Prupe.5G178300_v2.0.a1

Calmodulin binding protein-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
15043774 .. 15048233
4460 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G178300.8

Sequence Viewer

Length: 1710 bp
ATGTCGCAGAAGAGACACCAAGAAGATGGTAAGGGTCGATCAGAAGGGACTGGCAGTCCTGAGGACAAACGCAGAAGGCTTCCTACTTTTCACAATGCGGTTCTGGAAATGATGAAGTTGAACACAGTCCAGCATTTACTGGAGCCAATTCTAGAGCCTTTGATTCGGAAAGTTGTTAAAGAGGAAGTTGAGTTGGCCCTAAGAAAGCATTTGACCAATATGAAACAGAATTGTGGGAAAGAAACACATCCTTCTGAATCAAGAATCTTAAAGCTACAGTTCTTAAATAATCTTTCTCTTCCGGTATTTACTGGAGCTCGAATTGAAGGAGAAGAATGCTCCACTATACAAGTAGCTTTGGTTGATTGCTTTACTGGGCATGTTGTTAAATCTGGGCCTGAATCGTCAGCCAAGGTGGAAATAGTTGTGCTTGAGGGTGATTTTGATGGTGATGAGGGTGACAATTGGACACTTGAAGAGTTCAAGAATAACATTGTAAGAGAGAGAGAAGGAAAGAAACCTCTTCTTACAGGAGATGCAGTCCTGAATTTTAAAGATGGAGTTGGTCTTGTGGGTGAGATTTCTTTTACAGATAATTCAAGCTGGACGAGGAGCCGTAGGTTCAGGCTAGGAGCAAGAGTTTTAGATAAATTTGATGGAACTAGAATAAAAGAAGCAAAGACAGAATCATTTATTGTCAGGGATCACCGTGGAGAATTGTACAAGAAACACCACCCACCATCTCTGCTTGATGAGGTGTGGAGACTAGAAAAGATTGGCAAGGACGGAGCTTTCCATAAGCGTTTGAGTCGGGAAAACATCAACACTGTGAAGGATTTTCTCACCCTACTCTTCATAGACTCTTCAAGGCTTCGGAATATCCTTGGCACGGGTATGTCTGCTAAGATGTGGGAAGTCACAGTCGAGCATGCGCAGACATGTATACTTGATAAGAGGATGTACTTGTACTGCCCTCCCAGTTCACAGCAGAGAACCGGTGTGGTCTTCAACATTGTGGGGCAAGTGATGGGACTACTTTTGGAATGTGAATTCATTCCTATTAGTAAGCTGTCTGAAGCACAAAAGGCTGATGGCCAGAAGTTGGTAATTTCTGCCTTCGAACACTGGGAAGAAGTAATCCCATTTGATGATGAAGCCTCTCTTAGAGGTGCTTCTTCAAACTTTACCAGTGCTCTTCACACATCGACCTCACCAAGGGCAGATGATCCTGATGGAAGCAAGTTTTTGGCTTCTCAAAAGGTTGGTGGATTTGATTATCCACACCCATCTGTCTCTTCTCCAGATATCATCTCATCCATCTATTCTGTGGGGAGCACCAGTGGCTTGGATGATTATCCCTTGCACAACATTGATGGCCTGGGTCTTAGATACGACCAGACTTTGAGTTTCCCAGGTCAAGTCACCAACTCCCTGATCTGTGACACCGATCCCATGGCTCATGCTTTATTTGATGAGGATAATCTACAGTTTTTTGATGCTGATCTTCATTCCCAGAACATAATTTCAGAATCACAAGCTGATCTACAAAGCGCTGTAGATGGCTTCTTGTTGACGCGTTCCACAGCTGTTGCCATATCTGATAAAGCTCAGAGGAGATGGACAAAGCTATTCAGTGTGCTGAAGTGGTTCTCAATTAGGAGGAGTGTGGCTCTGAAACGAAGTCGAGTTCGAGAAATTCAAAGATATTAG

Protein Analysis

570

Amino Acids

64.07

Weight (kDa)

6.31

Isoelectric Point (pI)

