Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD06G1195900.v1.1 |
| prunus_persica | Prupe.5G195700_v2.0.a1 |
| pyrus_communis | pycom06g17310 |
| rosa_chinensis | RchiOBHm_Chr7g0181731 |
| rosa_laevigata | RLG00000005173 |
| rosa_multiflora | Rmu_sc0000988.1_g000008 |
| rosa_roxburghii | Rroxscaffold_3G00271770 |
| rosa_rugosa | Rorug06G0443000 |
| rosa_samantha | Rh7AG045600 Rh7BG044800 Rh7CG046300 |
| rosa_wichuraiana | Rw7G003800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 117 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 972, 1045, 1181 |
| AccBSI | CCGCTC | 1 cut(s) | 438 |
| AciI | CCGC | 3 cut(s) | 11, 298, 438 |
| AcoI | YGGCCR | 1 cut(s) | 694 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 972, 1045, 1064, 1181 |
| AflIII | ACRYGT | 2 cut(s) | 585, 1098 |
| AgsI | TTSAA | 5 cut(s) | 35, 329, 611, 860, 1169 |
| AjnI | CCWGG | 3 cut(s) | 86, 1180, 1191 |
| AluBI | AGCT | 6 cut(s) | 179, 605, 745, 908, 1018, 1051 |
| AluI | AGCT | 6 cut(s) | 179, 605, 745, 908, 1018, 1051 |
| Alw21I | GWGCWC | 1 cut(s) | 1005 |
| Alw26I | GTCTC | 2 cut(s) | 255, 617 |
| Alw44I | GTGCAC | 1 cut(s) | 1001 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1181 |
| AoxI | GGCC | 5 cut(s) | 12, 456, 694, 924, 1114 |
| ApaLI | GTGCAC | 1 cut(s) | 1001 |
| ApeKI | GCWGC | 3 cut(s) | 27, 989, 1074 |
| AspS9I | GGNCC | 1 cut(s) | 1114 |
| AsuHPI | GGTGA | 2 cut(s) | 1019, 1042 |
| BaeGI | GKGCMC | 1 cut(s) | 1005 |
| BalI | TGGCCA | 1 cut(s) | 696 |
| Bbv12I | GWGCWC | 1 cut(s) | 1005 |
| BbvI | GCAGC | 3 cut(s) | 39, 1001, 1086 |
| BccI | CCATC | 6 cut(s) | 38, 631, 752, 799, 1047, 1113 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 572, 606 |
| BciT130I | CCWGG | 3 cut(s) | 88, 1182, 1193 |
| BclI | TGATCA | 1 cut(s) | 535 |
| BcoDI | GTCTC | 2 cut(s) | 255, 617 |
| BfaI | CTAG | 2 cut(s) | 245, 339 |
| BfmI | CTRYAG | 1 cut(s) | 431 |
| BisI | GCNGC | 5 cut(s) | 12, 28, 439, 990, 1075 |
| BlsI | GCNGC | 5 cut(s) | 13, 29, 440, 991, 1076 |
| Bme1390I | CCNGG | 3 cut(s) | 88, 1182, 1193 |
| BmgT120I | GGNCC | 1 cut(s) | 1114 |
| BmiI | GGNNCC | 2 cut(s) | 1037, 1056 |
| BmrFI | CCNGG | 3 cut(s) | 88, 1182, 1193 |
| BmrI | ACTGGG | 1 cut(s) | 503 |
| BmsI | GCATC | 3 cut(s) | 207, 697, 872 |
| BmuI | ACTGGG | 1 cut(s) | 503 |
| BpuEI | CTTGAG | 1 cut(s) | 767 |
| BsaJI | CCNNGG | 2 cut(s) | 15, 462 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 792, 822 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 972, 1045, 1064, 1181 |
| Bse1I | ACTGG | 1 cut(s) | 498 |
