Belongs to the DEAD box helicase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G63120 AT5G63120 AT5G63120 AT5G63120 AT5G63120 |
| fragaria_vesca | FvH4_5g06110 FvH4_5g06110 FvH4_5g06110 FvH4_5g06110 FvH4_5g06110 FvH4_5g06110 |
| malus_domestica | MD06G1166600.v1.1 MD14G1172300.v1.1 |
| prunus_persica | Prupe.5G166600_v2.0.a1 Prupe.5G166600_v2.0.a1 Prupe.5G166600_v2.0.a1 |
| pyrus_communis | pycom06g14930 pycom14g14390 |
| rosa_chinensis | RchiOBHm_Chr7g0192711 |
| rosa_laevigata | RLG00000004335 |
| rosa_multiflora | Rmu_sc0002040.1_g000012 |
| rosa_roxburghii | Rroxscaffold_3G00262730 |
| rosa_rugosa | Rorug07G0004000 Rorug07G0004100 |
| rosa_samantha | Rh7CG133900 Rh7DG131300 |
| rosa_wichuraiana | Rw7G011040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1665 |
| AatII | GACGTC | 1 cut(s) | 33 |
| Acc36I | ACCTGC | 1 cut(s) | 1748 |
| Acc65I | GGTACC | 2 cut(s) | 213, 529 |
| AccB1I | GGYRCC | 2 cut(s) | 213, 529 |
| AccI | GTMKAC | 1 cut(s) | 460 |
| AccII | CGCG | 3 cut(s) | 405, 1576, 1712 |
| AclWI | GGATC | 3 cut(s) | 1020, 1291, 1738 |
| AcoI | YGGCCR | 5 cut(s) | 109, 749, 1051, 1220, 1466 |
| AcsI | RAATTY | 7 cut(s) | 544, 673, 921, 941, 1087, 1398, 1721 |
| AcyI | GRCGYC | 1 cut(s) | 30 |
| AfaI | GTAC | 4 cut(s) | 5, 215, 531, 970 |
| AgeI | ACCGGT | 2 cut(s) | 184, 191 |
| AgsI | TTSAA | 8 cut(s) | 247, 722, 920, 926, 939, 1235, 1328, 1881 |
| AjnI | CCWGG | 4 cut(s) | 196, 865, 1048, 1497 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1371, 1403 |
| AleI | CACNNNNGTG | 1 cut(s) | 1565 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1861, 1893 |
| AluBI | AGCT | 6 cut(s) | 390, 525, 561, 830, 1043, 1472 |
| AluI | AGCT | 6 cut(s) | 390, 525, 561, 830, 1043, 1472 |
| Alw21I | GWGCWC | 3 cut(s) | 392, 563, 991 |
| Alw26I | GTCTC | 5 cut(s) | 195, 477, 785, 1409, 1900 |
| AlwI | GGATC | 3 cut(s) | 1020, 1291, 1738 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 77, 1688 |
| Ama87I | CYCGRG | 1 cut(s) | 903 |
| ApaI | GGGCCC | 2 cut(s) | 101, 143 |
| ApeKI | GCWGC | 4 cut(s) | 125, 823, 1571, 1784 |
| ApoI | RAATTY | 7 cut(s) | 544, 673, 921, 941, 1087, 1398, 1721 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1130, 1162 |
| AsiGI | ACCGGT | 2 cut(s) | 184, 191 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 545 |
| Asp718I | GGTACC | 2 cut(s) | 213, 529 |
| AspLEI | GCGC | 4 cut(s) | 51, 76, 848, 1576 |
| AsuC2I | CCSGG | 1 cut(s) | 1795 |
| AsuHPI | GGTGA | 4 cut(s) | 580, 881, 1499, 1780 |
