Prupe.5G081400_v2.0.a1

Phosphopantothenoylcysteine decarboxylase subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
9470784 .. 9471478
695 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G081400.1

Sequence Viewer

Length: 543 bp
ATGAGGGTTGTTGGGGTACCAGGAACTGTCTTTCTCCTACTCTTCATGGCGGCTGCTCTTGTCCTCAGCTCTTTGCTGCAATCAATCTCGAAAGAGAGTCTTCATTTCTCATCCAATCCTCTGTTTGTGTTTTCACTATTTAACATCATCATCGTCGCCATCATTGTTGGAAGTCACAGGTCATCTTCCGGGGAAGTTGACAGTATCATACCTTTCCTATATCATCAGTATGAACCAGAAGAAGACGCAGACAATGATGTTGAGGATACAAAGAGTGATAAATACTTGAATCTGGATGGTTATGAAAATGGCAGTGACTGTGTTGATGACGAAAGTGAAGATTATAGCTTTGATTCTGATGGTTACAACGAAGATGACGACGACAATGGTAGCGATGACGAGGTTGGTTGGGGAGACATGGATGAACACAACAGTAATTTGGAGAAAAGAATCGAAGACTTCATTGATAAGGTTAACAAGGGATGGAAGGAAGAGAGGCTAAGGGATAGTCTCTCCAATCCTTTGCAGTTTAGCTACTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

181

Amino Acids

20.33

Weight (kDa)

4.05

Isoelectric Point (pI)

