Rmu_sc0005329.1_g000026

Calmodulin binding protein-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005329.1
Physical Location & Seq
Reverse (-)
133793 .. 137356
3564 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005329.1_g000026.1.cds

Sequence Viewer

Length: 1710 bp
atgtcgcagaagagacaccaggatgatggcaaggggagttatcgatcagaagggactggtagtccgggggataagcgccggaggactacttttcagaatgtggtttcagaaataatgaagttgcacactgtccagcatttgctggagccaattcttgagcctttgattcgcagagtggtcagagaggaagtagaattggccctaaggaaacatttgaacaatatgaaacagaattgtgagaaagagactcaaccttctgaatcaagaatcttaaagctgcagttcttaaacagtctgtctcttccggtatttactggagctcggattgaaggagaagagagttccagtatccaagtagctttgattgattgctttactggccaaatagttaaatctggccctgaatccgcagctaaagtggaaattgttgtccttgagggtgattttgatggcgaggagggtgacaattggacccctgaagagttcaagaataacattgtaagagagagggagggcaaaaaacctcttctaacaggggaagcagtcatcaatcttaacgatggagttgtttctgtgagtgagatttcttttacagataattcaagctggacaaggagccgtaggttcaggttaggagcaagagttgtagataattttgatggaactagagtgagagaagcaaagacagaatcctttattgtcagggatcaccgtggagaattgtacaagaagcaccaccctccatctctgcttgatgaagtatggcgactagaaaagattggaaaggatggagctttccataagcgtttgactcgggaaaacatccgcaccgtgaaggatttcctcaccctactcttcataaaccctccaaggctccgccatatccttggcacaggtatgtctactaagatgtgggaagtcacagtggagcatgctcagacatgcgtacttgagaagaggatatacttgtactgccctcccagttcacaacagagaactggtgtggtcttcaacgttgtaggacaagtaacatacctacttttggaatgcgaatatattcctctcagtaagctttctgaaacacaaaaggttgatgcccagaacttggtactttctgcatttgaacactggggagaagtagtctcatttgatgatgaggcttctcttttgggtgggggctcatccaatgtcgccaatgttcatcagacatcaagttcaccaagaggggaggagtttactggaagcaagtttatgactactcaaaaaattggcggatttgattattcacaggcatccgcctcttctcctgatatcatttcatccatgtattctgtggggggtacaagtggcttggatgattatgccttgcacaacattgatggaatgggtcttagatatgaccagagtttaagcttcccaggtcaagttgggaattccctgatctgtgacccagattcaatagctgcattttgtgatgatgatcatctacagttttttgatactgatcttcagtcccagagcatgcttccagagtcaccagcagatctacaaagcgctgtagatggcttcttgttggcacaacgttctactgctgctgttgccgccatagataaggctcagaggagatggacaaaactattcagtgtcctcaagtggttctcaattcagaggagcgtgcggaaccgggttcgagacattccaagatactag

Protein Analysis

569

Amino Acids

63.91

Weight (kDa)

6.02

Isoelectric Point (pI)

