Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0012122

Physical Location & Seq

Genomic Coordinates Reverse (-)

11537541 .. 11543788

Gene Structure 6248 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG142100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1797 bp

ATGTTGTGCCACATAATCAAACGGCATTCCGTTTGGTCCATCAGTTGGGATTTGGAGGGAGATGAAGTGAAAGGAGAAGAGCAAAACCAAACCCAGAACCCAGAAGACTCAGCCCACAAACACCCGCCAAAAATGATAGTAACATCTTCTTCCTCCCTTGCAAACCCTCCTCATCTTCATCTTCCAACTCCATCAACAACCTCCAAAAACCCTAACAATGCATTCCTACCCATCAGCCGCCGCAACGTCCTTGCTGCCCTCACCCTGACCGCAGCCCCTTTTGCCCTCGACCCCATGTCCGTACAAGAGATAGCTTTTGCTCGTGGCCTCTTCCAGATGCCCCCAGTTAGACTCAGCAACAGGTATTTTCTGGTGAGGGCTGGGGAGTCTGAATATGAGAGCTGGGGGGTGATTAACACGAACCCGGTTGCGAAAACTTCTGTTGATAGCGGGTTGTCAGAGAGAGGGAAGAAGCAGGCGGTGAGGGCAGCTTTCGACTTGAAGGAAATGGGGGCTTGTGACACAAGCTGTTGGATTTGGCCTTCTATCACTCAGAGAGCTTACCAGACCGCAGAGATCATTGCATCGGTTAACGGGGTCACTCGAAGTAACATTGTCCCAGAGTATAGCTTTCTAGATGCCCGTGGCTTAGGAGCTTATGAAGGAAAGAACCTAGAAGCTGTTTCAGAAGTATATGCATCTGATACTATTTCTCCAAGAATCAAGCCTCCTCCAATTGATGATGGAACCCCGAATGAGAGTGTCTCTGATGTGTTTGTTCGGGTGGTACAGCTCATGTCCATACTCGAGACTCAATACTCTGAAGACACAGTAATAATTGTCTCGCCAGATTCAGACAATTTAACAATCCTACAAGCTGGTATAGTTGGACTTGACTTGCGAAGGGATTTTGGGTGGCAGCAAAGATATGCTCGTTTCTGTGGGAGAGTAGTGGTTCTTTCAATTCTTTCTCTGCTACTCTATCCATTTCTTTGGGCTTGGACAGTCATTGGGACTCTGTGGTTTAGAAGCTCGAAGGACTGTTTGCCTAAAGATGGACAGAAATGGGGCTTTCTTATTTGGTTGCTTTTTAGTTACTGTGCACTACTTTGCATTTCGTGCATGTCACTTGGGAAGTGGTTGACACGAAGACAGGCACACTTAGTGCGTGCTCAACAAGGGATTCCTGTATCAGAGTATGGGGTTTTGGTTGATATGATCCGGGTGCCAGATTGGGCATTTGAAGCTGCAGGTCAAGAGGCAAGAGGAATGGGTCAAGAAGCTGCATACCAACCTGGACTTTACTTGACAACAGCACAGAGAGAAGCAGTGGAGGCACTCATTCAGGAGCTTCCAAAGTTCAGGTTGAAGGCTGTTCCAACTGATTGCAGTGAATGTCCAATCTGCTTAGAAGAGTTCTATGAAGGCAATGAGGTTCGCGGCCTACCTTGCGCTCACAATTTCCATGTAGAATGCATCGATGAGTGGCTTCGATTGAATGTGAAATGTCCTCGGTGCCGTTGCTCAGTCTTTCCGAATCTCGACCTCAGTGCTATTTCTACTCTCCGAGCTGAGTCTGAACGGTCATCTGTCATGTTGACTGCTAACCGGTATGTGAGAACCCAACCATCAAGTCAGAGCTATATGCTGAGATTGCAGGGTTTGCTCCACCCAGTCCATACAGAAACTGCAAGCAATGGAGCGGACACTGCTGAGAATGGGGGTGTTGCCATGTCTAGCCGGGATCCATCAAGCCCAGGACAGGTCCCTTCTGTTGGACATGTTAATAGTTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009743 GO:0009756 GO:0009987 GO:0010033 GO:0010182 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0023052 GO:0030163 GO:0032446 GO:0036211 GO:0042221 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0051716 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0070887 GO:0071310 GO:0071322 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