| AvaI | CYCGRG | 1 cut(s) | 903 |
| AvaII | GGWCC | 5 cut(s) | 68, 182, 194, 875, 998 |
| BaeGI | GKGCMC | 2 cut(s) | 101, 143 |
| BalI | TGGCCA | 3 cut(s) | 751, 1222, 1468 |
| BanI | GGYRCC | 2 cut(s) | 213, 529 |
| BanII | GRGCYC | 5 cut(s) | 101, 143, 392, 563, 1775 |
| Bbv12I | GWGCWC | 3 cut(s) | 392, 563, 991 |
| BbvI | GCAGC | 4 cut(s) | 137, 810, 1558, 1771 |
| BccI | CCATC | 7 cut(s) | 356, 741, 1334, 1450, 1454, 1458, 1633 |
| BceAI | ACGGC | 3 cut(s) | 96, 306, 354 |
| BciT130I | CCWGG | 4 cut(s) | 198, 867, 1050, 1499 |
| BclI | TGATCA | 2 cut(s) | 1362, 1608 |
| BcnI | CCSGG | 1 cut(s) | 1795 |
| BcoDI | GTCTC | 5 cut(s) | 195, 477, 785, 1409, 1900 |
| BfaI | CTAG | 4 cut(s) | 887, 1109, 1634, 1728 |
| BfoI | RGCGCY | 2 cut(s) | 52, 77 |
| BfuAI | ACCTGC | 1 cut(s) | 1748 |
| BisI | GCNGC | 5 cut(s) | 126, 403, 824, 1572, 1785 |
| BlsI | GCNGC | 5 cut(s) | 127, 404, 825, 1573, 1786 |
| BmcAI | AGTACT | 1 cut(s) | 970 |
| Bme1390I | CCNGG | 5 cut(s) | 198, 867, 1050, 1499, 1795 |
| Bme18I | GGWCC | 5 cut(s) | 68, 182, 194, 875, 998 |
| BmeT110I | CYCGRG | 1 cut(s) | 903 |
| BmrFI | CCNGG | 5 cut(s) | 198, 867, 1050, 1499, 1795 |
| BmrI | ACTGGG | 1 cut(s) | 1522 |
| BmsI | GCATC | 2 cut(s) | 658, 685 |
| BmuI | ACTGGG | 1 cut(s) | 1522 |
| BpmI | CTGGAG | 1 cut(s) | 1842 |
| BpuEI | CTTGAG | 1 cut(s) | 726 |
| BpuMI | CCSGG | 1 cut(s) | 1795 |
| BsaAI | YACGTR | 1 cut(s) | 1259 |
| BsaHI | GRCGYC | 1 cut(s) | 30 |
| BsaI | GGTCTC | 1 cut(s) | 1900 |
| BsaJI | CCNNGG | 8 cut(s) | 112, 322, 370, 403, 854, 1223, 1846, 1910 |
| BsaWI | WCCGGW | 3 cut(s) | 151, 184, 191 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 20, 50, 265, 295 |
| Bse118I | RCCGGY | 2 cut(s) | 184, 191 |
| Bse1I | ACTGG | 3 cut(s) | 799, 1517, 1669 |
| Bse3DI | GCAATG | 2 cut(s) | 582, 1794 |
| BseBI | CCWGG | 4 cut(s) | 198, 867, 1050, 1499 |
| BseDI | CCNNGG | 8 cut(s) | 112, 322, 370, 403, 854, 1223, 1846, 1910 |
| BseGI | GGATG | 8 cut(s) | 673, 752, 1123, 1137, 1433, 1461, 1465, 1469 |
| BseMI | GCAATG | 2 cut(s) | 582, 1794 |
| BseMII | CTCAG | 2 cut(s) | 1169, 1515 |
| BseNI | ACTGG | 3 cut(s) | 799, 1517, 1669 |
| BseRI | GAGGAG | 5 cut(s) | 465, 468, 495, 1863, 1866 |
| BseSI | GKGCMC | 2 cut(s) | 101, 143 |
| BseXI | GCAGC | 4 cut(s) | 137, 810, 1558, 1771 |
| BsgI | GTGCAG | 1 cut(s) | 1692 |
| Bsh1236I | CGCG | 3 cut(s) | 405, 1576, 1712 |
| Bsh1285I | CGRYCG | 1 cut(s) | 156 |
| BshNI | GGYRCC | 2 cut(s) | 213, 529 |
| BshTI | ACCGGT | 2 cut(s) | 184, 191 |
