Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0014450

Physical Location & Seq

Genomic Coordinates Reverse (-)

1477157 .. 1479408

Gene Structure 2252 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G013700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 657 bp

ATGGCAGAAAAGAAAGAGAAATTTGGAAGTTCTGAAGCAGCTGCAGGCAGTTCAATGGAGGTCATAGGGATGGGGCCGAGAGACGAAGATGGAAGCAGCAGCAGTAGCAGTAGCAGTAGCAGTAACAGTTTCCGCACAGCTGAGACTTTGCTGCGTCTGCTGCCAATTGGTCCTTGTGTGGCGGCTCTTGTGGTGATGCTTCATGACTCCCAGACCACTGACTTTGGCTCTCTTTCCTACTCCCACATCGGAGCTTTCAGGTACTTGGTGAATGCCAACGGCATTTGTGCCGGATACTCCCTTCTCACCGCTATCATTGCAGCCAAGCCTCGTTCCCCCACCATGTCCCAAGCCTGGGCTTTCTTCTTCCTAGATCATGTGCTGACGTACCTAATTCTGGGTGCTGGAGCTGTGTCAATGGAGGTGCTGTACTTGGCATACAAGGGCAATTCAGACGTGACATGGAGCGCAGCTTGTGGGTCTTTTGGGGGATTCTGTCACAAAGCCACAGCTTCTGTCGCCATTACATTTGTGGTGGTGGCTTGCTATGCACTCATTTCTCTCATTTCCTCCTACAAGCTCTTCAGCAAGTATGATGCTCCTCACCCTGTGGCCAACCCCATCAAAGGCATTCCGACCGCCACCTTCCATGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005488 GO:0007275 GO:0008150 GO:0009628 GO:0009791 GO:0009838 GO:0009908 GO:0010227 GO:0022414 GO:0032501 GO:0032502 GO:0048037 GO:0048367 GO:0048437 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051536 GO:0051540 GO:0061458 GO:0080167 GO:0090567 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF588

Protein Analysis

219

Amino Acids

22.93

Weight (kDa)

6.99

Isoelectric Point (pI)

