Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0010694

Physical Location & Seq

Genomic Coordinates Reverse (-)

5069294 .. 5074543

Gene Structure 5250 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G048000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1155 bp

ATGAACACCCAAGAGCTGGAACTGCAATCCAGAGTTGAGAACCCGAGACCAGATTCAGCTAGAGAAACCAACCTACATTCTTCTCCCAACGGGCAGAAGCTTCCCAATTACAGGTGGTGGCTTCGGGTGATCATCTACATCCTCTTTCTTCTCACAGGCCAATCTGCAGCCACCCTCTTGGGAAGACTATACTATGACAAAGGCGGCAATAGCAAATGGATGGCAACGTTTGTTCAATCAGCAGGCTTCCCAATTCTTCTTCCTCTCCTATATTTTTTCCCATCATCAACCAAGTTGACCACAAACCCTGTTCACAGCACTACTTCCTCTGCAGCCAAAATACCAAAGCTCTCTACCCTTACCTTGCTCTACCTCGCGTTCGGTCTACTCTTGACCGGAGACAACATGATGTATTCGTATGGCCTTCTGTATCTCCCAGTCTCCACTTACTCTTTACTATGTGCAACTCAATTGGCCTTCAATGCATTTTTCTCCTTCTTTCTTAATTCCCAAAAGTTCACTCCTTTTATACTCAACTCTTTAGTTCTTGTTACCATGTCTGCATCGCTTCTCGCAATCAATGCAGACTCCGAAAACAATACCAATAATATCCCCAAAGGAAAGTATGTGACTGGTTTCCTATGCACACTTGGTGCCTCTGCTACTTACTCATTGTACCTTTCCCTGGTACAACTTTCGTTCCAGAAGGTTATAAAATCGGAGACATTTTCGACTGTTTTGAACATGCAAATATACCCATCATTTTTTGCAACATGTGGTTGTGTAGTTGGACTTTTTGCAAGTGGGGAATGGAAAGGTTTGGAAAGTGAGATGAAGGAATACAAGCAAGGAAGGGTCTCTTATATAATGACTCTGCTTTGGACTGCTGTGACATGGCAAATTTCCTCTGTGGGTTTGTTGGGGTTGATTTTTGAAGTGTCTTCTCTGTTCTCCAATGTCATCAGTACCTTGGCTCTGCCTCTTGTTCCCATTCTTGCTGTAATATTTTTCCACGATAAGATGGACGGGGTGAAGGTGATGGCGATGTTGTTGGCAATCTGGGGCTTTCTTTCCTATATCTATCAGAATTATCGAGATGTCTCAGAATCGAAGGCAAAAGAAATAATGACAATTAAATTTCAGGGACTGCCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PUNUT

Protein Analysis

385

Amino Acids

42.87

Weight (kDa)

9.06

Isoelectric Point (pI)

