Prupe.5G175000_v2.0.a1
ERF Family

Histidine phosphatase superfamily (branch 1)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0012122
Physical Location & Seq
Reverse (-)
14886603 .. 14888638
2036 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G175000.2

Sequence Viewer

Length: 906 bp
ATGATAGTAACATCTTCTTCCATTAAAACCCCTCCTCCTCCTCATCCTCCAAATCCATGGGCAGCATCTCAAAACCCTAACAATTCATTCCTACCCATCAACCGTCGCAGCCTTCTGGCTGCGCTCACCATCTCCACCACCACAACCCCTTTTGCACACACTTTTGTCAACCCCATGTCAGCACAAGAAGTAGCCTTTGCTCGTGGCCTCTTCCAGATGCCCCCAGTTAGGCTCACCAACCGGTATTTTCTGGTGAGGGCTGGGGAGTCTGAATATGAGAGCATTGGAGTAATTAATACCAACCCGGTTGCGAAAACTTCTGTTGATAACGGTTTGTCAGAGAAGGGGAAGAAGCAGGCTGTGAGGTCAGCTTTCGATTTGAAGGAAATGGGAGCTTGTGATAAGAACTGTTGGATATGGCCTTCCATTACTCAGAGAGCTTACCAGGCTGCAGAGATCATTGCATCGGTTAATGGGGTCAGTCGAAGTTATATTGTCCCAGAGTACAGCTTTCTCGATGCCAGAGGATTGGGAGCTTATGAAGGAAAGAAACTGGAAGCTGTTTCAGAAGTATATGCATCAGATACTCTTTCTCCAACAATCAAGCCTCCTCCTATTGACGACGGAACCCCAAACGAGAGTGTTTCAGATGTCTTTGTTCGGGTAATACAACTCATGTCCATACTTGAGACTCAGTACTCCGAAGACACAGTGATTATTGTCTCACCAGATTCAGACAATTTGACAATCCTACAAGCTGGTATAATTGGACTTGACTTGCGCAGGCACAGGGAGCTTTCTTTTGCACCTGGAGAAGTCAGATTTGTTGATACCAGTAGTGTACCTACTTACAAGCAACCTGCTTCAGCTGTATATAAATGTCTAAAACCACCAAATTGTAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
His_Phos_1

Protein Analysis

302

Amino Acids

32.92

Weight (kDa)

6.34

Isoelectric Point (pI)

