Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0005996

Physical Location & Seq

Genomic Coordinates Forward (+)

356871 .. 359609

Gene Structure 2739 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0004100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1347 bp

ATGAGAGGGTGTTTCCCGGCGCCGGCGGTCATCTCCGGTGCGGCGAGCTCCGCAATCACTCAAATTGTTTGGGGAAGAAGAAAAGATCCGTTGTTTCAATTCTCAGTCTGGTCCTCAACAACTGCAACCTCGTCTTGCTTAGTCTATAATAACAGTAAGCATGATAAGCGGAGACGAAGGCGGTGGCTTTCGTTATCAGAAGCAAGTAGAGGGAGAGGTGTGAGCGTTGGATTAGAGCAACAATGCGAGTGTGAAAGTGAAAGTGATAATGAATGGGTGGTGGTCAATTTTTACCAGTTTGTGTTGATCAAAGACGCGGAGGCACAAGTGGCCAAGCATCTCAATTTCTTGAAGGGGCGTGATATACGTGGGCGGATATATGTGAATGAACAAGGGATAAACGCGCAGTACAGTGGGCCGTCAAGAGACGCGCTTGCTTATGTTGAATGGGTGAGAGAGGATGAGAGATTTGCCAACTGCTTGGTGCAGACTTCTGCAGCACCAACTGGGCATGCCTTTCCAAAACTCAAGCTGCGGTATAAGCCTTCACTGGTTCAGTTAGAAGGAGGTATTAGTCATCTTCCTTTGCTGGACCCTTCAATGCGAGCTACACCTCTAGCACCATCCCAGTGGAGGAAAAGATTGGAGGCAGTGACCGGCAGCACTACTGCTGATGCATCAACTCAAAATCCTAAACCAAACTATATTCTATTGGATGTTAGAAACGGTTATGAGTGGGATATTGGTCATTTCAGTGGGGCTCGACGGCCAGATGTGGACTGCTTCAGGAGCACTTCGTTTGGGCTATGCCAACCAGAGGTCATTGCTGCAGATCCGTTAGCCAACGTTGATAAAGAAACAGATATATTGATGTATTGCACTGGAGGTATCCGTTGTGATGTATATTCCACGATCCTAAGACAACAGGGCTTTCAAAATTTATACACCTTAAAGGGGGGTGTCTCTCATTACCTAAAAAATGAAGGTCCTGTCCAGTGGGTTGGGAATTTGTTTGTGTTTGACTCCCGTCTTTCTCTCCCACCCGCTACCTACAAGCCTGAAGCCATAACTGAACCAAACAGAGTTGAAGTTTCAGAGAACAATACATTTGCCAGATGCTATATATGTGGTTTAGAAGTCTGCGAGTTACGGCATCGAAACTGCGCCAATCTTGACTGCAACCTACTTTATCTATGCTGCATGAACTGTGTTGAGGATTTAAGAGGATGTTGCTGTTCAAAGTGCACAACTGCTCCTCGACTTAGACCTGTTCTTCAGGGTCCCCATAGATATGAAAAATGGCACACGTACCGGGATTTGATTTCACAAAGCAAGTCGACAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003729 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03040 ko05202 ko05205 map03040 map05202 map05205

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

448

Amino Acids

50.42

Weight (kDa)

8.58

Isoelectric Point (pI)

