Rorug06G0443000

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0017728
Physical Location & Seq
Forward (+)
57476599 .. 57480021
3423 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0443000.1

Sequence Viewer

Length: 1824 bp
ATGGGTTGCGCTTCCAAGTCCTTGTTCACCCAAGGAAGCACTATCCATTTCCCACCTCCACCGCGTCCCTACGCCGCCGCCGCCGCGGCGCCATGCTCCTCTCCTCTAAAATCAACTCCACTCTTCTCTTCCCTCCGTATCACTTCACCGCCACAGTTTCGCTCTCACGTCCTGCCGCCTTTAACACATTTACTCACCGCACCCGCTCTCCTGCCGGTTAGCGGCGGCTCCGACGCCGGAGACAACAACAATGCCGGCGGCGGCGGCGGTGGTTGGAATAATCCATTCGACTCATCATCCTCATGGTGGTGGCATGACGACGACGACAACGACAACGGTGGTGGATCTCATAACCTCATTTTGTTCTCGTCTATATTGTTGGCCTCCGTGACGTGTTGCTTGTGCCAGCTCAGGCTGGCGTATGCCCTAGCGTCGGAGGAGGAGGAGGATGTTGAGTCTGTGTGGGAGGTGAAGGGAGGCAAGTGGACAAAGCTCGTTCCTGATTTTGTGAGGGACGGCTTTGTTGCTGCTAATGGCGGTGGCTTGGCTTCAGTAAGCTTTGGGAGTCTTTGGCTGCAATGCAAGAATCTGTTTGTGCAATTGATGCTTCCAGAAGGCTTTCCTCATAGTGTTACTAGTGATTATCTGGACTACTCTCTCTGGAGAGCAGTTCAGGGCGTCGCTAGCCAAGTCAGTGGTGTGCTTGCCACACAGGCTTTGCTTTATGCTGTTGGATTGGGGAAAGGAGCTATTCCTACTGCCGCGGCGGTGAATTGGGTGCTTAAGGATGGGATTGGATACCTGAGCAAGATTATGCTCTCGAAATATGGGAGGCATTTTGATGTCAATCCGAAAGGGTGGAGGCTGTTTGCTGATCTTATGGAAAATGCTGCTTTTGGAATGGAAATGCTCACTCCTGCATTTCCCAATTATTTTCTCTTGATTGGTGCTGCTGCCGGCGCAGGGCGCTCAGCTGCTGCACTTATCCAGGCTGCTACCAGGAGCTGTTTCTATGCTGGTTTTGCTGCTCAGAGGAACTTTGCTGAGGTTATTGCTAAGGGTGAAGCTCAGGGAATGGTGAGCAAGTTTATCGGTATCATGCTTGGTATAGCATTGGCTAACCAGATAGGATCTTCTACGTCTCTTGGCCTAGCTTCTTTTAGTGTGGTCACTTGCATCCACATGTTCTGCAATCTGAAATCGTATCAAGCCATTCAAATAAGGACTTTAAATCCTTATCGTGCAAGTTTGGTTTTCAGCGAATATCTGCTTAGTGGCCAAGCACCTCCTGTCAAAGAGGTGAACGAGGAGGAACCGCTTTTTCCAGCTGTACCGTTTCTTAACTGGAAGCCAGCAAACAGAGCACCGCCAACAGTATTATCTTCAGAAGCGAAGGATGCAGCTGCTGAAATTGAGCAAAGGCTGCAGTTGGGATCCAAGCTCAGTGATCTAATCAACAACAAGGAGGATGTGCTTGCACTGTTCAGTTTATTTAAAGAAGAAGGCTATATTTTGACTGAACACAGGGGAAGATACTGTGTGGTTCTTAAAGAAACATCTTCACTACAAGACATGCTCAAAGCACTGTTCCATGTCAATTATCTGTATTGGTTGGAGAAGAATGCCGGATATGAAGCAAAAGGAACTTCCATTGACTGCAGACCAGGTGGAAGACTGGAAATGTCTCTAGATTATGTGCGGAGGGAGTTCGACCACGTCAAAACTGATGGGGAATCAGCGGGTTGGGTTACAGATGGTCTTATTGCAAGACCTGCACCTAATAGAATTCGTCCGGGTTATGAGGCCTCATCAGTTGCTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