50.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1105
AccI GTMKAC 1 cut(s) 902
AciI CCGC 7 cut(s) 408, 826, 877, 1272, 1296, 1602, 1678
AclI AACGTT 2 cut(s) 1014, 1582
AclWI GGATC 1 cut(s) 714
AcoI YGGCCR 1 cut(s) 379
AcsI RAATTY 1 cut(s) 1432
AcuI CTGAAG 2 cut(s) 498, 1493
AfaI GTAC 5 cut(s) 725, 948, 971, 1110, 1342
AfeI AGCGCT 1 cut(s) 1555
AfiI CCNNNNNNNGG 2 cut(s) 1042, 1105
AgsI TTSAA 7 cut(s) 217, 329, 487, 603, 1012, 1124, 1458
AhdI GACNNNNNGTC 1 cut(s) 60
AjnI CCWGG 2 cut(s) 18, 1417
AluBI AGCT 9 cut(s) 277, 320, 359, 413, 606, 794, 1072, 1413, 1463
AluI AGCT 9 cut(s) 277, 320, 359, 413, 606, 794, 1072, 1413, 1463
Alw21I GWGCWC 1 cut(s) 322
Alw26I GTCTC 5 cut(s) 7, 239, 303, 1147, 1686
AlwI GGATC 1 cut(s) 714
Ama87I CYCGRG 1 cut(s) 813
Aor51HI AGCGCT 1 cut(s) 1555
AoxI GGCC 3 cut(s) 198, 379, 397
ApeKI GCWGC 4 cut(s) 277, 410, 1463, 1592
ApoI RAATTY 1 cut(s) 1432
Asp700I GAANNNNTTC 2 cut(s) 839, 1056
AspLEI GCGC 2 cut(s) 78, 1556
AspS9I GGNCC 3 cut(s) 199, 398, 471
AsuC2I CCSGG 2 cut(s) 66, 1685
AsuHPI GGTGA 6 cut(s) 452, 473, 701, 838, 1209, 1527
AvaI CYCGRG 1 cut(s) 813
AvaII GGWCC 1 cut(s) 471
AxyI CCTNAGG 1 cut(s) 203
BalI TGGCCA 1 cut(s) 381
BanII GRGCYC 2 cut(s) 322, 1181
BarI GAAGNNNNNNTAC 2 cut(s) 947, 979
BbsI GAAGAC 1 cut(s) 1000
Bbv12I GWGCWC 1 cut(s) 322
BbvI GCAGC 4 cut(s) 264, 422, 1450, 1579
BccI CCATC 9 cut(s) 20, 443, 554, 653, 751, 782, 1373, 1556, 1620
BceAI ACGGC 1 cut(s) 603
BciT130I CCWGG 2 cut(s) 20, 1419
BciVI GTATCC 1 cut(s) 359
BclI TGATCA 1 cut(s) 1480
BcnI CCSGG 2 cut(s) 66, 1685
BcoDI GTCTC 5 cut(s) 7, 239, 303, 1147, 1686
BfaI CTAG 3 cut(s) 666, 770, 1708
BfmI CTRYAG 3 cut(s) 278, 1487, 1557
BfoI RGCGCY 2 cut(s) 79, 1557
BfuI GTATCC 1 cut(s) 359
BglII AGATCT 1 cut(s) 1543
BisI GCNGC 5 cut(s) 278, 411, 1464, 1593, 1602
BlsI GCNGC 5 cut(s) 279, 412, 1465, 1594, 1603
Bme1390I CCNGG 4 cut(s) 20, 66, 1419, 1685
Bme18I GGWCC 1 cut(s) 471
BmeRI GACNNNNNGTC 1 cut(s) 60
BmeT110I CYCGRG 1 cut(s) 813
BmgT120I GGNCC 3 cut(s) 199, 398, 471
BmiI GGNNCC 5 cut(s) 147, 473, 617, 875, 1682
BmrFI CCNGG 4 cut(s) 20, 66, 1419, 1685
BmrI ACTGGG 2 cut(s) 975, 1138
BmsI GCATC 2 cut(s) 1084, 1301
BmuI ACTGGG 2 cut(s) 975, 1138
BpiI GAAGAC 1 cut(s) 1000
BpmI CTGGAG 2 cut(s) 164, 336
BpuEI CTTGAG 4 cut(s) 176, 455, 971, 1634
