Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0002538

Physical Location & Seq

Genomic Coordinates Forward (+)

18881468 .. 18886656

Gene Structure 5189 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00397210.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

ATGAGTTCAAGTCGAGGTGGTGGCAATCCCAAAGGAAAGCAGGTCTCTGAAGTCAATAGCCTTAAGGTTGAGCAGTTGAGTCAGGATATAGGAGAAATTGACCTGGGCTCAACGCAAGATGATGGAGACTGGGAGGAGGTAGTTGGCAGGAAATCGAAGAACAGGGCTGGAAGTACTACTGCAAAACCATGGGGTTCTCAAAGTTCTACTTCTAAATCTTGGGGACAGCAAGATGCTCAGAAGCCAGGTATGCGGAGCATTGGTGGATCAGCACGGGCTGCTGGGAATGCTTGGGCATCACAAGCTGCTGATTCTAGAAAATCGGCTGGGAGAGGAAATGTCTGGCAGCAGTCTACTCCTAGGAGTTTTGATAATAGGTCTGTGGCCCCGCAGCATGTAATTCCTCCCCCACTGGACCATGGATGGAACTGGCAGTCTAGGGCTGGTTCCACTCAACCTAAGGGTCCCGAAGATGACAAAAACAGCTATGTGGCTGCTGTGGATGATGATGGGGATGAATTATCTGATGCTGATGGTGATTCTGATGATGATCTATCTGATGAATTTGACTCGGATGCAAGTGTAAAGAGTCATGGAACTAGAAAGAAGAATCGGTTGCTCAAGAAATTTTTTGAGGTATTGGATGGCTTAACTATTGAGGAGATTAATGATCCTGTGAGGCAGTGGCACTGTCCTGCTTGCCAAAACGGCCCTGGTGCCATTGACTGGTACCGAGGGCTCCAGCCCCTCATGACCCATGCCAAGACTAAAGGTTCAATAAGGGCGAGGCTCCACAGAGAGCTTGCTGAACTTTTGGATGAGGAGTTACGGAGGAGGGGAACTACAGTTGTACCTGCTGGTGAAGCATTTGGAAAATGGAAAGGTCTAACAGTTGAGGAAAAGGATCATGAAATTGTGTGGCCACCAATGGTTATTATTATGAATACCAGGCTTGAACAGGATGATAACGACAAGTGGATAGGCATGGGGAATCAAGAGCTGCTTGACTACTTCAGCTCGTATGCTGCTGTGAGGGCTAGACACTCTTATGGACCACAGGGGCACCGTGGCATGAGTCTCCTAATATTTGAGGCATCTGCAAGAGGTTATTTTGAGGCGGAGCGTCTGCACAGGCATTTTATAGAGCAAAGGACAGACAGGGATGCTTGGGATCGTAGTAGTCGTGTCTTATTTCATCCAGGAGGGCAGCGTCAACTGTATGGGTACATGGCAATGAAAGATGACTTGGATATATTTAACCAACATTCCCAAGGTAAAGCCAAGCTGAAGTTTGAGATGAGGTCATATCAGGAGAAGGTTGTGAATGATCTTAGGCAAATGAGCGAGGACAATCAACAGCTTATCTGGTTGAAGAACAGGGTTGTTAAAGAACAGAGGCATGCAAAAGCTCTTGAAGAGTCTCTTGGTATTGTTAGTGAGAAGCTCCGCAAAACAACAGAGGAAAATCGTATTGTAAGACACAGGACCAAAACCCAACATGAAGAAACTAAGGAAGAGATGTATGAGCAAGAACAATTTTTCAAAGACCAAATCAAAATCATTAATGAATCAAGGGATGCTAAGGAAGAAGGTTTTGAGAGGCTGCAGCAGGAGCAGCGTGAGAAGGTGAAGCAGTCACATGGCCAGCCTTCACTTGACAGGTTGGTGGAAATTGCAAACTTCATCCAGTGCCAAGATAAGGAGATGGAGGATTTTGTGGCAGAGAGGGACATGCTGATAAAAGTTCATGGAGAGAACAAGGCTGCAATGAAGCGGAGGCACTGGGAGGAGGAGGTCGGTCTGGAGAAAGATTTCAATGCCAAATTAACCCAGCTCATGGATAAGTACTCCAAGGTTCAGCCTGAAGCAGCTGCGAACGTTGAGGGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005655 GO:0005730 GO:0005737 GO:0005783 GO:0005829 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009605 GO:0009607 GO:0009615 GO:0009616 GO:0009791 GO:0009892 GO:0009987 GO:0010025 GO:0010033 GO:0010050 GO:0010166 GO:0010267 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0012505 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019222 GO:0030422 GO:0030677 GO:0030681 GO:0031047 GO:0031050 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0035194 GO:0035821 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043331 GO:0044003 GO:0044237 GO:0044238 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044452 GO:0044464 GO:0045087 GO:0046483 GO:0048519 GO:0048856 GO:0050789 GO:0050896 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052018 GO:0052249 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0098542 GO:0098586 GO:1901360 GO:1901568 GO:1901570 GO:1901576 GO:1901698 GO:1901699 GO:1902494 GO:1902555 GO:1905348 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