607

Amino Acids

65.46

Weight (kDa)

6.04

Isoelectric Point (pI)

42.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UVB_sens_prot PF04884 193 - 424 1.4e-77 Vitamin B6 photo-protection and homoeostasis domain
UVB_sens_C PF24160 473 - 585 6.7e-07 Root UVB sensitive protein, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017728)

Species Orthologous Gene IDs
malus_domestica MD06G1195900.v1.1
prunus_persica Prupe.5G195700_v2.0.a1
pyrus_communis pycom06g17310
rosa_chinensis RchiOBHm_Chr7g0181731
rosa_laevigata RLG00000005173
rosa_multiflora Rmu_sc0000988.1_g000008
rosa_roxburghii Rroxscaffold_3G00271770
rosa_rugosa Rorug06G0443000
rosa_samantha Rh7AG045600 Rh7BG044800 Rh7CG046300
rosa_wichuraiana Rw7G003800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1780
AccB1I GGYRCC 1 cut(s) 88
AccBSI CCGCTC 1 cut(s) 206
AccII CGCG 3 cut(s) 64, 86, 764
AclWI GGATC 4 cut(s) 352, 1138, 1428, 1441
AcoI YGGCCR 1 cut(s) 1276
AcsI RAATTY 1 cut(s) 1785
AcuI CTGAAG 2 cut(s) 534, 1368
AcyI GRCGYC 3 cut(s) 89, 234, 678
AfaI GTAC 1 cut(s) 1332
AfiI CCNNNNNNNGG 4 cut(s) 221, 306, 433, 963
AflII CTTAAG 1 cut(s) 782
AflIII ACRYGT 2 cut(s) 392, 1182
AgsI TTSAA 1 cut(s) 1217
AhlI ACTAGT 1 cut(s) 635
AjiI CACGTC 3 cut(s) 169, 393, 1717
AjnI CCWGG 3 cut(s) 987, 998, 1663
AjuI GAANNNNNNNTTGG 2 cut(s) 8, 40
Alw21I GWGCWC 1 cut(s) 1366
Alw26I GTCTC 3 cut(s) 234, 1146, 1689
AlwI GGATC 4 cut(s) 352, 1138, 1428, 1441
AlwNI CAGNNNCTG 3 cut(s) 977, 1005, 1406
AoxI GGCC 4 cut(s) 381, 1147, 1276, 1803
ApoI RAATTY 1 cut(s) 1785
Asp700I GAANNNNTTC 1 cut(s) 618
AspLEI GCGC 4 cut(s) 11, 91, 962, 969
AsuC2I CCSGG 1 cut(s) 1794
AsuHPI GGTGA 8 cut(s) 19, 138, 187, 481, 781, 1073, 1090, 1312
AsuNHI GCTAGC 1 cut(s) 683
BalI TGGCCA 1 cut(s) 1278
BamHI GGATCC 1 cut(s) 1433
BanI GGYRCC 1 cut(s) 88
BbsI GAAGAC 1 cut(s) 1678
Bbv12I GWGCWC 1 cut(s) 1366
BbvCI CCTCAGC 1 cut(s) 1044
BccI CCATC 3 cut(s) 782, 1721, 1748
BceAI ACGGC 1 cut(s) 532
BcgI CGANNNNNNTGC 2 cut(s) 1072, 1106
BciT130I CCWGG 3 cut(s) 989, 1000, 1665
BciVI GTATCC 1 cut(s) 791
BcnI CCSGG 1 cut(s) 1794
