Cytochrome p450
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G34540 AT3G56630 |
| fragaria_vesca | FvH4_5g12550 FvH4_5g12570 FvH4_5g12580 |
| malus_domestica | MD06G1212400.v1.1 MD14G1222800.v1.1 MD14G1223200.v1.1 |
| prunus_persica | Prupe.5G218500_v2.0.a1 |
| pyrus_communis | pycom06g18960 pycom14g18450 |
| rosa_chinensis | RchiOBHm_Chr7g0184751 |
| rosa_laevigata | RLG00000004953 |
| rosa_multiflora | Rmu_co8018686.1_g000001 Rmu_sc0030785.1_g000001 Rmu_ssc0000289.1_g000016 |
| rosa_roxburghii | Rroxscaffold_3G00269370 |
| rosa_rugosa | Rorug06G0465000 |
| rosa_samantha | Rh7AG077900 Rh7BG069400 Rh7CG070200 Rh7DG069600 |
| rosa_wichuraiana | Rw7G005750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1164 |
| Acc36I | ACCTGC | 1 cut(s) | 200 |
| Acc65I | GGTACC | 1 cut(s) | 1126 |
| AccB1I | GGYRCC | 1 cut(s) | 1126 |
| AccI | GTMKAC | 3 cut(s) | 111, 579, 1134 |
| AccII | CGCG | 2 cut(s) | 779, 1214 |
| AciI | CCGC | 9 cut(s) | 151, 207, 217, 220, 249, 495, 597, 779, 1091 |
| AclI | AACGTT | 1 cut(s) | 726 |
| AclWI | GGATC | 3 cut(s) | 739, 1015, 1028 |
| AcoI | YGGCCR | 2 cut(s) | 343, 919 |
| AcuI | CTGAAG | 1 cut(s) | 882 |
| AcvI | CACGTG | 2 cut(s) | 1302, 1449 |
| AcyI | GRCGYC | 1 cut(s) | 1161 |
| AfaI | GTAC | 4 cut(s) | 1118, 1128, 1208, 1434 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 122, 1227, 1350 |
| AflIII | ACRYGT | 4 cut(s) | 1212, 1301, 1446, 1448 |
| AgeI | ACCGGT | 2 cut(s) | 312, 1129 |
| AgsI | TTSAA | 4 cut(s) | 332, 412, 706, 724 |
| AjnI | CCWGG | 4 cut(s) | 223, 467, 971, 1349 |
| AluBI | AGCT | 5 cut(s) | 7, 402, 988, 1006, 1066 |
| AluI | AGCT | 5 cut(s) | 7, 402, 988, 1006, 1066 |
| Alw21I | GWGCWC | 4 cut(s) | 9, 273, 1068, 1512 |
| Alw26I | GTCTC | 3 cut(s) | 918, 1065, 1364 |
| AlwI | GGATC | 3 cut(s) | 739, 1015, 1028 |
| Ama87I | CYCGRG | 2 cut(s) | 670, 878 |
| AoxI | GGCC | 5 cut(s) | 343, 919, 974, 1104, 1346 |
| ApaI | GGGCCC | 1 cut(s) | 1350 |
| ApeKI | GCWGC | 2 cut(s) | 656, 1400 |
| AsiGI | ACCGGT | 2 cut(s) | 312, 1129 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 336, 719 |
| Asp718I | GGTACC | 1 cut(s) | 1126 |
| AspS9I | GGNCC | 4 cut(s) | 171, 795, 1346, 1347 |
| AsuC2I | CCSGG | 3 cut(s) | 584, 844, 1345 |
| AsuHPI | GGTGA | 3 cut(s) | 69, 320, 380 |
| AsuNHI | GCTAGC | 1 cut(s) | 1006 |
| AvaI | CYCGRG | 2 cut(s) | 670, 878 |
| AvaII | GGWCC | 2 cut(s) | 171, 795 |
| BaeGI | GKGCMC | 1 cut(s) | 1350 |
| BamHI | GGATCC | 1 cut(s) | 1020 |
| BanI | GGYRCC | 1 cut(s) | 1126 |
| BanII | GRGCYC | 3 cut(s) | 9, 1068, 1350 |
| BauI | CACGAG | 1 cut(s) | 978 |
| BbrPI | CACGTG | 2 cut(s) | 1302, 1449 |
| BbsI | GAAGAC | 2 cut(s) | 205, 870 |
| Bbv12I | GWGCWC | 4 cut(s) | 9, 273, 1068, 1512 |
| BbvI | GCAGC | 2 cut(s) | 668, 1412 |