XS zf-XS

Protein Analysis

629

Amino Acids

71.72

Weight (kDa)

5.96

Isoelectric Point (pI)

46.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-XS	PF03470	231 - 269	4.3e-08	XS zinc finger domain
XS	PF03468	302 - 416	4.4e-34	XS domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002538)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23570 AT5G23570 AT5G23570 AT5G23570
fragaria_vesca	FvH4_1g25920 FvH4_5g23140 FvH4_5g23140
malus_domestica	MD03G1212700.v1.1 MD03G1233800.v1.1 MD06G1181900.v1.1 MD14G1187800.v1.1
prunus_persica	Prupe.4G288400_v2.0.a1 Prupe.4G288400_v2.0.a1 Prupe.4G288400_v2.0.a1 Prupe.4G289100_v2.0.a1 Prupe.5G027600_v2.0.a1 Prupe.5G027600_v2.0.a1
pyrus_communis	pycom03g16150 pycom03g18030
rosa_chinensis	RchiOBHm_Chr3g0485061 RchiOBHm_Chr7g0212021
rosa_laevigata	RLG00000002944 RLG00000023171
rosa_multiflora	Rmu_sc0002283.1_g000007 Rmu_sc0006040.1_g000012 Rmu_sc0014812.1_g000006
rosa_roxburghii	Rroxscaffold_3G00247180 Rroxscaffold_6G00397210
rosa_rugosa	Rorug03G0215900 Rorug03G0216000 Rorug03G0216100 Rorug07G0130300
rosa_samantha	Rh3AG266000 Rh3BG301600 Rh3CG299900 Rh3DG295700 Rh7AG263100 Rh7BG257100 Rh7CG279700 Rh7DG269800
rosa_wichuraiana	Rw7G022450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	31, 862
Acc65I	GGTACC	1 cut(s)	729
AccB1I	GGYRCC	3 cut(s)	716, 729, 1062
AccB7I	CCANNNNNTGG	2 cut(s)	726, 1837
AccI	GTMKAC	1 cut(s)	353
AciI	CCGC	5 cut(s)	253, 389, 1118, 1447, 1774
AclI	AACGTT	1 cut(s)	1878
AclWI	GGATC	4 cut(s)	274, 665, 912, 1179
AcoI	YGGCCR	2 cut(s)	920, 1642
AcsI	RAATTY	2 cut(s)	563, 626
AcuI	CTGAAG	4 cut(s)	69, 997, 1307, 1884
AfaI	GTAC	5 cut(s)	175, 731, 852, 1226, 1847
AfiI	CCNNNNNNNGG	3 cut(s)	726, 1699, 1837
AflII	CTTAAG	1 cut(s)	62
AgsI	TTSAA	7 cut(s)	9, 777, 956, 1372, 1415, 1543, 1816
AjnI	CCWGG	5 cut(s)	102, 244, 712, 947, 1198
AjuI	GAANNNNNNNTTGG	4 cut(s)	1229, 1261, 1407, 1439
Alw26I	GTCTC	4 cut(s)	49, 120, 1082, 1425
AlwI	GGATC	4 cut(s)	274, 665, 912, 1179
AoxI	GGCC	4 cut(s)	384, 709, 920, 1642
ApoI	RAATTY	2 cut(s)	563, 626
