ApoI	RAATTY	2 cut(s)	884, 947
AseI	ATTAAT	1 cut(s)	987
Asp700I	GAANNNNTTC	2 cut(s)	59, 2132
Asp718I	GGTACC	1 cut(s)	1050
AspS9I	GGNCC	7 cut(s)	135, 171, 736, 785, 1031, 1373, 1806
AsuHPI	GGTGA	6 cut(s)	118, 197, 236, 869, 1193, 1960
AvaII	GGWCC	7 cut(s)	135, 171, 736, 785, 1031, 1373, 1806
AxyI	CCTNAGG	1 cut(s)	780
BaeGI	GKGCMC	2 cut(s)	8, 1386
BaeI	ACNNNNGTAYC	2 cut(s)	1155, 1188
BalI	TGGCCA	2 cut(s)	1243, 1965
BanI	GGYRCC	4 cut(s)	5, 1037, 1050, 1383
BanII	GRGCYC	3 cut(s)	24, 431, 1062
BccI	CCATC	7 cut(s)	97, 437, 738, 824, 848, 959, 2020
BciT130I	CCWGG	4 cut(s)	425, 1035, 1270, 1521
BcoDI	GTCTC	5 cut(s)	253, 370, 441, 1403, 1746
BfaI	CTAG	7 cut(s)	132, 636, 681, 759, 900, 921, 1359
BfmI	CTRYAG	3 cut(s)	702, 1164, 1925
BfrI	CTTAAG	1 cut(s)	383
BfuAI	ACCTGC	1 cut(s)	1183
BmcAI	AGTACT	2 cut(s)	496, 2168
Bme1390I	CCNGG	4 cut(s)	425, 1035, 1270, 1521
Bme18I	GGWCC	7 cut(s)	135, 171, 736, 785, 1031, 1373, 1806
BmgT120I	GGNCC	7 cut(s)	135, 171, 736, 785, 1031, 1373, 1806
BmrFI	CCNGG	4 cut(s)	425, 1035, 1270, 1521
BmrI	ACTGGG	2 cut(s)	460, 2113
BmsI	GCATC	8 cut(s)	544, 626, 838, 886, 1424, 1474, 1888, 2128
BmuI	ACTGGG	2 cut(s)	460, 2113
BpmI	CTGGAG	3 cut(s)	212, 1046, 2144
Bpu10I	CCTNAGC	1 cut(s)	1902
BpuEI	CTTGAG	1 cut(s)	926
BsaBI	GATNNNNATC	1 cut(s)	870
BsaJI	CCNNGG	9 cut(s)	220, 424, 509, 739, 913, 1054, 1387, 1591, 2172
BsaXI	ACNNNNNCTCC	4 cut(s)	47, 77, 568, 598
Bsc4I	CCNNNNNNNGG	3 cut(s)	1047, 2020, 2158
Bse1I	ACTGG	8 cut(s)	180, 267, 455, 738, 755, 1052, 2008, 2108
Bse21I	CCTNAGG	1 cut(s)	780
Bse3DI	GCAATG	2 cut(s)	1560, 2094
Bse8I	GATNNNNATC	1 cut(s)	870
BseBI	CCWGG	4 cut(s)	425, 1035, 1270, 1521
BseDI	CCNNGG	9 cut(s)	220, 424, 509, 739, 913, 1054, 1387, 1591, 2172
BseJI	GATNNNNATC	1 cut(s)	870
BseLI	CCNNNNNNNGG	3 cut(s)	1047, 2020, 2158
BseMI	GCAATG	2 cut(s)	1560, 2094
BseMII	CTCAG	3 cut(s)	331, 572, 2193
BseNI	ACTGG	8 cut(s)	180, 267, 455, 738, 755, 1052, 2008, 2108
BseRI	GAGGAG	6 cut(s)	470, 995, 1157, 1168, 2123, 2126
BseSI	GKGCMC	2 cut(s)	8, 1386
BseYI	CCCAGC	3 cut(s)	602, 647, 2151
BsgI	GTGCAG	1 cut(s)	1433
BshFI	GGCC	2 cut(s)	1243, 1965
