Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0005996

Physical Location & Seq

Genomic Coordinates Forward (+)

10783015 .. 10787572

Gene Structure 4558 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG133900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1479 bp

ATGGGTCCTGCGCCTGCGGCGGCAGCGCCACCGATCTACGGCCGTGGCGGTGGGGTAGCCCCGTACAGGGGCTCAGCGCCTCCGGTGTCTCCTTATGGAGGAGGAGGGGCTGGACCGGTAGGAGCTCCGGGAGATAGGAATGGATACCCTCCTTTCCAGCCCCCGGCGGGTCGGTTCAGTATGGGCCGAGACGGCGGTGGTAGTTTTGGCGGGAGAGCCCGTGGCGGCGGCGGTAGGGGTTTTGATGGATCCCGTGGGGGTGGTAGAAGCTCCGGTTATAGTCGGGGTGGTGGAAGTTCGGGTTACGGGGGCGGGCGTGGAGGCGGTGGTAGACACGGTGGTGGGTCATCAAGAGGTGACTTGGATGGCATTGTTCTTCCCAAGCAGGATTTTGGGAGCTTAGTTCCTTTTGAGAAGAATTTCTACATTGAGAGCCCTTCGGTGAAGGCAATGTCAGAGCATGAAGTTTTGGCGTATCGAGCCAGGAGGGAGATTACGGTTGATGGGCATGATGTCCCGAAGCCAATTCAGACGTTTCGGGATGCAAGTTTCCCTGGTTACTGTCTCGACGTGATTGCCAAGTTGGGTTTTGTTGAACCAACACCAATTCAGGCTCAAGGATGGCCAATGGCACTAAAGGGTAGAGATTTAGTTGGAATTGCAGAGACTGGTTCCGGGAAAACCCTTTCATATCTGCTGCCAGCTCTGGTACATATTAGTGCTCAGCCTCGATTAGCTCAAGGTGATGGTCCTATTGCGTTAGTATTAGCACCTACTCGAGAATTGGCAGTTCAAATTCAAGAAGAAGCTGTAAAATTTTGTTCACAAAATTATATTAGGAGTACTTGCATTTATGGTGGTGCTCCAAAAGGATCCCAAATACGCGATCTTAGAAGAGGGGTTGAGATTGTGATAGCTACACCTGGCAGACTAATAGATATGTTAGAAGCTCAGCACACAAATTTGCGAAGAGTGACTTACCTAGTTTTGGATGAGGCTGATAGGATGTTGGACATGGGATTTGAGCCGCAGATAAGGAAAATTGTATCTCAAACCCGACCAGATCGGCAGACATTGTATTGGAGTGCCACATGGCCAAGGGAGGTCGAATCCTTAGCAAGGCAGTTTTTACGTAACCCCTATAAGGTAATTATTGGATCAGCAAGTTTGAAAGCAAACCAATCCATAAAGCAAGTTGTTGAAGTTGTGTCTGAGTTCGACAAATATAATAGGCTGCTGAAATTGCTAAAAGACTCTATCGTTGGGAGCCGAATTCTGATATTTGTGGAGACGAAAAAGGGTTGTGACCATGTCACTAAGCAATTGAGGATGGATGGATGGCCAGCTCTGTCCATTCATGGTGATAAAAACCAGGCTGAAAGAGATTGGGTCTTGGCTGAGTTTAAAAGTGGCAGATCTCCTATAATGACTGCCACTGATGTGGCTGCACGGGGTCTTGGTAGGATTACTGTATGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003729 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03040 ko05202 ko05205 map03040 map05202 map05205

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

492

Amino Acids

52.62

Weight (kDa)

9.67

Isoelectric Point (pI)