AseI	ATTAAT	2 cut(s)	666, 1563
Asp700I	GAANNNNTTC	1 cut(s)	1811
Asp718I	GGTACC	1 cut(s)	729
AspA2I	CCTAGG	1 cut(s)	359
AspS9I	GGNCC	6 cut(s)	385, 415, 464, 710, 1052, 1485
AsuHPI	GGTGA	3 cut(s)	548, 872, 1639
AvaII	GGWCC	4 cut(s)	415, 464, 1052, 1485
AvrII	CCTAGG	1 cut(s)	359
AxyI	CCTNAGG	1 cut(s)	459
BaeGI	GKGCMC	1 cut(s)	1065
BaeI	ACNNNNGTAYC	2 cut(s)	834, 867
BalI	TGGCCA	2 cut(s)	922, 1644
BanI	GGYRCC	3 cut(s)	716, 729, 1062
BanII	GRGCYC	2 cut(s)	110, 741
BccI	CCATC	6 cut(s)	116, 417, 503, 527, 638, 1699
BceAI	ACGGC	1 cut(s)	724
BciT130I	CCWGG	5 cut(s)	104, 246, 714, 949, 1200
BcoDI	GTCTC	4 cut(s)	49, 120, 1082, 1425
BfaI	CTAG	5 cut(s)	315, 360, 438, 600, 1038
BfmI	CTRYAG	2 cut(s)	843, 1604
BfrI	CTTAAG	1 cut(s)	62
BfuAI	ACCTGC	2 cut(s)	31, 862
BglI	GCCNNNNNGGC	1 cut(s)	708
BlnI	CCTAGG	1 cut(s)	359
BmcAI	AGTACT	2 cut(s)	175, 1847
Bme1390I	CCNGG	5 cut(s)	104, 246, 714, 949, 1200
Bme18I	GGWCC	4 cut(s)	415, 464, 1052, 1485
BmgT120I	GGNCC	6 cut(s)	385, 415, 464, 710, 1052, 1485
BmiI	GGNNCC	9 cut(s)	387, 448, 465, 466, 718, 731, 740, 791, 1064
BmrFI	CCNGG	5 cut(s)	104, 246, 714, 949, 1200
BmrI	ACTGGG	2 cut(s)	139, 1792
BmsI	GCATC	7 cut(s)	223, 305, 517, 565, 1103, 1153, 1567
BmuI	ACTGGG	2 cut(s)	139, 1792
BpmI	CTGGAG	2 cut(s)	725, 1823
Bpu10I	CCTNAGC	1 cut(s)	1581
BpuEI	CTTGAG	1 cut(s)	605
BsaBI	GATNNNNATC	1 cut(s)	549
BsaI	GGTCTC	1 cut(s)	49
BsaJI	CCNNGG	9 cut(s)	103, 188, 359, 418, 712, 733, 1066, 1270, 1851
BsaXI	ACNNNNNCTCC	2 cut(s)	247, 277
Bsc4I	CCNNNNNNNGG	3 cut(s)	726, 1699, 1837
Bse1I	ACTGG	6 cut(s)	134, 417, 434, 731, 1687, 1787
Bse21I	CCTNAGG	1 cut(s)	459
Bse3DI	GCAATG	2 cut(s)	1239, 1773
Bse8I	GATNNNNATC	1 cut(s)	549
BseBI	CCWGG	5 cut(s)	104, 246, 714, 949, 1200
BseDI	CCNNGG	9 cut(s)	103, 188, 359, 418, 712, 733, 1066, 1270, 1851
BseJI	GATNNNNATC	1 cut(s)	549
BseLI	CCNNNNNNNGG	3 cut(s)	726, 1699, 1837
BseMI	GCAATG	2 cut(s)	1239, 1773
BseMII	CTCAG	1 cut(s)	251
BseNI	ACTGG	6 cut(s)	134, 417, 434, 731, 1687, 1787
BseRI	GAGGAG	6 cut(s)	149, 674, 836, 847, 1802, 1805
BseSI	GKGCMC	1 cut(s)	1065