42.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UPF0176_N	PF17773	92 - 182	1.6e-16	UPF0176 acylphosphatase like domain
Rhodanese	PF00581	231 - 325	2.7e-09	Rhodanese-like domain
Rhodanese_C	PF12368	335 - 416	2.1e-15	Rhodanase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005996)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63120 AT5G63120 AT5G63120 AT5G63120 AT5G63120
fragaria_vesca	FvH4_5g06110 FvH4_5g06110 FvH4_5g06110 FvH4_5g06110 FvH4_5g06110 FvH4_5g06110
malus_domestica	MD06G1166600.v1.1 MD14G1172300.v1.1
prunus_persica	Prupe.5G166600_v2.0.a1 Prupe.5G166600_v2.0.a1 Prupe.5G166600_v2.0.a1
pyrus_communis	pycom06g14930 pycom14g14390
rosa_chinensis	RchiOBHm_Chr7g0192711
rosa_laevigata	RLG00000004335
rosa_multiflora	Rmu_sc0002040.1_g000012
rosa_roxburghii	Rroxscaffold_3G00262730
rosa_rugosa	Rorug07G0004000 Rorug07G0004100
rosa_samantha	Rh7CG133900 Rh7DG131300
rosa_wichuraiana	Rw7G011040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	19
AccI	GTMKAC	1 cut(s)	1337
AccII	CGCG	3 cut(s)	317, 404, 431
AciI	CCGC	9 cut(s)	26, 41, 51, 169, 181, 317, 373, 535, 1044
AclI	AACGTT	1 cut(s)	846
AclWI	GGATC	3 cut(s)	80, 827, 907
AcoI	YGGCCR	2 cut(s)	330, 767
AcsI	RAATTY	2 cut(s)	937, 1006
AcuI	CTGAAG	3 cut(s)	769, 1080, 1259
AcyI	GRCGYC	1 cut(s)	20
AfaI	GTAC	2 cut(s)	410, 1310
AfiI	CCNNNNNNNGG	4 cut(s)	22, 633, 817, 954
AflIII	ACRYGT	1 cut(s)	1305
AgsI	TTSAA	7 cut(s)	98, 352, 446, 600, 935, 1088, 1239
AluBI	AGCT	4 cut(s)	48, 532, 608, 1343
AluI	AGCT	4 cut(s)	48, 532, 608, 1343
Alw21I	GWGCWC	3 cut(s)	50, 794, 1247
Alw26I	GTCTC	3 cut(s)	166, 420, 967
Alw44I	GTGCAC	1 cut(s)	1243
AlwI	GGATC	3 cut(s)	80, 827, 907
AoxI	GGCC	3 cut(s)	330, 416, 767
ApaLI	GTGCAC	1 cut(s)	1243
ApeKI	GCWGC	5 cut(s)	497, 532, 660, 827, 1197
ApoI	RAATTY	2 cut(s)	937, 1006
AspLEI	GCGC	4 cut(s)	22, 406, 433, 1166
AspS9I	GGNCC	5 cut(s)	111, 416, 592, 986, 1280
AsuC2I	CCSGG	2 cut(s)	17, 1313
AsuHPI	GGTGA	1 cut(s)	463
AvaII	GGWCC	4 cut(s)	111, 592, 986, 1280
BaeGI	GKGCMC	1 cut(s)	1247
BalI	TGGCCA	1 cut(s)	332
BanI	GGYRCC	1 cut(s)	19
BanII	GRGCYC	2 cut(s)	50, 763
Bbv12I	GWGCWC	3 cut(s)	50, 794, 1247
BbvI	GCAGC	5 cut(s)	509, 519, 672, 814, 1184
BccI	CCATC	1 cut(s)	631
BceAI	ACGGC	3 cut(s)	403, 782, 1166
BciVI	GTATCC	1 cut(s)	899
BclI	TGATCA	1 cut(s)	306
BcnI	CCSGG	2 cut(s)	17, 1313
BcoDI	GTCTC	3 cut(s)	166, 420, 967
