Prupe.5G095900_v2.0.a1

Remorin-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
10520559 .. 10522512
1954 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G095900.2

Sequence Viewer

Length: 435 bp
ATGGCGGATGAAAAACAAAAGGCTGCACTTGAAAAGGATACAAGTGCAATAAAAAAAGTTTTGTCAACCAAGTCGTTGGGTTTAATCAAAGCATGGGAAGAAAGCGAGAAAACAAAAGTAGACAACAAGACAAATAAAAAGTTATCTAATGTTGTTGCATGGGAGCTCAGCAAGCAAGCATACATTGATGCGCGACAGAAGAAGTTTGAGCAAAAACTAGAAAGGAAGAAGGCAATGTACGTAGAAAAGATGCAAAACAAAGTTGCTGAGATTCATAAGAAAGCAGACGAAAAAAGGACGATGGTTGAAGATGTGAAAGAGGAAGAACGTACAAAGGTAAAAGAGAAGGCTGACAAATTCCGTGAAATTGGAAAACACTATTGTCATTGGCTTCATCCTTGGAAGCGGTTGCCGTTGTCGTGGTCGGAAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

145

Amino Acids

17.06

Weight (kDa)

9.59

Isoelectric Point (pI)

43.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0016325)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 120
AccII CGCG 1 cut(s) 193
AciI CCGC 2 cut(s) 5, 406
AcsI RAATTY 1 cut(s) 356
AfaI GTAC 2 cut(s) 239, 331
AgsI TTSAA 2 cut(s) 32, 308
AluBI AGCT 1 cut(s) 166
AluI AGCT 1 cut(s) 166
Alw21I GWGCWC 1 cut(s) 168
ApeKI GCWGC 1 cut(s) 23
ApoI RAATTY 1 cut(s) 356
AspLEI GCGC 1 cut(s) 193
BanII GRGCYC 1 cut(s) 168
BarI GAAGNNNNNNTAC 2 cut(s) 221, 253
Bbv12I GWGCWC 1 cut(s) 168
BbvI GCAGC 1 cut(s) 10
BccI CCATC 1 cut(s) 295
BceAI ACGGC 1 cut(s) 397
BciVI GTATCC 1 cut(s) 31
BfaI CTAG 1 cut(s) 218
BfuI GTATCC 1 cut(s) 31
BisI GCNGC 1 cut(s) 24
BlpI GCTNAGC 1 cut(s) 167
BlsI GCNGC 1 cut(s) 25
BmsI GCATC 2 cut(s) 178, 240
Bpu1102I GCTNAGC 1 cut(s) 167
BsaAI YACGTR 1 cut(s) 241
BsaJI CCNNGG 1 cut(s) 398
Bse3DI GCAATG 1 cut(s) 240
BseDI CCNNGG 1 cut(s) 398
BseGI GGATG 2 cut(s) 13, 394
BseMI GCAATG 1 cut(s) 240
BseMII CTCAG 2 cut(s) 181, 258
BseXI GCAGC 1 cut(s) 10
BsgI GTGCAG 1 cut(s) 9
Bsh1236I CGCG 1 cut(s) 193
BsiHKAI GWGCWC 1 cut(s) 168
Bsp1286I GDGCHC 1 cut(s) 168
Bsp1720I GCTNAGC 1 cut(s) 167
BspACI CCGC 2 cut(s) 5, 406
BspCNI CTCAG 2 cut(s) 180, 259
BspFNI CGCG 1 cut(s) 193
BsrDI GCAATG 1 cut(s) 240
BssECI CCNNGG 1 cut(s) 398
BssT1I CCWWGG 1 cut(s) 398
BstBAI YACGTR 1 cut(s) 241
BstC8I GCNNGC 2 cut(s) 173, 177
BstDEI CTNAG 2 cut(s) 167, 267
BstF5I GGATG 2 cut(s) 13, 394
BstFNI CGCG 1 cut(s) 193
BstHHI GCGC 1 cut(s) 193
BstMWI GCNNNNNNNGC 1 cut(s) 172
BstSNI TACGTA 1 cut(s) 241
BstUI CGCG 1 cut(s) 193
BstV1I GCAGC 1 cut(s) 10
BstXI CCANNNNNNTGG 1 cut(s) 76
BsuI GTATCC 1 cut(s) 31
BtsCI GGATG 2 cut(s) 13, 394
Cac8I GCNNGC 2 cut(s) 173, 177
CfoI GCGC 1 cut(s) 193
