Cotton fibre expressed protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G16790 |
| fragaria_vesca | FvH4_5g19610 |
| malus_domestica | MD04G1061300.v1.1 MD06G1054900.v1.1 |
| prunus_persica | Prupe.5G064100_v2.0.a1 Prupe.5G064100_v2.0.a1 |
| pyrus_communis | pycom06g04590 pycom06g04610 |
| rosa_chinensis | RchiOBHm_Chr7g0204301 |
| rosa_laevigata | RLG00000003474 |
| rosa_multiflora | Rmu_sc0002918.1_g000012 Rmu_sc0015861.1_g000002 Rmu_sc0015861.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00253240 |
| rosa_rugosa | Rorug07G0081800 |
| rosa_samantha | Rh7AG212500 Rh7BG210500 Rh7CG224500 Rh7DG219300 |
| rosa_wichuraiana | Rw7G018420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1065 |
| Acc65I | GGTACC | 1 cut(s) | 488 |
| AccB1I | GGYRCC | 1 cut(s) | 488 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 58, 207 |
| AciI | CCGC | 5 cut(s) | 492, 832, 1037, 1043, 1052 |
| AclWI | GGATC | 2 cut(s) | 702, 1573 |
| AcsI | RAATTY | 8 cut(s) | 305, 375, 680, 818, 883, 1366, 1621, 1697 |
| AcuI | CTGAAG | 4 cut(s) | 326, 336, 1114, 1703 |
| AfaI | GTAC | 2 cut(s) | 195, 490 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 58, 207, 560, 1701 |
| AflIII | ACRYGT | 1 cut(s) | 547 |
| AgeI | ACCGGT | 1 cut(s) | 439 |
| AgsI | TTSAA | 9 cut(s) | 12, 184, 498, 721, 1153, 1202, 1351, 1361, 1477 |
| AhlI | ACTAGT | 1 cut(s) | 124 |
| AjnI | CCWGG | 1 cut(s) | 410 |
| Alw21I | GWGCWC | 3 cut(s) | 216, 828, 1753 |
| Alw26I | GTCTC | 8 cut(s) | 20, 250, 362, 391, 915, 936, 978, 1592 |
| AlwI | GGATC | 2 cut(s) | 702, 1573 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 207 |
| Ama87I | CYCGRG | 1 cut(s) | 634 |
| AoxI | GGCC | 1 cut(s) | 1658 |
| ApeKI | GCWGC | 1 cut(s) | 1382 |
| ApoI | RAATTY | 8 cut(s) | 305, 375, 680, 818, 883, 1366, 1621, 1697 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 875, 907 |
| AsiGI | ACCGGT | 1 cut(s) | 439 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 643, 1346, 1506, 1729 |
| Asp718I | GGTACC | 1 cut(s) | 488 |
| AspS9I | GGNCC | 4 cut(s) | 61, 403, 855, 1658 |
| AsuHPI | GGTGA | 4 cut(s) | 190, 518, 689, 945 |
| AvaI | CYCGRG | 1 cut(s) | 634 |
| AvaII | GGWCC | 3 cut(s) | 61, 403, 855 |
| BanI | GGYRCC | 1 cut(s) | 488 |
| BanII | GRGCYC | 2 cut(s) | 216, 828 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1001, 1033 |
| BbsI | GAAGAC | 2 cut(s) | 342, 885 |