BfaI	CTAG	1 cut(s)	617
BfmI	CTRYAG	2 cut(s)	495, 828
BfoI	RGCGCY	1 cut(s)	23
BfuI	GTATCC	1 cut(s)	899
BisI	GCNGC	6 cut(s)	42, 498, 533, 661, 828, 1198
BlsI	GCNGC	6 cut(s)	43, 499, 534, 662, 829, 1199
Bme1390I	CCNGG	2 cut(s)	17, 1313
Bme18I	GGWCC	4 cut(s)	111, 592, 986, 1280
BmgT120I	GGNCC	5 cut(s)	111, 416, 592, 986, 1280
BmiI	GGNNCC	4 cut(s)	21, 594, 1281, 1282
BmrFI	CCNGG	2 cut(s)	17, 1313
BmrI	ACTGGG	2 cut(s)	516, 622
BmsI	GCATC	5 cut(s)	346, 664, 686, 1106, 1162
BmuI	ACTGGG	2 cut(s)	516, 622
BoxI	GACNNNNGTC	1 cut(s)	1026
BpmI	CTGGAG	1 cut(s)	903
BpuEI	CTTGAG	1 cut(s)	512
BpuMI	CCSGG	2 cut(s)	17, 1313
BsaAI	YACGTR	2 cut(s)	368, 1308
BsaHI	GRCGYC	1 cut(s)	20
BsaWI	WCCGGW	1 cut(s)	35
BsaXI	ACNNNNNCTCC	2 cut(s)	1237, 1267
Bsc4I	CCNNNNNNNGG	4 cut(s)	22, 633, 817, 954
Bse118I	RCCGGY	2 cut(s)	22, 656
Bse1I	ACTGG	6 cut(s)	295, 511, 555, 628, 886, 994
Bse3DI	GCAATG	1 cut(s)	822
BseGI	GGATG	4 cut(s)	466, 623, 721, 1232
BseLI	CCNNNNNNNGG	4 cut(s)	22, 633, 817, 954
BseMI	GCAATG	1 cut(s)	822
BseMII	CTCAG	1 cut(s)	117
BseNI	ACTGG	6 cut(s)	295, 511, 555, 628, 886, 994
BseRI	GAGGAG	1 cut(s)	1245
BseSI	GKGCMC	1 cut(s)	1247
BseXI	GCAGC	5 cut(s)	509, 519, 672, 814, 1184
BsgI	GTGCAG	1 cut(s)	506
Bsh1236I	CGCG	3 cut(s)	317, 404, 431
BshFI	GGCC	3 cut(s)	332, 418, 769
BshNI	GGYRCC	1 cut(s)	19
BsiHKAI	GWGCWC	3 cut(s)	50, 794, 1247
BsiSI	CCGG	5 cut(s)	17, 23, 36, 657, 1312
BslFI	GGGAC	1 cut(s)	1266
BslI	CCNNNNNNNGG	4 cut(s)	22, 633, 817, 954
BsmAI	GTCTC	3 cut(s)	166, 420, 967
BsmBI	CGTCTC	2 cut(s)	166, 420
BsmFI	GGGAC	1 cut(s)	1266
BsnI	GGCC	3 cut(s)	332, 418, 769
Bsp1286I	GDGCHC	4 cut(s)	50, 763, 794, 1247
Bsp143I	GATC	4 cut(s)	85, 306, 832, 912
BspACI	CCGC	9 cut(s)	26, 41, 51, 169, 181, 317, 373, 535, 1044
BspANI	GGCC	3 cut(s)	332, 418, 769
BspCNI	CTCAG	1 cut(s)	116
BspFNI	CGCG	3 cut(s)	317, 404, 431
BspLI	GGNNCC	4 cut(s)	21, 594, 1281, 1282
BspMAI	CTGCAG	2 cut(s)	499, 832
BspPI	GGATC	3 cut(s)	80, 827, 907
BspT107I	GGYRCC	1 cut(s)	19
BsrDI	GCAATG	1 cut(s)	822
BsrFI	RCCGGY	2 cut(s)	22, 656
BsrI	ACTGG	6 cut(s)	295, 511, 555, 628, 886, 994
BssAI	RCCGGY	2 cut(s)	22, 656
BssMI	GATC	4 cut(s)	85, 306, 832, 912
BssNI	GRCGYC	1 cut(s)	20
Bst4CI	ACNGT	4 cut(s)	155, 413, 728, 1208
BstACI	GRCGYC	1 cut(s)	20
BstBAI	YACGTR	2 cut(s)	368, 1308
BstC8I	GCNNGC	5 cut(s)	24, 46, 435, 513, 606