BseYI	CCCAGC	3 cut(s)	281, 326, 1830
BsgI	GTGCAG	1 cut(s)	1112
BshFI	GGCC	4 cut(s)	386, 711, 922, 1644
BshNI	GGYRCC	3 cut(s)	716, 729, 1062
BslFI	GGGAC	3 cut(s)	237, 450, 1742
BslI	CCNNNNNNNGG	3 cut(s)	726, 1699, 1837
BsmAI	GTCTC	4 cut(s)	49, 120, 1082, 1425
BsmFI	GGGAC	3 cut(s)	237, 450, 1742
BsmI	GAATGC	1 cut(s)	292
BsnI	GGCC	4 cut(s)	386, 711, 922, 1644
Bso31I	GGTCTC	1 cut(s)	49
Bsp1286I	GDGCHC	3 cut(s)	110, 741, 1065
Bsp143I	GATC	6 cut(s)	266, 550, 670, 904, 1171, 1327
Bsp19I	CCATGG	2 cut(s)	188, 418
BspACI	CCGC	5 cut(s)	253, 389, 1118, 1447, 1774
BspANI	GGCC	4 cut(s)	386, 711, 922, 1644
BspCNI	CTCAG	1 cut(s)	250
BspHI	TCATGA	2 cut(s)	750, 907
BspLI	GGNNCC	9 cut(s)	387, 448, 465, 466, 718, 731, 740, 791, 1064
BspMAI	CTGCAG	1 cut(s)	1608
BspMI	ACCTGC	2 cut(s)	31, 862
BspPI	GGATC	4 cut(s)	274, 665, 912, 1179
BspT107I	GGYRCC	3 cut(s)	716, 729, 1062
BspTI	CTTAAG	1 cut(s)	62
BspTNI	GGTCTC	1 cut(s)	49
BsrDI	GCAATG	2 cut(s)	1239, 1773
BsrI	ACTGG	6 cut(s)	134, 417, 434, 731, 1687, 1787
BssECI	CCNNGG	9 cut(s)	103, 188, 359, 418, 712, 733, 1066, 1270, 1851
BssMI	GATC	6 cut(s)	266, 550, 670, 904, 1171, 1327
BssT1I	CCWWGG	5 cut(s)	188, 359, 418, 1270, 1851
Bst2UI	CCWGG	5 cut(s)	104, 246, 714, 949, 1200
Bst4CI	ACNGT	5 cut(s)	692, 847, 892, 1067, 1218
Bst6I	CTCTTC	2 cut(s)	1410, 1509
BstAFI	CTTAAG	1 cut(s)	62
BstAPI	GCANNNNNTGC	1 cut(s)	278
BstC8I	GCNNGC	4 cut(s)	700, 804, 1401, 1646
BstDEI	CTNAG	5 cut(s)	237, 459, 1331, 1509, 1581
BstDSI	CCRYGG	3 cut(s)	188, 418, 1066
BstKTI	GATC	6 cut(s)	269, 553, 673, 907, 1174, 1330
BstMAI	GTCTC	4 cut(s)	49, 120, 1082, 1425
BstMBI	GATC	6 cut(s)	266, 550, 670, 904, 1171, 1327
BstMWI	GCNNNNNNNGC	9 cut(s)	250, 278, 287, 302, 708, 863, 1034, 1612, 1615
BstNI	CCWGG	5 cut(s)	104, 246, 714, 949, 1200
BstNSI	RCATGY	3 cut(s)	398, 1403, 1735
BstSCI	CCNGG	5 cut(s)	102, 244, 712, 947, 1198
BstSFI	CTRYAG	2 cut(s)	843, 1604
BstSLI	GKGCMC	1 cut(s)	1065
Bsu36I	CCTNAGG	1 cut(s)	459
BsuRI	GGCC	4 cut(s)	386, 711, 922, 1644
BtgI	CCRYGG	3 cut(s)	188, 418, 1066
BtsI	GCAGTG	1 cut(s)	689