43.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	201 - 371	4.3e-49	DEAD/DEAH box helicase
Helicase_C	PF00271	408 - 486	2.4e-14	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005996)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63120 AT5G63120 AT5G63120 AT5G63120 AT5G63120
fragaria_vesca	FvH4_5g06110 FvH4_5g06110 FvH4_5g06110 FvH4_5g06110 FvH4_5g06110 FvH4_5g06110
malus_domestica	MD06G1166600.v1.1 MD14G1172300.v1.1
prunus_persica	Prupe.5G166600_v2.0.a1 Prupe.5G166600_v2.0.a1 Prupe.5G166600_v2.0.a1
pyrus_communis	pycom06g14930 pycom14g14390
rosa_chinensis	RchiOBHm_Chr7g0192711
rosa_laevigata	RLG00000004335
rosa_multiflora	Rmu_sc0002040.1_g000012
rosa_roxburghii	Rroxscaffold_3G00262730
rosa_rugosa	Rorug07G0004000 Rorug07G0004100
rosa_samantha	Rh7CG133900 Rh7DG131300
rosa_wichuraiana	Rw7G011040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	331
AccII	CGCG	1 cut(s)	885
AclWI	GGATC	5 cut(s)	243, 256, 867, 880, 1165
AcoI	YGGCCR	4 cut(s)	40, 623, 1094, 1340
AcsI	RAATTY	5 cut(s)	418, 795, 815, 961, 1272
AfaI	GTAC	3 cut(s)	65, 711, 844
AgeI	ACCGGT	1 cut(s)	115
AgsI	TTSAA	5 cut(s)	596, 794, 800, 1171, 1202
AjiI	CACGTC	1 cut(s)	571
AjnI	CCWGG	4 cut(s)	482, 553, 922, 1371
AleI	CACNNNNGTG	2 cut(s)	339, 1439
AluBI	AGCT	9 cut(s)	125, 270, 399, 704, 737, 809, 917, 950, 1346
AluI	AGCT	9 cut(s)	125, 270, 399, 704, 737, 809, 917, 950, 1346
Alw21I	GWGCWC	3 cut(s)	127, 724, 865
Alw26I	GTCTC	5 cut(s)	93, 183, 569, 659, 1283
AlwI	GGATC	5 cut(s)	243, 256, 867, 880, 1165
AlwNI	CAGNNNCTG	1 cut(s)	668
Ama87I	CYCGRG	1 cut(s)	777
AoxI	GGCC	5 cut(s)	40, 184, 623, 1094, 1340
ApeKI	GCWGC	4 cut(s)	23, 697, 1234, 1445
ApoI	RAATTY	5 cut(s)	418, 795, 815, 961, 1272
ArsI	GACNNNNNNTTYG	2 cut(s)	1004, 1036
AsiGI	ACCGGT	1 cut(s)	115
Asp700I	GAANNNNTTC	1 cut(s)	419
AspLEI	GCGC	3 cut(s)	13, 28, 79
AspS9I	GGNCC	4 cut(s)	5, 113, 184, 749
AsuC2I	CCSGG	3 cut(s)	129, 164, 676
AsuHPI	GGTGA	4 cut(s)	368, 454, 755, 1373
AvaI	CYCGRG	1 cut(s)	777
AvaII	GGWCC	3 cut(s)	5, 113, 749
BalI	TGGCCA	3 cut(s)	625, 1096, 1342
BamHI	GGATCC	2 cut(s)	248, 872
BanII	GRGCYC	4 cut(s)	74, 127, 220, 437
BarI	GAAGNNNNNNTAC	2 cut(s)	407, 439