BshNI	GGYRCC	4 cut(s)	5, 1037, 1050, 1383
BslFI	GGGAC	4 cut(s)	184, 558, 771, 2063
BslI	CCNNNNNNNGG	3 cut(s)	1047, 2020, 2158
BsmAI	GTCTC	5 cut(s)	253, 370, 441, 1403, 1746
BsmFI	GGGAC	4 cut(s)	184, 558, 771, 2063
BsmI	GAATGC	2 cut(s)	613, 1585
BsnI	GGCC	2 cut(s)	1243, 1965
Bsp1286I	GDGCHC	5 cut(s)	8, 24, 431, 1062, 1386
Bsp143I	GATC	8 cut(s)	154, 285, 587, 871, 991, 1225, 1492, 1648
Bsp19I	CCATGG	4 cut(s)	220, 509, 739, 913
BspACI	CCGC	5 cut(s)	574, 710, 1439, 1768, 2095
BspANI	GGCC	2 cut(s)	1243, 1965
BspCNI	CTCAG	3 cut(s)	330, 571, 2194
BspHI	TCATGA	3 cut(s)	1071, 1228, 1885
BspMAI	CTGCAG	1 cut(s)	1929
BspMI	ACCTGC	1 cut(s)	1183
BspPI	GGATC	4 cut(s)	595, 986, 1233, 1500
BspT107I	GGYRCC	4 cut(s)	5, 1037, 1050, 1383
BspTI	CTTAAG	1 cut(s)	383
BsrDI	GCAATG	2 cut(s)	1560, 2094
BsrI	ACTGG	8 cut(s)	180, 267, 455, 738, 755, 1052, 2008, 2108
BssECI	CCNNGG	9 cut(s)	220, 424, 509, 739, 913, 1054, 1387, 1591, 2172
BssMI	GATC	8 cut(s)	154, 285, 587, 871, 991, 1225, 1492, 1648
BssT1I	CCWWGG	6 cut(s)	220, 509, 739, 913, 1591, 2172
Bst2UI	CCWGG	4 cut(s)	425, 1035, 1270, 1521
Bst4CI	ACNGT	6 cut(s)	230, 1013, 1168, 1213, 1388, 1539
Bst6I	CTCTTC	2 cut(s)	1731, 1830
BstAFI	CTTAAG	1 cut(s)	383
BstAPI	GCANNNNNTGC	1 cut(s)	599
BstC8I	GCNNGC	5 cut(s)	198, 1021, 1125, 1722, 1967
BstDEI	CTNAG	8 cut(s)	276, 317, 558, 780, 1652, 1830, 1902, 2202
BstDSI	CCRYGG	5 cut(s)	220, 509, 739, 913, 1387
BstKTI	GATC	8 cut(s)	157, 288, 590, 874, 994, 1228, 1495, 1651
BstMAI	GTCTC	5 cut(s)	253, 370, 441, 1403, 1746
BstMBI	GATC	8 cut(s)	154, 285, 587, 871, 991, 1225, 1492, 1648
BstMWI	GCNNNNNNNGC	8 cut(s)	571, 599, 608, 623, 1184, 1355, 1933, 1936
BstNI	CCWGG	4 cut(s)	425, 1035, 1270, 1521
BstNSI	RCATGY	4 cut(s)	365, 719, 1724, 2056
BstSCI	CCNGG	4 cut(s)	423, 1033, 1268, 1519
BstSFI	CTRYAG	3 cut(s)	702, 1164, 1925
BstSLI	GKGCMC	2 cut(s)	8, 1386
BstXI	CCANNNNNNTGG	1 cut(s)	16
Bsu36I	CCTNAGG	1 cut(s)	780
BsuRI	GGCC	2 cut(s)	1243, 1965
BtgI	CCRYGG	5 cut(s)	220, 509, 739, 913, 1387
BtsI	GCAGTG	2 cut(s)	75, 1010
BtsIMutI	CAGTG	7 cut(s)	75, 187, 731, 1009, 1010, 2015, 2101
BveI	ACCTGC	1 cut(s)	1183
