Prupe.5G181400_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
15182993 .. 15184494
1502 bp
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UTR
Exon/CDS
Intron
Prupe.5G181400.1

Sequence Viewer

Length: 174 bp
ATGGGGATAGTGAGCAAGGCAGGGGATTGGGCATTCAAGGCCTTCACTGCGGGCTTGGGAATCACCACCATATACCTCACCGCCACTTTCTCTGCAAATGTCTACAAAGGCCTCGTTTGGCACAACGCTCAATCGAAAATCGAAAAAGAGCAGTCTGCTGAACAAGCCCCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

58

Amino Acids

6.15

Weight (kDa)

8.09

Isoelectric Point (pI)

39.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0016932)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 102
AciI CCGC 2 cut(s) 50, 81
AgsI TTSAA 1 cut(s) 37
AoxI GGCC 2 cut(s) 39, 109
AsuHPI GGTGA 2 cut(s) 55, 70
BshFI GGCC 2 cut(s) 41, 111
BsmI GAATGC 1 cut(s) 32
BsnI GGCC 2 cut(s) 41, 111
BspACI CCGC 2 cut(s) 50, 81
BspANI GGCC 2 cut(s) 41, 111
BstC8I GCNNGC 1 cut(s) 52
BstMWI GCNNNNNNNGC 3 cut(s) 38, 47, 164
BsuRI GGCC 2 cut(s) 41, 111
BtsI GCAGTG 1 cut(s) 45
BtsIMutI CAGTG 1 cut(s) 45
Cac8I GCNNGC 1 cut(s) 52
CviJI RGCY 4 cut(s) 41, 54, 111, 167
CviKI_1 RGCY 4 cut(s) 41, 54, 111, 167
Eco147I AGGCCT 2 cut(s) 41, 111
FaiI YATR 2 cut(s) 71, 73
FauI CCCGC 1 cut(s) 43
FblI GTMKAC 1 cut(s) 102
HaeIII GGCC 2 cut(s) 41, 111
HinfI GANTC 1 cut(s) 60
HphI GGTGA 2 cut(s) 55, 70
Hpy166II GTNNAC 1 cut(s) 103
Hpy8I GTNNAC 1 cut(s) 103
HpyAV CCTTC 1 cut(s) 52
HpyCH4V TGCA 1 cut(s) 95
HpyF10VI GCNNNNNNNGC 3 cut(s) 38, 47, 164
LpnPI CCDG 1 cut(s) 6
MnlI CCTC 2 cut(s) 86, 122
Mva1269I GAATGC 1 cut(s) 32
MwoI GCNNNNNNNGC 3 cut(s) 38, 47, 164
PceI AGGCCT 2 cut(s) 41, 111
PctI GAATGC 1 cut(s) 32
PfeI GAWTC 1 cut(s) 60
SetI ASST 1 cut(s) 78
SgeI CNNG 6 cut(s) 28, 33, 49, 63, 67, 125
SseBI AGGCCT 2 cut(s) 41, 111
SsiI CCGC 2 cut(s) 50, 81
StuI AGGCCT 2 cut(s) 41, 111
TaqI TCGA 2 cut(s) 134, 141
TfiI GAWTC 1 cut(s) 60
TscAI CASTG 1 cut(s) 52
TspRI CASTG 1 cut(s) 52
XmiI GTMKAC 1 cut(s) 102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.