| Bbv12I | GWGCWC | 3 cut(s) | 216, 828, 1753 |
| BbvI | GCAGC | 1 cut(s) | 1369 |
| BccI | CCATC | 8 cut(s) | 388, 769, 928, 1088, 1171, 1220, 1300, 1646 |
| BceAI | ACGGC | 1 cut(s) | 1531 |
| BciT130I | CCWGG | 1 cut(s) | 412 |
| BcoDI | GTCTC | 8 cut(s) | 20, 250, 362, 391, 915, 936, 978, 1592 |
| BcuI | ACTAGT | 1 cut(s) | 124 |
| BfaI | CTAG | 5 cut(s) | 125, 333, 588, 671, 1638 |
| BisI | GCNGC | 1 cut(s) | 1383 |
| BlsI | GCNGC | 1 cut(s) | 1384 |
| Bme1390I | CCNGG | 1 cut(s) | 412 |
| Bme18I | GGWCC | 3 cut(s) | 61, 403, 855 |
| BmeT110I | CYCGRG | 1 cut(s) | 634 |
| BmgT120I | GGNCC | 4 cut(s) | 61, 403, 855, 1658 |
| BmiI | GGNNCC | 3 cut(s) | 63, 490, 857 |
| BmrFI | CCNGG | 1 cut(s) | 412 |
| BmsI | GCATC | 3 cut(s) | 953, 1219, 1458 |
| BpiI | GAAGAC | 2 cut(s) | 342, 885 |
| BpmI | CTGGAG | 1 cut(s) | 1287 |
| BpuEI | CTTGAG | 4 cut(s) | 441, 607, 960, 1138 |
| BsaBI | GATNNNNATC | 1 cut(s) | 763 |
| BsaI | GGTCTC | 1 cut(s) | 1592 |
| BsaJI | CCNNGG | 5 cut(s) | 752, 859, 902, 990, 1616 |
| BsaWI | WCCGGW | 1 cut(s) | 439 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 701, 731, 1158, 1188 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 58, 207, 560, 1701 |
| Bse118I | RCCGGY | 1 cut(s) | 439 |
| Bse1I | ACTGG | 2 cut(s) | 406, 594 |
| Bse3DI | GCAATG | 2 cut(s) | 515, 1168 |
| Bse8I | GATNNNNATC | 1 cut(s) | 763 |
| BseBI | CCWGG | 1 cut(s) | 412 |
| BseDI | CCNNGG | 5 cut(s) | 752, 859, 902, 990, 1616 |
| BseGI | GGATG | 5 cut(s) | 780, 784, 896, 1449, 1561 |
| BseJI | GATNNNNATC | 1 cut(s) | 763 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 58, 207, 560, 1701 |
| BseMI | GCAATG | 2 cut(s) | 515, 1168 |
| BseMII | CTCAG | 5 cut(s) | 165, 1206, 1419, 1482, 1766 |
| BseNI | ACTGG | 2 cut(s) | 406, 594 |
| BseRI | GAGGAG | 4 cut(s) | 725, 1135, 1505, 1508 |
| BseXI | GCAGC | 1 cut(s) | 1369 |
| BseYI | CCCAGC | 1 cut(s) | 207 |
| BsgI | GTGCAG | 1 cut(s) | 203 |
| BshFI | GGCC | 1 cut(s) | 1660 |
| BshNI | GGYRCC | 1 cut(s) | 488 |
| BshTI | ACCGGT | 1 cut(s) | 439 |
| BsiHKAI | GWGCWC | 3 cut(s) | 216, 828, 1753 |
| BsiHKCI | CYCGRG | 1 cut(s) | 634 |
| BsiSI | CCGG | 1 cut(s) | 440 |
| BslFI | GGGAC | 4 cut(s) | 47, 841, 1160, 1438 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 58, 207, 560, 1701 |
| BsmAI | GTCTC | 8 cut(s) | 20, 250, 362, 391, 915, 936, 978, 1592 |