Cac8I	GCNNGC	5 cut(s)	198, 1021, 1125, 1722, 1967
CaiI	CAGNNNCTG	1 cut(s)	152
CciI	TCATGA	3 cut(s)	1071, 1228, 1885
Cfr13I	GGNCC	7 cut(s)	135, 171, 736, 785, 1031, 1373, 1806
CseI	GACGC	2 cut(s)	1433, 1520
Csp6I	GTAC	5 cut(s)	495, 1051, 1172, 1546, 2167
CviQI	GTAC	5 cut(s)	495, 1051, 1172, 1546, 2167
DdeI	CTNAG	8 cut(s)	276, 317, 558, 780, 1652, 1830, 1902, 2202
DpnI	GATC	8 cut(s)	156, 287, 589, 873, 993, 1227, 1494, 1650
DpnII	GATC	8 cut(s)	154, 285, 587, 871, 991, 1225, 1492, 1648
EaeI	YGGCCR	2 cut(s)	1241, 1963
Eam1104I	CTCTTC	2 cut(s)	1731, 1830
EarI	CTCTTC	2 cut(s)	1731, 1830
EciI	GGCGGA	1 cut(s)	1454
Eco130I	CCWWGG	6 cut(s)	220, 509, 739, 913, 1591, 2172
Eco24I	GRGCYC	3 cut(s)	24, 431, 1062
Eco32I	GATATC	1 cut(s)	111
Eco47I	GGWCC	7 cut(s)	135, 171, 736, 785, 1031, 1373, 1806
Eco57I	CTGAAG	4 cut(s)	390, 1318, 1628, 2205
Eco81I	CCTNAGG	1 cut(s)	780
EcoO109I	RGGNCCY	3 cut(s)	135, 785, 1031
EcoRII	CCWGG	4 cut(s)	423, 1033, 1268, 1519
EcoRV	GATATC	1 cut(s)	111
EcoT14I	CCWWGG	6 cut(s)	220, 509, 739, 913, 1591, 2172
EcoT38I	GRGCYC	3 cut(s)	24, 431, 1062
ErhI	CCWWGG	6 cut(s)	220, 509, 739, 913, 1591, 2172
FalI	AAGNNNNNCTT	6 cut(s)	514, 546, 1308, 1340, 1728, 1760
FaqI	GGGAC	4 cut(s)	184, 558, 771, 2063
FauI	CCCGC	1 cut(s)	717
FblI	GTMKAC	1 cut(s)	674
FriOI	GRGCYC	3 cut(s)	24, 431, 1062
FspBI	CTAG	7 cut(s)	132, 636, 681, 759, 900, 921, 1359
GsaI	CCCAGC	3 cut(s)	606, 651, 2155
GsuI	CTGGAG	3 cut(s)	212, 1046, 2144
HaeIII	GGCC	2 cut(s)	1243, 1965
HgaI	GACGC	2 cut(s)	1433, 1520
HincII	GTYRAC	1 cut(s)	1535
HindII	GTYRAC	1 cut(s)	1535
HphI	GGTGA	6 cut(s)	118, 197, 236, 869, 1193, 1960
Hpy166II	GTNNAC	2 cut(s)	675, 1535
Hpy188I	TCNGA	8 cut(s)	154, 370, 561, 847, 865, 880, 895, 2203
Hpy8I	GTNNAC	2 cut(s)	675, 1535
Hpy99I	CGWCG	1 cut(s)	286
HpyAV	CCTTC	6 cut(s)	82, 239, 1630, 1904, 1939, 1980
HpyCH4III	ACNGT	6 cut(s)	230, 1013, 1168, 1213, 1388, 1539
HpyCH4V	TGCA	9 cut(s)	45, 236, 503, 1421, 1450, 1724, 1927, 1997, 2087
HpyF10VI	GCNNNNNNNGC	8 cut(s)	571, 599, 608, 623, 1184, 1355, 1933, 1936
HpyF3I	CTNAG	8 cut(s)	276, 317, 558, 780, 1652, 1830, 1902, 2202
