Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G50915 AT5G50915 AT5G50915 AT5G50915 |
| fragaria_vesca | FvH4_5g09140 FvH4_5g09140 |
| malus_domestica | MD06G1133200.v1.1 MD14G1149600.v1.1 |
| prunus_persica | Prupe.5G144400_v2.0.a1 |
| pyrus_communis | pycom06g12480 pycom14g12420 |
| rosa_chinensis | RchiOBHm_Chr7g0189021 |
| rosa_laevigata | RLG00000004638 |
| rosa_roxburghii | Rroxscaffold_3G00265840 |
| rosa_rugosa | Rorug06G0495700 |
| rosa_samantha | Rh7AG100200 Rh7BG102700 Rh7CG104100 Rh7DG102200 |
| rosa_wichuraiana | Rw7G008660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 268 |
| AccB1I | GGYRCC | 1 cut(s) | 401 |
| AclWI | GGATC | 3 cut(s) | 112, 337, 990 |
| AcsI | RAATTY | 1 cut(s) | 340 |
| AfaI | GTAC | 1 cut(s) | 166 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 476, 970 |
| AgsI | TTSAA | 8 cut(s) | 144, 155, 266, 340, 363, 909, 920, 1031 |
| AjnI | CCWGG | 3 cut(s) | 120, 447, 592 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 848, 880, 928, 960 |
| AluBI | AGCT | 8 cut(s) | 149, 162, 180, 262, 413, 691, 875, 905 |
| AluI | AGCT | 8 cut(s) | 149, 162, 180, 262, 413, 691, 875, 905 |
| Alw21I | GWGCWC | 2 cut(s) | 236, 372 |
| AlwI | GGATC | 3 cut(s) | 112, 337, 990 |
| AoxI | GGCC | 1 cut(s) | 932 |
| ApeKI | GCWGC | 4 cut(s) | 5, 159, 577, 804 |
| ApoI | RAATTY | 1 cut(s) | 340 |
| AseI | ATTAAT | 1 cut(s) | 1034 |
| AsuC2I | CCSGG | 1 cut(s) | 893 |
| AsuHPI | GGTGA | 3 cut(s) | 284, 771, 841 |
| BanI | GGYRCC | 1 cut(s) | 401 |
| Bbv12I | GWGCWC | 2 cut(s) | 236, 372 |
| BbvI | GCAGC | 4 cut(s) | 17, 171, 564, 816 |
| BccI | CCATC | 5 cut(s) | 103, 392, 739, 796, 1015 |
| BciT130I | CCWGG | 3 cut(s) | 122, 449, 594 |
| BclI | TGATCA | 1 cut(s) | 172 |
| BcnI | CCSGG | 1 cut(s) | 893 |
| BfuAI | ACCTGC | 1 cut(s) | 268 |
| BisI | GCNGC | 4 cut(s) | 6, 160, 578, 805 |
| BlpI | GCTNAGC | 1 cut(s) | 181 |
| BlsI | GCNGC | 4 cut(s) | 7, 161, 579, 806 |
| Bme1390I | CCNGG | 4 cut(s) | 122, 449, 594, 893 |
| BmiI | GGNNCC | 1 cut(s) | 403 |
| BmrFI | CCNGG | 4 cut(s) | 122, 449, 594, 893 |
| BmsI | GCATC | 3 cut(s) | 564, 615, 785 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 665, 697 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 181 |
| BpuMI | CCSGG | 1 cut(s) | 893 |
| BsaJI | CCNNGG | 1 cut(s) | 354 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 476, 970 |
| Bse1I | ACTGG | 3 cut(s) | 274, 616, 652 |