BcoDI GTCTC 3 cut(s) 234, 1146, 1689
BcuI ACTAGT 1 cut(s) 635
BfaI CTAG 5 cut(s) 428, 636, 684, 1151, 1688
BfmI CTRYAG 2 cut(s) 1424, 1657
BfoI RGCGCY 2 cut(s) 92, 970
BfrI CTTAAG 1 cut(s) 782
BfuAI ACCTGC 1 cut(s) 1780
BfuI GTATCC 1 cut(s) 791
BglI GCCNNNNNGGC 2 cut(s) 86, 713
BlpI GCTNAGC 1 cut(s) 970
Bme1390I CCNGG 4 cut(s) 989, 1000, 1665, 1794
BmgBI CACGTC 3 cut(s) 169, 393, 1717
BmiI GGNNCC 4 cut(s) 90, 229, 1314, 1435
BmrFI CCNGG 4 cut(s) 989, 1000, 1665, 1794
BmsI GCATC 3 cut(s) 594, 1185, 1387
BmtI GCTAGC 1 cut(s) 687
BpiI GAAGAC 1 cut(s) 1678
BpmI CTGGAG 1 cut(s) 682
Bpu10I CCTNAGC 5 cut(s) 410, 803, 1044, 1056, 1068
Bpu1102I GCTNAGC 1 cut(s) 970
BpuMI CCSGG 1 cut(s) 1794
BsaBI GATNNNNATC 1 cut(s) 846
BsaHI GRCGYC 3 cut(s) 89, 234, 678
BsaJI CCNNGG 3 cut(s) 31, 84, 762
BsaXI ACNNNNNCTCC 2 cut(s) 192, 222
Bsc4I CCNNNNNNNGG 4 cut(s) 221, 306, 433, 963
Bse118I RCCGGY 3 cut(s) 214, 254, 956
Bse1I ACTGG 2 cut(s) 1349, 1680
Bse3DI GCAATG 1 cut(s) 584
Bse8I GATNNNNATC 1 cut(s) 846
BseBI CCWGG 3 cut(s) 989, 1000, 1665
BseDI CCNNGG 3 cut(s) 31, 84, 762
BseGI GGATG 6 cut(s) 296, 454, 793, 1176, 1402, 1474
BseJI GATNNNNATC 1 cut(s) 846
BseLI CCNNNNNNNGG 4 cut(s) 221, 306, 433, 963
BseMI GCAATG 1 cut(s) 584
BseMII CTCAG 7 cut(s) 424, 794, 984, 1035, 1043, 1082, 1456
BseNI ACTGG 2 cut(s) 1349, 1680
BseRI GAGGAG 6 cut(s) 88, 93, 452, 455, 458, 1322
BsgI GTGCAG 2 cut(s) 963, 1758
Bsh1236I CGCG 3 cut(s) 64, 86, 764
BshFI GGCC 4 cut(s) 383, 1149, 1278, 1805
BshNI GGYRCC 1 cut(s) 88
BsiHKAI GWGCWC 1 cut(s) 1366
BsiSI CCGG 6 cut(s) 215, 237, 255, 957, 1626, 1793
BslFI GGGAC 2 cut(s) 51, 527
BslI CCNNNNNNNGG 4 cut(s) 221, 306, 433, 963
BsmAI GTCTC 3 cut(s) 234, 1146, 1689
BsmBI CGTCTC 1 cut(s) 1146
BsmFI GGGAC 2 cut(s) 51, 527
BsmI GAATGC 1 cut(s) 1627
BsnI GGCC 4 cut(s) 383, 1149, 1278, 1805
Bsp1286I GDGCHC 1 cut(s) 1366
Bsp143I GATC 5 cut(s) 344, 874, 1130, 1433, 1447
Bsp1720I GCTNAGC 1 cut(s) 970
BspANI GGCC 4 cut(s) 383, 1149, 1278, 1805
BspCNI CTCAG 7 cut(s) 423, 795, 983, 1036, 1042, 1081, 1455
BspFNI CGCG 3 cut(s) 64, 86, 764
BspLI GGNNCC 4 cut(s) 90, 229, 1314, 1435
