Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0013808

Physical Location & Seq

Genomic Coordinates Forward (+)

10689187 .. 10691521

Gene Structure 2335 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G098400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 714 bp

ATGCTCTGCCCTTCTACTCGCTTTCTCTTACGAAGAAATCTCAGTGTAACAGCTTTATCTGCTTCACTGCTTTCGCCAAAGCAATTCTCGGCCAATTCCAAGCAGACCCTTTTGCGTTTTTCACAGGTTTCGTTGTCTTCTCCGTCAATCAAAGTAGCGTTTTCGAGCCCGGTTTGGTGTACTTTGCGATCGAACAGTACAATGGCTAGCCAGTCTGGGTCTGGAAGTAAATCTATCCATGATTTCACTGTCAAGGATGCCAAGGGTAAAGATGTTGATCTTAGCATCTACAAAGGGAAGGTTCTGTTGATTGTCAACGTTGCATCACAATGTGGCTTGACTAATTCAAACTACACAGAGCTGAGTCAGTTGTATGAGAAATACAAAAATCAAGGTTTGGAAATCTTGGCATTCCCATGCAATCAGTTTGGAGCTCAGGAGCCAGGATCAAATGATGAGATTGTAGAGTTTGCTTGCACTCGCTTTAAGGCTGAGTATCCCATCTTTGATAAGGTGGATGTGAATGGTGACAATGCTGCTCCCATTTACAAGTTCTTGAAGTCGAGCAAGGGTGGGCTCTTTGGTGACGGCATTAAGTGGAACTTCTCCAAATTCCTTGTTGACAAAGAAGGGAATGTTGTTGACCGTTATGCCCCTACAACTACTCCTCTTAGCATTGAGAAGGATGTAAAGAAACTGTTGGGGGTTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004601 GO:0004602 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0005886 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009628 GO:0009636 GO:0009651 GO:0009987 GO:0010035 GO:0010038 GO:0016020 GO:0016209 GO:0016491 GO:0016684 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0048046 GO:0050896 GO:0051716 GO:0055114 GO:0070887 GO:0071944 GO:0097237 GO:0098754 GO:0098869 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00480 ko00590 ko04918 map00480 map00590 map04918

Pfam Domains

Protein Families

GSHPx

Protein Analysis

238

Amino Acids

25.97

Weight (kDa)

9.2

Isoelectric Point (pI)