| BseBI | CCWGG | 3 cut(s) | 122, 449, 594 |
| BseDI | CCNNGG | 1 cut(s) | 354 |
| BseGI | GGATG | 4 cut(s) | 403, 573, 637, 979 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 476, 970 |
| BseMII | CTCAG | 5 cut(s) | 99, 195, 211, 299, 962 |
| BseNI | ACTGG | 3 cut(s) | 274, 616, 652 |
| BseXI | GCAGC | 4 cut(s) | 17, 171, 564, 816 |
| BseYI | CCCAGC | 1 cut(s) | 413 |
| BshFI | GGCC | 1 cut(s) | 934 |
| BshNI | GGYRCC | 1 cut(s) | 401 |
| BsiHKAI | GWGCWC | 2 cut(s) | 236, 372 |
| BsiSI | CCGG | 1 cut(s) | 893 |
| BslFI | GGGAC | 1 cut(s) | 640 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 476, 970 |
| BsmFI | GGGAC | 1 cut(s) | 640 |
| BsnI | GGCC | 1 cut(s) | 934 |
| Bsp1286I | GDGCHC | 2 cut(s) | 236, 372 |
| Bsp143I | GATC | 4 cut(s) | 117, 172, 329, 982 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 181 |
| BspANI | GGCC | 1 cut(s) | 934 |
| BspCNI | CTCAG | 5 cut(s) | 100, 194, 210, 298, 961 |
| BspLI | GGNNCC | 1 cut(s) | 403 |
| BspMI | ACCTGC | 1 cut(s) | 268 |
| BspPI | GGATC | 3 cut(s) | 112, 337, 990 |
| BspT107I | GGYRCC | 1 cut(s) | 401 |
| BsrI | ACTGG | 3 cut(s) | 274, 616, 652 |
| BssECI | CCNNGG | 1 cut(s) | 354 |
| BssMI | GATC | 4 cut(s) | 117, 172, 329, 982 |
| BssT1I | CCWWGG | 1 cut(s) | 354 |
| Bst2UI | CCWGG | 3 cut(s) | 122, 449, 594 |
| Bst4CI | ACNGT | 4 cut(s) | 169, 250, 899, 956 |
| Bst6I | CTCTTC | 2 cut(s) | 305, 541 |
| BstC8I | GCNNGC | 1 cut(s) | 693 |
| BstDEI | CTNAG | 5 cut(s) | 108, 181, 197, 285, 948 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 474 |
| BstF5I | GGATG | 4 cut(s) | 403, 573, 637, 979 |
| BstKTI | GATC | 4 cut(s) | 120, 175, 332, 985 |
| BstMBI | GATC | 4 cut(s) | 117, 172, 329, 982 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 410 |
| BstNI | CCWGG | 3 cut(s) | 122, 449, 594 |
| BstSCI | CCNGG | 4 cut(s) | 120, 447, 592, 891 |
| BstV1I | GCAGC | 4 cut(s) | 17, 171, 564, 816 |
| BsuRI | GGCC | 1 cut(s) | 934 |
| BtsCI | GGATG | 4 cut(s) | 403, 573, 637, 979 |
| BtsI | GCAGTG | 1 cut(s) | 627 |
| BtsIMutI | CAGTG | 5 cut(s) | 205, 565, 609, 627, 961 |
| BveI | ACCTGC | 1 cut(s) | 268 |
| Cac8I | GCNNGC | 1 cut(s) | 693 |
| CsiI | ACCWGGT | 1 cut(s) | 447 |
| Csp6I | GTAC | 1 cut(s) | 165 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 234, 269, 808, 843 |
| CviAII | CATG | 2 cut(s) | 488, 772 |
| CviQI | GTAC | 1 cut(s) | 165 |