BspMAI CTGCAG 2 cut(s) 1428, 1661
BspMI ACCTGC 1 cut(s) 1780
BspOI GCTAGC 1 cut(s) 687
BspPI GGATC 4 cut(s) 352, 1138, 1428, 1441
BspT107I GGYRCC 1 cut(s) 88
BspTI CTTAAG 1 cut(s) 782
BsrBI CCGCTC 1 cut(s) 206
BsrDI GCAATG 1 cut(s) 584
BsrFI RCCGGY 3 cut(s) 214, 254, 956
BsrI ACTGG 2 cut(s) 1349, 1680
BssAI RCCGGY 3 cut(s) 214, 254, 956
BssECI CCNNGG 3 cut(s) 31, 84, 762
BssMI GATC 5 cut(s) 344, 874, 1130, 1433, 1447
BssNI GRCGYC 3 cut(s) 89, 234, 678
BssT1I CCWWGG 1 cut(s) 31
Bst2UI CCWGG 3 cut(s) 989, 1000, 1665
Bst4CI ACNGT 7 cut(s) 156, 338, 1335, 1375, 1482, 1538, 1587
Bst6I CTCTTC 2 cut(s) 128, 133
BstACI GRCGYC 3 cut(s) 89, 234, 678
BstAFI CTTAAG 1 cut(s) 782
BstAPI GCANNNNNTGC 3 cut(s) 604, 1423, 1772
BstC8I GCNNGC 9 cut(s) 256, 407, 417, 685, 705, 958, 1353, 1476, 1819
BstDEI CTNAG 9 cut(s) 410, 803, 970, 1029, 1044, 1056, 1068, 1271, 1442
BstDSI CCRYGG 2 cut(s) 84, 762
BstF5I GGATG 6 cut(s) 296, 454, 793, 1176, 1402, 1474
BstFNI CGCG 3 cut(s) 64, 86, 764
BstH2I RGCGCY 2 cut(s) 92, 970
BstHHI GCGC 4 cut(s) 11, 91, 962, 969
BstKTI GATC 5 cut(s) 347, 877, 1133, 1436, 1450
BstMAI GTCTC 3 cut(s) 234, 1146, 1689
BstMBI GATC 5 cut(s) 344, 874, 1130, 1433, 1447
BstNI CCWGG 3 cut(s) 989, 1000, 1665
BstNSI RCATGY 2 cut(s) 1186, 1576
BstSCI CCNGG 4 cut(s) 987, 998, 1663, 1792
BstSFI CTRYAG 2 cut(s) 1424, 1657
BstUI CGCG 3 cut(s) 64, 86, 764
BstV2I GAAGAC 1 cut(s) 1678
BstX2I RGATCY 3 cut(s) 344, 1130, 1433
BstXI CCANNNNNNTGG 1 cut(s) 695
BstYI RGATCY 3 cut(s) 344, 1130, 1433
BsuI GTATCC 1 cut(s) 791
BsuRI GGCC 4 cut(s) 383, 1149, 1278, 1805
BtgI CCRYGG 2 cut(s) 84, 762
BtrI CACGTC 3 cut(s) 169, 393, 1717
BtsCI GGATG 6 cut(s) 296, 454, 793, 1176, 1402, 1474
BtsIMutI CAGTG 4 cut(s) 700, 1450, 1478, 1583
BveI ACCTGC 1 cut(s) 1780
Cac8I GCNNGC 9 cut(s) 256, 407, 417, 685, 705, 958, 1353, 1476, 1819
CaiI CAGNNNCTG 3 cut(s) 977, 1005, 1406
CfoI GCGC 4 cut(s) 11, 91, 962, 969
Cfr10I RCCGGY 3 cut(s) 214, 254, 956
Cfr42I CCGCGG 2 cut(s) 87, 765
CseI GACGC 4 cut(s) 53, 242, 420, 667
CsiI ACCWGGT 1 cut(s) 1663
Csp6I GTAC 1 cut(s) 1331
CspCI CAANNNNNGTGG 2 cut(s) 322, 357