Csp6I GTAC 2 cut(s) 238, 330
CviAII CATG 2 cut(s) 93, 159
CviJI RGCY 4 cut(s) 23, 166, 350, 391
CviKI_1 RGCY 4 cut(s) 23, 166, 350, 391
CviQI GTAC 2 cut(s) 238, 330
DdeI CTNAG 2 cut(s) 167, 267
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 166
Eco105I TACGTA 1 cut(s) 241
Eco130I CCWWGG 1 cut(s) 398
Eco24I GRGCYC 1 cut(s) 168
Eco53kI GAGCTC 1 cut(s) 166
EcoICRI GAGCTC 1 cut(s) 166
EcoT14I CCWWGG 1 cut(s) 398
EcoT38I GRGCYC 1 cut(s) 168
ErhI CCWWGG 1 cut(s) 398
FaeI CATG 2 cut(s) 96, 162
FaiI YATR 4 cut(s) 94, 160, 181, 276
FatI CATG 2 cut(s) 92, 158
FblI GTMKAC 1 cut(s) 120
Fnu4HI GCNGC 1 cut(s) 24
FokI GGATG 2 cut(s) 20, 381
FriOI GRGCYC 1 cut(s) 168
Fsp4HI GCNGC 1 cut(s) 24
FspBI CTAG 1 cut(s) 218
GlaI GCGC 1 cut(s) 192
GluI GCNGC 1 cut(s) 24
HhaI GCGC 1 cut(s) 193
Hin1II CATG 2 cut(s) 96, 162
Hin6I GCGC 1 cut(s) 191
HinP1I GCGC 1 cut(s) 191
HincII GTYRAC 1 cut(s) 66
HindII GTYRAC 1 cut(s) 66
HinfI GANTC 1 cut(s) 271
Hpy166II GTNNAC 2 cut(s) 66, 121
Hpy188I TCNGA 1 cut(s) 427
Hpy8I GTNNAC 2 cut(s) 66, 121
HpyAV CCTTC 2 cut(s) 223, 340
HpyCH4IV ACGT 2 cut(s) 240, 328
HpyCH4V TGCA 4 cut(s) 26, 47, 158, 253
HpyF10VI GCNNNNNNNGC 1 cut(s) 172
HpyF3I CTNAG 2 cut(s) 167, 267
HpySE526I ACGT 2 cut(s) 240, 328
Hsp92II CATG 2 cut(s) 96, 162
HspAI GCGC 1 cut(s) 191
LmnI GCTCC 1 cut(s) 163
Lsp1109I GCAGC 1 cut(s) 10
LweI GCATC 2 cut(s) 178, 240
MaeI CTAG 1 cut(s) 218
MaeII ACGT 2 cut(s) 240, 328
MboII GAAGA 5 cut(s) 110, 211, 238, 320, 335
MhlI GDGCHC 1 cut(s) 168
MluCI AATT 2 cut(s) 356, 366
MmeI TCCRAC 1 cut(s) 405
MnlI CCTC 1 cut(s) 313
MseI TTAA 1 cut(s) 83
MvnI CGCG 1 cut(s) 193
MwoI GCNNNNNNNGC 1 cut(s) 172
NlaIII CATG 2 cut(s) 96, 162
PfeI GAWTC 1 cut(s) 271
PkrI GCNGC 1 cut(s) 25
Ppu21I YACGTR 1 cut(s) 241
Psp124BI GAGCTC 1 cut(s) 168
RsaI GTAC 2 cut(s) 239, 331
RsaNI GTAC 2 cut(s) 238, 330
SacI GAGCTC 1 cut(s) 168
SaqAI TTAA 1 cut(s) 83
SatI GCNGC 1 cut(s) 24
SduI GDGCHC 1 cut(s) 168
SetI ASST 4 cut(s) 168, 243, 331, 339
SfaNI GCATC 2 cut(s) 178, 240
SnaBI TACGTA 1 cut(s) 241
Sse9I AATT 2 cut(s) 356, 366
SsiI CCGC 2 cut(s) 5, 406
SspMI CTAG 1 cut(s) 218
SstI GAGCTC 1 cut(s) 168
StyI CCWWGG 1 cut(s) 398
TaiI ACGT 2 cut(s) 243, 331
TasI AATT 2 cut(s) 356, 366
TfiI GAWTC 1 cut(s) 271
Tru1I TTAA 1 cut(s) 83
Tru9I TTAA 1 cut(s) 83
TseI GCWGC 1 cut(s) 23
TspDTI ATGAA 3 cut(s) 24, 263, 383
TspGWI ACGGA 1 cut(s) 350
XapI RAATTY 1 cut(s) 356
XmiI GTMKAC 1 cut(s) 120
XspI CTAG 1 cut(s) 218
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.