49.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 933
AccB7I CCANNNNNTGG 1 cut(s) 1102
AccI GTMKAC 1 cut(s) 943
AccII CGCG 1 cut(s) 1576
AciI CCGC 1 cut(s) 98
AclWI GGATC 3 cut(s) 711, 1220, 1442
AcoI YGGCCR 1 cut(s) 1093
AcsI RAATTY 4 cut(s) 547, 650, 1049, 1695
AcuI CTGAAG 2 cut(s) 1095, 1661
AfaI GTAC 3 cut(s) 722, 962, 968
AfeI AGCGCT 1 cut(s) 1552
AfiI CCNNNNNNNGG 3 cut(s) 889, 1102, 1215
AflIII ACRYGT 2 cut(s) 938, 1574
AgeI ACCGGT 1 cut(s) 995
AgsI TTSAA 9 cut(s) 121, 326, 476, 484, 600, 867, 1009, 1179, 1700
AhdI GACNNNNNGTC 1 cut(s) 54
AjnI CCWGG 2 cut(s) 1377, 1411
Alw21I GWGCWC 3 cut(s) 319, 1195, 1337
Alw26I GTCTC 3 cut(s) 7, 757, 1297
AlwI GGATC 3 cut(s) 711, 1220, 1442
Aor51HI AGCGCT 1 cut(s) 1552
AoxI GGCC 4 cut(s) 195, 395, 1093, 1375
ApoI RAATTY 4 cut(s) 547, 650, 1049, 1695
AsiGI ACCGGT 1 cut(s) 995
Asp700I GAANNNNTTC 2 cut(s) 1053, 1646
AspLEI GCGC 2 cut(s) 934, 1553
AspS9I GGNCC 2 cut(s) 196, 395
AsuHPI GGTGA 8 cut(s) 449, 461, 470, 587, 698, 835, 1203, 1414
AsuII TTCGAA 1 cut(s) 1119
AxyI CCTNAGG 1 cut(s) 60
BalI TGGCCA 1 cut(s) 1095
BanII GRGCYC 1 cut(s) 319
BarI GAAGNNNNNNTAC 2 cut(s) 67, 99
BbsI GAAGAC 1 cut(s) 997
Bbv12I GWGCWC 3 cut(s) 319, 1195, 1337
BceAI ACGGC 1 cut(s) 600
BciT130I CCWGG 2 cut(s) 1379, 1413
BcoDI GTCTC 3 cut(s) 7, 757, 1297
BfaI CTAG 4 cut(s) 152, 629, 663, 767
BfmI CTRYAG 3 cut(s) 275, 1484, 1554
BfoI RGCGCY 1 cut(s) 1554
Bme1390I CCNGG 2 cut(s) 1379, 1413
BmeRI GACNNNNNGTC 1 cut(s) 54
BmgT120I GGNCC 2 cut(s) 196, 395
BmiI GGNNCC 2 cut(s) 144, 614
BmrFI CCNGG 2 cut(s) 1379, 1413
BmrI ACTGGG 3 cut(s) 384, 972, 1135
BmsI GCATC 2 cut(s) 526, 1486
BmuI ACTGGG 3 cut(s) 384, 972, 1135
BpiI GAAGAC 1 cut(s) 997
BplI GAGNNNNNCTC 2 cut(s) 1654, 1686
BpmI CTGGAG 3 cut(s) 161, 333, 1284
Bpu14I TTCGAA 1 cut(s) 1119
BpuEI CTTGAG 1 cut(s) 452
BsaBI GATNNNNATC 2 cut(s) 1353, 1500
BsaJI CCNNGG 7 cut(s) 411, 709, 883, 1214, 1378, 1411, 1452
BsaWI WCCGGW 2 cut(s) 301, 995
BsaXI ACNNNNNCTCC 6 cut(s) 525, 555, 624, 654, 1324, 1354
Bsc4I CCNNNNNNNGG 3 cut(s) 889, 1102, 1215
Bse118I RCCGGY 1 cut(s) 995
Bse1I ACTGG 8 cut(s) 55, 144, 316, 379, 978, 1130, 1188, 1338
Bse21I CCTNAGG 1 cut(s) 60