598

Amino Acids

66.36

Weight (kDa)

5.91

Isoelectric Point (pI)

51.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
His_Phos_1	PF00300	123 - 300	8.9e-15	Histidine phosphatase superfamily (branch 1)
zf-RING_2	PF13639	465 - 507	2.4e-14	Ring finger domain
zf-RING_11	PF17123	465 - 493	6.9e-10	RING-like zinc finger
zf-C3HC4_2	PF13923	465 - 506	9.1e-10	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	466 - 506	9.6e-08	Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX	PF13445	466 - 504	1.3e-07	RING-type zinc-finger
zf-rbx1	PF12678	466 - 507	3.1e-06	RING-H2 zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0012122)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62840 AT5G62840
fragaria_vesca	FvH4_5g05200 FvH4_5g05200 FvH4_5g05200
malus_domestica	MD14G1182500.v1.1
prunus_persica	Prupe.5G175000_v2.0.a1 Prupe.5G175000_v2.0.a1 Prupe.5G175000_v2.0.a1
pyrus_communis	pycom14g15160
rosa_chinensis	RchiOBHm_Chr7g0193711
rosa_laevigata	RLG00000004249
rosa_roxburghii	Rroxscaffold_3G00261880
rosa_rugosa	Rorug07G0011400
rosa_samantha	Rh7AG138300 Rh7BG138500 Rh7CG142100 Rh7DG139600
rosa_wichuraiana	Rw7G011780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1241
AccB1I	GGYRCC	2 cut(s)	1225, 1515
AccB7I	CCANNNNNTGG	1 cut(s)	45
AccBSI	CCGCTC	1 cut(s)	1703
AccII	CGCG	1 cut(s)	1440
AciI	CCGC	9 cut(s)	125, 238, 241, 270, 450, 479, 570, 1440, 1703
AclWI	GGATC	3 cut(s)	1213, 1739, 1752
AcuI	CTGAAG	1 cut(s)	843
AdeI	CACNNNGTG	1 cut(s)	1165
AfaI	GTAC	2 cut(s)	303, 789
AfiI	CCNNNNNNNGG	4 cut(s)	45, 1055, 1762, 1775
AflIII	ACRYGT	1 cut(s)	1780
AgeI	ACCGGT	1 cut(s)	1608
AgsI	TTSAA	5 cut(s)	502, 963, 1244, 1369, 1498
AhdI	GACNNNNNGTC	1 cut(s)	295
AjnI	CCWGG	2 cut(s)	1294, 1756
Alw21I	GWGCWC	2 cut(s)	1105, 1174
Alw26I	GTCTC	3 cut(s)	769, 803, 847
Alw44I	GTGCAC	1 cut(s)	1101
AlwI	GGATC	3 cut(s)	1213, 1739, 1752
AlwNI	CAGNNNCTG	1 cut(s)	1688
Ama87I	CYCGRG	1 cut(s)	806
AoxI	GGCC	3 cut(s)	325, 539, 1441
ApaLI	GTGCAC	1 cut(s)	1101
ApeKI	GCWGC	6 cut(s)	254, 272, 488, 919, 1247, 1283
AsiGI	ACCGGT	1 cut(s)	1608
AspLEI	GCGC	1 cut(s)	1454
