No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD14G1189000.v1.1 |
| prunus_persica | Prupe.5G181400_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr7g0179931 |
| rosa_laevigata | RLG00000036300 |
| rosa_roxburghii | Rroxscaffold_3G00273300 |
| rosa_samantha | Rh4AG024300 Rh4AG151300 Rh4DG144300 Rh6AG081700 Rh7AG029700 Rh7BG028900 Rh7CG030500 Rh7DG029900 |
| rosa_wichuraiana | Rw7G002360 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 170 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 176 |
| AgsI | TTSAA | 2 cut(s) | 7, 44 |
| AjnI | CCWGG | 1 cut(s) | 35 |
| AluBI | AGCT | 2 cut(s) | 67, 87 |
| AluI | AGCT | 2 cut(s) | 67, 87 |
| Alw26I | GTCTC | 1 cut(s) | 141 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 70 |
| AoxI | GGCC | 1 cut(s) | 166 |
| AspS9I | GGNCC | 1 cut(s) | 167 |
| BceAI | ACGGC | 1 cut(s) | 181 |
| BciT130I | CCWGG | 1 cut(s) | 37 |
| BcoDI | GTCTC | 1 cut(s) | 141 |
| BfmI | CTRYAG | 1 cut(s) | 71 |
| Bme1390I | CCNGG | 1 cut(s) | 37 |
| BmgT120I | GGNCC | 1 cut(s) | 167 |
| BmiI | GGNNCC | 1 cut(s) | 62 |
| BmrFI | CCNGG | 1 cut(s) | 37 |
| BmsI | GCATC | 1 cut(s) | 141 |
| BpmI | CTGGAG | 1 cut(s) | 19 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 17, 47, 71, 101 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 176 |
| Bse3DI | GCAATG | 1 cut(s) | 138 |
| BseBI | CCWGG | 1 cut(s) | 37 |
| BseGI | GGATG | 1 cut(s) | 57 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 176 |
| BseMI | GCAATG | 1 cut(s) | 138 |
| BseMII | CTCAG | 1 cut(s) | 28 |
| BshFI | GGCC | 1 cut(s) | 168 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 176 |
| BsmAI | GTCTC | 1 cut(s) | 141 |
| BsnI | GGCC | 1 cut(s) | 168 |
| BspACI | CCGC | 1 cut(s) | 170 |
| BspANI | GGCC | 1 cut(s) | 168 |
| BspCNI | CTCAG | 1 cut(s) | 27 |
| BspHI | TCATGA | 1 cut(s) | 147 |
| BspLI | GGNNCC | 1 cut(s) | 62 |
| BspMAI | CTGCAG | 1 cut(s) | 75 |
| BsrDI | GCAATG | 1 cut(s) | 138 |
| Bst2UI | CCWGG | 1 cut(s) | 37 |
| BstC8I | GCNNGC | 1 cut(s) | 170 |
| BstDEI | CTNAG | 1 cut(s) | 14 |
| BstF5I | GGATG | 1 cut(s) | 57 |
| BstMAI | GTCTC | 1 cut(s) | 141 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 84 |
| BstNI | CCWGG | 1 cut(s) | 37 |
| BstSCI | CCNGG | 1 cut(s) | 35 |
| BstSFI | CTRYAG | 1 cut(s) | 71 |
| BsuRI | GGCC | 1 cut(s) | 168 |
| BtsCI | GGATG | 1 cut(s) | 57 |
| Cac8I | GCNNGC | 1 cut(s) | 170 |
| CaiI | CAGNNNCTG | 1 cut(s) | 70 |
| CciI | TCATGA | 1 cut(s) | 147 |
| Cfr13I | GGNCC | 1 cut(s) | 167 |
| CviAII | CATG | 1 cut(s) | 148 |
| CviJI | RGCY | 4 cut(s) | 67, 78, 87, 168 |
| CviKI_1 | RGCY | 4 cut(s) | 67, 78, 87, 168 |
| DdeI | CTNAG | 1 cut(s) | 14 |
| EcoRII | CCWGG | 1 cut(s) | 35 |
| FaeI | CATG | 1 cut(s) | 151 |
| FaiI | YATR | 4 cut(s) | 96, 144, 149, 159 |
| FatI | CATG | 1 cut(s) | 147 |
| FauI | CCCGC | 1 cut(s) | 177 |
| FokI | GGATG | 1 cut(s) | 64 |
| GsuI | CTGGAG | 1 cut(s) | 19 |
| HaeIII | GGCC | 1 cut(s) | 168 |
| Hin1II | CATG | 1 cut(s) | 151 |
| HinfI | GANTC | 1 cut(s) | 18 |
| Hpy188I | TCNGA | 1 cut(s) | 17 |
| Hpy188III | TCNNGA | 1 cut(s) | 148 |
| HpyCH4V | TGCA | 2 cut(s) | 73, 154 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 84 |
| HpyF3I | CTNAG | 1 cut(s) | 14 |
| Hsp92II | CATG | 1 cut(s) | 151 |
| LmnI | GCTCC | 2 cut(s) | 72, 92 |
| LpnPI | CCDG | 4 cut(s) | 22, 49, 77, 83 |
| LweI | GCATC | 1 cut(s) | 141 |
| MboII | GAAGA | 3 cut(s) | 115, 134, 137 |
| MnlI | CCTC | 5 cut(s) | 23, 42, 51, 109, 154 |
| MspR9I | CCNGG | 1 cut(s) | 37 |
| MvaI | CCWGG | 1 cut(s) | 37 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 84 |
| NlaIII | CATG | 1 cut(s) | 151 |
| NlaIV | GGNNCC | 1 cut(s) | 62 |
| PagI | TCATGA | 1 cut(s) | 147 |
| PfeI | GAWTC | 1 cut(s) | 18 |
| Psp6I | CCWGG | 1 cut(s) | 35 |
| PspGI | CCWGG | 1 cut(s) | 35 |
| PspN4I | GGNNCC | 1 cut(s) | 62 |
| PspPI | GGNCC | 1 cut(s) | 167 |
| PstI | CTGCAG | 1 cut(s) | 75 |
| PstNI | CAGNNNCTG | 1 cut(s) | 70 |
| Sau96I | GGNCC | 1 cut(s) | 167 |
| ScrFI | CCNGG | 1 cut(s) | 37 |
| SetI | ASST | 5 cut(s) | 15, 41, 62, 69, 89 |
| SfaNI | GCATC | 1 cut(s) | 141 |
| SfcI | CTRYAG | 1 cut(s) | 71 |
| SgeI | CNNG | 8 cut(s) | 48, 49, 56, 76, 82, 112, 127, 160 |
| SsiI | CCGC | 1 cut(s) | 170 |
| StyD4I | CCNGG | 1 cut(s) | 35 |
| TfiI | GAWTC | 1 cut(s) | 18 |
| TspGWI | ACGGA | 1 cut(s) | 79 |