BpuMI CCSGG 2 cut(s) 66, 1685
Bsa29I ATCGAT 1 cut(s) 43
BsaBI GATNNNNATC 3 cut(s) 1479, 1482, 1503
BsaJI CCNNGG 5 cut(s) 65, 712, 869, 886, 1417
BsaWI WCCGGW 1 cut(s) 304
BsaXI ACNNNNNCTCC 4 cut(s) 627, 657, 1125, 1155
Bsc4I CCNNNNNNNGG 2 cut(s) 1042, 1105
Bse1I ACTGG 8 cut(s) 61, 319, 345, 382, 981, 1003, 1133, 1243
Bse21I CCTNAGG 1 cut(s) 203
Bse8I GATNNNNATC 3 cut(s) 1479, 1482, 1503
BseBI CCWGG 2 cut(s) 20, 1419
BseCI ATCGAT 1 cut(s) 43
BseDI CCNNGG 5 cut(s) 65, 712, 869, 886, 1417
BseGI GGATG 7 cut(s) 28, 793, 822, 1181, 1292, 1319, 1360
BseJI GATNNNNATC 3 cut(s) 1479, 1482, 1503
BseLI CCNNNNNNNGG 2 cut(s) 1042, 1105
BseMII CTCAG 3 cut(s) 950, 1078, 1631
BseNI ACTGG 8 cut(s) 61, 319, 345, 382, 981, 1003, 1133, 1243
BseRI GAGGAG 4 cut(s) 470, 1244, 1636, 1684
BseXI GCAGC 4 cut(s) 264, 422, 1450, 1579
BshFI GGCC 3 cut(s) 200, 381, 399
BshVI ATCGAT 1 cut(s) 43
BsiHKAI GWGCWC 1 cut(s) 322
BsiHKCI CYCGRG 1 cut(s) 813
BsiSI CCGG 4 cut(s) 65, 79, 305, 1684
BslFI GGGAC 2 cut(s) 67, 1498
BslI CCNNNNNNNGG 2 cut(s) 1042, 1105
BsmAI GTCTC 5 cut(s) 7, 239, 303, 1147, 1686
BsmFI GGGAC 2 cut(s) 67, 1498
BsmI GAATGC 1 cut(s) 1052
BsnI GGCC 3 cut(s) 200, 381, 399
BsoBI CYCGRG 1 cut(s) 813
Bsp1286I GDGCHC 2 cut(s) 322, 1181
Bsp1407I TGTACA 1 cut(s) 723
Bsp143I GATC 6 cut(s) 44, 706, 1440, 1480, 1504, 1543
BspACI CCGC 7 cut(s) 408, 826, 877, 1272, 1296, 1602, 1678
BspANI GGCC 3 cut(s) 200, 381, 399
BspCNI CTCAG 3 cut(s) 949, 1077, 1630
BspDI ATCGAT 1 cut(s) 43
BspLI GGNNCC 5 cut(s) 147, 473, 617, 875, 1682
BspMAI CTGCAG 1 cut(s) 282
BspPI GGATC 1 cut(s) 714
BsrGI TGTACA 1 cut(s) 723
BsrI ACTGG 8 cut(s) 61, 319, 345, 382, 981, 1003, 1133, 1243
BssECI CCNNGG 5 cut(s) 65, 712, 869, 886, 1417
BssMI GATC 6 cut(s) 44, 706, 1440, 1480, 1504, 1543
BssT1I CCWWGG 2 cut(s) 869, 886
Bst2UI CCWGG 2 cut(s) 20, 1419
Bst4CI ACNGT 6 cut(s) 130, 293, 713, 832, 925, 1491
Bst6I CTCTTC 8 cut(s) 5, 306, 330, 474, 531, 860, 950, 1306
BstAUI TGTACA 1 cut(s) 723
BstC8I GCNNGC 3 cut(s) 933, 1523, 1676
BstDEI CTNAG 6 cut(s) 203, 906, 936, 1064, 1391, 1617
BstDSI CCRYGG 1 cut(s) 712
BstF5I GGATG 7 cut(s) 28, 793, 822, 1181, 1292, 1319, 1360
BstH2I RGCGCY 2 cut(s) 79, 1557
BstHHI GCGC 2 cut(s) 78, 1556
BstKTI GATC 6 cut(s) 47, 709, 1443, 1483, 1507, 1546
BstMAI GTCTC 5 cut(s) 7, 239, 303, 1147, 1686