Bbv12I	GWGCWC	3 cut(s)	127, 724, 865
BbvI	GCAGC	4 cut(s)	35, 684, 1221, 1432
BccI	CCATC	8 cut(s)	239, 359, 497, 615, 740, 1324, 1328, 1332
BceAI	ACGGC	3 cut(s)	27, 55, 208
BcgI	CGANNNNNNTGC	2 cut(s)	557, 591
BciT130I	CCWGG	4 cut(s)	484, 555, 924, 1373
BciVI	GTATCC	1 cut(s)	137
BcnI	CCSGG	3 cut(s)	129, 164, 676
BcoDI	GTCTC	5 cut(s)	93, 183, 569, 659, 1283
BfaI	CTAG	2 cut(s)	983, 1477
BfoI	RGCGCY	2 cut(s)	29, 80
BfuI	GTATCC	1 cut(s)	137
BglI	GCCNNNNNGGC	1 cut(s)	192
BglII	AGATCT	1 cut(s)	1415
BisI	GCNGC	9 cut(s)	18, 21, 24, 226, 229, 698, 1028, 1235, 1446
BlpI	GCTNAGC	3 cut(s)	73, 723, 951
BlsI	GCNGC	9 cut(s)	19, 22, 25, 227, 230, 699, 1029, 1236, 1447
BmcAI	AGTACT	1 cut(s)	844
Bme1390I	CCNGG	7 cut(s)	129, 164, 484, 555, 676, 924, 1373
Bme18I	GGWCC	3 cut(s)	5, 113, 749
BmeT110I	CYCGRG	1 cut(s)	777
BmgBI	CACGTC	1 cut(s)	571
BmgT120I	GGNCC	4 cut(s)	5, 113, 184, 749
BmiI	GGNNCC	5 cut(s)	6, 250, 673, 874, 1268
BmrFI	CCNGG	7 cut(s)	129, 164, 484, 555, 676, 924, 1373
BmsI	GCATC	1 cut(s)	532
Bpu10I	CCTNAGC	1 cut(s)	1114
Bpu1102I	GCTNAGC	3 cut(s)	73, 723, 951
BpuEI	CTTGAG	2 cut(s)	600, 723
BpuMI	CCSGG	3 cut(s)	129, 164, 676
BsaAI	YACGTR	1 cut(s)	1133
BsaJI	CCNNGG	6 cut(s)	43, 162, 220, 253, 553, 1097
BsaWI	WCCGGW	3 cut(s)	82, 115, 272
BsaXI	ACNNNNNCTCC	2 cut(s)	205, 235
Bse118I	RCCGGY	1 cut(s)	115
Bse1I	ACTGG	1 cut(s)	673
Bse3DI	GCAATG	1 cut(s)	456
BseBI	CCWGG	4 cut(s)	484, 555, 924, 1373
BseDI	CCNNGG	6 cut(s)	43, 162, 220, 253, 553, 1097
BseGI	GGATG	8 cut(s)	370, 547, 626, 997, 1011, 1335, 1339, 1343
BseMI	GCAATG	1 cut(s)	456
BseMII	CTCAG	5 cut(s)	87, 737, 965, 1203, 1389
BseNI	ACTGG	1 cut(s)	673
BseRI	GAGGAG	2 cut(s)	114, 117
BseX3I	CGGCCG	1 cut(s)	40
BseXI	GCAGC	4 cut(s)	35, 684, 1221, 1432
BsgI	GTGCAG	1 cut(s)	1431
Bsh1236I	CGCG	1 cut(s)	885
Bsh1285I	CGRYCG	1 cut(s)	43
BshFI	GGCC	5 cut(s)	42, 186, 625, 1096, 1342
BshTI	ACCGGT	1 cut(s)	115
BsiEI	CGRYCG	1 cut(s)	43
BsiHKAI	GWGCWC	3 cut(s)	127, 724, 865
BsiHKCI	CYCGRG	1 cut(s)	777
BsiSI	CCGG	6 cut(s)	83, 116, 128, 164, 273, 675
BslFI	GGGAC	1 cut(s)	500
BsmAI	GTCTC	5 cut(s)	93, 183, 569, 659, 1283
BsmBI	CGTCTC	2 cut(s)	183, 1283