| BsiEI | CGRYCG | 1 cut(s) | 156 |
| BsiHKAI | GWGCWC | 3 cut(s) | 392, 563, 991 |
| BsiHKCI | CYCGRG | 1 cut(s) | 903 |
| BsiSI | CCGG | 5 cut(s) | 152, 180, 185, 192, 1795 |
| BslFI | GGGAC | 2 cut(s) | 1523, 1777 |
| BsmAI | GTCTC | 5 cut(s) | 195, 477, 785, 1409, 1900 |
| BsmBI | CGTCTC | 1 cut(s) | 1409 |
| BsmFI | GGGAC | 2 cut(s) | 1523, 1777 |
| BsmI | GAATGC | 1 cut(s) | 1720 |
| Bso31I | GGTCTC | 1 cut(s) | 1900 |
| BsoBI | CYCGRG | 1 cut(s) | 903 |
| Bsp120I | GGGCCC | 2 cut(s) | 97, 139 |
| Bsp1286I | GDGCHC | 6 cut(s) | 101, 143, 392, 563, 991, 1775 |
| Bsp143I | GATC | 6 cut(s) | 1012, 1189, 1283, 1362, 1608, 1743 |
| Bsp19I | CCATGG | 1 cut(s) | 1910 |
| BspCNI | CTCAG | 2 cut(s) | 1168, 1516 |
| BspFNI | CGCG | 3 cut(s) | 405, 1576, 1712 |
| BspMI | ACCTGC | 1 cut(s) | 1748 |
| BspPI | GGATC | 3 cut(s) | 1020, 1291, 1738 |
| BspQI | GCTCTTC | 1 cut(s) | 568 |
| BspT107I | GGYRCC | 2 cut(s) | 213, 529 |
| BspTNI | GGTCTC | 1 cut(s) | 1900 |
| BsrDI | GCAATG | 2 cut(s) | 582, 1794 |
| BsrFI | RCCGGY | 2 cut(s) | 184, 191 |
| BsrI | ACTGG | 3 cut(s) | 799, 1517, 1669 |
| BssAI | RCCGGY | 2 cut(s) | 184, 191 |
| BssECI | CCNNGG | 8 cut(s) | 112, 322, 370, 403, 854, 1223, 1846, 1910 |
| BssMI | GATC | 6 cut(s) | 1012, 1189, 1283, 1362, 1608, 1743 |
| BssNI | GRCGYC | 1 cut(s) | 30 |
| BssT1I | CCWWGG | 2 cut(s) | 1223, 1910 |
| Bst2UI | CCWGG | 4 cut(s) | 198, 867, 1050, 1499 |
| Bst4CI | ACNGT | 4 cut(s) | 44, 625, 1487, 1888 |
| Bst6I | CTCTTC | 3 cut(s) | 442, 568, 1090 |
| BstACI | GRCGYC | 1 cut(s) | 30 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1784 |
| BstBAI | YACGTR | 1 cut(s) | 1259 |
| BstC8I | GCNNGC | 6 cut(s) | 78, 93, 97, 139, 828, 1470 |
| BstDEI | CTNAG | 3 cut(s) | 1155, 1443, 1524 |
| BstDSI | CCRYGG | 5 cut(s) | 112, 322, 370, 403, 1910 |
| BstEII | GGTNACC | 1 cut(s) | 187 |
| BstF5I | GGATG | 8 cut(s) | 673, 752, 1123, 1137, 1433, 1461, 1465, 1469 |
| BstFNI | CGCG | 3 cut(s) | 405, 1576, 1712 |
| BstH2I | RGCGCY | 2 cut(s) | 52, 77 |
| BstHHI | GCGC | 4 cut(s) | 51, 76, 848, 1576 |
| BstKTI | GATC | 6 cut(s) | 1015, 1192, 1286, 1365, 1611, 1746 |
| BstMAI | GTCTC | 5 cut(s) | 195, 477, 785, 1409, 1900 |
| BstMBI | GATC | 6 cut(s) | 1012, 1189, 1283, 1362, 1608, 1743 |
| BstMCI | CGRYCG | 1 cut(s) | 156 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 92, 101, 134, 387, 508, 1724, 1784, 1842 |
| BstNI | CCWGG | 4 cut(s) | 198, 867, 1050, 1499 |
| BstPI | GGTNACC | 1 cut(s) | 187 |
| BstSCI | CCNGG | 5 cut(s) | 196, 865, 1048, 1497, 1793 |