40.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0017949)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62935
fragaria_vesca FvH4_5g00851
malus_domestica MD00G1083200.v1.1
prunus_persica Prupe.5G081400_v2.0.a1
pyrus_communis pycom04g06910 pycom06g06410
rosa_laevigata RLG00000003695
rosa_roxburghii Rroxscaffold_3G00255560
rosa_rugosa Rorug07G0061700
rosa_samantha Rh7DG193200
rosa_wichuraiana Rw7G016460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 16
AccB1I GGYRCC 1 cut(s) 16
AciI CCGC 1 cut(s) 50
AfaI GTAC 1 cut(s) 18
AgsI TTSAA 1 cut(s) 289
AjnI CCWGG 1 cut(s) 19
AluBI AGCT 3 cut(s) 69, 348, 534
AluI AGCT 3 cut(s) 69, 348, 534
Alw26I GTCTC 2 cut(s) 408, 515
AlwNI CAGNNNCTG 2 cut(s) 26, 318
ApeKI GCWGC 2 cut(s) 53, 76
Asp718I GGTACC 1 cut(s) 16
AsuC2I CCSGG 1 cut(s) 190
BanI GGYRCC 1 cut(s) 16
BbsI GAAGAC 3 cut(s) 92, 249, 462
BbvCI CCTCAGC 1 cut(s) 65
BbvI GCAGC 2 cut(s) 40, 63
BccI CCATC 4 cut(s) 167, 290, 353, 477
BciT130I CCWGG 1 cut(s) 21
BciVI GTATCC 1 cut(s) 259
BcnI CCSGG 1 cut(s) 190
BcoDI GTCTC 2 cut(s) 408, 515
BfuI GTATCC 1 cut(s) 259
BisI GCNGC 3 cut(s) 51, 54, 77
BlsI GCNGC 3 cut(s) 52, 55, 78
Bme1390I CCNGG 2 cut(s) 21, 190
BmiI GGNNCC 1 cut(s) 18
BmrFI CCNGG 2 cut(s) 21, 190
BpiI GAAGAC 3 cut(s) 92, 249, 462
Bpu10I CCTNAGC 2 cut(s) 65, 500
BpuMI CCSGG 1 cut(s) 190
BsaJI CCNNGG 1 cut(s) 189
BseBI CCWGG 1 cut(s) 21
BseDI CCNNGG 1 cut(s) 189
BseGI GGATG 4 cut(s) 110, 301, 427, 488
BseMII CTCAG 1 cut(s) 79
BseXI GCAGC 2 cut(s) 40, 63
BshNI GGYRCC 1 cut(s) 16
BsiSI CCGG 1 cut(s) 189
BsmAI GTCTC 2 cut(s) 408, 515
BspACI CCGC 1 cut(s) 50
BspCNI CTCAG 1 cut(s) 78
BspLI GGNNCC 1 cut(s) 18
BspT107I GGYRCC 1 cut(s) 16
BssECI CCNNGG 1 cut(s) 189
Bst2UI CCWGG 1 cut(s) 21
Bst4CI ACNGT 4 cut(s) 28, 203, 320, 434
Bst6I CTCTTC 2 cut(s) 47, 486
BstDEI CTNAG 2 cut(s) 65, 500
BstF5I GGATG 4 cut(s) 110, 301, 427, 488
BstMAI GTCTC 2 cut(s) 408, 515
BstNI CCWGG 1 cut(s) 21
BstSCI CCNGG 2 cut(s) 19, 188
BstV1I GCAGC 2 cut(s) 40, 63
BstV2I GAAGAC 3 cut(s) 92, 249, 462
BsuI GTATCC 1 cut(s) 259
BtgZI GCGATG 1 cut(s) 408
BtsCI GGATG 4 cut(s) 110, 301, 427, 488
BtsI GCAGTG 1 cut(s) 319
BtsIMutI CAGTG 1 cut(s) 319
CaiI CAGNNNCTG 2 cut(s) 26, 318
CseI GACGC 1 cut(s) 254
Csp6I GTAC 1 cut(s) 17
CviAII CATG 2 cut(s) 46, 418
CviJI RGCY 5 cut(s) 53, 69, 348, 499, 534
CviKI_1 RGCY 5 cut(s) 53, 69, 348, 499, 534
CviQI GTAC 1 cut(s) 17
DdeI CTNAG 2 cut(s) 65, 500
Eam1104I CTCTTC 2 cut(s) 47, 486
EarI CTCTTC 2 cut(s) 47, 486
EcoRII CCWGG 1 cut(s) 19
FaeI CATG 2 cut(s) 49, 421
FaiI YATR 7 cut(s) 47, 209, 220, 231, 303, 345, 419
FalI AAGNNNNNCTT 2 cut(s) 84, 116
FatI CATG 2 cut(s) 45, 417
Fnu4HI GCNGC 3 cut(s) 51, 54, 77
FokI GGATG 4 cut(s) 97, 308, 434, 495
Fsp4HI GCNGC 3 cut(s) 51, 54, 77
GluI GCNGC 3 cut(s) 51, 54, 77
HapII CCGG 1 cut(s) 189
HgaI GACGC 1 cut(s) 254
Hin1II CATG 2 cut(s) 49, 421
HincII GTYRAC 2 cut(s) 199, 475
HindII GTYRAC 2 cut(s) 199, 475
HinfI GANTC 4 cut(s) 97, 289, 353, 450
HpaI GTTAAC 1 cut(s) 475
HpaII CCGG 1 cut(s) 189
Hpy166II GTNNAC 2 cut(s) 199, 475
Hpy188I TCNGA 1 cut(s) 358
Hpy188III TCNNGA 2 cut(s) 88, 293
Hpy8I GTNNAC 2 cut(s) 199, 475
Hpy99I CGWCG 2 cut(s) 158, 383
HpyAV CCTTC 1 cut(s) 481
HpyCH4III ACNGT 4 cut(s) 28, 203, 320, 434
HpyCH4V TGCA 2 cut(s) 79, 526
HpyF3I CTNAG 2 cut(s) 65, 500
Hsp92II CATG 2 cut(s) 49, 421
KpnI GGTACC 1 cut(s) 20
KspAI GTTAAC 1 cut(s) 475
LpnPI CCDG 6 cut(s) 6, 33, 163, 202, 249, 278
Lsp1109I GCAGC 2 cut(s) 40, 63
MaeIII GTNAC 3 cut(s) 173, 314, 362
MboII GAAGA 9 cut(s) 34, 92, 177, 251, 254, 350, 383, 467, 503
MluCI AATT 1 cut(s) 436
MlyI GAGTC 1 cut(s) 106
MmeI TCCRAC 1 cut(s) 148
MnlI CCTC 5 cut(s) 74, 129, 256, 394, 489
MseI TTAA 2 cut(s) 141, 474
MslI CAYNNNNRTG 1 cut(s) 228
MspI CCGG 1 cut(s) 189
MspR9I CCNGG 2 cut(s) 21, 190
MvaI CCWGG 1 cut(s) 21
NciI CCSGG 1 cut(s) 190
NlaIII CATG 2 cut(s) 49, 421
NlaIV GGNNCC 1 cut(s) 18
NmuCI GTSAC 2 cut(s) 173, 314
PcsI WCGNNNNNNNCGW 1 cut(s) 375
PfeI GAWTC 3 cut(s) 289, 353, 450
PkrI GCNGC 3 cut(s) 52, 55, 78
PleI GAGTC 1 cut(s) 105
PpsI GAGTC 1 cut(s) 105
Psp6I CCWGG 1 cut(s) 19
PspGI CCWGG 1 cut(s) 19
PspN4I GGNNCC 1 cut(s) 18
PstNI CAGNNNCTG 2 cut(s) 26, 318
RsaI GTAC 1 cut(s) 18
RsaNI GTAC 1 cut(s) 17
RseI CAYNNNNRTG 1 cut(s) 228
SaqAI TTAA 2 cut(s) 141, 474
SatI GCNGC 3 cut(s) 51, 54, 77
SchI GAGTC 1 cut(s) 106
ScrFI CCNGG 2 cut(s) 21, 190
SetI ASST 7 cut(s) 71, 182, 214, 350, 405, 474, 536
SmiMI CAYNNNNRTG 1 cut(s) 228
Sse9I AATT 1 cut(s) 436
SsiI CCGC 1 cut(s) 50
StyD4I CCNGG 2 cut(s) 19, 188
TaaI ACNGT 4 cut(s) 28, 203, 320, 434
TaqI TCGA 2 cut(s) 89, 453
TasI AATT 1 cut(s) 436
TauI GCSGC 1 cut(s) 53
TfiI GAWTC 3 cut(s) 289, 353, 450
Tru1I TTAA 2 cut(s) 141, 474
Tru9I TTAA 2 cut(s) 141, 474
TscAI CASTG 1 cut(s) 319
TseFI GTSAC 2 cut(s) 173, 314
TseI GCWGC 2 cut(s) 53, 76
Tsp45I GTSAC 2 cut(s) 173, 314
TspDTI ATGAA 6 cut(s) 34, 92, 246, 318, 438, 451
TspRI CASTG 1 cut(s) 319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.