CviAII CATG 7 cut(s) 93, 303, 314, 1099, 1183, 1573, 1592
CviQI GTAC 1 cut(s) 1331
DdeI CTNAG 9 cut(s) 410, 803, 970, 1029, 1044, 1056, 1068, 1271, 1442
DinI GGCGCC 1 cut(s) 90
DpnI GATC 5 cut(s) 346, 876, 1132, 1435, 1449
DpnII GATC 5 cut(s) 344, 874, 1130, 1433, 1447
DraI TTTAAA 2 cut(s) 1230, 1495
EaeI YGGCCR 1 cut(s) 1276
Eam1104I CTCTTC 2 cut(s) 128, 133
EarI CTCTTC 2 cut(s) 128, 133
Eco130I CCWWGG 1 cut(s) 31
Eco147I AGGCCT 1 cut(s) 1805
Eco57I CTGAAG 2 cut(s) 534, 1368
EcoRI GAATTC 1 cut(s) 1785
EcoRII CCWGG 3 cut(s) 987, 998, 1663
EcoT14I CCWWGG 1 cut(s) 31
EgeI GGCGCC 1 cut(s) 90
EheI GGCGCC 1 cut(s) 90
ErhI CCWWGG 1 cut(s) 31
Esp3I CGTCTC 1 cut(s) 1146
FaeI CATG 7 cut(s) 96, 306, 317, 1102, 1186, 1576, 1595
FaqI GGGAC 2 cut(s) 51, 527
FatI CATG 7 cut(s) 92, 302, 313, 1098, 1182, 1572, 1591
FauI CCCGC 2 cut(s) 211, 1732
FokI GGATG 6 cut(s) 283, 461, 800, 1163, 1409, 1481
FspBI CTAG 5 cut(s) 428, 636, 684, 1151, 1688
GlaI GCGC 4 cut(s) 10, 90, 961, 968
GsuI CTGGAG 1 cut(s) 682
HaeII RGCGCY 2 cut(s) 92, 970
HaeIII GGCC 4 cut(s) 383, 1149, 1278, 1805
HapII CCGG 6 cut(s) 215, 237, 255, 957, 1626, 1793
HgaI GACGC 4 cut(s) 53, 242, 420, 667
HhaI GCGC 4 cut(s) 11, 91, 962, 969
Hin1I GRCGYC 3 cut(s) 89, 234, 678
Hin1II CATG 7 cut(s) 96, 306, 317, 1102, 1186, 1576, 1595
Hin6I GCGC 4 cut(s) 9, 89, 960, 967
HinP1I GCGC 4 cut(s) 9, 89, 960, 967
HindIII AAGCTT 1 cut(s) 556
HinfI GANTC 5 cut(s) 290, 455, 565, 586, 1733
HpaII CCGG 6 cut(s) 215, 237, 255, 957, 1626, 1793
HphI GGTGA 8 cut(s) 19, 138, 187, 481, 781, 1073, 1090, 1312
Hpy166II GTNNAC 3 cut(s) 27, 486, 1303
Hpy188I TCNGA 6 cut(s) 232, 436, 852, 1032, 1197, 1387
Hpy188III TCNNGA 7 cut(s) 500, 611, 647, 661, 820, 940, 1688
Hpy8I GTNNAC 3 cut(s) 27, 486, 1303
Hpy99I CGWCG 5 cut(s) 236, 323, 326, 436, 683
HpyAV CCTTC 4 cut(s) 466, 608, 1387, 1496
HpyCH4III ACNGT 7 cut(s) 156, 338, 1335, 1375, 1482, 1538, 1587
HpyCH4IV ACGT 4 cut(s) 168, 392, 1139, 1716
HpyF3I CTNAG 9 cut(s) 410, 803, 970, 1029, 1044, 1056, 1068, 1271, 1442
HpySE526I ACGT 4 cut(s) 168, 392, 1139, 1716
Hsp92I GRCGYC 3 cut(s) 89, 234, 678