BtsIMutI	CAGTG	5 cut(s)	410, 688, 689, 1694, 1780
BveI	ACCTGC	2 cut(s)	31, 862
Cac8I	GCNNGC	4 cut(s)	700, 804, 1401, 1646
CciI	TCATGA	2 cut(s)	750, 907
Cfr13I	GGNCC	6 cut(s)	385, 415, 464, 710, 1052, 1485
CseI	GACGC	2 cut(s)	1112, 1199
Csp6I	GTAC	5 cut(s)	174, 730, 851, 1225, 1846
CviQI	GTAC	5 cut(s)	174, 730, 851, 1225, 1846
DdeI	CTNAG	5 cut(s)	237, 459, 1331, 1509, 1581
DpnI	GATC	6 cut(s)	268, 552, 672, 906, 1173, 1329
DpnII	GATC	6 cut(s)	266, 550, 670, 904, 1171, 1327
EaeI	YGGCCR	2 cut(s)	920, 1642
Eam1104I	CTCTTC	2 cut(s)	1410, 1509
EarI	CTCTTC	2 cut(s)	1410, 1509
EciI	GGCGGA	1 cut(s)	1133
Eco130I	CCWWGG	5 cut(s)	188, 359, 418, 1270, 1851
Eco24I	GRGCYC	2 cut(s)	110, 741
Eco31I	GGTCTC	1 cut(s)	49
Eco47I	GGWCC	4 cut(s)	415, 464, 1052, 1485
Eco57I	CTGAAG	4 cut(s)	69, 997, 1307, 1884
Eco81I	CCTNAGG	1 cut(s)	459
EcoO109I	RGGNCCY	1 cut(s)	464
EcoRII	CCWGG	5 cut(s)	102, 244, 712, 947, 1198
EcoT14I	CCWWGG	5 cut(s)	188, 359, 418, 1270, 1851
EcoT38I	GRGCYC	2 cut(s)	110, 741
ErhI	CCWWGG	5 cut(s)	188, 359, 418, 1270, 1851
FalI	AAGNNNNNCTT	6 cut(s)	193, 225, 987, 1019, 1407, 1439
FaqI	GGGAC	3 cut(s)	237, 450, 1742
FauI	CCCGC	1 cut(s)	396
FblI	GTMKAC	1 cut(s)	353
FriOI	GRGCYC	2 cut(s)	110, 741
FspBI	CTAG	5 cut(s)	315, 360, 438, 600, 1038
GsaI	CCCAGC	3 cut(s)	285, 330, 1834
GsuI	CTGGAG	2 cut(s)	725, 1823
HaeIII	GGCC	4 cut(s)	386, 711, 922, 1644
HgaI	GACGC	2 cut(s)	1112, 1199
HincII	GTYRAC	1 cut(s)	1214
HindII	GTYRAC	1 cut(s)	1214
HphI	GGTGA	3 cut(s)	548, 872, 1639
Hpy166II	GTNNAC	2 cut(s)	354, 1214
Hpy188I	TCNGA	6 cut(s)	49, 240, 526, 544, 559, 574
Hpy8I	GTNNAC	2 cut(s)	354, 1214
HpyAV	CCTTC	4 cut(s)	1309, 1583, 1618, 1659
HpyCH4III	ACNGT	5 cut(s)	692, 847, 892, 1067, 1218
HpyCH4IV	ACGT	1 cut(s)	1878
HpyCH4V	TGCA	8 cut(s)	182, 578, 1100, 1129, 1403, 1606, 1676, 1766
HpyF10VI	GCNNNNNNNGC	9 cut(s)	250, 278, 287, 302, 708, 863, 1034, 1612, 1615
HpyF3I	CTNAG	5 cut(s)	237, 459, 1331, 1509, 1581
HpySE526I	ACGT	1 cut(s)	1878
KflI	GGGWCCC	1 cut(s)	464
KpnI	GGTACC	1 cut(s)	733
Kzo9I	GATC	6 cut(s)	266, 550, 670, 904, 1171, 1327