Bse8I GATNNNNATC 2 cut(s) 1353, 1500
BseBI CCWGG 2 cut(s) 1379, 1413
BseDI CCNNGG 7 cut(s) 411, 709, 883, 1214, 1378, 1411, 1452
BseGI GGATG 4 cut(s) 247, 963, 1313, 1354
BseJI GATNNNNATC 2 cut(s) 1353, 1500
BseLI CCNNNNNNNGG 3 cut(s) 889, 1102, 1215
BseMII CTCAG 2 cut(s) 51, 1622
BseNI ACTGG 8 cut(s) 55, 144, 316, 379, 978, 1130, 1188, 1338
BseRI GAGGAG 3 cut(s) 625, 1627, 1675
Bsh1236I CGCG 1 cut(s) 1576
BshFI GGCC 4 cut(s) 197, 397, 1095, 1377
BshTI ACCGGT 1 cut(s) 995
BsiHKAI GWGCWC 3 cut(s) 319, 1195, 1337
BsiSI CCGG 2 cut(s) 302, 996
BslFI GGGAC 2 cut(s) 61, 1044
BslI CCNNNNNNNGG 3 cut(s) 889, 1102, 1215
BsmAI GTCTC 3 cut(s) 7, 757, 1297
BsmFI GGGAC 2 cut(s) 61, 1044
BsmI GAATGC 1 cut(s) 341
BsnI GGCC 4 cut(s) 197, 397, 1095, 1377
Bsp119I TTCGAA 1 cut(s) 1119
Bsp1286I GDGCHC 3 cut(s) 319, 1195, 1337
Bsp1407I TGTACA 1 cut(s) 720
Bsp143I GATC 7 cut(s) 38, 703, 1225, 1434, 1447, 1501, 1540
Bsp19I CCATGG 1 cut(s) 1452
BspACI CCGC 1 cut(s) 98
BspANI GGCC 4 cut(s) 197, 397, 1095, 1377
BspCNI CTCAG 2 cut(s) 52, 1621
BspFNI CGCG 1 cut(s) 1576
BspLI GGNNCC 2 cut(s) 144, 614
BspPI GGATC 3 cut(s) 711, 1220, 1442
BspQI GCTCTTC 1 cut(s) 1200
BspT104I TTCGAA 1 cut(s) 1119
BsrFI RCCGGY 1 cut(s) 995
BsrGI TGTACA 1 cut(s) 720
BsrI ACTGG 8 cut(s) 55, 144, 316, 379, 978, 1130, 1188, 1338
BssAI RCCGGY 1 cut(s) 995
BssECI CCNNGG 7 cut(s) 411, 709, 883, 1214, 1378, 1411, 1452
BssMI GATC 7 cut(s) 38, 703, 1225, 1434, 1447, 1501, 1540
BssNAI GTATAC 1 cut(s) 944
BssT1I CCWWGG 4 cut(s) 411, 883, 1214, 1452
Bst1107I GTATAC 1 cut(s) 944
Bst2UI CCWGG 2 cut(s) 1379, 1413
Bst4CI ACNGT 6 cut(s) 127, 279, 710, 829, 922, 1488
Bst6I CTCTTC 8 cut(s) 5, 303, 471, 528, 857, 868, 1200, 1300
BstAUI TGTACA 1 cut(s) 720
BstBI TTCGAA 1 cut(s) 1119
BstC8I GCNNGC 1 cut(s) 930
BstDEI CTNAG 6 cut(s) 60, 200, 903, 1163, 1385, 1608
BstDSI CCRYGG 2 cut(s) 709, 1452
BstENI CCTNNNNNAGG 1 cut(s) 1213
BstF5I GGATG 4 cut(s) 247, 963, 1313, 1354
BstFNI CGCG 1 cut(s) 1576
BstH2I RGCGCY 1 cut(s) 1554
BstHHI GCGC 2 cut(s) 934, 1553
BstKTI GATC 7 cut(s) 41, 706, 1228, 1437, 1450, 1504, 1543
BstMAI GTCTC 3 cut(s) 7, 757, 1297
BstMBI GATC 7 cut(s) 38, 703, 1225, 1434, 1447, 1501, 1540