AspS9I	GGNCC	2 cut(s)	36, 1765
AsuC2I	CCSGG	3 cut(s)	425, 1223, 1742
AsuHPI	GGTGA	4 cut(s)	253, 385, 421, 493
AvaI	CYCGRG	1 cut(s)	806
AvaII	GGWCC	2 cut(s)	36, 1765
BaeGI	GKGCMC	1 cut(s)	1105
BamHI	GGATCC	1 cut(s)	1744
BanI	GGYRCC	2 cut(s)	1225, 1515
BauI	CACGAG	1 cut(s)	321
BbsI	GAAGAC	3 cut(s)	111, 831, 1156
Bbv12I	GWGCWC	2 cut(s)	1105, 1174
BbvI	GCAGC	6 cut(s)	241, 284, 500, 931, 1234, 1270
BccI	CCATC	7 cut(s)	47, 199, 239, 737, 1049, 1636, 1756
BceAI	ACGGC	2 cut(s)	38, 1503
BcgI	CGANNNNNNTGC	2 cut(s)	1532, 1566
BciT130I	CCWGG	2 cut(s)	1296, 1758
BcnI	CCSGG	3 cut(s)	425, 1223, 1742
BcoDI	GTCTC	3 cut(s)	769, 803, 847
BfaI	CTAG	3 cut(s)	635, 674, 1737
BfmI	CTRYAG	1 cut(s)	1248
BfuAI	ACCTGC	1 cut(s)	1241
BisI	GCNGC	9 cut(s)	238, 241, 255, 273, 489, 920, 1248, 1284, 1441
BlsI	GCNGC	9 cut(s)	239, 242, 256, 274, 490, 921, 1249, 1285, 1442
Bme1390I	CCNGG	5 cut(s)	425, 1223, 1296, 1742, 1758
Bme18I	GGWCC	2 cut(s)	36, 1765
BmeRI	GACNNNNNGTC	1 cut(s)	295
BmeT110I	CYCGRG	1 cut(s)	806
BmgT120I	GGNCC	2 cut(s)	36, 1765
BmiI	GGNNCC	5 cut(s)	748, 1227, 1517, 1746, 1767
BmrFI	CCNGG	5 cut(s)	425, 1223, 1296, 1742, 1758
BmrI	ACTGGG	2 cut(s)	338, 1667
BmsI	GCATC	5 cut(s)	327, 593, 628, 707, 1485
BmuI	ACTGGG	2 cut(s)	338, 1667
BpiI	GAAGAC	3 cut(s)	111, 831, 1156
BplI	GAGNNNNNCTC	2 cut(s)	749, 781
Bpu10I	CCTNAGC	1 cut(s)	649
BpuMI	CCSGG	3 cut(s)	425, 1223, 1742
Bsa29I	ATCGAT	1 cut(s)	1479
BsaJI	CCNNGG	3 cut(s)	643, 1511, 1756
BsaWI	WCCGGW	1 cut(s)	1608
BsaXI	ACNNNNNCTCC	4 cut(s)	51, 81, 697, 727
Bsc4I	CCNNNNNNNGG	4 cut(s)	45, 1055, 1762, 1775
Bse118I	RCCGGY	1 cut(s)	1608
Bse1I	ACTGG	2 cut(s)	344, 1673
Bse3DI	GCAATG	3 cut(s)	579, 1435, 1702
BseBI	CCWGG	2 cut(s)	1296, 1758
BseCI	ATCGAT	1 cut(s)	1479
BseDI	CCNNGG	3 cut(s)	643, 1511, 1756
BseLI	CCNNNNNNNGG	4 cut(s)	45, 1055, 1762, 1775
BseMI	GCAATG	3 cut(s)	579, 1435, 1702
BseMII	CTCAG	8 cut(s)	123, 367, 566, 1539, 1561, 1563, 1640, 1704
BseNI	ACTGG	2 cut(s)	344, 1673
BseRI	GAGGAG	2 cut(s)	159, 720
BseSI	GKGCMC	1 cut(s)	1105
BseXI	GCAGC	6 cut(s)	241, 284, 500, 931, 1234, 1270
BseYI	CCCAGC	2 cut(s)	380, 402