BsmFI	GGGAC	1 cut(s)	500
BsnI	GGCC	5 cut(s)	42, 186, 625, 1096, 1342
BsoBI	CYCGRG	1 cut(s)	777
Bsp1286I	GDGCHC	6 cut(s)	74, 127, 220, 437, 724, 865
Bsp143I	GATC	7 cut(s)	33, 248, 872, 886, 1063, 1157, 1415
Bsp1720I	GCTNAGC	3 cut(s)	73, 723, 951
BspANI	GGCC	5 cut(s)	42, 186, 625, 1096, 1342
BspCNI	CTCAG	5 cut(s)	86, 736, 964, 1204, 1390
BspFNI	CGCG	1 cut(s)	885
BspLI	GGNNCC	5 cut(s)	6, 250, 673, 874, 1268
BspPI	GGATC	5 cut(s)	243, 256, 867, 880, 1165
BsrDI	GCAATG	1 cut(s)	456
BsrFI	RCCGGY	1 cut(s)	115
BsrI	ACTGG	1 cut(s)	673
BssAI	RCCGGY	1 cut(s)	115
BssECI	CCNNGG	6 cut(s)	43, 162, 220, 253, 553, 1097
BssMI	GATC	7 cut(s)	33, 248, 872, 886, 1063, 1157, 1415
BssT1I	CCWWGG	1 cut(s)	1097
Bst2UI	CCWGG	4 cut(s)	484, 555, 924, 1373
Bst4CI	ACNGT	4 cut(s)	338, 499, 563, 1471
Bst6I	CTCTTC	2 cut(s)	889, 964
BstBAI	YACGTR	1 cut(s)	1133
BstC8I	GCNNGC	4 cut(s)	15, 314, 702, 1344
BstDEI	CTNAG	9 cut(s)	73, 400, 723, 890, 951, 1114, 1212, 1317, 1398
BstDSI	CCRYGG	3 cut(s)	43, 220, 253
BstENI	CCTNNNNNAGG	2 cut(s)	96, 1117
BstF5I	GGATG	8 cut(s)	370, 547, 626, 997, 1011, 1335, 1339, 1343
BstFNI	CGCG	1 cut(s)	885
BstH2I	RGCGCY	2 cut(s)	29, 80
BstHHI	GCGC	3 cut(s)	13, 28, 79
BstKTI	GATC	7 cut(s)	36, 251, 875, 889, 1066, 1160, 1418
BstMAI	GTCTC	5 cut(s)	93, 183, 569, 659, 1283
BstMBI	GATC	7 cut(s)	33, 248, 872, 886, 1063, 1157, 1415
BstMCI	CGRYCG	1 cut(s)	43
BstMWI	GCNNNNNNNGC	5 cut(s)	17, 23, 192, 479, 1243
BstNI	CCWGG	4 cut(s)	484, 555, 924, 1373
BstSCI	CCNGG	7 cut(s)	127, 162, 482, 553, 674, 922, 1371
BstSNI	TACGTA	1 cut(s)	1133
BstUI	CGCG	1 cut(s)	885
BstV1I	GCAGC	4 cut(s)	35, 684, 1221, 1432
BstX2I	RGATCY	3 cut(s)	248, 872, 1415
BstXI	CCANNNNNNTGG	1 cut(s)	1441
BstYI	RGATCY	3 cut(s)	248, 872, 1415
BstZI	CGGCCG	1 cut(s)	40
BsuI	GTATCC	1 cut(s)	137
BsuRI	GGCC	5 cut(s)	42, 186, 625, 1096, 1342
BtgI	CCRYGG	3 cut(s)	43, 220, 253
BtrI	CACGTC	1 cut(s)	571
BtsCI	GGATG	8 cut(s)	370, 547, 626, 997, 1011, 1335, 1339, 1343
BtsIMutI	CAGTG	1 cut(s)	1434
Cac8I	GCNNGC	4 cut(s)	15, 314, 702, 1344
CaiI	CAGNNNCTG	1 cut(s)	668
CfoI	GCGC	3 cut(s)	13, 28, 79
Cfr10I	RCCGGY	1 cut(s)	115
Cfr13I	GGNCC	4 cut(s)	5, 113, 184, 749