BstMWI GCNNNNNNNGC 2 cut(s) 1085, 1341
BstNI CCWGG 2 cut(s) 1379, 1413
BstNSI RCATGY 3 cut(s) 383, 932, 942
BstSCI CCNGG 2 cut(s) 1377, 1411
BstSFI CTRYAG 3 cut(s) 275, 1484, 1554
BstUI CGCG 1 cut(s) 1576
BstV2I GAAGAC 1 cut(s) 997
BstXI CCANNNNNNTGG 2 cut(s) 26, 1345
BstZ17I GTATAC 1 cut(s) 944
Bsu36I CCTNAGG 1 cut(s) 60
BsuRI GGCC 4 cut(s) 197, 397, 1095, 1377
BtgI CCRYGG 2 cut(s) 709, 1452
BtsCI GGATG 4 cut(s) 247, 963, 1313, 1354
BtsIMutI CAGTG 5 cut(s) 825, 1123, 1195, 1345, 1639
Cac8I GCNNGC 1 cut(s) 930
CfoI GCGC 2 cut(s) 934, 1553
Cfr10I RCCGGY 1 cut(s) 995
Cfr13I GGNCC 2 cut(s) 196, 395
CseI GACGC 1 cut(s) 1582
Csp6I GTAC 3 cut(s) 721, 961, 967
CspAI ACCGGT 1 cut(s) 995
CspCI CAANNNNNGTGG 2 cut(s) 1570, 1605
CviAII CATG 5 cut(s) 380, 929, 939, 1453, 1460
CviQI GTAC 3 cut(s) 721, 961, 967
DdeI CTNAG 6 cut(s) 60, 200, 903, 1163, 1385, 1608
DpnI GATC 7 cut(s) 40, 705, 1227, 1436, 1449, 1503, 1542
DpnII GATC 7 cut(s) 38, 703, 1225, 1434, 1447, 1501, 1540
DraI TTTAAA 1 cut(s) 553
DriI GACNNNNNGTC 1 cut(s) 54
EaeI YGGCCR 1 cut(s) 1093
Eam1104I CTCTTC 8 cut(s) 5, 303, 471, 528, 857, 868, 1200, 1300
Eam1105I GACNNNNNGTC 1 cut(s) 54
EarI CTCTTC 8 cut(s) 5, 303, 471, 528, 857, 868, 1200, 1300
Ecl136II GAGCTC 1 cut(s) 317
Eco130I CCWWGG 4 cut(s) 411, 883, 1214, 1452
Eco24I GRGCYC 1 cut(s) 319
Eco32I GATATC 1 cut(s) 1306
Eco47III AGCGCT 1 cut(s) 1552
Eco53kI GAGCTC 1 cut(s) 317
Eco57I CTGAAG 2 cut(s) 1095, 1661
Eco81I CCTNAGG 1 cut(s) 60
EcoICRI GAGCTC 1 cut(s) 317
EcoNI CCTNNNNNAGG 1 cut(s) 1213
EcoRI GAATTC 1 cut(s) 1049
EcoRII CCWGG 2 cut(s) 1377, 1411
EcoRV GATATC 1 cut(s) 1306
EcoT14I CCWWGG 4 cut(s) 411, 883, 1214, 1452
EcoT38I GRGCYC 1 cut(s) 319
ErhI CCWWGG 4 cut(s) 411, 883, 1214, 1452
FaeI CATG 5 cut(s) 383, 932, 942, 1456, 1463
FalI AAGNNNNNCTT 2 cut(s) 1146, 1178
FaqI GGGAC 2 cut(s) 61, 1044
FatI CATG 5 cut(s) 379, 928, 938, 1452, 1459
FblI GTMKAC 1 cut(s) 943
FokI GGATG 4 cut(s) 234, 970, 1300, 1361
FriOI GRGCYC 1 cut(s) 319
FspBI CTAG 4 cut(s) 152, 629, 663, 767
FspI TGCGCA 1 cut(s) 933
GlaI GCGC 2 cut(s) 933, 1552
GsuI CTGGAG 3 cut(s) 161, 333, 1284
HaeII RGCGCY 1 cut(s) 1554