| DdeI | CTNAG | 5 cut(s) | 108, 181, 197, 285, 948 |
| DpnI | GATC | 4 cut(s) | 119, 174, 331, 984 |
| DpnII | GATC | 4 cut(s) | 117, 172, 329, 982 |
| Eam1104I | CTCTTC | 2 cut(s) | 305, 541 |
| EarI | CTCTTC | 2 cut(s) | 305, 541 |
| Eco130I | CCWWGG | 1 cut(s) | 354 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 474 |
| EcoRI | GAATTC | 1 cut(s) | 340 |
| EcoRII | CCWGG | 3 cut(s) | 120, 447, 592 |
| EcoT14I | CCWWGG | 1 cut(s) | 354 |
| ErhI | CCWWGG | 1 cut(s) | 354 |
| FaeI | CATG | 2 cut(s) | 491, 775 |
| FaiI | YATR | 9 cut(s) | 16, 132, 302, 489, 648, 717, 773, 784, 1039 |
| FaqI | GGGAC | 1 cut(s) | 640 |
| FatI | CATG | 2 cut(s) | 487, 771 |
| FbaI | TGATCA | 1 cut(s) | 172 |
| Fnu4HI | GCNGC | 4 cut(s) | 6, 160, 578, 805 |
| FokI | GGATG | 4 cut(s) | 410, 580, 644, 986 |
| Fsp4HI | GCNGC | 4 cut(s) | 6, 160, 578, 805 |
| GluI | GCNGC | 4 cut(s) | 6, 160, 578, 805 |
| GsaI | CCCAGC | 1 cut(s) | 417 |
| HaeIII | GGCC | 1 cut(s) | 934 |
| HapII | CCGG | 1 cut(s) | 893 |
| Hin1II | CATG | 2 cut(s) | 491, 775 |
| HindIII | AAGCTT | 2 cut(s) | 260, 689 |
| HinfI | GANTC | 3 cut(s) | 38, 140, 239 |
| HpaII | CCGG | 1 cut(s) | 893 |
| HphI | GGTGA | 3 cut(s) | 284, 771, 841 |
| Hpy166II | GTNNAC | 1 cut(s) | 703 |
| Hpy188I | TCNGA | 3 cut(s) | 109, 288, 436 |
| Hpy188III | TCNNGA | 3 cut(s) | 144, 363, 950 |
| Hpy8I | GTNNAC | 1 cut(s) | 703 |
| HpyAV | CCTTC | 5 cut(s) | 114, 222, 418, 609, 874 |
| HpyCH4III | ACNGT | 4 cut(s) | 169, 250, 899, 956 |
| HpyCH4V | TGCA | 3 cut(s) | 533, 580, 804 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 410 |
| HpyF3I | CTNAG | 5 cut(s) | 108, 181, 197, 285, 948 |
| Hsp92II | CATG | 2 cut(s) | 491, 775 |
| Ksp22I | TGATCA | 1 cut(s) | 172 |
| Kzo9I | GATC | 4 cut(s) | 117, 172, 329, 982 |
| Lsp1109I | GCAGC | 4 cut(s) | 17, 171, 564, 816 |
| LweI | GCATC | 3 cut(s) | 564, 615, 785 |
| MabI | ACCWGGT | 1 cut(s) | 447 |
| MaeIII | GTNAC | 7 cut(s) | 200, 217, 280, 292, 479, 599, 607 |
| MalI | GATC | 4 cut(s) | 119, 174, 331, 984 |
| MboI | GATC | 4 cut(s) | 117, 172, 329, 982 |
| MboII | GAAGA | 3 cut(s) | 322, 558, 583 |
| MhlI | GDGCHC | 2 cut(s) | 236, 372 |
| MluCI | AATT | 7 cut(s) | 42, 340, 392, 636, 643, 909, 1031 |
| MlyI | GAGTC | 2 cut(s) | 32, 248 |
| MmeI | TCCRAC | 2 cut(s) | 439, 497 |
| MnlI | CCTC | 8 cut(s) | 253, 480, 495, 531, 558, 689, 924, 973 |
| MseI | TTAA | 1 cut(s) | 1034 |