42.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G62840 AT5G62840
fragaria_vesca FvH4_5g05200 FvH4_5g05200 FvH4_5g05200
malus_domestica MD14G1182500.v1.1
prunus_persica Prupe.5G175000_v2.0.a1 Prupe.5G175000_v2.0.a1 Prupe.5G175000_v2.0.a1
pyrus_communis pycom14g15160
rosa_chinensis RchiOBHm_Chr7g0193711
rosa_laevigata RLG00000004249
rosa_roxburghii Rroxscaffold_3G00261880
rosa_rugosa Rorug07G0011400
rosa_samantha Rh7AG138300 Rh7BG138500 Rh7CG142100 Rh7DG139600
rosa_wichuraiana Rw7G011780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 782
Acc36I ACCTGC 1 cut(s) 868
AcuI CTGAAG 1 cut(s) 849
AfaI GTAC 3 cut(s) 506, 698, 843
AfiI CCNNNNNNNGG 1 cut(s) 228
AgeI ACCGGT 1 cut(s) 240
AgsI TTSAA 1 cut(s) 382
AjnI CCWGG 2 cut(s) 444, 808
AluBI AGCT 9 cut(s) 371, 395, 440, 510, 536, 560, 758, 796, 869
AluI AGCT 9 cut(s) 371, 395, 440, 510, 536, 560, 758, 796, 869
Alw26I GTCTC 2 cut(s) 683, 727
AoxI GGCC 2 cut(s) 205, 419
ApeKI GCWGC 4 cut(s) 62, 108, 119, 449
AseI ATTAAT 1 cut(s) 294
AsiGI ACCGGT 1 cut(s) 240
AspLEI GCGC 2 cut(s) 124, 783
AsuC2I CCSGG 1 cut(s) 305
AsuHPI GGTGA 4 cut(s) 118, 226, 265, 717
BauI CACGAG 1 cut(s) 201
BbsI GAAGAC 1 cut(s) 711
BbvI GCAGC 4 cut(s) 74, 106, 120, 436
BccI CCATC 2 cut(s) 104, 137
BciT130I CCWGG 2 cut(s) 446, 810
BcnI CCSGG 1 cut(s) 305
BcoDI GTCTC 2 cut(s) 683, 727
BfmI CTRYAG 1 cut(s) 450
BfuAI ACCTGC 1 cut(s) 868
BisI GCNGC 4 cut(s) 63, 109, 120, 450
BlsI GCNGC 4 cut(s) 64, 110, 121, 451
BmcAI AGTACT 1 cut(s) 698
Bme1390I CCNGG 3 cut(s) 305, 446, 810
BmiI GGNNCC 1 cut(s) 628
BmrFI CCNGG 3 cut(s) 305, 446, 810
BmrI ACTGGG 1 cut(s) 218
BmsI GCATC 5 cut(s) 74, 207, 473, 508, 587
BmuI ACTGGG 1 cut(s) 218
BpiI GAAGAC 1 cut(s) 711
BpmI CTGGAG 1 cut(s) 831
BpuEI CTTGAG 1 cut(s) 707
BpuMI CCSGG 1 cut(s) 305
BsaJI CCNNGG 1 cut(s) 56
BsaWI WCCGGW 1 cut(s) 240
BsaXI ACNNNNNCTCC 4 cut(s) 19, 49, 577, 607
Bsc4I CCNNNNNNNGG 1 cut(s) 228
Bse118I RCCGGY 1 cut(s) 240
Bse1I ACTGG 3 cut(s) 224, 558, 834
Bse3DI GCAATG 1 cut(s) 459
BseBI CCWGG 2 cut(s) 446, 810
BseDI CCNNGG 1 cut(s) 56
BseGI GGATG 1 cut(s) 43
BseLI CCNNNNNNNGG 1 cut(s) 228
BseMI GCAATG 1 cut(s) 459
BseMII CTCAG 2 cut(s) 446, 707
BseNI ACTGG 3 cut(s) 224, 558, 834
BseRI GAGGAG 4 cut(s) 24, 27, 30, 600
BseXI GCAGC 4 cut(s) 74, 106, 120, 436
BseYI CCCAGC 1 cut(s) 260
BshFI GGCC 2 cut(s) 207, 421
BshTI ACCGGT 1 cut(s) 240
BsiSI CCGG 2 cut(s) 241, 305
BslFI GGGAC 1 cut(s) 482
BslI CCNNNNNNNGG 1 cut(s) 228
BsmAI GTCTC 2 cut(s) 683, 727