HaeIII GGCC 4 cut(s) 197, 397, 1095, 1377
HapII CCGG 2 cut(s) 302, 996
HgaI GACGC 1 cut(s) 1582
HhaI GCGC 2 cut(s) 934, 1553
Hin1II CATG 5 cut(s) 383, 932, 942, 1456, 1463
Hin6I GCGC 2 cut(s) 932, 1551
HinP1I GCGC 2 cut(s) 932, 1551
HincII GTYRAC 1 cut(s) 1572
HindII GTYRAC 1 cut(s) 1572
HinfI GANTC 8 cut(s) 163, 257, 264, 401, 686, 808, 860, 1529
HpaII CCGG 2 cut(s) 302, 996
HphI GGTGA 8 cut(s) 449, 461, 470, 587, 698, 835, 1203, 1414
Hpy166II GTNNAC 3 cut(s) 944, 983, 1572
Hpy188I TCNGA 9 cut(s) 43, 168, 256, 876, 1075, 1528, 1600, 1611, 1674
Hpy8I GTNNAC 3 cut(s) 944, 983, 1572
HpyAV CCTTC 7 cut(s) 38, 69, 261, 320, 503, 826, 1126
HpyCH4III ACNGT 6 cut(s) 127, 279, 710, 829, 922, 1488
HpyCH4V TGCA 2 cut(s) 539, 1363
HpyF10VI GCNNNNNNNGC 2 cut(s) 1085, 1341
HpyF3I CTNAG 6 cut(s) 60, 200, 903, 1163, 1385, 1608
Hsp92II CATG 5 cut(s) 383, 932, 942, 1456, 1463
HspAI GCGC 2 cut(s) 932, 1551
Kzo9I GATC 7 cut(s) 38, 703, 1225, 1434, 1447, 1501, 1540
LguI GCTCTTC 1 cut(s) 1200
LmnI GCTCC 7 cut(s) 142, 314, 344, 612, 632, 788, 1332
LweI GCATC 2 cut(s) 526, 1486
MaeI CTAG 4 cut(s) 152, 629, 663, 767
MaeIII GTNAC 4 cut(s) 458, 916, 1420, 1439
MalI GATC 7 cut(s) 40, 705, 1227, 1436, 1449, 1503, 1542
MboI GATC 7 cut(s) 38, 703, 1225, 1434, 1447, 1501, 1540
MfeI CAATTG 1 cut(s) 463
MhlI GDGCHC 3 cut(s) 319, 1195, 1337
MlsI TGGCCA 1 cut(s) 1095
MluI ACGCGT 1 cut(s) 1574
MluNI TGGCCA 1 cut(s) 1095
MlyI GAGTC 2 cut(s) 817, 854
Mox20I TGGCCA 1 cut(s) 1095
MroXI GAANNNNTTC 2 cut(s) 1053, 1646
MscI TGGCCA 1 cut(s) 1095
MseI TTAA 5 cut(s) 177, 269, 284, 387, 552
MslI CAYNNNNRTG 1 cut(s) 893
Msp20I TGGCCA 1 cut(s) 1095
MspA1I CMGCKG 1 cut(s) 1586
MspI CCGG 2 cut(s) 302, 996
MspR9I CCNGG 2 cut(s) 1379, 1413
MunI CAATTG 1 cut(s) 463
Mva1269I GAATGC 1 cut(s) 341
MvaI CCWGG 2 cut(s) 1379, 1413
MvnI CGCG 1 cut(s) 1576
MwoI GCNNNNNNNGC 2 cut(s) 1085, 1341
NcoI CCATGG 1 cut(s) 1452
NdeII GATC 7 cut(s) 38, 703, 1225, 1434, 1447, 1501, 1540
NlaIII CATG 5 cut(s) 383, 932, 942, 1456, 1463
NlaIV GGNNCC 2 cut(s) 144, 614
NmuCI GTSAC 4 cut(s) 458, 916, 1420, 1439
NsbI TGCGCA 1 cut(s) 933
NspI RCATGY 3 cut(s) 383, 932, 942
NspV TTCGAA 1 cut(s) 1119
