Prupe.5G116900_v2.0.a1

Protein of unknown function (DUF3593)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
11871716 .. 11873360
1645 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G116900.1

Sequence Viewer

Length: 576 bp
ATGACTATTGCTTGTATTCAATCTCTTTGTAAAGCCCCCACCTTTCTTCTCCCTTCAACTTTTCTGGGTTCCTCTTATTTCTTGCAGAGTCCACAAGCAAACCCATTTTCAAGAAACAGAGACTCCAAGTATTACATAGACAGAACGATTGACAATAAAAAAACAAGAGGTGGGATTGTCTGTGGGGTGCTTTTCCCAGTTGATCCATGGGCACCCAGCATTGATTCACAGAGCATAGCTTCACAGCTCTTTGCAGCCTCCTTGTTTCCCTACCTTGGTTTCTTGTACTTCATCACCAAATCAAAGTCTGCCCCAAAGCTCACCCTTTTTGGGTTCTACTTCTTGCTAGCTTTTGTGGGGGCCACCATCCCTGCTGGAATTTATGCAAAGGTGAAATATGGCACTTCATTGGCGAATGTCGATTGGTTACATGGTGAGGCTGAGGCACTTCTCACTCTAACCAACATATTCATTGTGTTGGGGTTGAGAAGAGCCCTCAGAAAAGCTGAAGATGCAAAAGCAAGAACATCAACTCCTATATCAGGGTTGAAGGAGGAGAAGAAAACTTCTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

192

Amino Acids

20.99

Weight (kDa)

9.63

Isoelectric Point (pI)