| BsmBI | CGTCTC | 1 cut(s) | 936 |
| BsmFI | GGGAC | 4 cut(s) | 47, 841, 1160, 1438 |
| BsnI | GGCC | 1 cut(s) | 1660 |
| Bso31I | GGTCTC | 1 cut(s) | 1592 |
| BsoBI | CYCGRG | 1 cut(s) | 634 |
| Bsp1286I | GDGCHC | 3 cut(s) | 216, 828, 1753 |
| Bsp143I | GATC | 7 cut(s) | 694, 758, 764, 878, 1082, 1292, 1578 |
| Bsp19I | CCATGG | 1 cut(s) | 752 |
| BspACI | CCGC | 5 cut(s) | 492, 832, 1037, 1043, 1052 |
| BspANI | GGCC | 1 cut(s) | 1660 |
| BspCNI | CTCAG | 5 cut(s) | 166, 1205, 1420, 1481, 1765 |
| BspLI | GGNNCC | 3 cut(s) | 63, 490, 857 |
| BspPI | GGATC | 2 cut(s) | 702, 1573 |
| BspQI | GCTCTTC | 1 cut(s) | 1004 |
| BspT107I | GGYRCC | 1 cut(s) | 488 |
| BspTNI | GGTCTC | 1 cut(s) | 1592 |
| BsrDI | GCAATG | 2 cut(s) | 515, 1168 |
| BsrFI | RCCGGY | 1 cut(s) | 439 |
| BsrI | ACTGG | 2 cut(s) | 406, 594 |
| BssAI | RCCGGY | 1 cut(s) | 439 |
| BssECI | CCNNGG | 5 cut(s) | 752, 859, 902, 990, 1616 |
| BssMI | GATC | 7 cut(s) | 694, 758, 764, 878, 1082, 1292, 1578 |
| BssT1I | CCWWGG | 4 cut(s) | 752, 859, 902, 1616 |
| Bst2UI | CCWGG | 1 cut(s) | 412 |
| Bst4CI | ACNGT | 1 cut(s) | 803 |
| Bst6I | CTCTTC | 1 cut(s) | 1004 |
| BstDEI | CTNAG | 6 cut(s) | 174, 608, 1192, 1428, 1468, 1752 |
| BstDSI | CCRYGG | 1 cut(s) | 752 |
| BstF5I | GGATG | 5 cut(s) | 780, 784, 896, 1449, 1561 |
| BstKTI | GATC | 7 cut(s) | 697, 761, 767, 881, 1085, 1295, 1581 |
| BstMAI | GTCTC | 8 cut(s) | 20, 250, 362, 391, 915, 936, 978, 1592 |
| BstMBI | GATC | 7 cut(s) | 694, 758, 764, 878, 1082, 1292, 1578 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 986, 1051, 1714 |
| BstNI | CCWGG | 1 cut(s) | 412 |
| BstNSI | RCATGY | 2 cut(s) | 551, 1462 |
| BstSCI | CCNGG | 1 cut(s) | 410 |
| BstV1I | GCAGC | 1 cut(s) | 1369 |
| BstV2I | GAAGAC | 2 cut(s) | 342, 885 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 753 |
| BsuRI | GGCC | 1 cut(s) | 1660 |
| BtgI | CCRYGG | 1 cut(s) | 752 |
| BtgZI | GCGATG | 1 cut(s) | 1347 |
| BtsCI | GGATG | 5 cut(s) | 780, 784, 896, 1449, 1561 |
| BtsI | GCAGTG | 1 cut(s) | 1648 |
| BtsIMutI | CAGTG | 1 cut(s) | 1648 |
| CaiI | CAGNNNCTG | 1 cut(s) | 207 |
| Cfr10I | RCCGGY | 1 cut(s) | 439 |
| Cfr13I | GGNCC | 4 cut(s) | 61, 403, 855, 1658 |
| Csp6I | GTAC | 2 cut(s) | 194, 489 |
| CspAI | ACCGGT | 1 cut(s) | 439 |
| CviAII | CATG | 6 cut(s) | 77, 548, 753, 889, 1207, 1459 |
| CviQI | GTAC | 2 cut(s) | 194, 489 |