32.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010694)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G44750 AT1G44750 AT1G44750 AT1G44750 AT1G44750 AT4G08700 AT5G41160
malus_domestica	MD00G1084900.v1.1
prunus_persica	Prupe.5G048000_v2.0.a1 Prupe.5G048000_v2.0.a1 Prupe.5G048000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0208071 RchiOBHm_Chr7g0208081
rosa_laevigata	RLG00000003256
rosa_rugosa	Rorug04G0100900 Rorug04G0101000 Rorug04G0101500 Rorug07G0101200
rosa_samantha	Rh7BG230800 Rh7CG250500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	713
AccB1I	GGYRCC	1 cut(s)	653
AccB7I	CCANNNNNTGG	1 cut(s)	16
AccI	GTMKAC	1 cut(s)	385
AccII	CGCG	1 cut(s)	377
AciI	CCGC	1 cut(s)	204
AclI	AACGTT	1 cut(s)	227
AcsI	RAATTY	2 cut(s)	900, 1136
AdeI	CACNNNGTG	1 cut(s)	653
AfaI	GTAC	3 cut(s)	677, 690, 967
AfiI	CCNNNNNNNGG	3 cut(s)	16, 111, 685
AflIII	ACRYGT	1 cut(s)	773
AgsI	TTSAA	4 cut(s)	236, 481, 742, 935
AjnI	CCWGG	1 cut(s)	684
AluBI	AGCT	4 cut(s)	16, 59, 100, 349
AluI	AGCT	4 cut(s)	16, 59, 100, 349
Alw26I	GTCTC	6 cut(s)	40, 393, 445, 716, 862, 1105
AlwNI	CAGNNNCTG	1 cut(s)	1147
Ama87I	CYCGRG	1 cut(s)	43
AoxI	GGCC	3 cut(s)	157, 421, 474
ApeKI	GCWGC	2 cut(s)	167, 332
ApoI	RAATTY	2 cut(s)	900, 1136
AsuHPI	GGTGA	3 cut(s)	139, 1042, 1048
AvaI	CYCGRG	1 cut(s)	43
BanI	GGYRCC	1 cut(s)	653
BbsI	GAAGAC	2 cut(s)	190, 933
BbvI	GCAGC	2 cut(s)	179, 344
BccI	CCATC	5 cut(s)	214, 289, 766, 1015, 1033
BciT130I	CCWGG	1 cut(s)	686
BclI	TGATCA	1 cut(s)	129
BcoDI	GTCTC	6 cut(s)	40, 393, 445, 716, 862, 1105
BfaI	CTAG	2 cut(s)	60, 1153
BfmI	CTRYAG	2 cut(s)	165, 330
BisI	GCNGC	3 cut(s)	168, 205, 333
BlsI	GCNGC	3 cut(s)	169, 206, 334
Bme1390I	CCNGG	1 cut(s)	686
BmeT110I	CYCGRG	1 cut(s)	43
BmiI	GGNNCC	1 cut(s)	655
BmrFI	CCNGG	1 cut(s)	686
BmrI	ACTGGG	1 cut(s)	431
BmsI	GCATC	1 cut(s)	572
BmuI	ACTGGG	1 cut(s)	431
BpiI	GAAGAC	2 cut(s)	190, 933
BsaI	GGTCTC	2 cut(s)	40, 862
BsaJI	CCNNGG	2 cut(s)	684, 969
BsaWI	WCCGGW	1 cut(s)	395
Bsc4I	CCNNNNNNNGG	3 cut(s)	16, 111, 685
Bse1I	ACTGG	2 cut(s)	437, 637
BseBI	CCWGG	1 cut(s)	686
BseDI	CCNNGG	2 cut(s)	684, 969
BseGI	GGATG	2 cut(s)	138, 225
BseLI	CCNNNNNNNGG	3 cut(s)	16, 111, 685
BseMII	CTCAG	1 cut(s)	1116
BseNI	ACTGG	2 cut(s)	437, 637
BseXI	GCAGC	2 cut(s)	179, 344
Bsh1236I	CGCG	1 cut(s)	377
BshFI	GGCC	3 cut(s)	159, 423, 476
BshNI	GGYRCC	1 cut(s)	653
BsiHKCI	CYCGRG	1 cut(s)	43
BsiSI	CCGG	1 cut(s)	396
BslI	CCNNNNNNNGG	3 cut(s)	16, 111, 685
BsmAI	GTCTC	6 cut(s)	40, 393, 445, 716, 862, 1105
BsnI	GGCC	3 cut(s)	159, 423, 476