48.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 211
AclWI GGATC 1 cut(s) 197
AcsI RAATTY 1 cut(s) 378
AcuI CTGAAG 1 cut(s) 528
AfaI GTAC 1 cut(s) 287
AfiI CCNNNNNNNGG 3 cut(s) 275, 330, 542
AgsI TTSAA 4 cut(s) 20, 57, 111, 550
AloI GAACNNNNNNTCC 2 cut(s) 517, 549
AluBI AGCT 5 cut(s) 239, 247, 319, 350, 506
AluI AGCT 5 cut(s) 239, 247, 319, 350, 506
Alw26I GTCTC 1 cut(s) 114
AlwI GGATC 1 cut(s) 197
AoxI GGCC 1 cut(s) 360
ApeKI GCWGC 1 cut(s) 254
ApoI RAATTY 1 cut(s) 378
AspS9I GGNCC 1 cut(s) 360
AsuHPI GGTGA 4 cut(s) 286, 313, 403, 446
AsuNHI GCTAGC 1 cut(s) 346
BaeGI GKGCMC 1 cut(s) 214
BanI GGYRCC 1 cut(s) 211
BanII GRGCYC 1 cut(s) 496
BbvCI CCTCAGC 1 cut(s) 441
BbvI GCAGC 1 cut(s) 266
BccI CCATC 1 cut(s) 374
BcoDI GTCTC 1 cut(s) 114
BfaI CTAG 1 cut(s) 347
BisI GCNGC 1 cut(s) 255
BlsI GCNGC 1 cut(s) 256
BmgT120I GGNCC 1 cut(s) 360
BmiI GGNNCC 3 cut(s) 70, 213, 361
BmrI ACTGGG 1 cut(s) 191
BmsI GCATC 1 cut(s) 502
BmtI GCTAGC 1 cut(s) 350
BmuI ACTGGG 1 cut(s) 191
Bpu10I CCTNAGC 1 cut(s) 441
BsaJI CCNNGG 2 cut(s) 206, 274
BsaXI ACNNNNNCTCC 4 cut(s) 107, 137, 517, 547
Bsc4I CCNNNNNNNGG 3 cut(s) 275, 330, 542
Bse1I ACTGG 1 cut(s) 197
BseDI CCNNGG 2 cut(s) 206, 274
BseGI GGATG 1 cut(s) 366
BseLI CCNNNNNNNGG 3 cut(s) 275, 330, 542
BseMII CTCAG 2 cut(s) 432, 511
BseNI ACTGG 1 cut(s) 197
BseRI GAGGAG 1 cut(s) 569
BseSI GKGCMC 1 cut(s) 214
BseXI GCAGC 1 cut(s) 266
BseYI CCCAGC 1 cut(s) 215
BshFI GGCC 1 cut(s) 362
BshNI GGYRCC 1 cut(s) 211
BslI CCNNNNNNNGG 3 cut(s) 275, 330, 542
BsmAI GTCTC 1 cut(s) 114
BsnI GGCC 1 cut(s) 362
Bsp1286I GDGCHC 2 cut(s) 214, 496
Bsp143I GATC 1 cut(s) 202
Bsp19I CCATGG 1 cut(s) 206
BspANI GGCC 1 cut(s) 362
BspCNI CTCAG 2 cut(s) 433, 510
BspLI GGNNCC 3 cut(s) 70, 213, 361
BspOI GCTAGC 1 cut(s) 350
BspPI GGATC 1 cut(s) 197
BspQI GCTCTTC 1 cut(s) 484
BspT107I GGYRCC 1 cut(s) 211
BsrI ACTGG 1 cut(s) 197
BssECI CCNNGG 2 cut(s) 206, 274
BssMI GATC 1 cut(s) 202
BssT1I CCWWGG 2 cut(s) 206, 274
Bst6I CTCTTC 1 cut(s) 484
BstC8I GCNNGC 1 cut(s) 348
BstDEI CTNAG 2 cut(s) 441, 497
BstDSI CCRYGG 1 cut(s) 206
BstENI CCTNNNNNAGG 1 cut(s) 540
BstF5I GGATG 1 cut(s) 366
BstKTI GATC 1 cut(s) 205
BstMAI GTCTC 1 cut(s) 114
BstMBI GATC 1 cut(s) 202
BstMWI GCNNNNNNNGC 1 cut(s) 512
BstSLI GKGCMC 1 cut(s) 214
BstV1I GCAGC 1 cut(s) 266
BsuRI GGCC 1 cut(s) 362
BtgI CCRYGG 1 cut(s) 206
BtsCI GGATG 1 cut(s) 366
Cac8I GCNNGC 1 cut(s) 348
Cfr13I GGNCC 1 cut(s) 360
Csp6I GTAC 1 cut(s) 286
CviAII CATG 2 cut(s) 207, 431
CviQI GTAC 1 cut(s) 286
DdeI CTNAG 2 cut(s) 441, 497
DpnI GATC 1 cut(s) 204
DpnII GATC 1 cut(s) 202
Eam1104I CTCTTC 1 cut(s) 484
EarI CTCTTC 1 cut(s) 484
Eco130I CCWWGG 2 cut(s) 206, 274
Eco24I GRGCYC 1 cut(s) 496
Eco57I CTGAAG 1 cut(s) 528
EcoNI CCTNNNNNAGG 1 cut(s) 540
EcoT14I CCWWGG 2 cut(s) 206, 274
EcoT38I GRGCYC 1 cut(s) 496
ErhI CCWWGG 2 cut(s) 206, 274
FaeI CATG 2 cut(s) 210, 434
FaiI YATR 8 cut(s) 137, 208, 236, 384, 399, 432, 467, 539
FatI CATG 2 cut(s) 206, 430
Fnu4HI GCNGC 1 cut(s) 255
FokI GGATG 1 cut(s) 353
FriOI GRGCYC 1 cut(s) 496
Fsp4HI GCNGC 1 cut(s) 255
FspBI CTAG 1 cut(s) 347
GluI GCNGC 1 cut(s) 255
GsaI CCCAGC 1 cut(s) 219
HaeIII GGCC 1 cut(s) 362
Hin1II CATG 2 cut(s) 210, 434
HinfI GANTC 3 cut(s) 88, 122, 224
HphI GGTGA 4 cut(s) 286, 313, 403, 446
Hpy166II GTNNAC 1 cut(s) 92
Hpy188I TCNGA 1 cut(s) 500
Hpy188III TCNNGA 1 cut(s) 111
Hpy8I GTNNAC 1 cut(s) 92
HpyAV CCTTC 2 cut(s) 63, 544
HpyCH4V TGCA 4 cut(s) 85, 254, 386, 515
HpyF10VI GCNNNNNNNGC 1 cut(s) 512
HpyF3I CTNAG 2 cut(s) 441, 497
Hsp92II CATG 2 cut(s) 210, 434
Kzo9I GATC 1 cut(s) 202
LguI GCTCTTC 1 cut(s) 484
LpnPI CCDG 6 cut(s) 50, 210, 229, 360, 384, 528
Lsp1109I GCAGC 1 cut(s) 266
LweI GCATC 1 cut(s) 502
MaeI CTAG 1 cut(s) 347
MaeIII GTNAC 1 cut(s) 426
MalI GATC 1 cut(s) 204
MboI GATC 1 cut(s) 202
MboII GAAGA 4 cut(s) 38, 501, 521, 571
MhlI GDGCHC 2 cut(s) 214, 496
MluCI AATT 1 cut(s) 378
MlyI GAGTC 2 cut(s) 97, 116
MnlI CCTC 7 cut(s) 82, 161, 268, 430, 436, 506, 547
MwoI GCNNNNNNNGC 1 cut(s) 512
NcoI CCATGG 1 cut(s) 206
NdeII GATC 1 cut(s) 202
NheI GCTAGC 1 cut(s) 346
NlaIII CATG 2 cut(s) 210, 434
NlaIV GGNNCC 3 cut(s) 70, 213, 361
PciSI GCTCTTC 1 cut(s) 484
PfeI GAWTC 1 cut(s) 224
PkrI GCNGC 1 cut(s) 256
PleI GAGTC 2 cut(s) 96, 116
PpsI GAGTC 2 cut(s) 96, 116
PspFI CCCAGC 1 cut(s) 215
PspN4I GGNNCC 3 cut(s) 70, 213, 361
PspPI GGNCC 1 cut(s) 360
RsaI GTAC 1 cut(s) 287
RsaNI GTAC 1 cut(s) 286
SapI GCTCTTC 1 cut(s) 484
SatI GCNGC 1 cut(s) 255
Sau3AI GATC 1 cut(s) 202
Sau96I GGNCC 1 cut(s) 360
SchI GAGTC 2 cut(s) 97, 116
SduI GDGCHC 2 cut(s) 214, 496
SetI ASST 9 cut(s) 44, 172, 241, 249, 276, 321, 352, 393, 508
SfaNI GCATC 1 cut(s) 502
Sse9I AATT 1 cut(s) 378
SspMI CTAG 1 cut(s) 347
StyI CCWWGG 2 cut(s) 206, 274
TaqI TCGA 1 cut(s) 420
TasI AATT 1 cut(s) 378
TatI WGTACW 1 cut(s) 285
TfiI GAWTC 1 cut(s) 224
TseI GCWGC 1 cut(s) 254
TspDTI ATGAA 3 cut(s) 280, 396, 460
XagI CCTNNNNNAGG 1 cut(s) 540
XapI RAATTY 1 cut(s) 378
XcmI CCANNNNNNNNNTGG 1 cut(s) 204
XspI CTAG 1 cut(s) 347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.