| BstSLI | GKGCMC | 2 cut(s) | 101, 143 |
| BstSNI | TACGTA | 1 cut(s) | 1259 |
| BstUI | CGCG | 3 cut(s) | 405, 1576, 1712 |
| BstV1I | GCAGC | 4 cut(s) | 137, 810, 1558, 1771 |
| BstX2I | RGATCY | 2 cut(s) | 1012, 1743 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1567, 1655 |
| BstYI | RGATCY | 2 cut(s) | 1012, 1743 |
| BtgI | CCRYGG | 5 cut(s) | 112, 322, 370, 403, 1910 |
| BtsCI | GGATG | 8 cut(s) | 673, 752, 1123, 1137, 1433, 1461, 1465, 1469 |
| BtsIMutI | CAGTG | 1 cut(s) | 1560 |
| BveI | ACCTGC | 1 cut(s) | 1748 |
| Cac8I | GCNNGC | 6 cut(s) | 78, 93, 97, 139, 828, 1470 |
| CaiI | CAGNNNCTG | 2 cut(s) | 77, 1688 |
| CfoI | GCGC | 4 cut(s) | 51, 76, 848, 1576 |
| Cfr10I | RCCGGY | 2 cut(s) | 184, 191 |
| Cfr42I | CCGCGG | 1 cut(s) | 406 |
| CpoI | CGGWCCG | 1 cut(s) | 182 |
| Csp6I | GTAC | 4 cut(s) | 4, 214, 530, 969 |
| CspAI | ACCGGT | 2 cut(s) | 184, 191 |
| CspI | CGGWCCG | 1 cut(s) | 182 |
| CviAII | CATG | 4 cut(s) | 635, 1141, 1218, 1911 |
| CviQI | GTAC | 4 cut(s) | 4, 214, 530, 969 |
| DdeI | CTNAG | 3 cut(s) | 1155, 1443, 1524 |
| DpnI | GATC | 6 cut(s) | 1014, 1191, 1285, 1364, 1610, 1745 |
| DpnII | GATC | 6 cut(s) | 1012, 1189, 1283, 1362, 1608, 1743 |
| DraI | TTTAAA | 1 cut(s) | 1531 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1665 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1665 |
| EaeI | YGGCCR | 5 cut(s) | 109, 749, 1051, 1220, 1466 |
| Eam1104I | CTCTTC | 3 cut(s) | 442, 568, 1090 |
| EarI | CTCTTC | 3 cut(s) | 442, 568, 1090 |
| EciI | GGCGGA | 1 cut(s) | 78 |
| Ecl136II | GAGCTC | 2 cut(s) | 390, 561 |
| Eco105I | TACGTA | 1 cut(s) | 1259 |
| Eco130I | CCWWGG | 2 cut(s) | 1223, 1910 |
| Eco24I | GRGCYC | 5 cut(s) | 101, 143, 392, 563, 1775 |
| Eco31I | GGTCTC | 1 cut(s) | 1900 |
| Eco32I | GATATC | 1 cut(s) | 640 |
| Eco47I | GGWCC | 5 cut(s) | 68, 182, 194, 875, 998 |
| Eco53kI | GAGCTC | 2 cut(s) | 390, 561 |
| Eco88I | CYCGRG | 1 cut(s) | 903 |
| Eco91I | GGTNACC | 1 cut(s) | 187 |
| EcoICRI | GAGCTC | 2 cut(s) | 390, 561 |
| EcoO109I | RGGNCCY | 3 cut(s) | 98, 875, 998 |
| EcoO65I | GGTNACC | 1 cut(s) | 187 |
| EcoRI | GAATTC | 1 cut(s) | 1398 |
| EcoRII | CCWGG | 4 cut(s) | 196, 865, 1048, 1497 |
| EcoRV | GATATC | 1 cut(s) | 640 |
| EcoT14I | CCWWGG | 2 cut(s) | 1223, 1910 |
| EcoT38I | GRGCYC | 5 cut(s) | 101, 143, 392, 563, 1775 |
| ErhI | CCWWGG | 2 cut(s) | 1223, 1910 |
| Esp3I | CGTCTC | 1 cut(s) | 1409 |
| FaeI | CATG | 4 cut(s) | 638, 1144, 1221, 1914 |