37.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013808)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11600
fragaria_vesca	FvH4_5g02130
malus_domestica	MD06G1081300.v1.1 MD14G1103200.v1.1
prunus_persica	Prupe.5G098400_v2.0.a1
pyrus_communis	pycom06g07830
rosa_chinensis	RchiOBHm_Chr7g0198001
rosa_laevigata	RLG00000003894
rosa_multiflora	Rmu_sc0000221.1_g000037 Rmu_sc0001082.1_g000005
rosa_roxburghii	Rroxscaffold_3G00258020
rosa_rugosa	Rorug07G0045200
rosa_samantha	Rh7AG168700 Rh7BG171800 Rh7CG178200 Rh7DG171000
rosa_wichuraiana	Rw7G014740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AclI	AACGTT	1 cut(s)	318
AclWI	GGATC	1 cut(s)	454
AcoI	YGGCCR	1 cut(s)	90
AcsI	RAATTY	1 cut(s)	611
AdeI	CACNNNGTG	1 cut(s)	332
AfaI	GTAC	2 cut(s)	181, 199
AgsI	TTSAA	2 cut(s)	348, 559
AjnI	CCWGG	1 cut(s)	442
AluBI	AGCT	3 cut(s)	53, 361, 434
AluI	AGCT	3 cut(s)	53, 361, 434
Alw21I	GWGCWC	1 cut(s)	436
AlwI	GGATC	1 cut(s)	454
AoxI	GGCC	1 cut(s)	90
ApeKI	GCWGC	1 cut(s)	536
ApoI	RAATTY	1 cut(s)	611
AsuC2I	CCSGG	1 cut(s)	170
AsuHPI	GGTGA	2 cut(s)	539, 596
AsuNHI	GCTAGC	1 cut(s)	206
BanII	GRGCYC	3 cut(s)	170, 436, 579
BbsI	GAAGAC	1 cut(s)	129
Bbv12I	GWGCWC	1 cut(s)	436
BbvI	GCAGC	1 cut(s)	523
BccI	CCATC	1 cut(s)	509
BceAI	ACGGC	1 cut(s)	604
BciT130I	CCWGG	1 cut(s)	444
BciVI	GTATCC	1 cut(s)	507
BcnI	CCSGG	1 cut(s)	170
BfaI	CTAG	1 cut(s)	207
BfuI	GTATCC	1 cut(s)	507
BisI	GCNGC	1 cut(s)	537
BlsI	GCNGC	1 cut(s)	538
Bme1390I	CCNGG	2 cut(s)	170, 444
BmiI	GGNNCC	1 cut(s)	441
BmrFI	CCNGG	2 cut(s)	170, 444
BmsI	GCATC	3 cut(s)	247, 294, 332
BmtI	GCTAGC	1 cut(s)	210
BpiI	GAAGAC	1 cut(s)	129
Bpu10I	CCTNAGC	1 cut(s)	435
BpuMI	CCSGG	1 cut(s)	170
BsaBI	GATNNNNATC	1 cut(s)	276
BsaJI	CCNNGG	1 cut(s)	261
BsaXI	ACNNNNNCTCC	2 cut(s)	649, 679
Bse1I	ACTGG	1 cut(s)	211
Bse8I	GATNNNNATC	1 cut(s)	276
BseBI	CCWGG	1 cut(s)	444
BseDI	CCNNGG	1 cut(s)	261
BseGI	GGATG	3 cut(s)	262, 523, 691
BseJI	GATNNNNATC	1 cut(s)	276
BseMII	CTCAG	4 cut(s)	55, 353, 449, 483
BseNI	ACTGG	1 cut(s)	211
BseRI	GAGGAG	1 cut(s)	657
BseXI	GCAGC	1 cut(s)	523
Bsh1285I	CGRYCG	1 cut(s)	191
BshFI	GGCC	1 cut(s)	92
BsiEI	CGRYCG	1 cut(s)	191
BsiHKAI	GWGCWC	1 cut(s)	436
BsiSI	CCGG	1 cut(s)	170
BsmI	GAATGC	1 cut(s)	410
BsnI	GGCC	1 cut(s)	92
Bsp1286I	GDGCHC	3 cut(s)	170, 436, 579
Bsp143I	GATC	3 cut(s)	188, 277, 446
BspANI	GGCC	1 cut(s)	92