Bsh1236I	CGCG	1 cut(s)	1440
BshFI	GGCC	3 cut(s)	327, 541, 1443
BshNI	GGYRCC	2 cut(s)	1225, 1515
BshTI	ACCGGT	1 cut(s)	1608
BshVI	ATCGAT	1 cut(s)	1479
BsiHKAI	GWGCWC	2 cut(s)	1105, 1174
BsiHKCI	CYCGRG	1 cut(s)	806
BsiSI	CCGG	4 cut(s)	425, 1222, 1609, 1741
BslFI	GGGAC	3 cut(s)	602, 1027, 1751
BslI	CCNNNNNNNGG	4 cut(s)	45, 1055, 1762, 1775
BsmAI	GTCTC	3 cut(s)	769, 803, 847
BsmFI	GGGAC	3 cut(s)	602, 1027, 1751
BsmI	GAATGC	3 cut(s)	25, 221, 1478
BsnI	GGCC	3 cut(s)	327, 541, 1443
BsoBI	CYCGRG	1 cut(s)	806
Bsp1286I	GDGCHC	2 cut(s)	1105, 1174
Bsp143I	GATC	3 cut(s)	576, 1218, 1744
BspACI	CCGC	9 cut(s)	125, 238, 241, 270, 450, 479, 570, 1440, 1703
BspANI	GGCC	3 cut(s)	327, 541, 1443
BspCNI	CTCAG	8 cut(s)	122, 366, 565, 1538, 1560, 1564, 1641, 1705
BspDI	ATCGAT	1 cut(s)	1479
BspFNI	CGCG	1 cut(s)	1440
BspLI	GGNNCC	5 cut(s)	748, 1227, 1517, 1746, 1767
BspMAI	CTGCAG	1 cut(s)	1252
BspMI	ACCTGC	1 cut(s)	1241
BspPI	GGATC	3 cut(s)	1213, 1739, 1752
BspQI	GCTCTTC	1 cut(s)	72
BspT107I	GGYRCC	2 cut(s)	1225, 1515
BsrBI	CCGCTC	1 cut(s)	1703
BsrDI	GCAATG	3 cut(s)	579, 1435, 1702
BsrFI	RCCGGY	1 cut(s)	1608
BsrI	ACTGG	2 cut(s)	344, 1673
BssAI	RCCGGY	1 cut(s)	1608
BssECI	CCNNGG	3 cut(s)	643, 1511, 1756
BssMI	GATC	3 cut(s)	576, 1218, 1744
BssSI	CACGAG	1 cut(s)	321
Bst2BI	CACGAG	1 cut(s)	321
Bst2UI	CCWGG	2 cut(s)	1296, 1758
Bst4CI	ACNGT	5 cut(s)	832, 1006, 1043, 1100, 1584
Bst6I	CTCTTC	3 cut(s)	72, 335, 1407
BstAPI	GCANNNNNTGC	2 cut(s)	1119, 1663
BstC8I	GCNNGC	3 cut(s)	477, 1170, 1693
BstDSI	CCRYGG	1 cut(s)	643
BstFNI	CGCG	1 cut(s)	1440
BstHHI	GCGC	1 cut(s)	1454
BstKTI	GATC	3 cut(s)	579, 1221, 1747
BstMAI	GTCTC	3 cut(s)	769, 803, 847
BstMBI	GATC	3 cut(s)	576, 1218, 1744
BstMWI	GCNNNNNNNGC	9 cut(s)	281, 485, 1119, 1244, 1334, 1449, 1654, 1663, 1709
BstNI	CCWGG	2 cut(s)	1296, 1758
BstNSI	RCATGY	2 cut(s)	1126, 1784
BstSCI	CCNGG	5 cut(s)	423, 1221, 1294, 1740, 1756
BstSFI	CTRYAG	1 cut(s)	1248
BstSLI	GKGCMC	1 cut(s)	1105
BstUI	CGCG	1 cut(s)	1440
BstV1I	GCAGC	6 cut(s)	241, 284, 500, 931, 1234, 1270
BstV2I	GAAGAC	3 cut(s)	111, 831, 1156
BstX2I	RGATCY	1 cut(s)	1744