PaeI GCATGC 1 cut(s) 932
PciI ACATGT 1 cut(s) 938
PciSI GCTCTTC 1 cut(s) 1200
PctI GAATGC 1 cut(s) 341
PdmI GAANNNNTTC 2 cut(s) 1053, 1646
PfeI GAWTC 6 cut(s) 163, 257, 264, 401, 686, 1529
PflMI CCANNNNNTGG 1 cut(s) 1102
PinAI ACCGGT 1 cut(s) 995
PleI GAGTC 2 cut(s) 816, 854
PpsI GAGTC 2 cut(s) 816, 854
PscI ACATGT 1 cut(s) 938
Psp124BI GAGCTC 1 cut(s) 319
Psp6I CCWGG 2 cut(s) 1377, 1411
PspGI CCWGG 2 cut(s) 1377, 1411
PspN4I GGNNCC 2 cut(s) 144, 614
PspPI GGNCC 2 cut(s) 196, 395
PvuII CAGCTG 1 cut(s) 1586
RsaI GTAC 3 cut(s) 722, 962, 968
RsaNI GTAC 3 cut(s) 721, 961, 967
RseI CAYNNNNRTG 1 cut(s) 893
SacI GAGCTC 1 cut(s) 319
SapI GCTCTTC 1 cut(s) 1200
SaqAI TTAA 5 cut(s) 177, 269, 284, 387, 552
Sau3AI GATC 7 cut(s) 38, 703, 1225, 1434, 1447, 1501, 1540
Sau96I GGNCC 2 cut(s) 196, 395
SchI GAGTC 2 cut(s) 817, 854
ScrFI CCNGG 2 cut(s) 1379, 1413
SduI GDGCHC 3 cut(s) 319, 1195, 1337
SfaNI GCATC 2 cut(s) 526, 1486
SfcI CTRYAG 3 cut(s) 275, 1484, 1554
SfuI TTCGAA 1 cut(s) 1119
SmiMI CAYNNNNRTG 1 cut(s) 893
SmlI CTYRAG 1 cut(s) 431
SmoI CTYRAG 1 cut(s) 431
SphI GCATGC 1 cut(s) 932
SsiI CCGC 1 cut(s) 98
SspMI CTAG 4 cut(s) 152, 629, 663, 767
SstI GAGCTC 1 cut(s) 319
StyD4I CCNGG 2 cut(s) 1377, 1411
StyI CCWWGG 4 cut(s) 411, 883, 1214, 1452
TaaI ACNGT 6 cut(s) 127, 279, 710, 829, 922, 1488
TaqI TCGA 7 cut(s) 37, 319, 924, 1119, 1205, 1684, 1690
TatI WGTACW 3 cut(s) 720, 960, 966
TfiI GAWTC 6 cut(s) 163, 257, 264, 401, 686, 1529
Tru1I TTAA 5 cut(s) 177, 269, 284, 387, 552
Tru9I TTAA 5 cut(s) 177, 269, 284, 387, 552
TscAI CASTG 5 cut(s) 832, 1130, 1195, 1345, 1639
TseFI GTSAC 4 cut(s) 458, 916, 1420, 1439
Tsp45I GTSAC 4 cut(s) 458, 916, 1420, 1439
TspDTI ATGAA 6 cut(s) 128, 236, 844, 1042, 1167, 1496
TspGWI ACGGA 1 cut(s) 801
TspRI CASTG 5 cut(s) 832, 1130, 1195, 1345, 1639
Van91I CCANNNNNTGG 1 cut(s) 1102
XagI CCTNNNNNAGG 1 cut(s) 1213
XapI RAATTY 4 cut(s) 547, 650, 1049, 1695
XbaI TCTAGA 1 cut(s) 151
XceI RCATGY 3 cut(s) 383, 932, 942
XcmI CCANNNNNNNNNTGG 1 cut(s) 1324
XmiI GTMKAC 1 cut(s) 943
XmnI GAANNNNTTC 2 cut(s) 1053, 1646
XspI CTAG 4 cut(s) 152, 629, 663, 767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.