KflI	GGGWCCC	1 cut(s)	785
KpnI	GGTACC	1 cut(s)	1054
Kzo9I	GATC	8 cut(s)	154, 285, 587, 871, 991, 1225, 1492, 1648
LmnI	GCTCC	8 cut(s)	19, 193, 576, 1065, 1116, 1441, 1770, 1933
LweI	GCATC	8 cut(s)	544, 626, 838, 886, 1424, 1474, 1888, 2128
MaeI	CTAG	7 cut(s)	132, 636, 681, 759, 900, 921, 1359
MaeIII	GTNAC	3 cut(s)	224, 1146, 1956
MalI	GATC	8 cut(s)	156, 287, 589, 873, 993, 1227, 1494, 1650
MboI	GATC	8 cut(s)	154, 285, 587, 871, 991, 1225, 1492, 1648
MboII	GAAGA	9 cut(s)	254, 490, 803, 940, 1705, 1748, 1835, 1847, 1919
MfeI	CAATTG	1 cut(s)	90
MhlI	GDGCHC	5 cut(s)	8, 24, 431, 1062, 1386
MlsI	TGGCCA	2 cut(s)	1243, 1965
MluNI	TGGCCA	2 cut(s)	1243, 1965
MlyI	GAGTC	6 cut(s)	143, 261, 409, 884, 1405, 1748
Mox20I	TGGCCA	2 cut(s)	1243, 1965
MroXI	GAANNNNTTC	2 cut(s)	59, 2132
MscI	TGGCCA	2 cut(s)	1243, 1965
MseI	TTAA	7 cut(s)	68, 384, 971, 987, 1578, 1707, 2147
MslI	CAYNNNNRTG	2 cut(s)	1368, 1553
Msp20I	TGGCCA	2 cut(s)	1243, 1965
MspA1I	CMGCKG	1 cut(s)	2192
MspCI	CTTAAG	1 cut(s)	383
MspR9I	CCNGG	4 cut(s)	425, 1035, 1270, 1521
MunI	CAATTG	1 cut(s)	90
Mva1269I	GAATGC	2 cut(s)	613, 1585
MvaI	CCWGG	4 cut(s)	425, 1035, 1270, 1521
MwoI	GCNNNNNNNGC	8 cut(s)	571, 599, 608, 623, 1184, 1355, 1933, 1936
NcoI	CCATGG	4 cut(s)	220, 509, 739, 913
NdeII	GATC	8 cut(s)	154, 285, 587, 871, 991, 1225, 1492, 1648
NmeAIII	GCCGAG	1 cut(s)	138
NmuCI	GTSAC	2 cut(s)	224, 1956
NspI	RCATGY	4 cut(s)	365, 719, 1724, 2056
PaeI	GCATGC	1 cut(s)	1724
PagI	TCATGA	3 cut(s)	1071, 1228, 1885
PcsI	WCGNNNNNNNCGW	1 cut(s)	1501
PctI	GAATGC	2 cut(s)	613, 1585
PdmI	GAANNNNTTC	2 cut(s)	59, 2132
PfeI	GAWTC	6 cut(s)	60, 632, 860, 931, 1312, 1889
PflMI	CCANNNNNTGG	2 cut(s)	1047, 2158
PfoI	TCCNGGA	1 cut(s)	1519
PleI	GAGTC	6 cut(s)	143, 260, 408, 884, 1404, 1747
PpsI	GAGTC	6 cut(s)	143, 260, 408, 884, 1404, 1747
PpuMI	RGGWCCY	3 cut(s)	135, 785, 1031
PshBI	ATTAAT	1 cut(s)	987
Psp5II	RGGWCCY	3 cut(s)	135, 785, 1031
Psp6I	CCWGG	4 cut(s)	423, 1033, 1268, 1519
PspFI	CCCAGC	3 cut(s)	602, 647, 2151
PspGI	CCWGG	4 cut(s)	423, 1033, 1268, 1519
PspPI	GGNCC	7 cut(s)	135, 171, 736, 785, 1031, 1373, 1806
PspPPI	RGGWCCY	3 cut(s)	135, 785, 1031