BsmFI GGGAC 1 cut(s) 482
BsnI GGCC 2 cut(s) 207, 421
Bsp143I GATC 1 cut(s) 456
Bsp19I CCATGG 1 cut(s) 56
BspANI GGCC 2 cut(s) 207, 421
BspCNI CTCAG 2 cut(s) 445, 706
BspLI GGNNCC 1 cut(s) 628
BspMAI CTGCAG 1 cut(s) 454
BspMI ACCTGC 1 cut(s) 868
BsrDI GCAATG 1 cut(s) 459
BsrFI RCCGGY 1 cut(s) 240
BsrI ACTGG 3 cut(s) 224, 558, 834
BssAI RCCGGY 1 cut(s) 240
BssECI CCNNGG 1 cut(s) 56
BssMI GATC 1 cut(s) 456
BssSI CACGAG 1 cut(s) 201
BssT1I CCWWGG 1 cut(s) 56
Bst2BI CACGAG 1 cut(s) 201
Bst2UI CCWGG 2 cut(s) 446, 810
Bst4CI ACNGT 4 cut(s) 104, 332, 410, 712
Bst6I CTCTTC 1 cut(s) 215
BstC8I GCNNGC 2 cut(s) 357, 785
BstDEI CTNAG 2 cut(s) 432, 693
BstDSI CCRYGG 1 cut(s) 56
BstF5I GGATG 1 cut(s) 43
BstHHI GCGC 2 cut(s) 124, 783
BstKTI GATC 1 cut(s) 459
BstMAI GTCTC 2 cut(s) 683, 727
BstMBI GATC 1 cut(s) 456
BstMWI GCNNNNNNNGC 2 cut(s) 446, 793
BstNI CCWGG 2 cut(s) 446, 810
BstSCI CCNGG 3 cut(s) 303, 444, 808
BstSFI CTRYAG 1 cut(s) 450
BstV1I GCAGC 4 cut(s) 74, 106, 120, 436
BstV2I GAAGAC 1 cut(s) 711
BstXI CCANNNNNNTGG 2 cut(s) 57, 529
BsuRI GGCC 2 cut(s) 207, 421
BtgI CCRYGG 1 cut(s) 56
BtsCI GGATG 1 cut(s) 43
BtsIMutI CAGTG 1 cut(s) 717
BveI ACCTGC 1 cut(s) 868
Cac8I GCNNGC 2 cut(s) 357, 785
CfoI GCGC 2 cut(s) 124, 783
Cfr10I RCCGGY 1 cut(s) 240
Csp6I GTAC 3 cut(s) 505, 697, 842
CspAI ACCGGT 1 cut(s) 240
CviAII CATG 3 cut(s) 57, 175, 676
CviQI GTAC 3 cut(s) 505, 697, 842
DdeI CTNAG 2 cut(s) 432, 693
DpnI GATC 1 cut(s) 458
DpnII GATC 1 cut(s) 456
Eam1104I CTCTTC 1 cut(s) 215
EarI CTCTTC 1 cut(s) 215
Eco130I CCWWGG 1 cut(s) 56
Eco57I CTGAAG 1 cut(s) 849
EcoRII CCWGG 2 cut(s) 444, 808
EcoT14I CCWWGG 1 cut(s) 56
EcoT22I ATGCAT 1 cut(s) 580
ErhI CCWWGG 1 cut(s) 56
FaeI CATG 3 cut(s) 60, 178, 679
FaqI GGGAC 1 cut(s) 482
FatI CATG 3 cut(s) 56, 174, 675
Fnu4HI GCNGC 4 cut(s) 63, 109, 120, 450
FokI GGATG 1 cut(s) 30
Fsp4HI GCNGC 4 cut(s) 63, 109, 120, 450
FspI TGCGCA 1 cut(s) 782
GlaI GCGC 2 cut(s) 123, 782
GluI GCNGC 4 cut(s) 63, 109, 120, 450
GsaI CCCAGC 1 cut(s) 264
GsuI CTGGAG 1 cut(s) 831
HaeIII GGCC 2 cut(s) 207, 421
HapII CCGG 2 cut(s) 241, 305
HhaI GCGC 2 cut(s) 124, 783
Hin1II CATG 3 cut(s) 60, 178, 679
Hin6I GCGC 2 cut(s) 122, 781
HinP1I GCGC 2 cut(s) 122, 781
HincII GTYRAC 1 cut(s) 169
HindII GTYRAC 1 cut(s) 169
HinfI GANTC 3 cut(s) 266, 691, 731
HpaII CCGG 2 cut(s) 241, 305
HphI GGTGA 4 cut(s) 118, 226, 265, 717
Hpy166II GTNNAC 2 cut(s) 169, 842
Hpy188I TCNGA 9 cut(s) 271, 340, 435, 568, 583, 649, 703, 736, 821