| BseBI | CCWGG | 3 cut(s) | 88, 1182, 1193 |
| BseDI | CCNNGG | 2 cut(s) | 15, 462 |
| BseGI | GGATG | 3 cut(s) | 307, 810, 887 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 972, 1045, 1064, 1181 |
| BseNI | ACTGG | 1 cut(s) | 498 |
| BseRI | GAGGAG | 2 cut(s) | 935, 1048 |
| BseSI | GKGCMC | 1 cut(s) | 1005 |
| BseXI | GCAGC | 3 cut(s) | 39, 1001, 1086 |
| BseYI | CCCAGC | 1 cut(s) | 908 |
| BshFI | GGCC | 5 cut(s) | 14, 458, 696, 926, 1116 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1005 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 972, 1045, 1064, 1181 |
| BsmAI | GTCTC | 2 cut(s) | 255, 617 |
| BsmI | GAATGC | 1 cut(s) | 129 |
| BsnI | GGCC | 5 cut(s) | 14, 458, 696, 926, 1116 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1005 |
| Bsp143I | GATC | 2 cut(s) | 535, 1060 |
| BspACI | CCGC | 3 cut(s) | 11, 298, 438 |
| BspANI | GGCC | 5 cut(s) | 14, 458, 696, 926, 1116 |
| BspLI | GGNNCC | 2 cut(s) | 1037, 1056 |
| BsrBI | CCGCTC | 1 cut(s) | 438 |
| BsrI | ACTGG | 1 cut(s) | 498 |
| BssECI | CCNNGG | 2 cut(s) | 15, 462 |
| BssMI | GATC | 2 cut(s) | 535, 1060 |
| Bst2UI | CCWGG | 3 cut(s) | 88, 1182, 1193 |
| Bst4CI | ACNGT | 5 cut(s) | 290, 324, 463, 565, 1007 |
| BstC8I | GCNNGC | 4 cut(s) | 684, 906, 947, 1108 |
| BstDSI | CCRYGG | 1 cut(s) | 462 |
| BstF5I | GGATG | 3 cut(s) | 307, 810, 887 |
| BstKTI | GATC | 2 cut(s) | 538, 1063 |
| BstMAI | GTCTC | 2 cut(s) | 255, 617 |
| BstMBI | GATC | 2 cut(s) | 535, 1060 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 688, 986 |
| BstNI | CCWGG | 3 cut(s) | 88, 1182, 1193 |
| BstNSI | RCATGY | 5 cut(s) | 486, 589, 949, 996, 1102 |
| BstSCI | CCNGG | 3 cut(s) | 86, 1180, 1191 |
| BstSFI | CTRYAG | 1 cut(s) | 431 |
| BstSLI | GKGCMC | 1 cut(s) | 1005 |
| BstV1I | GCAGC | 3 cut(s) | 39, 1001, 1086 |
| BsuRI | GGCC | 5 cut(s) | 14, 458, 696, 926, 1116 |
| BtgI | CCRYGG | 1 cut(s) | 462 |
| BtsCI | GGATG | 3 cut(s) | 307, 810, 887 |
| BtsIMutI | CAGTG | 1 cut(s) | 491 |
| Cac8I | GCNNGC | 4 cut(s) | 684, 906, 947, 1108 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1181 |
| Cfr13I | GGNCC | 1 cut(s) | 1114 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 163, 198, 448, 483 |
| DpnI | GATC | 2 cut(s) | 537, 1062 |
| DpnII | GATC | 2 cut(s) | 535, 1060 |
| EaeI | YGGCCR | 1 cut(s) | 694 |
| Eco147I | AGGCCT | 1 cut(s) | 926 |
| EcoRII | CCWGG | 3 cut(s) | 86, 1180, 1191 |
| EcoT22I | ATGCAT | 2 cut(s) | 222, 887 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 531, 563 |
| FauI | CCCGC | 1 cut(s) | 291 |
| FauNDI | CATATG | 2 cut(s) | 619, 1212 |