BspCNI	CTCAG	4 cut(s)	54, 354, 448, 484
BspLI	GGNNCC	1 cut(s)	441
BspOI	GCTAGC	1 cut(s)	210
BspPI	GGATC	1 cut(s)	454
BsrI	ACTGG	1 cut(s)	211
BssECI	CCNNGG	1 cut(s)	261
BssMI	GATC	3 cut(s)	188, 277, 446
BssT1I	CCWWGG	1 cut(s)	261
Bst2UI	CCWGG	1 cut(s)	444
Bst4CI	ACNGT	4 cut(s)	197, 250, 647, 699
BstC8I	GCNNGC	2 cut(s)	208, 475
BstDEI	CTNAG	6 cut(s)	41, 281, 362, 435, 492, 671
BstF5I	GGATG	3 cut(s)	262, 523, 691
BstKTI	GATC	3 cut(s)	191, 280, 449
BstMBI	GATC	3 cut(s)	188, 277, 446
BstMCI	CGRYCG	1 cut(s)	191
BstMWI	GCNNNNNNNGC	1 cut(s)	59
BstNI	CCWGG	1 cut(s)	444
BstSCI	CCNGG	2 cut(s)	168, 442
BstV1I	GCAGC	1 cut(s)	523
BstV2I	GAAGAC	1 cut(s)	129
BsuI	GTATCC	1 cut(s)	507
BsuRI	GGCC	1 cut(s)	92
BtsCI	GGATG	3 cut(s)	262, 523, 691
BtsI	GCAGTG	1 cut(s)	65
BtsIMutI	CAGTG	3 cut(s)	49, 65, 246
Cac8I	GCNNGC	2 cut(s)	208, 475
Csp6I	GTAC	2 cut(s)	180, 198
CviAII	CATG	3 cut(s)	239, 417, 711
CviQI	GTAC	2 cut(s)	180, 198
DdeI	CTNAG	6 cut(s)	41, 281, 362, 435, 492, 671
DpnI	GATC	3 cut(s)	190, 279, 448
DpnII	GATC	3 cut(s)	188, 277, 446
DraIII	CACNNNGTG	1 cut(s)	332
EaeI	YGGCCR	1 cut(s)	90
Ecl136II	GAGCTC	1 cut(s)	434
Eco130I	CCWWGG	1 cut(s)	261
Eco24I	GRGCYC	3 cut(s)	170, 436, 579
Eco53kI	GAGCTC	1 cut(s)	434
EcoICRI	GAGCTC	1 cut(s)	434
EcoRII	CCWGG	1 cut(s)	442
EcoT14I	CCWWGG	1 cut(s)	261
EcoT38I	GRGCYC	3 cut(s)	170, 436, 579
ErhI	CCWWGG	1 cut(s)	261
FaeI	CATG	3 cut(s)	242, 420, 714
FaiI	YATR	5 cut(s)	240, 375, 418, 651, 712
FalI	AAGNNNNNCTT	2 cut(s)	587, 619
FatI	CATG	3 cut(s)	238, 416, 710
Fnu4HI	GCNGC	1 cut(s)	537
FokI	GGATG	3 cut(s)	269, 530, 698
FriOI	GRGCYC	3 cut(s)	170, 436, 579
Fsp4HI	GCNGC	1 cut(s)	537
FspBI	CTAG	1 cut(s)	207
GluI	GCNGC	1 cut(s)	537
HaeIII	GGCC	1 cut(s)	92
HapII	CCGG	1 cut(s)	170
Hin1II	CATG	3 cut(s)	242, 420, 714
HincII	GTYRAC	3 cut(s)	316, 622, 643
HindII	GTYRAC	3 cut(s)	316, 622, 643
HinfI	GANTC	1 cut(s)	364
HpaII	CCGG	1 cut(s)	170
HphI	GGTGA	2 cut(s)	539, 596
Hpy166II	GTNNAC	4 cut(s)	180, 316, 622, 643
Hpy188III	TCNNGA	3 cut(s)	222, 437, 556
Hpy8I	GTNNAC	4 cut(s)	180, 316, 622, 643
HpyAV	CCTTC	4 cut(s)	21, 292, 623, 676
HpyCH4III	ACNGT	4 cut(s)	197, 250, 647, 699
HpyCH4IV	ACGT	1 cut(s)	318
HpyCH4V	TGCA	4 cut(s)	323, 420, 477, 710
HpyF10VI	GCNNNNNNNGC	1 cut(s)	59
HpyF3I	CTNAG	6 cut(s)	41, 281, 362, 435, 492, 671
HpySE526I	ACGT	1 cut(s)	318