Csp6I	GTAC	3 cut(s)	64, 710, 843
CspAI	ACCGGT	1 cut(s)	115
CviAII	CATG	6 cut(s)	461, 509, 1015, 1092, 1310, 1358
CviQI	GTAC	3 cut(s)	64, 710, 843
DdeI	CTNAG	9 cut(s)	73, 400, 723, 890, 951, 1114, 1212, 1317, 1398
DpnI	GATC	7 cut(s)	35, 250, 874, 888, 1065, 1159, 1417
DpnII	GATC	7 cut(s)	33, 248, 872, 886, 1063, 1157, 1415
DraI	TTTAAA	1 cut(s)	1405
EaeI	YGGCCR	4 cut(s)	40, 623, 1094, 1340
EagI	CGGCCG	1 cut(s)	40
Eam1104I	CTCTTC	2 cut(s)	889, 964
EarI	CTCTTC	2 cut(s)	889, 964
Ecl136II	GAGCTC	1 cut(s)	125
EclXI	CGGCCG	1 cut(s)	40
Eco105I	TACGTA	1 cut(s)	1133
Eco130I	CCWWGG	1 cut(s)	1097
Eco24I	GRGCYC	4 cut(s)	74, 127, 220, 437
Eco47I	GGWCC	3 cut(s)	5, 113, 749
Eco52I	CGGCCG	1 cut(s)	40
Eco53kI	GAGCTC	1 cut(s)	125
Eco88I	CYCGRG	1 cut(s)	777
EcoICRI	GAGCTC	1 cut(s)	125
EcoNI	CCTNNNNNAGG	2 cut(s)	96, 1117
EcoO109I	RGGNCCY	1 cut(s)	5
EcoRI	GAATTC	1 cut(s)	1272
EcoRII	CCWGG	4 cut(s)	482, 553, 922, 1371
EcoT14I	CCWWGG	1 cut(s)	1097
EcoT38I	GRGCYC	4 cut(s)	74, 127, 220, 437
ErhI	CCWWGG	1 cut(s)	1097
Esp3I	CGTCTC	2 cut(s)	183, 1283
FaeI	CATG	6 cut(s)	464, 512, 1018, 1095, 1313, 1361
FalI	AAGNNNNNCTT	2 cut(s)	961, 993
FaqI	GGGAC	1 cut(s)	500
FatI	CATG	6 cut(s)	460, 508, 1014, 1091, 1309, 1357
FauI	CCCGC	3 cut(s)	160, 203, 305
FblI	GTMKAC	1 cut(s)	331
Fnu4HI	GCNGC	9 cut(s)	18, 21, 24, 226, 229, 698, 1028, 1235, 1446
FokI	GGATG	8 cut(s)	377, 554, 633, 1004, 1018, 1342, 1346, 1350
FriOI	GRGCYC	4 cut(s)	74, 127, 220, 437
Fsp4HI	GCNGC	9 cut(s)	18, 21, 24, 226, 229, 698, 1028, 1235, 1446
FspBI	CTAG	2 cut(s)	983, 1477
GlaI	GCGC	3 cut(s)	12, 27, 78
GluI	GCNGC	9 cut(s)	18, 21, 24, 226, 229, 698, 1028, 1235, 1446
HaeII	RGCGCY	2 cut(s)	29, 80
HaeIII	GGCC	5 cut(s)	42, 186, 625, 1096, 1342
HapII	CCGG	6 cut(s)	83, 116, 128, 164, 273, 675
HhaI	GCGC	3 cut(s)	13, 28, 79
Hin1II	CATG	6 cut(s)	464, 512, 1018, 1095, 1313, 1361
Hin6I	GCGC	3 cut(s)	11, 26, 77
HinP1I	GCGC	3 cut(s)	11, 26, 77
HinfI	GANTC	2 cut(s)	1109, 1253
HpaII	CCGG	6 cut(s)	83, 116, 128, 164, 273, 675
HphI	GGTGA	4 cut(s)	368, 454, 755, 1373
Hpy166II	GTNNAC	2 cut(s)	332, 824
Hpy188I	TCNGA	4 cut(s)	457, 531, 1213, 1278
Hpy188III	TCNNGA	6 cut(s)	351, 517, 539, 566, 779, 800