BstDEI	CTNAG	4 cut(s)	103, 139, 917, 1262
BstF5I	GGATG	4 cut(s)	466, 623, 721, 1232
BstFNI	CGCG	3 cut(s)	317, 404, 431
BstH2I	RGCGCY	1 cut(s)	23
BstHHI	GCGC	4 cut(s)	22, 406, 433, 1166
BstKTI	GATC	4 cut(s)	88, 309, 835, 915
BstMAI	GTCTC	3 cut(s)	166, 420, 967
BstMBI	GATC	4 cut(s)	85, 306, 832, 912
BstMWI	GCNNNNNNNGC	5 cut(s)	50, 166, 329, 541, 789
BstNSI	RCATGY	1 cut(s)	515
BstPAI	GACNNNNGTC	1 cut(s)	1026
BstSCI	CCNGG	2 cut(s)	15, 1311
BstSFI	CTRYAG	2 cut(s)	495, 828
BstSLI	GKGCMC	1 cut(s)	1247
BstUI	CGCG	3 cut(s)	317, 404, 431
BstV1I	GCAGC	5 cut(s)	509, 519, 672, 814, 1184
BstX2I	RGATCY	2 cut(s)	85, 832
BstXI	CCANNNNNNTGG	3 cut(s)	481, 630, 1001
BstYI	RGATCY	2 cut(s)	85, 832
BsuI	GTATCC	1 cut(s)	899
BsuRI	GGCC	3 cut(s)	332, 418, 769
BtsCI	GGATG	4 cut(s)	466, 623, 721, 1232
BtsI	GCAGTG	1 cut(s)	657
BtsIMutI	CAGTG	7 cut(s)	418, 548, 635, 657, 760, 879, 1001
Cac8I	GCNNGC	5 cut(s)	24, 46, 435, 513, 606
CfoI	GCGC	4 cut(s)	22, 406, 433, 1166
Cfr10I	RCCGGY	2 cut(s)	22, 656
Cfr13I	GGNCC	5 cut(s)	111, 416, 592, 986, 1280
CseI	GACGC	2 cut(s)	323, 437
Csp6I	GTAC	2 cut(s)	409, 1309
CviAII	CATG	3 cut(s)	161, 512, 1201
CviQI	GTAC	2 cut(s)	409, 1309
DdeI	CTNAG	4 cut(s)	103, 139, 917, 1262
DinI	GGCGCC	1 cut(s)	21
DpnI	GATC	4 cut(s)	87, 308, 834, 914
DpnII	GATC	4 cut(s)	85, 306, 832, 912
EaeI	YGGCCR	2 cut(s)	330, 767
EciI	GGCGGA	1 cut(s)	388
Ecl136II	GAGCTC	1 cut(s)	48
Eco24I	GRGCYC	2 cut(s)	50, 763
Eco47I	GGWCC	4 cut(s)	111, 592, 986, 1280
Eco53kI	GAGCTC	1 cut(s)	48
Eco57I	CTGAAG	3 cut(s)	769, 1080, 1259
EcoICRI	GAGCTC	1 cut(s)	48
EcoO109I	RGGNCCY	2 cut(s)	986, 1280
EcoT22I	ATGCAT	1 cut(s)	679
EcoT38I	GRGCYC	2 cut(s)	50, 763
EgeI	GGCGCC	1 cut(s)	21
EheI	GGCGCC	1 cut(s)	21
Esp3I	CGTCTC	2 cut(s)	166, 420
FaeI	CATG	3 cut(s)	164, 515, 1204
FaqI	GGGAC	1 cut(s)	1266
FatI	CATG	3 cut(s)	160, 511, 1200
FauI	CCCGC	1 cut(s)	1051
FbaI	TGATCA	1 cut(s)	306
FblI	GTMKAC	1 cut(s)	1337
Fnu4HI	GCNGC	6 cut(s)	42, 498, 533, 661, 828, 1198
FokI	GGATG	4 cut(s)	473, 610, 728, 1239
FriOI	GRGCYC	2 cut(s)	50, 763
Fsp4HI	GCNGC	6 cut(s)	42, 498, 533, 661, 828, 1198
FspBI	CTAG	1 cut(s)	617
GlaI	GCGC	4 cut(s)	21, 405, 432, 1165
GluI	GCNGC	6 cut(s)	42, 498, 533, 661, 828, 1198
GsuI	CTGGAG	1 cut(s)	903
HaeII	RGCGCY	1 cut(s)	23
HaeIII	GGCC	3 cut(s)	332, 418, 769
HapII	CCGG	5 cut(s)	17, 23, 36, 657, 1312
HgaI	GACGC	2 cut(s)	323, 437