BstXI	CCANNNNNNTGG	1 cut(s)	993
BstYI	RGATCY	1 cut(s)	1744
Bsu15I	ATCGAT	1 cut(s)	1479
BsuRI	GGCC	3 cut(s)	327, 541, 1443
BsuTUI	ATCGAT	1 cut(s)	1479
BtgI	CCRYGG	1 cut(s)	643
BtsI	GCAGTG	3 cut(s)	1335, 1396, 1707
BtsIMutI	CAGTG	4 cut(s)	1335, 1396, 1555, 1707
BveI	ACCTGC	1 cut(s)	1241
Cac8I	GCNNGC	3 cut(s)	477, 1170, 1693
CaiI	CAGNNNCTG	1 cut(s)	1688
CfoI	GCGC	1 cut(s)	1454
Cfr10I	RCCGGY	1 cut(s)	1608
Cfr13I	GGNCC	2 cut(s)	36, 1765
ClaI	ATCGAT	1 cut(s)	1479
Csp6I	GTAC	2 cut(s)	302, 788
CspAI	ACCGGT	1 cut(s)	1608
CviAII	CATG	7 cut(s)	295, 796, 1123, 1466, 1594, 1732, 1781
CviQI	GTAC	2 cut(s)	302, 788
DpnI	GATC	3 cut(s)	578, 1220, 1746
DpnII	GATC	3 cut(s)	576, 1218, 1744
DraIII	CACNNNGTG	1 cut(s)	1165
DriI	GACNNNNNGTC	1 cut(s)	295
Eam1104I	CTCTTC	3 cut(s)	72, 335, 1407
Eam1105I	GACNNNNNGTC	1 cut(s)	295
EarI	CTCTTC	3 cut(s)	72, 335, 1407
Eco47I	GGWCC	2 cut(s)	36, 1765
Eco57I	CTGAAG	1 cut(s)	843
Eco88I	CYCGRG	1 cut(s)	806
EcoO109I	RGGNCCY	1 cut(s)	1765
EcoRII	CCWGG	2 cut(s)	1294, 1756
EcoT22I	ATGCAT	3 cut(s)	223, 700, 1478
FaeI	CATG	7 cut(s)	298, 799, 1126, 1469, 1597, 1735, 1784
FaqI	GGGAC	3 cut(s)	602, 1027, 1751
FatI	CATG	7 cut(s)	294, 795, 1122, 1465, 1593, 1731, 1780
FauI	CCCGC	2 cut(s)	132, 443
Fnu4HI	GCNGC	9 cut(s)	238, 241, 255, 273, 489, 920, 1248, 1284, 1441
Fsp4HI	GCNGC	9 cut(s)	238, 241, 255, 273, 489, 920, 1248, 1284, 1441
FspBI	CTAG	3 cut(s)	635, 674, 1737
GlaI	GCGC	1 cut(s)	1453
GluI	GCNGC	9 cut(s)	238, 241, 255, 273, 489, 920, 1248, 1284, 1441
GsaI	CCCAGC	2 cut(s)	384, 406
HaeIII	GGCC	3 cut(s)	327, 541, 1443
HapII	CCGG	4 cut(s)	425, 1222, 1609, 1741
HhaI	GCGC	1 cut(s)	1454
Hin1II	CATG	7 cut(s)	298, 799, 1126, 1469, 1597, 1735, 1784
Hin6I	GCGC	1 cut(s)	1452
HinP1I	GCGC	1 cut(s)	1452
HincII	GTYRAC	3 cut(s)	592, 1143, 1599
HindII	GTYRAC	3 cut(s)	592, 1143, 1599
HpaI	GTTAAC	1 cut(s)	592
HpaII	CCGG	4 cut(s)	425, 1222, 1609, 1741
HphI	GGTGA	4 cut(s)	253, 385, 421, 493
Hpy166II	GTNNAC	4 cut(s)	592, 1103, 1143, 1599
Hpy188III	TCNNGA	7 cut(s)	334, 635, 808, 1256, 1277, 1346, 1541
Hpy8I	GTNNAC	4 cut(s)	592, 1103, 1143, 1599