| FbaI | TGATCA | 1 cut(s) | 535 |
| Fnu4HI | GCNGC | 5 cut(s) | 12, 28, 439, 990, 1075 |
| FokI | GGATG | 3 cut(s) | 314, 817, 894 |
| Fsp4HI | GCNGC | 5 cut(s) | 12, 28, 439, 990, 1075 |
| FspBI | CTAG | 2 cut(s) | 245, 339 |
| GluI | GCNGC | 5 cut(s) | 12, 28, 439, 990, 1075 |
| GsaI | CCCAGC | 1 cut(s) | 912 |
| HaeIII | GGCC | 5 cut(s) | 14, 458, 696, 926, 1116 |
| HindIII | AAGCTT | 2 cut(s) | 177, 743 |
| HinfI | GANTC | 2 cut(s) | 248, 544 |
| HphI | GGTGA | 2 cut(s) | 1019, 1042 |
| Hpy166II | GTNNAC | 1 cut(s) | 1003 |
| Hpy188I | TCNGA | 1 cut(s) | 234 |
| Hpy188III | TCNNGA | 3 cut(s) | 344, 724, 940 |
| Hpy8I | GTNNAC | 1 cut(s) | 1003 |
| HpyAV | CCTTC | 4 cut(s) | 175, 635, 809, 1147 |
| HpyCH4III | ACNGT | 5 cut(s) | 290, 324, 463, 565, 1007 |
| HpyCH4IV | ACGT | 1 cut(s) | 1011 |
| HpyCH4V | TGCA | 9 cut(s) | 127, 220, 314, 399, 593, 686, 885, 1003, 1106 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 688, 986 |
| HpySE526I | ACGT | 1 cut(s) | 1011 |
| Ksp22I | TGATCA | 1 cut(s) | 535 |
| Kzo9I | GATC | 2 cut(s) | 535, 1060 |
| LmnI | GCTCC | 5 cut(s) | 602, 942, 1035, 1048, 1199 |
| Lsp1109I | GCAGC | 3 cut(s) | 39, 1001, 1086 |
| LweI | GCATC | 3 cut(s) | 207, 697, 872 |
| MaeI | CTAG | 2 cut(s) | 245, 339 |
| MaeII | ACGT | 1 cut(s) | 1011 |
| MaeIII | GTNAC | 4 cut(s) | 469, 559, 763, 1007 |
| MalI | GATC | 2 cut(s) | 537, 1062 |
| MbiI | CCGCTC | 1 cut(s) | 438 |
| MboI | GATC | 2 cut(s) | 535, 1060 |
| MboII | GAAGA | 6 cut(s) | 341, 623, 658, 831, 834, 1079 |
| MfeI | CAATTG | 2 cut(s) | 188, 385 |
| MhlI | GDGCHC | 1 cut(s) | 1005 |
| MlsI | TGGCCA | 1 cut(s) | 696 |
| MluCI | AATT | 7 cut(s) | 151, 188, 385, 571, 672, 716, 931 |
| MluNI | TGGCCA | 1 cut(s) | 696 |
| MlyI | GAGTC | 1 cut(s) | 257 |
| MmeI | TCCRAC | 2 cut(s) | 714, 1177 |
| Mox20I | TGGCCA | 1 cut(s) | 696 |
| Mph1103I | ATGCAT | 2 cut(s) | 222, 887 |
| MscI | TGGCCA | 1 cut(s) | 696 |
| MseI | TTAA | 1 cut(s) | 935 |
| MslI | CAYNNNNRTG | 3 cut(s) | 584, 696, 950 |
| Msp20I | TGGCCA | 1 cut(s) | 696 |
| MspR9I | CCNGG | 3 cut(s) | 88, 1182, 1193 |
| MunI | CAATTG | 2 cut(s) | 188, 385 |
| Mva1269I | GAATGC | 1 cut(s) | 129 |
| MvaI | CCWGG | 3 cut(s) | 88, 1182, 1193 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 688, 986 |
| NdeI | CATATG | 2 cut(s) | 619, 1212 |
| NdeII | GATC | 2 cut(s) | 535, 1060 |
| NlaIV | GGNNCC | 2 cut(s) | 1037, 1056 |
| NmeAIII | GCCGAG | 1 cut(s) | 458 |
| NmuCI | GTSAC | 3 cut(s) | 469, 559, 1007 |
| NsiI | ATGCAT | 2 cut(s) | 222, 887 |