Hsp92II	CATG	3 cut(s)	242, 420, 714
Kzo9I	GATC	3 cut(s)	188, 277, 446
LmnI	GCTCC	3 cut(s)	431, 439, 544
LpnPI	CCDG	8 cut(s)	110, 183, 201, 207, 224, 422, 429, 456
Lsp1109I	GCAGC	1 cut(s)	523
LweI	GCATC	3 cut(s)	247, 294, 332
MaeI	CTAG	1 cut(s)	207
MaeII	ACGT	1 cut(s)	318
MaeIII	GTNAC	3 cut(s)	46, 527, 584
MalI	GATC	3 cut(s)	190, 279, 448
MboI	GATC	3 cut(s)	188, 277, 446
MboII	GAAGA	2 cut(s)	45, 129
MhlI	GDGCHC	3 cut(s)	170, 436, 579
MluCI	AATT	4 cut(s)	83, 94, 343, 611
MlyI	GAGTC	1 cut(s)	373
MnlI	CCTC	1 cut(s)	678
MseI	TTAA	2 cut(s)	486, 594
MslI	CAYNNNNRTG	2 cut(s)	328, 415
MspI	CCGG	1 cut(s)	170
MspR9I	CCNGG	2 cut(s)	170, 444
Mva1269I	GAATGC	1 cut(s)	410
MvaI	CCWGG	1 cut(s)	444
MwoI	GCNNNNNNNGC	1 cut(s)	59
NciI	CCSGG	1 cut(s)	170
NdeII	GATC	3 cut(s)	188, 277, 446
NheI	GCTAGC	1 cut(s)	206
NlaIII	CATG	3 cut(s)	242, 420, 714
NlaIV	GGNNCC	1 cut(s)	441
NmeAIII	GCCGAG	1 cut(s)	68
NmuCI	GTSAC	2 cut(s)	527, 584
PctI	GAATGC	1 cut(s)	410
PkrI	GCNGC	1 cut(s)	538
Ple19I	CGATCG	1 cut(s)	191
PleI	GAGTC	1 cut(s)	372
PpsI	GAGTC	1 cut(s)	372
Psp124BI	GAGCTC	1 cut(s)	436
Psp1406I	AACGTT	1 cut(s)	318
Psp6I	CCWGG	1 cut(s)	442
PspGI	CCWGG	1 cut(s)	442
PspN4I	GGNNCC	1 cut(s)	441
PvuI	CGATCG	1 cut(s)	191
RsaI	GTAC	2 cut(s)	181, 199
RsaNI	GTAC	2 cut(s)	180, 198
RseI	CAYNNNNRTG	2 cut(s)	328, 415
SacI	GAGCTC	1 cut(s)	436
SaqAI	TTAA	2 cut(s)	486, 594
SatI	GCNGC	1 cut(s)	537
Sau3AI	GATC	3 cut(s)	188, 277, 446
SchI	GAGTC	1 cut(s)	373
ScrFI	CCNGG	2 cut(s)	170, 444
SduI	GDGCHC	3 cut(s)	170, 436, 579
SetI	ASST	8 cut(s)	55, 129, 303, 321, 363, 397, 436, 516
SfaNI	GCATC	3 cut(s)	247, 294, 332
SmiMI	CAYNNNNRTG	2 cut(s)	328, 415
Sse9I	AATT	4 cut(s)	83, 94, 343, 611
SspMI	CTAG	1 cut(s)	207
SstI	GAGCTC	1 cut(s)	436
StyD4I	CCNGG	2 cut(s)	168, 442
StyI	CCWWGG	1 cut(s)	261
TaaI	ACNGT	4 cut(s)	197, 250, 647, 699
TaiI	ACGT	1 cut(s)	321
TaqI	TCGA	3 cut(s)	164, 191, 563
TasI	AATT	4 cut(s)	83, 94, 343, 611
TatI	WGTACW	2 cut(s)	179, 197
Tru1I	TTAA	2 cut(s)	486, 594
Tru9I	TTAA	2 cut(s)	486, 594
TscAI	CASTG	3 cut(s)	49, 72, 253
TseFI	GTSAC	2 cut(s)	527, 584
TseI	GCWGC	1 cut(s)	536
Tsp45I	GTSAC	2 cut(s)	527, 584
TspGWI	ACGGA	1 cut(s)	132
TspRI	CASTG	3 cut(s)	49, 72, 253
XapI	RAATTY	1 cut(s)	611
XcmI	CCANNNNNNNNNTGG	1 cut(s)	218
XspI	CTAG	1 cut(s)	207

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.