| FaqI | GGGAC | 2 cut(s) | 1523, 1777 |
| FatI | CATG | 4 cut(s) | 634, 1140, 1217, 1910 |
| FauI | CCCGC | 7 cut(s) | 88, 109, 130, 409, 606, 1569, 1783 |
| FbaI | TGATCA | 2 cut(s) | 1362, 1608 |
| FblI | GTMKAC | 1 cut(s) | 460 |
| Fnu4HI | GCNGC | 5 cut(s) | 126, 403, 824, 1572, 1785 |
| FokI | GGATG | 8 cut(s) | 680, 759, 1130, 1144, 1440, 1468, 1472, 1476 |
| FriOI | GRGCYC | 5 cut(s) | 101, 143, 392, 563, 1775 |
| Fsp4HI | GCNGC | 5 cut(s) | 126, 403, 824, 1572, 1785 |
| FspBI | CTAG | 4 cut(s) | 887, 1109, 1634, 1728 |
| GlaI | GCGC | 4 cut(s) | 50, 75, 847, 1575 |
| GluI | GCNGC | 5 cut(s) | 126, 403, 824, 1572, 1785 |
| GsuI | CTGGAG | 1 cut(s) | 1842 |
| HaeII | RGCGCY | 2 cut(s) | 52, 77 |
| HapII | CCGG | 5 cut(s) | 152, 180, 185, 192, 1795 |
| HhaI | GCGC | 4 cut(s) | 51, 76, 848, 1576 |
| Hin1I | GRCGYC | 1 cut(s) | 30 |
| Hin1II | CATG | 4 cut(s) | 638, 1144, 1221, 1914 |
| Hin6I | GCGC | 4 cut(s) | 49, 74, 846, 1574 |
| HinP1I | GCGC | 4 cut(s) | 49, 74, 846, 1574 |
| HincII | GTYRAC | 1 cut(s) | 34 |
| HindII | GTYRAC | 1 cut(s) | 34 |
| HinfI | GANTC | 4 cut(s) | 652, 932, 1543, 1864 |
| HpaII | CCGG | 5 cut(s) | 152, 180, 185, 192, 1795 |
| HphI | GGTGA | 4 cut(s) | 580, 881, 1499, 1780 |
| Hpy166II | GTNNAC | 3 cut(s) | 34, 461, 1648 |
| Hpy188I | TCNGA | 7 cut(s) | 583, 657, 1158, 1339, 1404, 1814, 1869 |
| Hpy188III | TCNNGA | 9 cut(s) | 168, 393, 477, 905, 926, 1414, 1583, 1741, 1821 |
| Hpy8I | GTNNAC | 3 cut(s) | 34, 461, 1648 |
| Hpy99I | CGWCG | 3 cut(s) | 32, 223, 629 |
| HpyAV | CCTTC | 6 cut(s) | 243, 309, 623, 866, 1533, 1585 |
| HpyCH4III | ACNGT | 4 cut(s) | 44, 625, 1487, 1888 |
| HpyCH4IV | ACGT | 4 cut(s) | 30, 221, 952, 1258 |
| HpyCH4V | TGCA | 6 cut(s) | 704, 838, 975, 1673, 1750, 1787 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 92, 101, 134, 387, 508, 1724, 1784, 1842 |
| HpyF3I | CTNAG | 3 cut(s) | 1155, 1443, 1524 |
| HpySE526I | ACGT | 4 cut(s) | 30, 221, 952, 1258 |
| Hsp92I | GRCGYC | 1 cut(s) | 30 |
| Hsp92II | CATG | 4 cut(s) | 638, 1144, 1221, 1914 |
| HspAI | GCGC | 4 cut(s) | 49, 74, 846, 1574 |
| KpnI | GGTACC | 2 cut(s) | 217, 533 |
| Ksp22I | TGATCA | 2 cut(s) | 1362, 1608 |
| KspI | CCGCGG | 1 cut(s) | 406 |
| Kzo9I | GATC | 6 cut(s) | 1012, 1189, 1283, 1362, 1608, 1743 |
| LguI | GCTCTTC | 1 cut(s) | 568 |
| LmnI | GCTCC | 5 cut(s) | 91, 387, 522, 994, 1392 |
| Lsp1109I | GCAGC | 4 cut(s) | 137, 810, 1558, 1771 |
| LweI | GCATC | 2 cut(s) | 658, 685 |
| MaeI | CTAG | 4 cut(s) | 887, 1109, 1634, 1728 |