Hpy8I	GTNNAC	2 cut(s)	332, 824
Hpy99I	CGWCG	1 cut(s)	572
HpyAV	CCTTC	2 cut(s)	439, 447
HpyCH4III	ACNGT	4 cut(s)	338, 499, 563, 1471
HpyCH4IV	ACGT	3 cut(s)	533, 570, 1132
HpyCH4V	TGCA	4 cut(s)	545, 662, 849, 1448
HpyF10VI	GCNNNNNNNGC	5 cut(s)	17, 23, 192, 479, 1243
HpyF3I	CTNAG	9 cut(s)	73, 400, 723, 890, 951, 1114, 1212, 1317, 1398
HpySE526I	ACGT	3 cut(s)	533, 570, 1132
Hsp92II	CATG	6 cut(s)	464, 512, 1018, 1095, 1313, 1361
HspAI	GCGC	3 cut(s)	11, 26, 77
Kzo9I	GATC	7 cut(s)	33, 248, 872, 886, 1063, 1157, 1415
LmnI	GCTCC	6 cut(s)	122, 130, 275, 396, 868, 1266
Lsp1109I	GCAGC	4 cut(s)	35, 684, 1221, 1432
LweI	GCATC	1 cut(s)	532
MaeI	CTAG	2 cut(s)	983, 1477
MaeII	ACGT	3 cut(s)	533, 570, 1132
MaeIII	GTNAC	7 cut(s)	302, 356, 557, 973, 1133, 1304, 1312
MalI	GATC	7 cut(s)	35, 250, 874, 888, 1065, 1159, 1417
MboI	GATC	7 cut(s)	33, 248, 872, 886, 1063, 1157, 1415
MboII	GAAGA	5 cut(s)	368, 427, 815, 906, 981
MfeI	CAATTG	1 cut(s)	1322
MflI	RGATCY	3 cut(s)	248, 872, 1415
MhlI	GDGCHC	6 cut(s)	74, 127, 220, 437, 724, 865
MlsI	TGGCCA	3 cut(s)	625, 1096, 1342
MluNI	TGGCCA	3 cut(s)	625, 1096, 1342
MlyI	GAGTC	1 cut(s)	1247
MmeI	TCCRAC	2 cut(s)	634, 990
Mox20I	TGGCCA	3 cut(s)	625, 1096, 1342
MroXI	GAANNNNTTC	1 cut(s)	419
MscI	TGGCCA	3 cut(s)	625, 1096, 1342
MseI	TTAA	1 cut(s)	1404
MslI	CAYNNNNRTG	3 cut(s)	339, 717, 1439
Msp20I	TGGCCA	3 cut(s)	625, 1096, 1342
MspI	CCGG	6 cut(s)	83, 116, 128, 164, 273, 675
MspR9I	CCNGG	7 cut(s)	129, 164, 484, 555, 676, 924, 1373
MunI	CAATTG	1 cut(s)	1322
MvaI	CCWGG	4 cut(s)	484, 555, 924, 1373
MvnI	CGCG	1 cut(s)	885
MwoI	GCNNNNNNNGC	5 cut(s)	17, 23, 192, 479, 1243
NciI	CCSGG	3 cut(s)	129, 164, 676
NdeII	GATC	7 cut(s)	33, 248, 872, 886, 1063, 1157, 1415
NlaIII	CATG	6 cut(s)	464, 512, 1018, 1095, 1313, 1361
NlaIV	GGNNCC	5 cut(s)	6, 250, 673, 874, 1268
NmeAIII	GCCGAG	1 cut(s)	212
NmuCI	GTSAC	4 cut(s)	356, 973, 1304, 1312
OliI	CACNNNNGTG	2 cut(s)	339, 1439
PaeR7I	CTCGAG	1 cut(s)	777
PdmI	GAANNNNTTC	1 cut(s)	419
PfeI	GAWTC	1 cut(s)	1109
PflFI	GACNNNGTC	1 cut(s)	1310
PfoI	TCCNGGA	2 cut(s)	127, 674
PinAI	ACCGGT	1 cut(s)	115
PkrI	GCNGC	9 cut(s)	19, 22, 25, 227, 230, 699, 1029, 1236, 1447