| NspI | RCATGY | 5 cut(s) | 486, 589, 949, 996, 1102 |
| PaeI | GCATGC | 1 cut(s) | 949 |
| PceI | AGGCCT | 1 cut(s) | 926 |
| PciI | ACATGT | 2 cut(s) | 585, 1098 |
| PctI | GAATGC | 1 cut(s) | 129 |
| PfeI | GAWTC | 1 cut(s) | 544 |
| PflFI | GACNNNGTC | 1 cut(s) | 565 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 972, 1045, 1181 |
| PkrI | GCNGC | 5 cut(s) | 13, 29, 440, 991, 1076 |
| PleI | GAGTC | 1 cut(s) | 256 |
| PpsI | GAGTC | 1 cut(s) | 256 |
| PscI | ACATGT | 2 cut(s) | 585, 1098 |
| PsiI | TTATAA | 1 cut(s) | 117 |
| Psp6I | CCWGG | 3 cut(s) | 86, 1180, 1191 |
| PspFI | CCCAGC | 1 cut(s) | 908 |
| PspGI | CCWGG | 3 cut(s) | 86, 1180, 1191 |
| PspN4I | GGNNCC | 2 cut(s) | 1037, 1056 |
| PspPI | GGNCC | 1 cut(s) | 1114 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1181 |
| PsyI | GACNNNGTC | 1 cut(s) | 565 |
| RseI | CAYNNNNRTG | 3 cut(s) | 584, 696, 950 |
| SaqAI | TTAA | 1 cut(s) | 935 |
| SatI | GCNGC | 5 cut(s) | 12, 28, 439, 990, 1075 |
| Sau3AI | GATC | 2 cut(s) | 535, 1060 |
| Sau96I | GGNCC | 1 cut(s) | 1114 |
| SchI | GAGTC | 1 cut(s) | 257 |
| ScrFI | CCNGG | 3 cut(s) | 88, 1182, 1193 |
| SduI | GDGCHC | 1 cut(s) | 1005 |
| SfaNI | GCATC | 3 cut(s) | 207, 697, 872 |
| SfcI | CTRYAG | 1 cut(s) | 431 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 584, 696, 950 |
| SmlI | CTYRAG | 1 cut(s) | 746 |
| SmoI | CTYRAG | 1 cut(s) | 746 |
| SphI | GCATGC | 1 cut(s) | 949 |
| Sse9I | AATT | 7 cut(s) | 151, 188, 385, 571, 672, 716, 931 |
| SseBI | AGGCCT | 1 cut(s) | 926 |
| SsiI | CCGC | 3 cut(s) | 11, 298, 438 |
| SspMI | CTAG | 2 cut(s) | 245, 339 |
| StuI | AGGCCT | 1 cut(s) | 926 |
| StyD4I | CCNGG | 3 cut(s) | 86, 1180, 1191 |
| TaaI | ACNGT | 5 cut(s) | 290, 324, 463, 565, 1007 |
| TaiI | ACGT | 1 cut(s) | 1014 |
| TaqI | TCGA | 2 cut(s) | 582, 725 |
| TasI | AATT | 7 cut(s) | 151, 188, 385, 571, 672, 716, 931 |
| TauI | GCSGC | 2 cut(s) | 14, 441 |
| TfiI | GAWTC | 1 cut(s) | 544 |
| Tru1I | TTAA | 1 cut(s) | 935 |
| Tru9I | TTAA | 1 cut(s) | 935 |
| TscAI | CASTG | 1 cut(s) | 498 |
| TseFI | GTSAC | 3 cut(s) | 469, 559, 1007 |
| TseI | GCWGC | 3 cut(s) | 27, 989, 1074 |
| Tsp45I | GTSAC | 3 cut(s) | 469, 559, 1007 |
| TspDTI | ATGAA | 7 cut(s) | 17, 186, 269, 512, 828, 884, 1166 |
| TspRI | CASTG | 1 cut(s) | 498 |
| Tth111I | GACNNNGTC | 1 cut(s) | 565 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 972, 1045, 1181 |
| VneI | GTGCAC | 1 cut(s) | 1001 |
| XceI | RCATGY | 5 cut(s) | 486, 589, 949, 996, 1102 |
| XspI | CTAG | 2 cut(s) | 245, 339 |
| Zsp2I | ATGCAT | 2 cut(s) | 222, 887 |