Bso31I	GGTCTC	2 cut(s)	40, 862
BsoBI	CYCGRG	1 cut(s)	43
Bsp143I	GATC	1 cut(s)	129
BspACI	CCGC	1 cut(s)	204
BspANI	GGCC	3 cut(s)	159, 423, 476
BspCNI	CTCAG	1 cut(s)	1115
BspFNI	CGCG	1 cut(s)	377
BspLI	GGNNCC	1 cut(s)	655
BspMAI	CTGCAG	2 cut(s)	169, 334
BspT107I	GGYRCC	1 cut(s)	653
BspTNI	GGTCTC	2 cut(s)	40, 862
BsrI	ACTGG	2 cut(s)	437, 637
BssECI	CCNNGG	2 cut(s)	684, 969
BssMI	GATC	1 cut(s)	129
BssT1I	CCWWGG	1 cut(s)	969
Bst2UI	CCWGG	1 cut(s)	686
Bst4CI	ACNGT	1 cut(s)	736
BstAPI	GCANNNNNTGC	1 cut(s)	581
BstC8I	GCNNGC	1 cut(s)	244
BstDEI	CTNAG	1 cut(s)	1102
BstF5I	GGATG	2 cut(s)	138, 225
BstFNI	CGCG	1 cut(s)	377
BstKTI	GATC	1 cut(s)	132
BstMAI	GTCTC	6 cut(s)	40, 393, 445, 716, 862, 1105
BstMBI	GATC	1 cut(s)	129
BstMWI	GCNNNNNNNGC	4 cut(s)	22, 210, 482, 581
BstNI	CCWGG	1 cut(s)	686
BstNSI	RCATGY	2 cut(s)	748, 777
BstSCI	CCNGG	1 cut(s)	684
BstSFI	CTRYAG	2 cut(s)	165, 330
BstUI	CGCG	1 cut(s)	377
BstV1I	GCAGC	2 cut(s)	179, 344
BstV2I	GAAGAC	2 cut(s)	190, 933
BstXI	CCANNNNNNTGG	1 cut(s)	178
BsuRI	GGCC	3 cut(s)	159, 423, 476
BtgZI	GCGATG	2 cut(s)	549, 1058
BtsCI	GGATG	2 cut(s)	138, 225
Cac8I	GCNNGC	1 cut(s)	244
CaiI	CAGNNNCTG	1 cut(s)	1147
Csp6I	GTAC	3 cut(s)	676, 689, 966
CviAII	CATG	5 cut(s)	406, 556, 745, 774, 894
CviQI	GTAC	3 cut(s)	676, 689, 966
DdeI	CTNAG	1 cut(s)	1102
DpnI	GATC	1 cut(s)	131
DpnII	GATC	1 cut(s)	129
DraIII	CACNNNGTG	1 cut(s)	653
Eco130I	CCWWGG	1 cut(s)	969
Eco31I	GGTCTC	2 cut(s)	40, 862
Eco88I	CYCGRG	1 cut(s)	43
EcoRII	CCWGG	1 cut(s)	684
EcoT14I	CCWWGG	1 cut(s)	969
EcoT22I	ATGCAT	1 cut(s)	487
ErhI	CCWWGG	1 cut(s)	969
FaeI	CATG	5 cut(s)	409, 559, 748, 777, 897
FalI	AAGNNNNNCTT	2 cut(s)	844, 876
FatI	CATG	5 cut(s)	405, 555, 744, 773, 893
FbaI	TGATCA	1 cut(s)	129
FblI	GTMKAC	1 cut(s)	385
Fnu4HI	GCNGC	3 cut(s)	168, 205, 333
FokI	GGATG	2 cut(s)	125, 232
Fsp4HI	GCNGC	3 cut(s)	168, 205, 333
FspBI	CTAG	2 cut(s)	60, 1153
GluI	GCNGC	3 cut(s)	168, 205, 333
HaeIII	GGCC	3 cut(s)	159, 423, 476
HapII	CCGG	1 cut(s)	396
Hin1II	CATG	5 cut(s)	409, 559, 748, 777, 897
HincII	GTYRAC	1 cut(s)	297
HindII	GTYRAC	1 cut(s)	297
HindIII	AAGCTT	1 cut(s)	98
HinfI	GANTC	4 cut(s)	53, 587, 871, 1106
HpaII	CCGG	1 cut(s)	396
HphI	GGTGA	3 cut(s)	139, 1042, 1048
Hpy166II	GTNNAC	4 cut(s)	297, 313, 386, 519
Hpy188I	TCNGA	4 cut(s)	592, 721, 1086, 1105
Hpy188III	TCNNGA	4 cut(s)	30, 391, 703, 1094
Hpy8I	GTNNAC	4 cut(s)	297, 313, 386, 519
HpyAV	CCTTC	8 cut(s)	434, 487, 505, 700, 829, 846, 1027, 1105
HpyCH4III	ACNGT	1 cut(s)	736
HpyCH4IV	ACGT	1 cut(s)	227
HpyF10VI	GCNNNNNNNGC	4 cut(s)	22, 210, 482, 581