| DdeI | CTNAG | 6 cut(s) | 174, 608, 1192, 1428, 1468, 1752 |
| DpnI | GATC | 7 cut(s) | 696, 760, 766, 880, 1084, 1294, 1580 |
| DpnII | GATC | 7 cut(s) | 694, 758, 764, 878, 1082, 1292, 1578 |
| Eam1104I | CTCTTC | 1 cut(s) | 1004 |
| EarI | CTCTTC | 1 cut(s) | 1004 |
| EciI | GGCGGA | 1 cut(s) | 1032 |
| Ecl136II | GAGCTC | 2 cut(s) | 214, 826 |
| Eco130I | CCWWGG | 4 cut(s) | 752, 859, 902, 1616 |
| Eco24I | GRGCYC | 2 cut(s) | 216, 828 |
| Eco31I | GGTCTC | 1 cut(s) | 1592 |
| Eco47I | GGWCC | 3 cut(s) | 61, 403, 855 |
| Eco53kI | GAGCTC | 2 cut(s) | 214, 826 |
| Eco57I | CTGAAG | 4 cut(s) | 326, 336, 1114, 1703 |
| Eco88I | CYCGRG | 1 cut(s) | 634 |
| EcoICRI | GAGCTC | 2 cut(s) | 214, 826 |
| EcoO109I | RGGNCCY | 2 cut(s) | 855, 1658 |
| EcoRI | GAATTC | 1 cut(s) | 883 |
| EcoRII | CCWGG | 1 cut(s) | 410 |
| EcoT14I | CCWWGG | 4 cut(s) | 752, 859, 902, 1616 |
| EcoT22I | ATGCAT | 1 cut(s) | 1212 |
| EcoT38I | GRGCYC | 2 cut(s) | 216, 828 |
| ErhI | CCWWGG | 4 cut(s) | 752, 859, 902, 1616 |
| Esp3I | CGTCTC | 1 cut(s) | 936 |
| FaeI | CATG | 6 cut(s) | 80, 551, 756, 892, 1210, 1462 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 998, 1030 |
| FaqI | GGGAC | 4 cut(s) | 47, 841, 1160, 1438 |
| FatI | CATG | 6 cut(s) | 76, 547, 752, 888, 1206, 1458 |
| FauI | CCCGC | 2 cut(s) | 1044, 1059 |
| FauNDI | CATATG | 1 cut(s) | 325 |
| Fnu4HI | GCNGC | 1 cut(s) | 1383 |
| FokI | GGATG | 5 cut(s) | 787, 791, 883, 1436, 1568 |
| FriOI | GRGCYC | 2 cut(s) | 216, 828 |
| Fsp4HI | GCNGC | 1 cut(s) | 1383 |
| FspBI | CTAG | 5 cut(s) | 125, 333, 588, 671, 1638 |
| GluI | GCNGC | 1 cut(s) | 1383 |
| GsaI | CCCAGC | 1 cut(s) | 211 |
| GsuI | CTGGAG | 2 cut(s) | 433, 1287 |
| HaeIII | GGCC | 1 cut(s) | 1660 |
| HapII | CCGG | 1 cut(s) | 440 |
| Hin1II | CATG | 6 cut(s) | 80, 551, 756, 892, 1210, 1462 |
| HincII | GTYRAC | 1 cut(s) | 799 |
| HindII | GTYRAC | 1 cut(s) | 799 |
| HindIII | AAGCTT | 2 cut(s) | 535, 1126 |
| HinfI | GANTC | 6 cut(s) | 32, 584, 839, 971, 1529, 1730 |
| HpaI | GTTAAC | 1 cut(s) | 799 |
| HpaII | CCGG | 1 cut(s) | 440 |
| HphI | GGTGA | 4 cut(s) | 190, 518, 689, 945 |
| Hpy166II | GTNNAC | 3 cut(s) | 194, 799, 1232 |
| Hpy188I | TCNGA | 7 cut(s) | 391, 970, 1297, 1489, 1534, 1722, 1755 |
| Hpy8I | GTNNAC | 3 cut(s) | 194, 799, 1232 |
| Hpy99I | CGWCG | 1 cut(s) | 1517 |
| HpyCH4III | ACNGT | 1 cut(s) | 803 |