38.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014450)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17200 AT1G17200
fragaria_vesca	FvH4_5g24950
malus_domestica	MD06G1011400.v1.1
prunus_persica	Prupe.5G013700_v2.0.a1
pyrus_communis	pycom06g00940
rosa_chinensis	RchiOBHm_Chr7g0215251
rosa_laevigata	RLG00000002677
rosa_multiflora	Rmu_sc0002701.1_g000034 Rmu_sc0007904.1_g000026
rosa_roxburghii	Rroxscaffold_3G00244380
rosa_rugosa	Rorug07G0151500
rosa_samantha	Rh7AG288200 Rh7BG280300 Rh7CG308000 Rh7DG291800
rosa_wichuraiana	Rw7G024630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	4 cut(s)	133, 182, 309, 639
AcoI	YGGCCR	1 cut(s)	612
AcsI	RAATTY	1 cut(s)	20
AcuI	CTGAAG	2 cut(s)	54, 568
AdeI	CACNNNGTG	1 cut(s)	610
AfaI	GTAC	3 cut(s)	263, 389, 431
AfiI	CCNNNNNNNGG	4 cut(s)	354, 355, 397, 626
AgsI	TTSAA	1 cut(s)	54
AjiI	CACGTC	1 cut(s)	457
AjnI	CCWGG	1 cut(s)	353
AluBI	AGCT	7 cut(s)	41, 140, 254, 410, 473, 512, 580
AluI	AGCT	7 cut(s)	41, 140, 254, 410, 473, 512, 580
Alw26I	GTCTC	2 cut(s)	75, 137
AlwNI	CAGNNNCTG	1 cut(s)	515
AoxI	GGCC	2 cut(s)	74, 612
ApeKI	GCWGC	8 cut(s)	38, 41, 96, 99, 151, 160, 320, 470
ApoI	RAATTY	1 cut(s)	20
AspLEI	GCGC	1 cut(s)	470
AspS9I	GGNCC	2 cut(s)	74, 170
AsuHPI	GGTGA	4 cut(s)	205, 280, 298, 596
AvaII	GGWCC	1 cut(s)	170
BalI	TGGCCA	1 cut(s)	614
BbvI	GCAGC	8 cut(s)	28, 50, 108, 111, 138, 147, 332, 482
BccI	CCATC	3 cut(s)	64, 83, 629
BceAI	ACGGC	1 cut(s)	295
BciT130I	CCWGG	1 cut(s)	355
BciVI	GTATCC	1 cut(s)	287
BcoDI	GTCTC	2 cut(s)	75, 137
BfaI	CTAG	1 cut(s)	371
BfmI	CTRYAG	1 cut(s)	42
BfuI	GTATCC	1 cut(s)	287
BisI	GCNGC	9 cut(s)	39, 42, 97, 100, 152, 161, 183, 321, 471
BlsI	GCNGC	9 cut(s)	40, 43, 98, 101, 153, 162, 184, 322, 472
Bme1390I	CCNGG	1 cut(s)	355
Bme18I	GGWCC	1 cut(s)	170
BmgBI	CACGTC	1 cut(s)	457
BmgT120I	GGNCC	2 cut(s)	74, 170
BmiI	GGNNCC	1 cut(s)	75
BmrFI	CCNGG	1 cut(s)	355
BmsI	GCATC	2 cut(s)	186, 586
BpmI	CTGGAG	1 cut(s)	426
BsaJI	CCNNGG	1 cut(s)	354
BsaXI	ACNNNNNCTCC	2 cut(s)	413, 443
Bsc4I	CCNNNNNNNGG	4 cut(s)	354, 355, 397, 626
Bse3DI	GCAATG	1 cut(s)	315
BseBI	CCWGG	1 cut(s)	355
BseDI	CCNNGG	1 cut(s)	354
BseGI	GGATG	1 cut(s)	75
BseLI	CCNNNNNNNGG	4 cut(s)	354, 355, 397, 626
BseMI	GCAATG	1 cut(s)	315
BseMII	CTCAG	1 cut(s)	132
BseRI	GAGGAG	1 cut(s)	591
BseXI	GCAGC	8 cut(s)	28, 50, 108, 111, 138, 147, 332, 482
Bsh1285I	CGRYCG	1 cut(s)	639
BshFI	GGCC	2 cut(s)	76, 614
BsiEI	CGRYCG	1 cut(s)	639
BsiSI	CCGG	1 cut(s)	291
BslFI	GGGAC	1 cut(s)	331
BslI	CCNNNNNNNGG	4 cut(s)	354, 355, 397, 626
BsmAI	GTCTC	2 cut(s)	75, 137
BsmBI	CGTCTC	1 cut(s)	75
BsmFI	GGGAC	1 cut(s)	331
BsmI	GAATGC	2 cut(s)	277, 630