| MspA1I | CMGCKG | 1 cut(s) | 162 |
| MspI | CCGG | 1 cut(s) | 893 |
| MspR9I | CCNGG | 4 cut(s) | 122, 449, 594, 893 |
| MvaI | CCWGG | 3 cut(s) | 122, 449, 594 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 410 |
| NciI | CCSGG | 1 cut(s) | 893 |
| NdeII | GATC | 4 cut(s) | 117, 172, 329, 982 |
| NlaIII | CATG | 2 cut(s) | 491, 775 |
| NlaIV | GGNNCC | 1 cut(s) | 403 |
| NmeAIII | GCCGAG | 1 cut(s) | 430 |
| NmuCI | GTSAC | 6 cut(s) | 200, 217, 280, 292, 599, 607 |
| PfeI | GAWTC | 1 cut(s) | 140 |
| PflFI | GACNNNGTC | 2 cut(s) | 449, 605 |
| PfoI | TCCNGGA | 2 cut(s) | 120, 891 |
| PkrI | GCNGC | 4 cut(s) | 7, 161, 579, 806 |
| PleI | GAGTC | 2 cut(s) | 32, 247 |
| PpsI | GAGTC | 2 cut(s) | 32, 247 |
| PshBI | ATTAAT | 1 cut(s) | 1034 |
| Psp6I | CCWGG | 3 cut(s) | 120, 447, 592 |
| PspFI | CCCAGC | 1 cut(s) | 413 |
| PspGI | CCWGG | 3 cut(s) | 120, 447, 592 |
| PspN4I | GGNNCC | 1 cut(s) | 403 |
| PsyI | GACNNNGTC | 2 cut(s) | 449, 605 |
| PvuII | CAGCTG | 1 cut(s) | 162 |
| RsaI | GTAC | 1 cut(s) | 166 |
| RsaNI | GTAC | 1 cut(s) | 165 |
| SaqAI | TTAA | 1 cut(s) | 1034 |
| SatI | GCNGC | 4 cut(s) | 6, 160, 578, 805 |
| Sau3AI | GATC | 4 cut(s) | 117, 172, 329, 982 |
| SchI | GAGTC | 2 cut(s) | 32, 248 |
| ScrFI | CCNGG | 4 cut(s) | 122, 449, 594, 893 |
| SduI | GDGCHC | 2 cut(s) | 236, 372 |
| SexAI | ACCWGGT | 1 cut(s) | 447 |
| SfaNI | GCATC | 3 cut(s) | 564, 615, 785 |
| Sse9I | AATT | 7 cut(s) | 42, 340, 392, 636, 643, 909, 1031 |
| StyD4I | CCNGG | 4 cut(s) | 120, 447, 592, 891 |
| StyI | CCWWGG | 1 cut(s) | 354 |
| TaaI | ACNGT | 4 cut(s) | 169, 250, 899, 956 |
| TasI | AATT | 7 cut(s) | 42, 340, 392, 636, 643, 909, 1031 |
| TatI | WGTACW | 1 cut(s) | 164 |
| TfiI | GAWTC | 1 cut(s) | 140 |
| Tru1I | TTAA | 1 cut(s) | 1034 |
| Tru9I | TTAA | 1 cut(s) | 1034 |
| TscAI | CASTG | 5 cut(s) | 205, 565, 616, 627, 961 |
| TseFI | GTSAC | 6 cut(s) | 200, 217, 280, 292, 599, 607 |
| TseI | GCWGC | 4 cut(s) | 5, 159, 577, 804 |
| Tsp45I | GTSAC | 6 cut(s) | 200, 217, 280, 292, 599, 607 |
| TspDTI | ATGAA | 6 cut(s) | 119, 476, 480, 584, 648, 701 |
| TspRI | CASTG | 5 cut(s) | 205, 565, 616, 627, 961 |
| Tth111I | GACNNNGTC | 2 cut(s) | 449, 605 |
| VspI | ATTAAT | 1 cut(s) | 1034 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 474 |
| XapI | RAATTY | 1 cut(s) | 340 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 455 |