| HpyCH4V | TGCA | 4 cut(s) | 122, 220, 1210, 1385 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 986, 1051, 1714 |
| HpyF3I | CTNAG | 6 cut(s) | 174, 608, 1192, 1428, 1468, 1752 |
| Hsp92II | CATG | 6 cut(s) | 80, 551, 756, 892, 1210, 1462 |
| KpnI | GGTACC | 1 cut(s) | 492 |
| KspAI | GTTAAC | 1 cut(s) | 799 |
| Kzo9I | GATC | 7 cut(s) | 694, 758, 764, 878, 1082, 1292, 1578 |
| LguI | GCTCTTC | 1 cut(s) | 1004 |
| LmnI | GCTCC | 5 cut(s) | 175, 211, 219, 1158, 1705 |
| Lsp1109I | GCAGC | 1 cut(s) | 1369 |
| LweI | GCATC | 3 cut(s) | 953, 1219, 1458 |
| MaeI | CTAG | 5 cut(s) | 125, 333, 588, 671, 1638 |
| MalI | GATC | 7 cut(s) | 696, 760, 766, 880, 1084, 1294, 1580 |
| MboI | GATC | 7 cut(s) | 694, 758, 764, 878, 1082, 1292, 1578 |
| MhlI | GDGCHC | 3 cut(s) | 216, 828, 1753 |
| MlyI | GAGTC | 3 cut(s) | 41, 848, 980 |
| MmeI | TCCRAC | 1 cut(s) | 672 |
| Mph1103I | ATGCAT | 1 cut(s) | 1212 |
| MroXI | GAANNNNTTC | 4 cut(s) | 643, 1346, 1506, 1729 |
| MseI | TTAA | 3 cut(s) | 539, 579, 798 |
| MslI | CAYNNNNRTG | 1 cut(s) | 324 |
| MspI | CCGG | 1 cut(s) | 440 |
| MspR9I | CCNGG | 1 cut(s) | 412 |
| MvaI | CCWGG | 1 cut(s) | 412 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 986, 1051, 1714 |
| NcoI | CCATGG | 1 cut(s) | 752 |
| NdeI | CATATG | 1 cut(s) | 325 |
| NdeII | GATC | 7 cut(s) | 694, 758, 764, 878, 1082, 1292, 1578 |
| NlaIII | CATG | 6 cut(s) | 80, 551, 756, 892, 1210, 1462 |
| NlaIV | GGNNCC | 3 cut(s) | 63, 490, 857 |
| NmeAIII | GCCGAG | 1 cut(s) | 1015 |
| NsiI | ATGCAT | 1 cut(s) | 1212 |
| NspI | RCATGY | 2 cut(s) | 551, 1462 |
| PaeR7I | CTCGAG | 1 cut(s) | 634 |
| PciI | ACATGT | 1 cut(s) | 547 |
| PciSI | GCTCTTC | 1 cut(s) | 1004 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 653 |
| PdmI | GAANNNNTTC | 4 cut(s) | 643, 1346, 1506, 1729 |
| PfeI | GAWTC | 3 cut(s) | 584, 1529, 1730 |
| PflFI | GACNNNGTC | 1 cut(s) | 31 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 58, 207 |
| PfoI | TCCNGGA | 1 cut(s) | 410 |
| PinAI | ACCGGT | 1 cut(s) | 439 |
| PkrI | GCNGC | 1 cut(s) | 1384 |
| PleI | GAGTC | 3 cut(s) | 40, 847, 979 |
| PpsI | GAGTC | 3 cut(s) | 40, 847, 979 |
| PpuMI | RGGWCCY | 1 cut(s) | 855 |
| PscI | ACATGT | 1 cut(s) | 547 |
| PsiI | TTATAA | 1 cut(s) | 1065 |
| Psp124BI | GAGCTC | 2 cut(s) | 216, 828 |
| Psp5II | RGGWCCY | 1 cut(s) | 855 |
| Psp6I | CCWGG | 1 cut(s) | 410 |