BstMBI GATC 6 cut(s) 44, 706, 1440, 1480, 1504, 1543
BstMWI GCNNNNNNNGC 3 cut(s) 378, 1598, 1601
BstNI CCWGG 2 cut(s) 20, 1419
BstNSI RCATGY 3 cut(s) 935, 945, 1525
BstSCI CCNGG 4 cut(s) 18, 64, 1417, 1683
BstSFI CTRYAG 3 cut(s) 278, 1487, 1557
BstV1I GCAGC 4 cut(s) 264, 422, 1450, 1579
BstV2I GAAGAC 1 cut(s) 1000
BstX2I RGATCY 1 cut(s) 1543
BstXI CCANNNNNNTGG 2 cut(s) 26, 887
BstYI RGATCY 1 cut(s) 1543
Bsu15I ATCGAT 1 cut(s) 43
Bsu36I CCTNAGG 1 cut(s) 203
BsuI GTATCC 1 cut(s) 359
BsuRI GGCC 3 cut(s) 200, 381, 399
BsuTUI ATCGAT 1 cut(s) 43
BtgI CCRYGG 1 cut(s) 712
BtsCI GGATG 7 cut(s) 28, 793, 822, 1181, 1292, 1319, 1360
BtsIMutI CAGTG 4 cut(s) 126, 930, 1126, 1648
Cac8I GCNNGC 3 cut(s) 933, 1523, 1676
CfoI GCGC 2 cut(s) 78, 1556
Cfr13I GGNCC 3 cut(s) 199, 398, 471
ClaI ATCGAT 1 cut(s) 43
Csp6I GTAC 5 cut(s) 724, 947, 970, 1109, 1341
CviAII CATG 4 cut(s) 932, 942, 1324, 1522
CviQI GTAC 5 cut(s) 724, 947, 970, 1109, 1341
DdeI CTNAG 6 cut(s) 203, 906, 936, 1064, 1391, 1617
DpnI GATC 6 cut(s) 46, 708, 1442, 1482, 1506, 1545
DpnII GATC 6 cut(s) 44, 706, 1440, 1480, 1504, 1543
DriI GACNNNNNGTC 1 cut(s) 60
EaeI YGGCCR 1 cut(s) 379
Eam1104I CTCTTC 8 cut(s) 5, 306, 330, 474, 531, 860, 950, 1306
Eam1105I GACNNNNNGTC 1 cut(s) 60
EarI CTCTTC 8 cut(s) 5, 306, 330, 474, 531, 860, 950, 1306
EciI GGCGGA 3 cut(s) 866, 1285, 1287
Ecl136II GAGCTC 1 cut(s) 320
Eco130I CCWWGG 2 cut(s) 869, 886
Eco24I GRGCYC 2 cut(s) 322, 1181
Eco32I GATATC 1 cut(s) 1312
Eco47I GGWCC 1 cut(s) 471
Eco47III AGCGCT 1 cut(s) 1555
Eco53kI GAGCTC 1 cut(s) 320
Eco57I CTGAAG 2 cut(s) 498, 1493
Eco81I CCTNAGG 1 cut(s) 203
Eco88I CYCGRG 1 cut(s) 813
EcoICRI GAGCTC 1 cut(s) 320
EcoRI GAATTC 1 cut(s) 1432
EcoRII CCWGG 2 cut(s) 18, 1417
EcoRV GATATC 1 cut(s) 1312
EcoT14I CCWWGG 2 cut(s) 869, 886
EcoT38I GRGCYC 2 cut(s) 322, 1181
ErhI CCWWGG 2 cut(s) 869, 886
FaeI CATG 4 cut(s) 935, 945, 1327, 1525
FaqI GGGAC 2 cut(s) 67, 1498
FatI CATG 4 cut(s) 931, 941, 1323, 1521
FbaI TGATCA 1 cut(s) 1480
FblI GTMKAC 1 cut(s) 902
Fnu4HI GCNGC 5 cut(s) 278, 411, 1464, 1593, 1602
FokI GGATG 7 cut(s) 35, 800, 809, 1168, 1279, 1306, 1367
FriOI GRGCYC 2 cut(s) 322, 1181
Fsp4HI GCNGC 5 cut(s) 278, 411, 1464, 1593, 1602
FspBI CTAG 3 cut(s) 666, 770, 1708
GlaI GCGC 2 cut(s) 77, 1555