PstI	CTGCAG	1 cut(s)	1929
PstNI	CAGNNNCTG	1 cut(s)	152
PvuII	CAGCTG	1 cut(s)	2192
RsaI	GTAC	5 cut(s)	496, 1052, 1173, 1547, 2168
RsaNI	GTAC	5 cut(s)	495, 1051, 1172, 1546, 2167
RseI	CAYNNNNRTG	2 cut(s)	1368, 1553
SaqAI	TTAA	7 cut(s)	68, 384, 971, 987, 1578, 1707, 2147
Sau3AI	GATC	8 cut(s)	154, 285, 587, 871, 991, 1225, 1492, 1648
Sau96I	GGNCC	7 cut(s)	135, 171, 736, 785, 1031, 1373, 1806
ScaI	AGTACT	2 cut(s)	496, 2168
SchI	GAGTC	6 cut(s)	143, 261, 409, 884, 1405, 1748
ScrFI	CCNGG	4 cut(s)	425, 1035, 1270, 1521
SduI	GDGCHC	5 cut(s)	8, 24, 431, 1062, 1386
SfaNI	GCATC	8 cut(s)	544, 626, 838, 886, 1424, 1474, 1888, 2128
SfcI	CTRYAG	3 cut(s)	702, 1164, 1925
SinI	GGWCC	7 cut(s)	135, 171, 736, 785, 1031, 1373, 1806
SmiMI	CAYNNNNRTG	2 cut(s)	1368, 1553
SmlI	CTYRAG	2 cut(s)	383, 941
SmoI	CTYRAG	2 cut(s)	383, 941
SphI	GCATGC	1 cut(s)	1724
SsiI	CCGC	5 cut(s)	574, 710, 1439, 1768, 2095
SspI	AATATT	1 cut(s)	1407
SspMI	CTAG	7 cut(s)	132, 636, 681, 759, 900, 921, 1359
StyD4I	CCNGG	4 cut(s)	423, 1033, 1268, 1519
StyI	CCWWGG	6 cut(s)	220, 509, 739, 913, 1591, 2172
TaaI	ACNGT	6 cut(s)	230, 1013, 1168, 1213, 1388, 1539
TaqI	TCGA	6 cut(s)	101, 140, 215, 334, 476, 2136
TaqII	GACCGA	1 cut(s)	2108
TatI	WGTACW	2 cut(s)	494, 2166
TfiI	GAWTC	6 cut(s)	60, 632, 860, 931, 1312, 1889
Tru1I	TTAA	7 cut(s)	68, 384, 971, 987, 1578, 1707, 2147
Tru9I	TTAA	7 cut(s)	68, 384, 971, 987, 1578, 1707, 2147
TscAI	CASTG	7 cut(s)	82, 187, 738, 1010, 1016, 2015, 2108
TseFI	GTSAC	2 cut(s)	224, 1956
Tsp45I	GTSAC	2 cut(s)	224, 1956
TspGWI	ACGGA	1 cut(s)	1165
TspRI	CASTG	7 cut(s)	82, 187, 738, 1010, 1016, 2015, 2108
Van91I	CCANNNNNTGG	2 cut(s)	1047, 2158
Vha464I	CTTAAG	1 cut(s)	383
VpaK11BI	GGWCC	7 cut(s)	135, 171, 736, 785, 1031, 1373, 1806
VspI	ATTAAT	1 cut(s)	987
XapI	RAATTY	2 cut(s)	884, 947
XbaI	TCTAGA	1 cut(s)	635
XceI	RCATGY	4 cut(s)	365, 719, 1724, 2056
XcmI	CCANNNNNNNNNTGG	2 cut(s)	187, 1031
XmiI	GTMKAC	1 cut(s)	674
XmnI	GAANNNNTTC	2 cut(s)	59, 2132
XspI	CTAG	7 cut(s)	132, 636, 681, 759, 900, 921, 1359
ZrmI	AGTACT	2 cut(s)	496, 2168

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.