LmnI	GCTCC	6 cut(s)	255, 744, 795, 1120, 1449, 1612
LweI	GCATC	7 cut(s)	223, 305, 517, 565, 1103, 1153, 1567
MaeI	CTAG	5 cut(s)	315, 360, 438, 600, 1038
MaeII	ACGT	1 cut(s)	1878
MaeIII	GTNAC	2 cut(s)	825, 1635
MalI	GATC	6 cut(s)	268, 552, 672, 906, 1173, 1329
MboI	GATC	6 cut(s)	266, 550, 670, 904, 1171, 1327
MboII	GAAGA	8 cut(s)	169, 482, 619, 1384, 1427, 1514, 1526, 1598
MhlI	GDGCHC	3 cut(s)	110, 741, 1065
MlsI	TGGCCA	2 cut(s)	922, 1644
MluCI	AATT	9 cut(s)	96, 399, 518, 563, 626, 912, 1535, 1671, 1823
MluNI	TGGCCA	2 cut(s)	922, 1644
MlyI	GAGTC	5 cut(s)	88, 563, 598, 1084, 1427
Mox20I	TGGCCA	2 cut(s)	922, 1644
MroXI	GAANNNNTTC	1 cut(s)	1811
MscI	TGGCCA	2 cut(s)	922, 1644
MseI	TTAA	7 cut(s)	63, 650, 666, 1257, 1386, 1563, 1826
MslI	CAYNNNNRTG	2 cut(s)	1047, 1232
Msp20I	TGGCCA	2 cut(s)	922, 1644
MspA1I	CMGCKG	1 cut(s)	1871
MspCI	CTTAAG	1 cut(s)	62
MspR9I	CCNGG	5 cut(s)	104, 246, 714, 949, 1200
Mva1269I	GAATGC	1 cut(s)	292
MvaI	CCWGG	5 cut(s)	104, 246, 714, 949, 1200
MwoI	GCNNNNNNNGC	9 cut(s)	250, 278, 287, 302, 708, 863, 1034, 1612, 1615
NcoI	CCATGG	2 cut(s)	188, 418
NdeII	GATC	6 cut(s)	266, 550, 670, 904, 1171, 1327
NlaIV	GGNNCC	9 cut(s)	387, 448, 465, 466, 718, 731, 740, 791, 1064
NmuCI	GTSAC	1 cut(s)	1635
NspI	RCATGY	3 cut(s)	398, 1403, 1735
PaeI	GCATGC	1 cut(s)	1403
PagI	TCATGA	2 cut(s)	750, 907
PcsI	WCGNNNNNNNCGW	1 cut(s)	1180
PctI	GAATGC	1 cut(s)	292
PdmI	GAANNNNTTC	1 cut(s)	1811
PfeI	GAWTC	5 cut(s)	311, 539, 610, 991, 1568
PflMI	CCANNNNNTGG	2 cut(s)	726, 1837
PfoI	TCCNGGA	1 cut(s)	1198
PleI	GAGTC	5 cut(s)	87, 563, 597, 1083, 1426
PpsI	GAGTC	5 cut(s)	87, 563, 597, 1083, 1426
PpuMI	RGGWCCY	1 cut(s)	464
PshBI	ATTAAT	2 cut(s)	666, 1563
Psp1406I	AACGTT	1 cut(s)	1878
Psp5II	RGGWCCY	1 cut(s)	464
Psp6I	CCWGG	5 cut(s)	102, 244, 712, 947, 1198
PspFI	CCCAGC	3 cut(s)	281, 326, 1830
PspGI	CCWGG	5 cut(s)	102, 244, 712, 947, 1198
PspN4I	GGNNCC	9 cut(s)	387, 448, 465, 466, 718, 731, 740, 791, 1064
PspPI	GGNCC	6 cut(s)	385, 415, 464, 710, 1052, 1485
PspPPI	RGGWCCY	1 cut(s)	464
PstI	CTGCAG	1 cut(s)	1608