GluI GCNGC 5 cut(s) 278, 411, 1464, 1593, 1602
GsuI CTGGAG 2 cut(s) 164, 336
HaeII RGCGCY 2 cut(s) 79, 1557
HaeIII GGCC 3 cut(s) 200, 381, 399
HapII CCGG 4 cut(s) 65, 79, 305, 1684
HhaI GCGC 2 cut(s) 78, 1556
Hin1II CATG 4 cut(s) 935, 945, 1327, 1525
Hin6I GCGC 2 cut(s) 76, 1554
HinP1I GCGC 2 cut(s) 76, 1554
HindIII AAGCTT 2 cut(s) 1070, 1411
HinfI GANTC 9 cut(s) 166, 247, 260, 267, 404, 689, 811, 1454, 1532
HpaII CCGG 4 cut(s) 65, 79, 305, 1684
HphI GGTGA 6 cut(s) 452, 473, 701, 838, 1209, 1527
Hpy166II GTNNAC 4 cut(s) 903, 986, 1217, 1236
Hpy188III TCNNGA 7 cut(s) 155, 264, 487, 815, 1307, 1529, 1691
Hpy8I GTNNAC 4 cut(s) 903, 986, 1217, 1236
HpyAV CCTTC 4 cut(s) 44, 264, 323, 829
HpyCH4III ACNGT 6 cut(s) 130, 293, 713, 832, 925, 1491
HpyCH4IV ACGT 2 cut(s) 1014, 1582
HpyCH4V TGCA 5 cut(s) 124, 280, 1118, 1369, 1466
HpyF10VI GCNNNNNNNGC 3 cut(s) 378, 1598, 1601
HpyF3I CTNAG 6 cut(s) 203, 906, 936, 1064, 1391, 1617
HpySE526I ACGT 2 cut(s) 1014, 1582
Hsp92II CATG 4 cut(s) 935, 945, 1327, 1525
HspAI GCGC 2 cut(s) 76, 1554
Ksp22I TGATCA 1 cut(s) 1480
Kzo9I GATC 6 cut(s) 44, 706, 1440, 1480, 1504, 1543
LmnI GCTCC 8 cut(s) 145, 317, 615, 635, 791, 879, 928, 1671
Lsp1109I GCAGC 4 cut(s) 264, 422, 1450, 1579
LweI GCATC 2 cut(s) 1084, 1301
MaeI CTAG 3 cut(s) 666, 770, 1708
MaeII ACGT 2 cut(s) 1014, 1582
MaeIII GTNAC 5 cut(s) 461, 919, 1027, 1445, 1533
MalI GATC 6 cut(s) 46, 708, 1442, 1482, 1506, 1545
MboI GATC 6 cut(s) 44, 706, 1440, 1480, 1504, 1543
MfeI CAATTG 1 cut(s) 466
MflI RGATCY 1 cut(s) 1543
MhlI GDGCHC 2 cut(s) 322, 1181
MlsI TGGCCA 1 cut(s) 381
MluNI TGGCCA 1 cut(s) 381
MlyI GAGTC 3 cut(s) 241, 805, 1541
Mox20I TGGCCA 1 cut(s) 381
MroXI GAANNNNTTC 2 cut(s) 839, 1056
MscI TGGCCA 1 cut(s) 381
MseI TTAA 5 cut(s) 272, 287, 390, 555, 1409
MslI CAYNNNNRTG 2 cut(s) 21, 896
Msp20I TGGCCA 1 cut(s) 381
MspI CCGG 4 cut(s) 65, 79, 305, 1684
MspR9I CCNGG 4 cut(s) 20, 66, 1419, 1685
MunI CAATTG 1 cut(s) 466
Mva1269I GAATGC 1 cut(s) 1052
MvaI CCWGG 2 cut(s) 20, 1419
MwoI GCNNNNNNNGC 3 cut(s) 378, 1598, 1601
NciI CCSGG 2 cut(s) 66, 1685
NdeII GATC 6 cut(s) 44, 706, 1440, 1480, 1504, 1543
NlaIII CATG 4 cut(s) 935, 945, 1327, 1525
NlaIV GGNNCC 5 cut(s) 147, 473, 617, 875, 1682
NmuCI GTSAC 4 cut(s) 461, 919, 1445, 1533
NspI RCATGY 3 cut(s) 935, 945, 1525