HhaI	GCGC	4 cut(s)	22, 406, 433, 1166
Hin1I	GRCGYC	1 cut(s)	20
Hin1II	CATG	3 cut(s)	164, 515, 1204
Hin6I	GCGC	4 cut(s)	20, 404, 431, 1164
HinP1I	GCGC	4 cut(s)	20, 404, 431, 1164
HincII	GTYRAC	1 cut(s)	1338
HindII	GTYRAC	1 cut(s)	1338
HinfI	GANTC	1 cut(s)	1022
HpaII	CCGG	5 cut(s)	17, 23, 36, 657, 1312
HphI	GGTGA	1 cut(s)	463
Hpy166II	GTNNAC	3 cut(s)	778, 1245, 1338
Hpy188I	TCNGA	2 cut(s)	199, 1096
Hpy188III	TCNNGA	4 cut(s)	349, 423, 787, 1172
Hpy8I	GTNNAC	3 cut(s)	778, 1245, 1338
Hpy99I	CGWCG	1 cut(s)	768
HpyAV	CCTTC	6 cut(s)	171, 346, 555, 557, 606, 977
HpyCH4III	ACNGT	4 cut(s)	155, 413, 728, 1208
HpyCH4IV	ACGT	3 cut(s)	367, 846, 1307
HpyCH4V	TGCA	9 cut(s)	125, 487, 497, 677, 830, 879, 1179, 1200, 1245
HpyF10VI	GCNNNNNNNGC	5 cut(s)	50, 166, 329, 541, 789
HpyF3I	CTNAG	4 cut(s)	103, 139, 917, 1262
HpySE526I	ACGT	3 cut(s)	367, 846, 1307
Hsp92I	GRCGYC	1 cut(s)	20
Hsp92II	CATG	3 cut(s)	164, 515, 1204
HspAI	GCGC	4 cut(s)	20, 404, 431, 1164
KasI	GGCGCC	1 cut(s)	19
KflI	GGGWCCC	1 cut(s)	1280
KroI	GCCGGC	1 cut(s)	22
KroNI	GCCGGC	1 cut(s)	24
Ksp22I	TGATCA	1 cut(s)	306
Kzo9I	GATC	4 cut(s)	85, 306, 832, 912
LmnI	GCTCC	3 cut(s)	53, 789, 1258
Lsp1109I	GCAGC	5 cut(s)	509, 519, 672, 814, 1184
LweI	GCATC	5 cut(s)	346, 664, 686, 1106, 1162
MaeI	CTAG	1 cut(s)	617
MaeII	ACGT	3 cut(s)	367, 846, 1307
MaeIII	GTNAC	2 cut(s)	652, 1146
MalI	GATC	4 cut(s)	87, 308, 834, 914
MboI	GATC	4 cut(s)	85, 306, 832, 912
MboII	GAAGA	4 cut(s)	87, 90, 572, 1265
MflI	RGATCY	2 cut(s)	85, 832
MhlI	GDGCHC	4 cut(s)	50, 763, 794, 1247
MlsI	TGGCCA	1 cut(s)	332
MluCI	AATT	6 cut(s)	63, 98, 286, 343, 937, 1006
MluNI	TGGCCA	1 cut(s)	332
Mly113I	GGCGCC	1 cut(s)	20
MlyI	GAGTC	1 cut(s)	1016
MmeI	TCCRAC	1 cut(s)	208
Mox20I	TGGCCA	1 cut(s)	332
Mph1103I	ATGCAT	1 cut(s)	679
MreI	CGCCGGCG	1 cut(s)	22
MroNI	GCCGGC	1 cut(s)	22
MscI	TGGCCA	1 cut(s)	332
MseI	TTAA	2 cut(s)	950, 1220
MslI	CAYNNNNRTG	3 cut(s)	628, 753, 1290
Msp20I	TGGCCA	1 cut(s)	332
MspI	CCGG	5 cut(s)	17, 23, 36, 657, 1312
MspR9I	CCNGG	2 cut(s)	17, 1313
MvnI	CGCG	3 cut(s)	317, 404, 431
MwoI	GCNNNNNNNGC	5 cut(s)	50, 166, 329, 541, 789
NaeI	GCCGGC	1 cut(s)	24
NarI	GGCGCC	1 cut(s)	20
NciI	CCSGG	2 cut(s)	17, 1313
NdeII	GATC	4 cut(s)	85, 306, 832, 912
NgoMIV	GCCGGC	1 cut(s)	22
NlaIII	CATG	3 cut(s)	164, 515, 1204
NlaIV	GGNNCC	4 cut(s)	21, 594, 1281, 1282
NmuCI	GTSAC	1 cut(s)	652