BsnI	GGCC	2 cut(s)	76, 614
Bsp143I	GATC	1 cut(s)	373
BspACI	CCGC	4 cut(s)	133, 182, 309, 639
BspANI	GGCC	2 cut(s)	76, 614
BspCNI	CTCAG	1 cut(s)	133
BspHI	TCATGA	1 cut(s)	202
BspLI	GGNNCC	1 cut(s)	75
BspMAI	CTGCAG	1 cut(s)	46
BspQI	GCTCTTC	1 cut(s)	587
BsrDI	GCAATG	1 cut(s)	315
BssECI	CCNNGG	1 cut(s)	354
BssMI	GATC	1 cut(s)	373
Bst2UI	CCWGG	1 cut(s)	355
Bst4CI	ACNGT	1 cut(s)	128
Bst6I	CTCTTC	1 cut(s)	587
BstC8I	GCNNGC	2 cut(s)	46, 544
BstDEI	CTNAG	1 cut(s)	141
BstF5I	GGATG	1 cut(s)	75
BstHHI	GCGC	1 cut(s)	470
BstKTI	GATC	1 cut(s)	376
BstMAI	GTCTC	2 cut(s)	75, 137
BstMBI	GATC	1 cut(s)	373
BstMCI	CGRYCG	1 cut(s)	639
BstMWI	GCNNNNNNNGC	6 cut(s)	105, 157, 160, 317, 518, 548
BstNI	CCWGG	1 cut(s)	355
BstSCI	CCNGG	1 cut(s)	353
BstSFI	CTRYAG	1 cut(s)	42
BstV1I	GCAGC	8 cut(s)	28, 50, 108, 111, 138, 147, 332, 482
BsuI	GTATCC	1 cut(s)	287
BsuRI	GGCC	2 cut(s)	76, 614
BtrI	CACGTC	1 cut(s)	457
BtsCI	GGATG	1 cut(s)	75
BtsIMutI	CAGTG	1 cut(s)	216
Cac8I	GCNNGC	2 cut(s)	46, 544
CaiI	CAGNNNCTG	1 cut(s)	515
CciI	TCATGA	1 cut(s)	202
CfoI	GCGC	1 cut(s)	470
Cfr13I	GGNCC	2 cut(s)	74, 170
CseI	GACGC	1 cut(s)	143
Csp6I	GTAC	3 cut(s)	262, 388, 430
CspCI	CAANNNNNGTGG	2 cut(s)	205, 240
CviAII	CATG	5 cut(s)	203, 343, 377, 462, 650
CviQI	GTAC	3 cut(s)	262, 388, 430
DdeI	CTNAG	1 cut(s)	141
DpnI	GATC	1 cut(s)	375
DpnII	GATC	1 cut(s)	373
DraIII	CACNNNGTG	1 cut(s)	610
EaeI	YGGCCR	1 cut(s)	612
Eam1104I	CTCTTC	1 cut(s)	587
EarI	CTCTTC	1 cut(s)	587
Eco47I	GGWCC	1 cut(s)	170
Eco57I	CTGAAG	2 cut(s)	54, 568
EcoRII	CCWGG	1 cut(s)	353
Esp3I	CGTCTC	1 cut(s)	75
FaeI	CATG	5 cut(s)	206, 346, 380, 465, 653
FaiI	YATR	9 cut(s)	65, 204, 344, 378, 439, 463, 549, 594, 651
FaqI	GGGAC	1 cut(s)	331
FatI	CATG	5 cut(s)	202, 342, 376, 461, 649
Fnu4HI	GCNGC	9 cut(s)	39, 42, 97, 100, 152, 161, 183, 321, 471
FokI	GGATG	1 cut(s)	82
Fsp4HI	GCNGC	9 cut(s)	39, 42, 97, 100, 152, 161, 183, 321, 471
FspBI	CTAG	1 cut(s)	371
GlaI	GCGC	1 cut(s)	469
GluI	GCNGC	9 cut(s)	39, 42, 97, 100, 152, 161, 183, 321, 471
GsuI	CTGGAG	1 cut(s)	426
HaeIII	GGCC	2 cut(s)	76, 614
HapII	CCGG	1 cut(s)	291
HgaI	GACGC	1 cut(s)	143
HhaI	GCGC	1 cut(s)	470
Hin1II	CATG	5 cut(s)	206, 346, 380, 465, 653
Hin6I	GCGC	1 cut(s)	468
HinP1I	GCGC	1 cut(s)	468
HinfI	GANTC	2 cut(s)	206, 492
HpaII	CCGG	1 cut(s)	291
HphI	GGTGA	4 cut(s)	205, 280, 298, 596
Hpy188I	TCNGA	4 cut(s)	34, 251, 454, 636
Hpy188III	TCNNGA	1 cut(s)	203
HpyAV	CCTTC	2 cut(s)	311, 655
HpyCH4III	ACNGT	1 cut(s)	128
HpyCH4IV	ACGT	2 cut(s)	386, 456
HpyCH4V	TGCA	3 cut(s)	44, 320, 551
HpyF10VI	GCNNNNNNNGC	6 cut(s)	105, 157, 160, 317, 518, 548
HpyF3I	CTNAG	1 cut(s)	141
HpySE526I	ACGT	2 cut(s)	386, 456