| BccI | CCATC | 6 cut(s) | 56, 599, 1166, 1225, 1289, 1405 |
| BceAI | ACGGC | 2 cut(s) | 194, 1242 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 895, 929 |
| BciT130I | CCWGG | 4 cut(s) | 225, 469, 973, 1351 |
| BcnI | CCSGG | 3 cut(s) | 584, 844, 1345 |
| BcoDI | GTCTC | 3 cut(s) | 918, 1065, 1364 |
| BfaI | CTAG | 1 cut(s) | 1007 |
| BfuAI | ACCTGC | 1 cut(s) | 200 |
| BglII | AGATCT | 1 cut(s) | 1369 |
| BisI | GCNGC | 5 cut(s) | 220, 495, 657, 1092, 1401 |
| BlsI | GCNGC | 5 cut(s) | 221, 496, 658, 1093, 1402 |
| Bme1390I | CCNGG | 7 cut(s) | 225, 469, 584, 844, 973, 1345, 1351 |
| Bme18I | GGWCC | 2 cut(s) | 171, 795 |
| BmeT110I | CYCGRG | 2 cut(s) | 670, 878 |
| BmgT120I | GGNCC | 4 cut(s) | 171, 795, 1346, 1347 |
| BmiI | GGNNCC | 5 cut(s) | 127, 625, 1022, 1128, 1348 |
| BmrFI | CCNGG | 7 cut(s) | 225, 469, 584, 844, 973, 1345, 1351 |
| BmsI | GCATC | 3 cut(s) | 249, 915, 1468 |
| BmtI | GCTAGC | 1 cut(s) | 1010 |
| BpiI | GAAGAC | 2 cut(s) | 205, 870 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 972, 1004 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1455 |
| BpuEI | CTTGAG | 3 cut(s) | 128, 263, 1268 |
| BpuMI | CCSGG | 3 cut(s) | 584, 844, 1345 |
| BsaAI | YACGTR | 3 cut(s) | 1050, 1302, 1449 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1019 |
| BsaHI | GRCGYC | 1 cut(s) | 1161 |
| BsaJI | CCNNGG | 4 cut(s) | 223, 346, 1221, 1349 |
| BsaWI | WCCGGW | 4 cut(s) | 312, 620, 1123, 1129 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1304, 1334 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 122, 1227, 1350 |
| Bse118I | RCCGGY | 3 cut(s) | 312, 917, 1129 |
| Bse1I | ACTGG | 2 cut(s) | 173, 1499 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1019 |
| BseBI | CCWGG | 4 cut(s) | 225, 469, 973, 1351 |
| BseDI | CCNNGG | 4 cut(s) | 223, 346, 1221, 1349 |
| BseGI | GGATG | 4 cut(s) | 512, 1177, 1236, 1359 |
| BseJI | GATNNNNATC | 1 cut(s) | 1019 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 122, 1227, 1350 |
| BseMII | CTCAG | 5 cut(s) | 447, 1263, 1446, 1492, 1525 |
| BseNI | ACTGG | 2 cut(s) | 173, 1499 |
| BseSI | GKGCMC | 1 cut(s) | 1350 |
| BseX3I | CGGCCG | 1 cut(s) | 919 |
| BseXI | GCAGC | 2 cut(s) | 668, 1412 |
| Bsh1236I | CGCG | 2 cut(s) | 779, 1214 |
| Bsh1285I | CGRYCG | 2 cut(s) | 922, 1134 |
| BshFI | GGCC | 5 cut(s) | 345, 921, 976, 1106, 1348 |
| BshNI | GGYRCC | 1 cut(s) | 1126 |
| BshTI | ACCGGT | 2 cut(s) | 312, 1129 |
| BsiEI | CGRYCG | 2 cut(s) | 922, 1134 |
| BsiHKAI | GWGCWC | 4 cut(s) | 9, 273, 1068, 1512 |
| BsiHKCI | CYCGRG | 2 cut(s) | 670, 878 |
| BsiSI | CCGG | 9 cut(s) | 313, 584, 621, 844, 918, 1124, 1130, 1169, 1344 |
| BslFI | GGGAC | 2 cut(s) | 826, 1189 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 122, 1227, 1350 |
| BsmAI | GTCTC | 3 cut(s) | 918, 1065, 1364 |