PaeI GCATGC 2 cut(s) 935, 1525
PctI GAATGC 1 cut(s) 1052
PdmI GAANNNNTTC 2 cut(s) 839, 1056
PfeI GAWTC 6 cut(s) 166, 260, 267, 404, 689, 1454
PflMI CCANNNNNTGG 1 cut(s) 1105
PkrI GCNGC 5 cut(s) 279, 412, 1465, 1594, 1603
PleI GAGTC 3 cut(s) 241, 805, 1540
PpsI GAGTC 3 cut(s) 241, 805, 1540
Psp124BI GAGCTC 1 cut(s) 322
Psp1406I AACGTT 2 cut(s) 1014, 1582
Psp6I CCWGG 2 cut(s) 18, 1417
PspGI CCWGG 2 cut(s) 18, 1417
PspN4I GGNNCC 5 cut(s) 147, 473, 617, 875, 1682
PspPI GGNCC 3 cut(s) 199, 398, 471
PstI CTGCAG 1 cut(s) 282
PsuI RGATCY 1 cut(s) 1543
RsaI GTAC 5 cut(s) 725, 948, 971, 1110, 1342
RsaNI GTAC 5 cut(s) 724, 947, 970, 1109, 1341
RseI CAYNNNNRTG 2 cut(s) 21, 896
SacI GAGCTC 1 cut(s) 322
SaqAI TTAA 5 cut(s) 272, 287, 390, 555, 1409
SatI GCNGC 5 cut(s) 278, 411, 1464, 1593, 1602
Sau3AI GATC 6 cut(s) 44, 706, 1440, 1480, 1504, 1543
Sau96I GGNCC 3 cut(s) 199, 398, 471
SchI GAGTC 3 cut(s) 241, 805, 1541
ScrFI CCNGG 4 cut(s) 20, 66, 1419, 1685
SduI GDGCHC 2 cut(s) 322, 1181
SfaNI GCATC 2 cut(s) 1084, 1301
SfcI CTRYAG 3 cut(s) 278, 1487, 1557
SinI GGWCC 1 cut(s) 471
SmiMI CAYNNNNRTG 2 cut(s) 21, 896
SmlI CTYRAG 4 cut(s) 155, 434, 950, 1649
SmoI CTYRAG 4 cut(s) 155, 434, 950, 1649
SphI GCATGC 2 cut(s) 935, 1525
SsiI CCGC 7 cut(s) 408, 826, 877, 1272, 1296, 1602, 1678
SspMI CTAG 3 cut(s) 666, 770, 1708
SstI GAGCTC 1 cut(s) 322
StyD4I CCNGG 4 cut(s) 18, 64, 1417, 1683
StyI CCWWGG 2 cut(s) 869, 886
TaaI ACNGT 6 cut(s) 130, 293, 713, 832, 925, 1491
TaiI ACGT 2 cut(s) 1017, 1585
TaqI TCGA 2 cut(s) 43, 1690
TatI WGTACW 2 cut(s) 723, 969
TauI GCSGC 1 cut(s) 1604
TfiI GAWTC 6 cut(s) 166, 260, 267, 404, 689, 1454
Tru1I TTAA 5 cut(s) 272, 287, 390, 555, 1409
Tru9I TTAA 5 cut(s) 272, 287, 390, 555, 1409
TscAI CASTG 4 cut(s) 133, 930, 1133, 1648
TseFI GTSAC 4 cut(s) 461, 919, 1445, 1533
TseI GCWGC 4 cut(s) 277, 410, 1463, 1592
Tsp45I GTSAC 4 cut(s) 461, 919, 1445, 1533
TspDTI ATGAA 6 cut(s) 131, 239, 771, 847, 1190, 1308
TspRI CASTG 4 cut(s) 133, 930, 1133, 1648
Van91I CCANNNNNTGG 1 cut(s) 1105
VpaK11BI GGWCC 1 cut(s) 471
XapI RAATTY 1 cut(s) 1432
XceI RCATGY 3 cut(s) 935, 945, 1525
XcmI CCANNNNNNNNNTGG 1 cut(s) 1330
XmiI GTMKAC 1 cut(s) 902
XmnI GAANNNNTTC 2 cut(s) 839, 1056
XspI CTAG 3 cut(s) 666, 770, 1708
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.