Hsp92II CATG 7 cut(s) 96, 306, 317, 1102, 1186, 1576, 1595
HspAI GCGC 4 cut(s) 9, 89, 960, 967
KasI GGCGCC 1 cut(s) 88
KroI GCCGGC 2 cut(s) 254, 956
KroNI GCCGGC 2 cut(s) 256, 958
KspI CCGCGG 2 cut(s) 87, 765
Kzo9I GATC 5 cut(s) 344, 874, 1130, 1433, 1447
LmnI GCTCC 4 cut(s) 101, 233, 746, 1002
LweI GCATC 3 cut(s) 594, 1185, 1387
MabI ACCWGGT 1 cut(s) 1663
MaeI CTAG 5 cut(s) 428, 636, 684, 1151, 1688
MaeII ACGT 4 cut(s) 168, 392, 1139, 1716
MaeIII GTNAC 4 cut(s) 388, 631, 1168, 1747
MalI GATC 5 cut(s) 346, 876, 1132, 1435, 1449
MbiI CCGCTC 1 cut(s) 206
MboI GATC 5 cut(s) 344, 874, 1130, 1433, 1447
MboII GAAGA 9 cut(s) 115, 120, 1125, 1374, 1511, 1542, 1551, 1630, 1683
MfeI CAATTG 1 cut(s) 599
MflI RGATCY 3 cut(s) 344, 1130, 1433
MhlI GDGCHC 1 cut(s) 1366
MlsI TGGCCA 1 cut(s) 1278
MluCI AATT 6 cut(s) 599, 772, 928, 1410, 1597, 1785
MluNI TGGCCA 1 cut(s) 1278
Mly113I GGCGCC 1 cut(s) 89
MlyI GAGTC 3 cut(s) 284, 464, 574
MmeI TCCRAC 5 cut(s) 254, 255, 414, 712, 1593
Mox20I TGGCCA 1 cut(s) 1278
MroNI GCCGGC 2 cut(s) 254, 956
MroXI GAANNNNTTC 1 cut(s) 618
MscI TGGCCA 1 cut(s) 1278
MseI TTAA 6 cut(s) 182, 783, 1229, 1341, 1494, 1548
MslI CAYNNNNRTG 4 cut(s) 301, 307, 840, 1181
Msp20I TGGCCA 1 cut(s) 1278
MspA1I CMGCKG 6 cut(s) 86, 764, 974, 1328, 1403, 1739
MspCI CTTAAG 1 cut(s) 782
MspI CCGG 6 cut(s) 215, 237, 255, 957, 1626, 1793
MspR9I CCNGG 4 cut(s) 989, 1000, 1665, 1794
MunI CAATTG 1 cut(s) 599
Mva1269I GAATGC 1 cut(s) 1627
MvaI CCWGG 3 cut(s) 989, 1000, 1665
MvnI CGCG 3 cut(s) 64, 86, 764
NaeI GCCGGC 2 cut(s) 256, 958
NarI GGCGCC 1 cut(s) 89
NciI CCSGG 1 cut(s) 1794
NdeII GATC 5 cut(s) 344, 874, 1130, 1433, 1447
NgoMIV GCCGGC 2 cut(s) 254, 956
NheI GCTAGC 1 cut(s) 683
NlaIII CATG 7 cut(s) 96, 306, 317, 1102, 1186, 1576, 1595
NlaIV GGNNCC 4 cut(s) 90, 229, 1314, 1435
NmuCI GTSAC 2 cut(s) 388, 1168
NspI RCATGY 2 cut(s) 1186, 1576
PceI AGGCCT 1 cut(s) 1805
PciI ACATGT 1 cut(s) 1182
PcsI WCGNNNNNNNCGW 1 cut(s) 327
PctI GAATGC 1 cut(s) 1627
PdiI GCCGGC 2 cut(s) 256, 958
PdmI GAANNNNTTC 1 cut(s) 618
PfeI GAWTC 2 cut(s) 586, 1733
PflFI GACNNNGTC 1 cut(s) 1715