HpyAV	CCTTC	8 cut(s)	496, 552, 656, 897, 1030, 1363, 1418, 1779
HpyCH4III	ACNGT	5 cut(s)	832, 1006, 1043, 1100, 1584
HpyCH4IV	ACGT	1 cut(s)	246
HpyF10VI	GCNNNNNNNGC	9 cut(s)	281, 485, 1119, 1244, 1334, 1449, 1654, 1663, 1709
HpySE526I	ACGT	1 cut(s)	246
Hsp92II	CATG	7 cut(s)	298, 799, 1126, 1469, 1597, 1735, 1784
HspAI	GCGC	1 cut(s)	1452
KspAI	GTTAAC	1 cut(s)	592
Kzo9I	GATC	3 cut(s)	576, 1218, 1744
LguI	GCTCTTC	1 cut(s)	72
LmnI	GCTCC	4 cut(s)	653, 1348, 1671, 1700
Lsp1109I	GCAGC	6 cut(s)	241, 284, 500, 931, 1234, 1270
LweI	GCATC	5 cut(s)	327, 593, 628, 707, 1485
MaeI	CTAG	3 cut(s)	635, 674, 1737
MaeII	ACGT	1 cut(s)	246
MaeIII	GTNAC	6 cut(s)	139, 518, 598, 608, 1094, 1125
MalI	GATC	3 cut(s)	578, 1220, 1746
MbiI	CCGCTC	1 cut(s)	1703
MboI	GATC	3 cut(s)	576, 1218, 1744
MfeI	CAATTG	1 cut(s)	735
MflI	RGATCY	1 cut(s)	1744
MhlI	GDGCHC	2 cut(s)	1105, 1174
MluCI	AATT	5 cut(s)	735, 837, 859, 963, 1459
MlyI	GAGTC	6 cut(s)	101, 345, 395, 805, 1009, 1583
MmeI	TCCRAC	5 cut(s)	209, 512, 868, 1403, 1756
Mph1103I	ATGCAT	3 cut(s)	223, 700, 1478
MseI	TTAA	4 cut(s)	414, 591, 863, 1785
MspI	CCGG	4 cut(s)	425, 1222, 1609, 1741
MspR9I	CCNGG	5 cut(s)	425, 1223, 1296, 1742, 1758
MunI	CAATTG	1 cut(s)	735
Mva1269I	GAATGC	3 cut(s)	25, 221, 1478
MvaI	CCWGG	2 cut(s)	1296, 1758
MvnI	CGCG	1 cut(s)	1440
MwoI	GCNNNNNNNGC	9 cut(s)	281, 485, 1119, 1244, 1334, 1449, 1654, 1663, 1709
NciI	CCSGG	3 cut(s)	425, 1223, 1742
NdeII	GATC	3 cut(s)	576, 1218, 1744
NlaIII	CATG	7 cut(s)	298, 799, 1126, 1469, 1597, 1735, 1784
NlaIV	GGNNCC	5 cut(s)	748, 1227, 1517, 1746, 1767
NmuCI	GTSAC	3 cut(s)	518, 598, 1125
NsiI	ATGCAT	3 cut(s)	223, 700, 1478
NspI	RCATGY	2 cut(s)	1126, 1784
PaeR7I	CTCGAG	1 cut(s)	806
PciI	ACATGT	1 cut(s)	1780
PciSI	GCTCTTC	1 cut(s)	72
PctI	GAATGC	3 cut(s)	25, 221, 1478
PfeI	GAWTC	4 cut(s)	720, 851, 1183, 1537
PflMI	CCANNNNNTGG	1 cut(s)	45
PinAI	ACCGGT	1 cut(s)	1608
PkrI	GCNGC	9 cut(s)	239, 242, 256, 274, 490, 921, 1249, 1285, 1442
PleI	GAGTC	6 cut(s)	101, 345, 394, 805, 1009, 1582
PpsI	GAGTC	6 cut(s)	101, 345, 394, 805, 1009, 1582