| MaeII | ACGT | 4 cut(s) | 30, 221, 952, 1258 |
| MaeIII | GTNAC | 7 cut(s) | 56, 187, 1099, 1259, 1430, 1438, 1898 |
| MalI | GATC | 6 cut(s) | 1014, 1191, 1285, 1364, 1610, 1745 |
| MboI | GATC | 6 cut(s) | 1012, 1189, 1283, 1362, 1608, 1743 |
| MboII | GAAGA | 6 cut(s) | 459, 553, 555, 927, 941, 1107 |
| MfeI | CAATTG | 1 cut(s) | 1448 |
| MflI | RGATCY | 2 cut(s) | 1012, 1743 |
| MhlI | GDGCHC | 6 cut(s) | 101, 143, 392, 563, 991, 1775 |
| MlsI | TGGCCA | 3 cut(s) | 751, 1222, 1468 |
| MluNI | TGGCCA | 3 cut(s) | 751, 1222, 1468 |
| MmeI | TCCRAC | 3 cut(s) | 760, 1050, 1116 |
| Mox20I | TGGCCA | 3 cut(s) | 751, 1222, 1468 |
| MroXI | GAANNNNTTC | 1 cut(s) | 545 |
| MscI | TGGCCA | 3 cut(s) | 751, 1222, 1468 |
| MseI | TTAA | 6 cut(s) | 207, 761, 1017, 1296, 1530, 1694 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1565, 1713 |
| Msp20I | TGGCCA | 3 cut(s) | 751, 1222, 1468 |
| MspA1I | CMGCKG | 2 cut(s) | 95, 405 |
| MspI | CCGG | 5 cut(s) | 152, 180, 185, 192, 1795 |
| MspR9I | CCNGG | 5 cut(s) | 198, 867, 1050, 1499, 1795 |
| MunI | CAATTG | 1 cut(s) | 1448 |
| Mva1269I | GAATGC | 1 cut(s) | 1720 |
| MvaI | CCWGG | 4 cut(s) | 198, 867, 1050, 1499 |
| MvnI | CGCG | 3 cut(s) | 405, 1576, 1712 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 92, 101, 134, 387, 508, 1724, 1784, 1842 |
| NciI | CCSGG | 1 cut(s) | 1795 |
| NcoI | CCATGG | 1 cut(s) | 1910 |
| NdeII | GATC | 6 cut(s) | 1012, 1189, 1283, 1362, 1608, 1743 |
| NlaIII | CATG | 4 cut(s) | 638, 1144, 1221, 1914 |
| NmeAIII | GCCGAG | 1 cut(s) | 1871 |
| NmuCI | GTSAC | 3 cut(s) | 56, 1099, 1430 |
| OliI | CACNNNNGTG | 1 cut(s) | 1565 |
| PaeR7I | CTCGAG | 1 cut(s) | 903 |
| PciSI | GCTCTTC | 1 cut(s) | 568 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1666 |
| PctI | GAATGC | 1 cut(s) | 1720 |
| PdmI | GAANNNNTTC | 1 cut(s) | 545 |
| PfeI | GAWTC | 4 cut(s) | 652, 932, 1543, 1864 |
| PflFI | GACNNNGTC | 2 cut(s) | 811, 1514 |
| PfoI | TCCNGGA | 1 cut(s) | 196 |
| PinAI | ACCGGT | 2 cut(s) | 184, 191 |
| PkrI | GCNGC | 5 cut(s) | 127, 404, 825, 1573, 1786 |
| Ppu21I | YACGTR | 1 cut(s) | 1259 |
| PpuMI | RGGWCCY | 2 cut(s) | 875, 998 |
| Psp124BI | GAGCTC | 2 cut(s) | 392, 563 |
| Psp5II | RGGWCCY | 2 cut(s) | 875, 998 |
| Psp6I | CCWGG | 4 cut(s) | 196, 865, 1048, 1497 |
| PspEI | GGTNACC | 1 cut(s) | 187 |
| PspGI | CCWGG | 4 cut(s) | 196, 865, 1048, 1497 |
| PspOMI | GGGCCC | 2 cut(s) | 97, 139 |
| PspPPI | RGGWCCY | 2 cut(s) | 875, 998 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 206, 238 |