NsiI	ATGCAT	1 cut(s)	679
NspI	RCATGY	1 cut(s)	515
PaeI	GCATGC	1 cut(s)	515
PdiI	GCCGGC	1 cut(s)	24
PkrI	GCNGC	6 cut(s)	43, 499, 534, 662, 829, 1199
PleI	GAGTC	1 cut(s)	1016
PluTI	GGCGCC	1 cut(s)	23
PpsI	GAGTC	1 cut(s)	1016
Ppu21I	YACGTR	2 cut(s)	368, 1308
PpuMI	RGGWCCY	2 cut(s)	986, 1280
PshAI	GACNNNNGTC	1 cut(s)	1026
Psp124BI	GAGCTC	1 cut(s)	50
Psp1406I	AACGTT	1 cut(s)	846
Psp5II	RGGWCCY	2 cut(s)	986, 1280
PspN4I	GGNNCC	4 cut(s)	21, 594, 1281, 1282
PspPI	GGNCC	5 cut(s)	111, 416, 592, 986, 1280
PspPPI	RGGWCCY	2 cut(s)	986, 1280
PstI	CTGCAG	2 cut(s)	499, 832
PsuI	RGATCY	2 cut(s)	85, 832
RsaI	GTAC	2 cut(s)	410, 1310
RsaNI	GTAC	2 cut(s)	409, 1309
RseI	CAYNNNNRTG	3 cut(s)	628, 753, 1290
SacI	GAGCTC	1 cut(s)	50
SalI	GTCGAC	1 cut(s)	1336
SaqAI	TTAA	2 cut(s)	950, 1220
SatI	GCNGC	6 cut(s)	42, 498, 533, 661, 828, 1198
Sau3AI	GATC	4 cut(s)	85, 306, 832, 912
Sau96I	GGNCC	5 cut(s)	111, 416, 592, 986, 1280
SchI	GAGTC	1 cut(s)	1016
ScrFI	CCNGG	2 cut(s)	17, 1313
SduI	GDGCHC	4 cut(s)	50, 763, 794, 1247
SfaNI	GCATC	5 cut(s)	346, 664, 686, 1106, 1162
SfcI	CTRYAG	2 cut(s)	495, 828
SfoI	GGCGCC	1 cut(s)	21
SgrAI	CRCCGGYG	1 cut(s)	22
SinI	GGWCC	4 cut(s)	111, 592, 986, 1280
SmiMI	CAYNNNNRTG	3 cut(s)	628, 753, 1290
SmlI	CTYRAG	1 cut(s)	527
SmoI	CTYRAG	1 cut(s)	527
SphI	GCATGC	1 cut(s)	515
Sse9I	AATT	6 cut(s)	63, 98, 286, 343, 937, 1006
SsiI	CCGC	9 cut(s)	26, 41, 51, 169, 181, 317, 373, 535, 1044
SspDI	GGCGCC	1 cut(s)	19
SspMI	CTAG	1 cut(s)	617
SstI	GAGCTC	1 cut(s)	50
StyD4I	CCNGG	2 cut(s)	15, 1311
TaaI	ACNGT	4 cut(s)	155, 413, 728, 1208
TaiI	ACGT	3 cut(s)	370, 849, 1310
TaqI	TCGA	4 cut(s)	763, 1156, 1258, 1337
TasI	AATT	6 cut(s)	63, 98, 286, 343, 937, 1006
TatI	WGTACW	1 cut(s)	408
TauI	GCSGC	1 cut(s)	44
Tru1I	TTAA	2 cut(s)	950, 1220
Tru9I	TTAA	2 cut(s)	950, 1220
TscAI	CASTG	7 cut(s)	418, 555, 635, 657, 760, 886, 1001
TseFI	GTSAC	1 cut(s)	652
TseI	GCWGC	5 cut(s)	497, 532, 660, 827, 1197
Tsp45I	GTSAC	1 cut(s)	652
TspDTI	ATGAA	5 cut(s)	285, 402, 996, 1217, 1308
TspGWI	ACGGA	3 cut(s)	78, 825, 881
TspRI	CASTG	7 cut(s)	418, 555, 635, 657, 760, 886, 1001
VneI	GTGCAC	1 cut(s)	1243
VpaK11BI	GGWCC	4 cut(s)	111, 592, 986, 1280
XapI	RAATTY	2 cut(s)	937, 1006
XceI	RCATGY	1 cut(s)	515
XmiI	GTMKAC	1 cut(s)	1337
XspI	CTAG	1 cut(s)	617
Zsp2I	ATGCAT	1 cut(s)	679

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.