PpuMI	RGGWCCY	1 cut(s)	1765
PscI	ACATGT	1 cut(s)	1780
Psp5II	RGGWCCY	1 cut(s)	1765
Psp6I	CCWGG	2 cut(s)	1294, 1756
PspFI	CCCAGC	2 cut(s)	380, 402
PspGI	CCWGG	2 cut(s)	1294, 1756
PspN4I	GGNNCC	5 cut(s)	748, 1227, 1517, 1746, 1767
PspPI	GGNCC	2 cut(s)	36, 1765
PspPPI	RGGWCCY	1 cut(s)	1765
PstI	CTGCAG	1 cut(s)	1252
PstNI	CAGNNNCTG	1 cut(s)	1688
PsuI	RGATCY	1 cut(s)	1744
RsaI	GTAC	2 cut(s)	303, 789
RsaNI	GTAC	2 cut(s)	302, 788
SapI	GCTCTTC	1 cut(s)	72
SaqAI	TTAA	4 cut(s)	414, 591, 863, 1785
SatI	GCNGC	9 cut(s)	238, 241, 255, 273, 489, 920, 1248, 1284, 1441
Sau3AI	GATC	3 cut(s)	576, 1218, 1744
Sau96I	GGNCC	2 cut(s)	36, 1765
SchI	GAGTC	6 cut(s)	101, 345, 395, 805, 1009, 1583
ScrFI	CCNGG	5 cut(s)	425, 1223, 1296, 1742, 1758
SduI	GDGCHC	2 cut(s)	1105, 1174
SfaNI	GCATC	5 cut(s)	327, 593, 628, 707, 1485
SfcI	CTRYAG	1 cut(s)	1248
Sfr274I	CTCGAG	1 cut(s)	806
SinI	GGWCC	2 cut(s)	36, 1765
SlaI	CTCGAG	1 cut(s)	806
SmlI	CTYRAG	1 cut(s)	806
SmoI	CTYRAG	1 cut(s)	806
Sse9I	AATT	5 cut(s)	735, 837, 859, 963, 1459
SsiI	CCGC	9 cut(s)	125, 238, 241, 270, 450, 479, 570, 1440, 1703
SspMI	CTAG	3 cut(s)	635, 674, 1737
StyD4I	CCNGG	5 cut(s)	423, 1221, 1294, 1740, 1756
TaaI	ACNGT	5 cut(s)	832, 1006, 1043, 1100, 1584
TaiI	ACGT	1 cut(s)	249
TaqI	TCGA	8 cut(s)	288, 495, 604, 807, 1034, 1479, 1492, 1542
TasI	AATT	5 cut(s)	735, 837, 859, 963, 1459
TauI	GCSGC	3 cut(s)	240, 243, 1443
TfiI	GAWTC	4 cut(s)	720, 851, 1183, 1537
Tru1I	TTAA	4 cut(s)	414, 591, 863, 1785
Tru9I	TTAA	4 cut(s)	414, 591, 863, 1785
TscAI	CASTG	4 cut(s)	1335, 1396, 1555, 1714
TseFI	GTSAC	3 cut(s)	518, 598, 1125
TseI	GCWGC	6 cut(s)	254, 272, 488, 919, 1247, 1283
Tsp45I	GTSAC	3 cut(s)	518, 598, 1125
TspDTI	ATGAA	4 cut(s)	78, 167, 675, 1437
TspGWI	ACGGA	2 cut(s)	19, 289
TspRI	CASTG	4 cut(s)	1335, 1396, 1555, 1714
Van91I	CCANNNNNTGG	1 cut(s)	45
VneI	GTGCAC	1 cut(s)	1101
VpaK11BI	GGWCC	2 cut(s)	36, 1765
XbaI	TCTAGA	1 cut(s)	634
XceI	RCATGY	2 cut(s)	1126, 1784
XhoI	CTCGAG	1 cut(s)	806
XspI	CTAG	3 cut(s)	635, 674, 1737
Zsp2I	ATGCAT	3 cut(s)	223, 700, 1478

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.