PleI	GAGTC	1 cut(s)	1247
PpsI	GAGTC	1 cut(s)	1247
Ppu21I	YACGTR	1 cut(s)	1133
PpuMI	RGGWCCY	1 cut(s)	5
Psp124BI	GAGCTC	1 cut(s)	127
Psp5II	RGGWCCY	1 cut(s)	5
Psp6I	CCWGG	4 cut(s)	482, 553, 922, 1371
PspGI	CCWGG	4 cut(s)	482, 553, 922, 1371
PspN4I	GGNNCC	5 cut(s)	6, 250, 673, 874, 1268
PspPI	GGNCC	4 cut(s)	5, 113, 184, 749
PspPPI	RGGWCCY	1 cut(s)	5
PstNI	CAGNNNCTG	1 cut(s)	668
PsuI	RGATCY	3 cut(s)	248, 872, 1415
PsyI	GACNNNGTC	1 cut(s)	1310
RsaI	GTAC	3 cut(s)	65, 711, 844
RsaNI	GTAC	3 cut(s)	64, 710, 843
RseI	CAYNNNNRTG	3 cut(s)	339, 717, 1439
SacI	GAGCTC	1 cut(s)	127
SaqAI	TTAA	1 cut(s)	1404
SatI	GCNGC	9 cut(s)	18, 21, 24, 226, 229, 698, 1028, 1235, 1446
Sau3AI	GATC	7 cut(s)	33, 248, 872, 886, 1063, 1157, 1415
Sau96I	GGNCC	4 cut(s)	5, 113, 184, 749
ScaI	AGTACT	1 cut(s)	844
SchI	GAGTC	1 cut(s)	1247
ScrFI	CCNGG	7 cut(s)	129, 164, 484, 555, 676, 924, 1373
SduI	GDGCHC	6 cut(s)	74, 127, 220, 437, 724, 865
SfaNI	GCATC	1 cut(s)	532
Sfr274I	CTCGAG	1 cut(s)	777
SinI	GGWCC	3 cut(s)	5, 113, 749
SlaI	CTCGAG	1 cut(s)	777
SmiMI	CAYNNNNRTG	3 cut(s)	339, 717, 1439
SmlI	CTYRAG	3 cut(s)	615, 738, 777
SmoI	CTYRAG	3 cut(s)	615, 738, 777
SnaBI	TACGTA	1 cut(s)	1133
SspMI	CTAG	2 cut(s)	983, 1477
SstI	GAGCTC	1 cut(s)	127
StyD4I	CCNGG	7 cut(s)	127, 162, 482, 553, 674, 922, 1371
StyI	CCWWGG	1 cut(s)	1097
TaaI	ACNGT	4 cut(s)	338, 499, 563, 1471
TaiI	ACGT	3 cut(s)	536, 573, 1135
TaqI	TCGA	6 cut(s)	478, 567, 730, 778, 1107, 1218
TatI	WGTACW	1 cut(s)	842
TauI	GCSGC	5 cut(s)	20, 23, 228, 231, 1030
TfiI	GAWTC	1 cut(s)	1109
Tru1I	TTAA	1 cut(s)	1404
Tru9I	TTAA	1 cut(s)	1404
TscAI	CASTG	1 cut(s)	1441
TseFI	GTSAC	4 cut(s)	356, 973, 1304, 1312
TseI	GCWGC	4 cut(s)	23, 697, 1234, 1445
Tsp45I	GTSAC	4 cut(s)	356, 973, 1304, 1312
TspDTI	ATGAA	3 cut(s)	477, 678, 1346
TspRI	CASTG	1 cut(s)	1441
Tth111I	GACNNNGTC	1 cut(s)	1310
VpaK11BI	GGWCC	3 cut(s)	5, 113, 749
XagI	CCTNNNNNAGG	2 cut(s)	96, 1117
XapI	RAATTY	5 cut(s)	418, 795, 815, 961, 1272
XhoI	CTCGAG	1 cut(s)	777
XmiI	GTMKAC	1 cut(s)	331
XmnI	GAANNNNTTC	1 cut(s)	419
XspI	CTAG	2 cut(s)	983, 1477
ZrmI	AGTACT	1 cut(s)	844

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.