Hsp92II	CATG	5 cut(s)	206, 346, 380, 465, 653
HspAI	GCGC	1 cut(s)	468
Kzo9I	GATC	1 cut(s)	373
LguI	GCTCTTC	1 cut(s)	587
LmnI	GCTCC	4 cut(s)	251, 407, 465, 604
LpnPI	CCDG	9 cut(s)	30, 224, 244, 304, 340, 367, 383, 390, 621
Lsp1109I	GCAGC	8 cut(s)	28, 50, 108, 111, 138, 147, 332, 482
LweI	GCATC	2 cut(s)	186, 586
MaeI	CTAG	1 cut(s)	371
MaeII	ACGT	2 cut(s)	386, 456
MaeIII	GTNAC	3 cut(s)	122, 457, 497
MalI	GATC	1 cut(s)	375
MboI	GATC	1 cut(s)	373
MboII	GAAGA	4 cut(s)	98, 355, 358, 574
MfeI	CAATTG	1 cut(s)	165
MlsI	TGGCCA	1 cut(s)	614
MluCI	AATT	4 cut(s)	20, 165, 393, 448
MluNI	TGGCCA	1 cut(s)	614
MlyI	GAGTC	1 cut(s)	200
MnlI	CCTC	5 cut(s)	52, 339, 415, 580, 612
Mox20I	TGGCCA	1 cut(s)	614
MscI	TGGCCA	1 cut(s)	614
MslI	CAYNNNNRTG	1 cut(s)	68
Msp20I	TGGCCA	1 cut(s)	614
MspA1I	CMGCKG	2 cut(s)	41, 140
MspI	CCGG	1 cut(s)	291
MspR9I	CCNGG	1 cut(s)	355
MunI	CAATTG	1 cut(s)	165
Mva1269I	GAATGC	2 cut(s)	277, 630
MvaI	CCWGG	1 cut(s)	355
MwoI	GCNNNNNNNGC	6 cut(s)	105, 157, 160, 317, 518, 548
NdeII	GATC	1 cut(s)	373
NlaIII	CATG	5 cut(s)	206, 346, 380, 465, 653
NlaIV	GGNNCC	1 cut(s)	75
NmeAIII	GCCGAG	1 cut(s)	102
NmuCI	GTSAC	2 cut(s)	457, 497
PagI	TCATGA	1 cut(s)	202
PciSI	GCTCTTC	1 cut(s)	587
PctI	GAATGC	2 cut(s)	277, 630
PfeI	GAWTC	1 cut(s)	492
PkrI	GCNGC	9 cut(s)	40, 43, 98, 101, 153, 162, 184, 322, 472
PleI	GAGTC	1 cut(s)	200
PpsI	GAGTC	1 cut(s)	200
Psp6I	CCWGG	1 cut(s)	353
PspGI	CCWGG	1 cut(s)	353
PspN4I	GGNNCC	1 cut(s)	75
PspPI	GGNCC	2 cut(s)	74, 170
PstI	CTGCAG	1 cut(s)	46
PstNI	CAGNNNCTG	1 cut(s)	515
PvuII	CAGCTG	2 cut(s)	41, 140
RsaI	GTAC	3 cut(s)	263, 389, 431
RsaNI	GTAC	3 cut(s)	262, 388, 430
RseI	CAYNNNNRTG	1 cut(s)	68
SapI	GCTCTTC	1 cut(s)	587
SatI	GCNGC	9 cut(s)	39, 42, 97, 100, 152, 161, 183, 321, 471
Sau3AI	GATC	1 cut(s)	373
Sau96I	GGNCC	2 cut(s)	74, 170
SchI	GAGTC	1 cut(s)	200
ScrFI	CCNGG	1 cut(s)	355
SfaNI	GCATC	2 cut(s)	186, 586
SfcI	CTRYAG	1 cut(s)	42
SinI	GGWCC	1 cut(s)	170
SmiMI	CAYNNNNRTG	1 cut(s)	68
Sse9I	AATT	4 cut(s)	20, 165, 393, 448
SsiI	CCGC	4 cut(s)	133, 182, 309, 639
SspMI	CTAG	1 cut(s)	371
StyD4I	CCNGG	1 cut(s)	353
TaaI	ACNGT	1 cut(s)	128
TaiI	ACGT	2 cut(s)	389, 459
TasI	AATT	4 cut(s)	20, 165, 393, 448
TatI	WGTACW	1 cut(s)	429
TauI	GCSGC	1 cut(s)	185
TfiI	GAWTC	1 cut(s)	492
TscAI	CASTG	1 cut(s)	223
TseFI	GTSAC	2 cut(s)	457, 497
TseI	GCWGC	8 cut(s)	38, 41, 96, 99, 151, 160, 320, 470
Tsp45I	GTSAC	2 cut(s)	457, 497
TspDTI	ATGAA	1 cut(s)	191
TspRI	CASTG	1 cut(s)	223
VpaK11BI	GGWCC	1 cut(s)	170
XapI	RAATTY	1 cut(s)	20
XcmI	CCANNNNNNNNNTGG	1 cut(s)	529
XspI	CTAG	1 cut(s)	371

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.