HpyF3I	CTNAG	1 cut(s)	1102
HpySE526I	ACGT	1 cut(s)	227
Hsp92II	CATG	5 cut(s)	409, 559, 748, 777, 897
Ksp22I	TGATCA	1 cut(s)	129
Kzo9I	GATC	1 cut(s)	129
Lsp1109I	GCAGC	2 cut(s)	179, 344
LweI	GCATC	1 cut(s)	572
MaeI	CTAG	2 cut(s)	60, 1153
MaeII	ACGT	1 cut(s)	227
MaeIII	GTNAC	3 cut(s)	550, 628, 889
MalI	GATC	1 cut(s)	131
MboI	GATC	1 cut(s)	129
MboII	GAAGA	6 cut(s)	72, 140, 195, 248, 251, 933
MfeI	CAATTG	1 cut(s)	470
MluCI	AATT	8 cut(s)	106, 252, 470, 505, 900, 1087, 1131, 1136
MlyI	GAGTC	2 cut(s)	581, 865
MmeI	TCCRAC	1 cut(s)	769
MnlI	CCTC	8 cut(s)	152, 185, 273, 337, 383, 667, 916, 990
Mph1103I	ATGCAT	1 cut(s)	487
MseI	TTAA	2 cut(s)	504, 1134
MspI	CCGG	1 cut(s)	396
MspR9I	CCNGG	1 cut(s)	686
MunI	CAATTG	1 cut(s)	470
MvaI	CCWGG	1 cut(s)	686
MvnI	CGCG	1 cut(s)	377
MwoI	GCNNNNNNNGC	4 cut(s)	22, 210, 482, 581
NdeII	GATC	1 cut(s)	129
NlaIII	CATG	5 cut(s)	409, 559, 748, 777, 897
NlaIV	GGNNCC	1 cut(s)	655
NmuCI	GTSAC	2 cut(s)	628, 889
NsiI	ATGCAT	1 cut(s)	487
NspI	RCATGY	2 cut(s)	748, 777
PciI	ACATGT	1 cut(s)	773
PfeI	GAWTC	2 cut(s)	53, 1106
PflMI	CCANNNNNTGG	1 cut(s)	16
PkrI	GCNGC	3 cut(s)	169, 206, 334
PleI	GAGTC	2 cut(s)	581, 865
PpsI	GAGTC	2 cut(s)	581, 865
PscI	ACATGT	1 cut(s)	773
PsiI	TTATAA	1 cut(s)	713
Psp1406I	AACGTT	1 cut(s)	227
Psp6I	CCWGG	1 cut(s)	684
PspGI	CCWGG	1 cut(s)	684
PspN4I	GGNNCC	1 cut(s)	655
PstI	CTGCAG	2 cut(s)	169, 334
PstNI	CAGNNNCTG	1 cut(s)	1147
RsaI	GTAC	3 cut(s)	677, 690, 967
RsaNI	GTAC	3 cut(s)	676, 689, 966
SaqAI	TTAA	2 cut(s)	504, 1134
SatI	GCNGC	3 cut(s)	168, 205, 333
Sau3AI	GATC	1 cut(s)	129
SchI	GAGTC	2 cut(s)	581, 865
ScrFI	CCNGG	1 cut(s)	686
SfaNI	GCATC	1 cut(s)	572
SfcI	CTRYAG	2 cut(s)	165, 330
Sse9I	AATT	8 cut(s)	106, 252, 470, 505, 900, 1087, 1131, 1136
SsiI	CCGC	1 cut(s)	204
SspI	AATATT	1 cut(s)	1005
SspMI	CTAG	2 cut(s)	60, 1153
StyD4I	CCNGG	1 cut(s)	684
StyI	CCWWGG	1 cut(s)	969
TaaI	ACNGT	1 cut(s)	736
TaiI	ACGT	1 cut(s)	230
TaqI	TCGA	3 cut(s)	731, 1093, 1109
TaqII	GACCGA	1 cut(s)	371
TasI	AATT	8 cut(s)	106, 252, 470, 505, 900, 1087, 1131, 1136
TauI	GCSGC	1 cut(s)	207
TfiI	GAWTC	2 cut(s)	53, 1106
Tru1I	TTAA	2 cut(s)	504, 1134
Tru9I	TTAA	2 cut(s)	504, 1134
TseFI	GTSAC	2 cut(s)	628, 889
TseI	GCWGC	2 cut(s)	167, 332
Tsp45I	GTSAC	2 cut(s)	628, 889
TspDTI	ATGAA	2 cut(s)	17, 848
Van91I	CCANNNNNTGG	1 cut(s)	16
XapI	RAATTY	2 cut(s)	900, 1136
XceI	RCATGY	2 cut(s)	748, 777
XmiI	GTMKAC	1 cut(s)	385
XspI	CTAG	2 cut(s)	60, 1153
Zsp2I	ATGCAT	1 cut(s)	487

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.