Hpy188III TCNNGA 2 cut(s) 214, 515
Hpy8I GTNNAC 2 cut(s) 169, 842
Hpy99I CGWCG 2 cut(s) 108, 626
HpyAV CCTTC 5 cut(s) 122, 337, 376, 432, 536
HpyCH4III ACNGT 4 cut(s) 104, 332, 410, 712
HpyCH4V TGCA 5 cut(s) 155, 452, 464, 578, 806
HpyF10VI GCNNNNNNNGC 2 cut(s) 446, 793
HpyF3I CTNAG 2 cut(s) 432, 693
Hsp92II CATG 3 cut(s) 60, 178, 679
HspAI GCGC 2 cut(s) 122, 781
Kzo9I GATC 1 cut(s) 456
LmnI GCTCC 3 cut(s) 392, 533, 793
Lsp1109I GCAGC 4 cut(s) 74, 106, 120, 436
LweI GCATC 5 cut(s) 74, 207, 473, 508, 587
MaeIII GTNAC 2 cut(s) 7, 899
MalI GATC 1 cut(s) 458
MboI GATC 1 cut(s) 456
MboII GAAGA 5 cut(s) 6, 9, 202, 361, 716
MluCI AATT 5 cut(s) 82, 291, 739, 765, 895
MlyI GAGTC 2 cut(s) 275, 685
MmeI TCCRAC 2 cut(s) 392, 620
Mph1103I ATGCAT 1 cut(s) 580
MseI TTAA 3 cut(s) 24, 294, 471
MspA1I CMGCKG 1 cut(s) 869
MspI CCGG 2 cut(s) 241, 305
MspR9I CCNGG 3 cut(s) 305, 446, 810
MvaI CCWGG 2 cut(s) 446, 810
MwoI GCNNNNNNNGC 2 cut(s) 446, 793
NciI CCSGG 1 cut(s) 305
NcoI CCATGG 1 cut(s) 56
NdeII GATC 1 cut(s) 456
NlaIII CATG 3 cut(s) 60, 178, 679
NlaIV GGNNCC 1 cut(s) 628
NsbI TGCGCA 1 cut(s) 782
NsiI ATGCAT 1 cut(s) 580
PfeI GAWTC 1 cut(s) 731
PinAI ACCGGT 1 cut(s) 240
PkrI GCNGC 4 cut(s) 64, 110, 121, 451
PleI GAGTC 2 cut(s) 274, 685
PpsI GAGTC 2 cut(s) 274, 685
PshBI ATTAAT 1 cut(s) 294
Psp6I CCWGG 2 cut(s) 444, 808
PspFI CCCAGC 1 cut(s) 260
PspGI CCWGG 2 cut(s) 444, 808
PspN4I GGNNCC 1 cut(s) 628
PstI CTGCAG 1 cut(s) 454
PvuII CAGCTG 1 cut(s) 869
RsaI GTAC 3 cut(s) 506, 698, 843
RsaNI GTAC 3 cut(s) 505, 697, 842
SaqAI TTAA 3 cut(s) 24, 294, 471
SatI GCNGC 4 cut(s) 63, 109, 120, 450
Sau3AI GATC 1 cut(s) 456
ScaI AGTACT 1 cut(s) 698
SchI GAGTC 2 cut(s) 275, 685
ScrFI CCNGG 3 cut(s) 305, 446, 810
SfaNI GCATC 5 cut(s) 74, 207, 473, 508, 587
SfcI CTRYAG 1 cut(s) 450
SmlI CTYRAG 1 cut(s) 686
SmoI CTYRAG 1 cut(s) 686
Sse9I AATT 5 cut(s) 82, 291, 739, 765, 895
StyD4I CCNGG 3 cut(s) 303, 444, 808
StyI CCWWGG 1 cut(s) 56
TaaI ACNGT 4 cut(s) 104, 332, 410, 712
TaqI TCGA 3 cut(s) 375, 484, 516
TasI AATT 5 cut(s) 82, 291, 739, 765, 895
TatI WGTACW 2 cut(s) 504, 696
TfiI GAWTC 1 cut(s) 731
Tru1I TTAA 3 cut(s) 24, 294, 471
Tru9I TTAA 3 cut(s) 24, 294, 471
TscAI CASTG 1 cut(s) 717
TseI GCWGC 4 cut(s) 62, 108, 119, 449
TspDTI ATGAA 2 cut(s) 75, 555
TspGWI ACGGA 1 cut(s) 639
TspRI CASTG 1 cut(s) 717
VspI ATTAAT 1 cut(s) 294
ZrmI AGTACT 1 cut(s) 698
Zsp2I ATGCAT 1 cut(s) 580
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.