| PstNI | CAGNNNCTG | 2 cut(s) | 77, 1688 |
| PsuI | RGATCY | 2 cut(s) | 1012, 1743 |
| PsyI | GACNNNGTC | 2 cut(s) | 811, 1514 |
| RsaI | GTAC | 4 cut(s) | 5, 215, 531, 970 |
| RsaNI | GTAC | 4 cut(s) | 4, 214, 530, 969 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1565, 1713 |
| Rsr2I | CGGWCCG | 1 cut(s) | 182 |
| RsrII | CGGWCCG | 1 cut(s) | 182 |
| SacI | GAGCTC | 2 cut(s) | 392, 563 |
| SacII | CCGCGG | 1 cut(s) | 406 |
| SapI | GCTCTTC | 1 cut(s) | 568 |
| SaqAI | TTAA | 6 cut(s) | 207, 761, 1017, 1296, 1530, 1694 |
| SatI | GCNGC | 5 cut(s) | 126, 403, 824, 1572, 1785 |
| Sau3AI | GATC | 6 cut(s) | 1012, 1189, 1283, 1362, 1608, 1743 |
| ScaI | AGTACT | 1 cut(s) | 970 |
| ScrFI | CCNGG | 5 cut(s) | 198, 867, 1050, 1499, 1795 |
| SduI | GDGCHC | 6 cut(s) | 101, 143, 392, 563, 991, 1775 |
| SfaNI | GCATC | 2 cut(s) | 658, 685 |
| Sfr274I | CTCGAG | 1 cut(s) | 903 |
| Sfr303I | CCGCGG | 1 cut(s) | 406 |
| SgrBI | CCGCGG | 1 cut(s) | 406 |
| SinI | GGWCC | 5 cut(s) | 68, 182, 194, 875, 998 |
| SlaI | CTCGAG | 1 cut(s) | 903 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1565, 1713 |
| SmlI | CTYRAG | 2 cut(s) | 741, 903 |
| SmoI | CTYRAG | 2 cut(s) | 741, 903 |
| SnaBI | TACGTA | 1 cut(s) | 1259 |
| SspI | AATATT | 2 cut(s) | 250, 961 |
| SspMI | CTAG | 4 cut(s) | 887, 1109, 1634, 1728 |
| SstI | GAGCTC | 2 cut(s) | 392, 563 |
| StyD4I | CCNGG | 5 cut(s) | 196, 865, 1048, 1497, 1793 |
| StyI | CCWWGG | 2 cut(s) | 1223, 1910 |
| TaaI | ACNGT | 4 cut(s) | 44, 625, 1487, 1888 |
| TaiI | ACGT | 4 cut(s) | 33, 224, 955, 1261 |
| TaqI | TCGA | 3 cut(s) | 627, 904, 1413 |
| TatI | WGTACW | 1 cut(s) | 968 |
| TauI | GCSGC | 1 cut(s) | 405 |
| TfiI | GAWTC | 4 cut(s) | 652, 932, 1543, 1864 |
| Tru1I | TTAA | 6 cut(s) | 207, 761, 1017, 1296, 1530, 1694 |
| Tru9I | TTAA | 6 cut(s) | 207, 761, 1017, 1296, 1530, 1694 |
| TscAI | CASTG | 1 cut(s) | 1567 |
| TseFI | GTSAC | 3 cut(s) | 56, 1099, 1430 |
| TseI | GCWGC | 4 cut(s) | 125, 823, 1571, 1784 |
| Tsp45I | GTSAC | 3 cut(s) | 56, 1099, 1430 |
| TspRI | CASTG | 1 cut(s) | 1567 |
| Tth111I | GACNNNGTC | 2 cut(s) | 811, 1514 |
| VpaK11BI | GGWCC | 5 cut(s) | 68, 182, 194, 875, 998 |
| XapI | RAATTY | 7 cut(s) | 544, 673, 921, 941, 1087, 1398, 1721 |
| XhoI | CTCGAG | 1 cut(s) | 903 |
| XmiI | GTMKAC | 1 cut(s) | 460 |
| XmnI | GAANNNNTTC | 1 cut(s) | 545 |
| XspI | CTAG | 4 cut(s) | 887, 1109, 1634, 1728 |
| ZraI | GACGTC | 1 cut(s) | 31 |
| ZrmI | AGTACT | 1 cut(s) | 970 |