| PspFI | CCCAGC | 1 cut(s) | 207 |
| PspGI | CCWGG | 1 cut(s) | 410 |
| PspN4I | GGNNCC | 3 cut(s) | 63, 490, 857 |
| PspPI | GGNCC | 4 cut(s) | 61, 403, 855, 1658 |
| PspPPI | RGGWCCY | 1 cut(s) | 855 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 556, 588 |
| PstNI | CAGNNNCTG | 1 cut(s) | 207 |
| PsyI | GACNNNGTC | 1 cut(s) | 31 |
| RsaI | GTAC | 2 cut(s) | 195, 490 |
| RsaNI | GTAC | 2 cut(s) | 194, 489 |
| RseI | CAYNNNNRTG | 1 cut(s) | 324 |
| SacI | GAGCTC | 2 cut(s) | 216, 828 |
| SapI | GCTCTTC | 1 cut(s) | 1004 |
| SaqAI | TTAA | 3 cut(s) | 539, 579, 798 |
| SatI | GCNGC | 1 cut(s) | 1383 |
| Sau3AI | GATC | 7 cut(s) | 694, 758, 764, 878, 1082, 1292, 1578 |
| Sau96I | GGNCC | 4 cut(s) | 61, 403, 855, 1658 |
| SchI | GAGTC | 3 cut(s) | 41, 848, 980 |
| ScrFI | CCNGG | 1 cut(s) | 412 |
| SduI | GDGCHC | 3 cut(s) | 216, 828, 1753 |
| SfaNI | GCATC | 3 cut(s) | 953, 1219, 1458 |
| Sfr274I | CTCGAG | 1 cut(s) | 634 |
| SinI | GGWCC | 3 cut(s) | 61, 403, 855 |
| SlaI | CTCGAG | 1 cut(s) | 634 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 324 |
| SmlI | CTYRAG | 5 cut(s) | 456, 622, 634, 975, 1117 |
| SmoI | CTYRAG | 5 cut(s) | 456, 622, 634, 975, 1117 |
| SpeI | ACTAGT | 1 cut(s) | 124 |
| SsiI | CCGC | 5 cut(s) | 492, 832, 1037, 1043, 1052 |
| SspMI | CTAG | 5 cut(s) | 125, 333, 588, 671, 1638 |
| SstI | GAGCTC | 2 cut(s) | 216, 828 |
| StyD4I | CCNGG | 1 cut(s) | 410 |
| StyI | CCWWGG | 4 cut(s) | 752, 859, 902, 1616 |
| TaaI | ACNGT | 1 cut(s) | 803 |
| TaqI | TCGA | 9 cut(s) | 309, 635, 647, 656, 851, 875, 881, 1512, 1745 |
| TatI | WGTACW | 1 cut(s) | 193 |
| TfiI | GAWTC | 3 cut(s) | 584, 1529, 1730 |
| Tru1I | TTAA | 3 cut(s) | 539, 579, 798 |
| Tru9I | TTAA | 3 cut(s) | 539, 579, 798 |
| TscAI | CASTG | 1 cut(s) | 1648 |
| TseI | GCWGC | 1 cut(s) | 1382 |
| TspRI | CASTG | 1 cut(s) | 1648 |
| Tth111I | GACNNNGTC | 1 cut(s) | 31 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 58, 207 |
| VpaK11BI | GGWCC | 3 cut(s) | 61, 403, 855 |
| XapI | RAATTY | 8 cut(s) | 305, 375, 680, 818, 883, 1366, 1621, 1697 |
| XbaI | TCTAGA | 1 cut(s) | 332 |
| XceI | RCATGY | 2 cut(s) | 551, 1462 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1589 |
| XhoI | CTCGAG | 1 cut(s) | 634 |
| XmnI | GAANNNNTTC | 4 cut(s) | 643, 1346, 1506, 1729 |
| XspI | CTAG | 5 cut(s) | 125, 333, 588, 671, 1638 |
| Zsp2I | ATGCAT | 1 cut(s) | 1212 |