PvuII	CAGCTG	1 cut(s)	1871
RsaI	GTAC	5 cut(s)	175, 731, 852, 1226, 1847
RsaNI	GTAC	5 cut(s)	174, 730, 851, 1225, 1846
RseI	CAYNNNNRTG	2 cut(s)	1047, 1232
SaqAI	TTAA	7 cut(s)	63, 650, 666, 1257, 1386, 1563, 1826
Sau3AI	GATC	6 cut(s)	266, 550, 670, 904, 1171, 1327
Sau96I	GGNCC	6 cut(s)	385, 415, 464, 710, 1052, 1485
ScaI	AGTACT	2 cut(s)	175, 1847
SchI	GAGTC	5 cut(s)	88, 563, 598, 1084, 1427
ScrFI	CCNGG	5 cut(s)	104, 246, 714, 949, 1200
SduI	GDGCHC	3 cut(s)	110, 741, 1065
SfaNI	GCATC	7 cut(s)	223, 305, 517, 565, 1103, 1153, 1567
SfcI	CTRYAG	2 cut(s)	843, 1604
SinI	GGWCC	4 cut(s)	415, 464, 1052, 1485
SmiMI	CAYNNNNRTG	2 cut(s)	1047, 1232
SmlI	CTYRAG	2 cut(s)	62, 620
SmoI	CTYRAG	2 cut(s)	62, 620
SphI	GCATGC	1 cut(s)	1403
Sse9I	AATT	9 cut(s)	96, 399, 518, 563, 626, 912, 1535, 1671, 1823
SsiI	CCGC	5 cut(s)	253, 389, 1118, 1447, 1774
SspI	AATATT	1 cut(s)	1086
SspMI	CTAG	5 cut(s)	315, 360, 438, 600, 1038
StyD4I	CCNGG	5 cut(s)	102, 244, 712, 947, 1198
StyI	CCWWGG	5 cut(s)	188, 359, 418, 1270, 1851
TaaI	ACNGT	5 cut(s)	692, 847, 892, 1067, 1218
TaiI	ACGT	1 cut(s)	1881
TaqI	TCGA	2 cut(s)	13, 155
TaqII	GACCGA	1 cut(s)	1787
TasI	AATT	9 cut(s)	96, 399, 518, 563, 626, 912, 1535, 1671, 1823
TatI	WGTACW	2 cut(s)	173, 1845
TfiI	GAWTC	5 cut(s)	311, 539, 610, 991, 1568
Tru1I	TTAA	7 cut(s)	63, 650, 666, 1257, 1386, 1563, 1826
Tru9I	TTAA	7 cut(s)	63, 650, 666, 1257, 1386, 1563, 1826
TscAI	CASTG	5 cut(s)	417, 689, 695, 1694, 1787
TseFI	GTSAC	1 cut(s)	1635
Tsp45I	GTSAC	1 cut(s)	1635
TspGWI	ACGGA	1 cut(s)	844
TspRI	CASTG	5 cut(s)	417, 689, 695, 1694, 1787
Van91I	CCANNNNNTGG	2 cut(s)	726, 1837
Vha464I	CTTAAG	1 cut(s)	62
VpaK11BI	GGWCC	4 cut(s)	415, 464, 1052, 1485
VspI	ATTAAT	2 cut(s)	666, 1563
XapI	RAATTY	2 cut(s)	563, 626
XbaI	TCTAGA	1 cut(s)	314
XceI	RCATGY	3 cut(s)	398, 1403, 1735
XcmI	CCANNNNNNNNNTGG	1 cut(s)	710
XmaJI	CCTAGG	1 cut(s)	359
XmiI	GTMKAC	1 cut(s)	353
XmnI	GAANNNNTTC	1 cut(s)	1811
XspI	CTAG	5 cut(s)	315, 360, 438, 600, 1038
ZrmI	AGTACT	2 cut(s)	175, 1847

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.