Rh7BG230800

Purine nucleobase transmembrane transport

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0010694
Physical Location & Seq
Forward (+)
20197858 .. 20198208
351 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG230800.1

Sequence Viewer

Length: 351 bp
ATGTCTGCCTCCGTTCTCGCCATCAATTCTGACTCCGAAAACACTACCAATCACATCTCTAAAGGTAAGTATGTGATTGGTTTCTTGTGTACCTTCGGCGCCTCCACGACTTACTCATTGTACCTTTCCCTTGTGCAACTTTCATTCCAGAAGGTGATAAAAGGAGAGACATTTTCTACTATCTTGGATATGCAAATAATGCAATTATACCCATCGTTTGTTGCGACATGTGGTTGTATGGTAGGGCTTTTTGCAAGTGGGGAATGGAAAGGTTTGGAAAGTGAGATGAAGGAATACAAAGAAGGAAGAGTCTTTTATATAATAACCCTGCTCTGGACTGCTGTGTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PUNUT

Protein Analysis

116

Amino Acids

12.87

Weight (kDa)

5.72

Isoelectric Point (pI)

28.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PUNUT PF16913 2 - 116 8.7e-36 Purine nucleobase transmembrane transport
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 343
AccB1I GGYRCC 1 cut(s) 98
AcyI GRCGYC 1 cut(s) 99
AfaI GTAC 2 cut(s) 91, 122
AfiI CCNNNNNNNGG 1 cut(s) 333
AflIII ACRYGT 1 cut(s) 227
Alw26I GTCTC 1 cut(s) 161
AspLEI GCGC 1 cut(s) 101
AsuHPI GGTGA 1 cut(s) 166
BanI GGYRCC 1 cut(s) 98
BccI CCATC 2 cut(s) 29, 220
BcoDI GTCTC 1 cut(s) 161
BfoI RGCGCY 1 cut(s) 102
BmiI GGNNCC 1 cut(s) 100
BsaHI GRCGYC 1 cut(s) 99
Bsc4I CCNNNNNNNGG 1 cut(s) 333
BseLI CCNNNNNNNGG 1 cut(s) 333
BshNI GGYRCC 1 cut(s) 98
BslI CCNNNNNNNGG 1 cut(s) 333
BsmAI GTCTC 1 cut(s) 161
BspLI GGNNCC 1 cut(s) 100
BspT107I GGYRCC 1 cut(s) 98
BssNI GRCGYC 1 cut(s) 99
Bst6I CTCTTC 1 cut(s) 301
BstACI GRCGYC 1 cut(s) 99
BstAPI GCANNNNNTGC 1 cut(s) 199
BstH2I RGCGCY 1 cut(s) 102
BstHHI GCGC 1 cut(s) 101
BstMAI GTCTC 1 cut(s) 161
BstMWI GCNNNNNNNGC 1 cut(s) 199
BstNSI RCATGY 1 cut(s) 231
CfoI GCGC 1 cut(s) 101
Csp6I GTAC 2 cut(s) 90, 121
CviAII CATG 1 cut(s) 228
CviJI RGCY 1 cut(s) 247
CviKI_1 RGCY 1 cut(s) 247
CviQI GTAC 2 cut(s) 90, 121
DinI GGCGCC 1 cut(s) 100
DrdI GACNNNNNNGTC 1 cut(s) 343
DseDI GACNNNNNNGTC 1 cut(s) 343
Eam1104I CTCTTC 1 cut(s) 301
EarI CTCTTC 1 cut(s) 301
EgeI GGCGCC 1 cut(s) 100
EheI GGCGCC 1 cut(s) 100
FaeI CATG 1 cut(s) 231
FaiI YATR 8 cut(s) 72, 191, 208, 229, 239, 318, 320, 349
FatI CATG 1 cut(s) 227
GlaI GCGC 1 cut(s) 100
HaeII RGCGCY 1 cut(s) 102
HhaI GCGC 1 cut(s) 101
Hin1I GRCGYC 1 cut(s) 99
Hin1II CATG 1 cut(s) 231
Hin6I GCGC 1 cut(s) 99
HinP1I GCGC 1 cut(s) 99
HinfI GANTC 2 cut(s) 32, 309
HphI GGTGA 1 cut(s) 166
Hpy166II GTNNAC 1 cut(s) 90
Hpy188I TCNGA 2 cut(s) 31, 37
Hpy188III TCNNGA 2 cut(s) 148, 334
Hpy8I GTNNAC 1 cut(s) 90
HpyAV CCTTC 4 cut(s) 103, 145, 283, 296
HpyCH4V TGCA 4 cut(s) 136, 193, 202, 254
HpyF10VI GCNNNNNNNGC 1 cut(s) 199
Hsp92I GRCGYC 1 cut(s) 99
Hsp92II CATG 1 cut(s) 231
HspAI GCGC 1 cut(s) 99
KasI GGCGCC 1 cut(s) 98
LpnPI CCDG 3 cut(s) 161, 319, 341
MboII GAAGA 1 cut(s) 318
MluCI AATT 2 cut(s) 25, 203
Mly113I GGCGCC 1 cut(s) 99
MlyI GAGTC 2 cut(s) 26, 318
MnlI CCTC 2 cut(s) 19, 112
MwoI GCNNNNNNNGC 1 cut(s) 199
NarI GGCGCC 1 cut(s) 99
NlaIII CATG 1 cut(s) 231
NlaIV GGNNCC 1 cut(s) 100
NspI RCATGY 1 cut(s) 231
PciI ACATGT 1 cut(s) 227
PcsI WCGNNNNNNNCGW 1 cut(s) 221
PleI GAGTC 2 cut(s) 26, 317
PluTI GGCGCC 1 cut(s) 102
PpsI GAGTC 2 cut(s) 26, 317
PscI ACATGT 1 cut(s) 227
PspN4I GGNNCC 1 cut(s) 100
RsaI GTAC 2 cut(s) 91, 122
RsaNI GTAC 2 cut(s) 90, 121
SchI GAGTC 2 cut(s) 26, 318
SetI ASST 5 cut(s) 67, 95, 126, 156, 274
SfoI GGCGCC 1 cut(s) 100
Sse9I AATT 2 cut(s) 25, 203
SspDI GGCGCC 1 cut(s) 98
TasI AATT 2 cut(s) 25, 203
TspDTI ATGAA 2 cut(s) 132, 302
XceI RCATGY 1 cut(s) 231
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.