PleI GAGTC 3 cut(s) 284, 463, 573
PluTI GGCGCC 1 cut(s) 92
PpsI GAGTC 3 cut(s) 284, 463, 573
PscI ACATGT 1 cut(s) 1182
Psp6I CCWGG 3 cut(s) 987, 998, 1663
PspGI CCWGG 3 cut(s) 987, 998, 1663
PspN4I GGNNCC 4 cut(s) 90, 229, 1314, 1435
PstI CTGCAG 2 cut(s) 1428, 1661
PstNI CAGNNNCTG 3 cut(s) 977, 1005, 1406
PsuI RGATCY 3 cut(s) 344, 1130, 1433
PsyI GACNNNGTC 1 cut(s) 1715
PvuII CAGCTG 3 cut(s) 974, 1328, 1403
RsaI GTAC 1 cut(s) 1332
RsaNI GTAC 1 cut(s) 1331
RseI CAYNNNNRTG 4 cut(s) 301, 307, 840, 1181
SacII CCGCGG 2 cut(s) 87, 765
SaqAI TTAA 6 cut(s) 182, 783, 1229, 1341, 1494, 1548
Sau3AI GATC 5 cut(s) 344, 874, 1130, 1433, 1447
SchI GAGTC 3 cut(s) 284, 464, 574
ScrFI CCNGG 4 cut(s) 989, 1000, 1665, 1794
SduI GDGCHC 1 cut(s) 1366
SexAI ACCWGGT 1 cut(s) 1663
SfaNI GCATC 3 cut(s) 594, 1185, 1387
SfcI CTRYAG 2 cut(s) 1424, 1657
SfoI GGCGCC 1 cut(s) 90
Sfr303I CCGCGG 2 cut(s) 87, 765
SgrBI CCGCGG 2 cut(s) 87, 765
SmiMI CAYNNNNRTG 4 cut(s) 301, 307, 840, 1181
SmlI CTYRAG 1 cut(s) 782
SmoI CTYRAG 1 cut(s) 782
SpeI ACTAGT 1 cut(s) 635
Sse9I AATT 6 cut(s) 599, 772, 928, 1410, 1597, 1785
SseBI AGGCCT 1 cut(s) 1805
SspDI GGCGCC 1 cut(s) 88
SspMI CTAG 5 cut(s) 428, 636, 684, 1151, 1688
StuI AGGCCT 1 cut(s) 1805
StyD4I CCNGG 4 cut(s) 987, 998, 1663, 1792
StyI CCWWGG 1 cut(s) 31
TaaI ACNGT 7 cut(s) 156, 338, 1335, 1375, 1482, 1538, 1587
TaiI ACGT 4 cut(s) 171, 395, 1142, 1719
TaqI TCGA 3 cut(s) 288, 821, 1710
TasI AATT 6 cut(s) 599, 772, 928, 1410, 1597, 1785
TfiI GAWTC 2 cut(s) 586, 1733
Tru1I TTAA 6 cut(s) 182, 783, 1229, 1341, 1494, 1548
Tru9I TTAA 6 cut(s) 182, 783, 1229, 1341, 1494, 1548
TscAI CASTG 4 cut(s) 700, 1450, 1485, 1590
TseFI GTSAC 2 cut(s) 388, 1168
Tsp45I GTSAC 2 cut(s) 388, 1168
TspDTI ATGAA 1 cut(s) 1647
TspGWI ACGGA 2 cut(s) 125, 376
TspRI CASTG 4 cut(s) 700, 1450, 1485, 1590
Tth111I GACNNNGTC 1 cut(s) 1715
Vha464I CTTAAG 1 cut(s) 782
XapI RAATTY 1 cut(s) 1785
XbaI TCTAGA 1 cut(s) 1687
XceI RCATGY 2 cut(s) 1186, 1576
XmnI GAANNNNTTC 1 cut(s) 618
XspI CTAG 5 cut(s) 428, 636, 684, 1151, 1688
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.