| BsmFI | GGGAC | 2 cut(s) | 826, 1189 |
| BsnI | GGCC | 5 cut(s) | 345, 921, 976, 1106, 1348 |
| BsoBI | CYCGRG | 2 cut(s) | 670, 878 |
| Bsp120I | GGGCCC | 1 cut(s) | 1346 |
| Bsp1286I | GDGCHC | 5 cut(s) | 9, 273, 1068, 1350, 1512 |
| Bsp143I | GATC | 5 cut(s) | 731, 823, 1020, 1369, 1425 |
| Bsp19I | CCATGG | 1 cut(s) | 1221 |
| BspACI | CCGC | 9 cut(s) | 151, 207, 217, 220, 249, 495, 597, 779, 1091 |
| BspANI | GGCC | 5 cut(s) | 345, 921, 976, 1106, 1348 |
| BspCNI | CTCAG | 5 cut(s) | 448, 1264, 1447, 1491, 1524 |
| BspFNI | CGCG | 2 cut(s) | 779, 1214 |
| BspHI | TCATGA | 1 cut(s) | 636 |
| BspLI | GGNNCC | 5 cut(s) | 127, 625, 1022, 1128, 1348 |
| BspMI | ACCTGC | 1 cut(s) | 200 |
| BspOI | GCTAGC | 1 cut(s) | 1010 |
| BspPI | GGATC | 3 cut(s) | 739, 1015, 1028 |
| BspT107I | GGYRCC | 1 cut(s) | 1126 |
| BsrFI | RCCGGY | 3 cut(s) | 312, 917, 1129 |
| BsrI | ACTGG | 2 cut(s) | 173, 1499 |
| BssAI | RCCGGY | 3 cut(s) | 312, 917, 1129 |
| BssECI | CCNNGG | 4 cut(s) | 223, 346, 1221, 1349 |
| BssMI | GATC | 5 cut(s) | 731, 823, 1020, 1369, 1425 |
| BssNI | GRCGYC | 1 cut(s) | 1161 |
| BssSI | CACGAG | 1 cut(s) | 978 |
| BssT1I | CCWWGG | 1 cut(s) | 1221 |
| Bst2BI | CACGAG | 1 cut(s) | 978 |
| Bst2UI | CCWGG | 4 cut(s) | 225, 469, 973, 1351 |
| Bst4CI | ACNGT | 5 cut(s) | 109, 368, 766, 785, 1031 |
| BstACI | GRCGYC | 1 cut(s) | 1161 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1084 |
| BstBAI | YACGTR | 3 cut(s) | 1050, 1302, 1449 |
| BstC8I | GCNNGC | 6 cut(s) | 400, 919, 990, 1008, 1089, 1147 |
| BstDEI | CTNAG | 7 cut(s) | 81, 456, 1184, 1272, 1455, 1478, 1511 |
| BstDSI | CCRYGG | 2 cut(s) | 346, 1221 |
| BstEII | GGTNACC | 1 cut(s) | 308 |
| BstF5I | GGATG | 4 cut(s) | 512, 1177, 1236, 1359 |
| BstFNI | CGCG | 2 cut(s) | 779, 1214 |
| BstKTI | GATC | 5 cut(s) | 734, 826, 1023, 1372, 1428 |
| BstMAI | GTCTC | 3 cut(s) | 918, 1065, 1364 |
| BstMBI | GATC | 5 cut(s) | 731, 823, 1020, 1369, 1425 |
| BstMCI | CGRYCG | 2 cut(s) | 922, 1134 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 404, 494, 1084 |
| BstNI | CCWGG | 4 cut(s) | 225, 469, 973, 1351 |
| BstNSI | RCATGY | 3 cut(s) | 277, 1078, 1091 |
| BstPI | GGTNACC | 1 cut(s) | 308 |
| BstSCI | CCNGG | 7 cut(s) | 223, 467, 582, 842, 971, 1343, 1349 |
| BstSLI | GKGCMC | 1 cut(s) | 1350 |
| BstSNI | TACGTA | 1 cut(s) | 1050 |
| BstUI | CGCG | 2 cut(s) | 779, 1214 |
| BstV1I | GCAGC | 2 cut(s) | 668, 1412 |
| BstV2I | GAAGAC | 2 cut(s) | 205, 870 |
| BstX2I | RGATCY | 2 cut(s) | 1020, 1369 |
| BstYI | RGATCY | 2 cut(s) | 1020, 1369 |
| BstZI | CGGCCG | 1 cut(s) | 919 |
| BsuRI | GGCC | 5 cut(s) | 345, 921, 976, 1106, 1348 |
| BtgI | CCRYGG | 2 cut(s) | 346, 1221 |
| BtgZI | GCGATG | 1 cut(s) | 618 |
| BtsCI | GGATG | 4 cut(s) | 512, 1177, 1236, 1359 |
| BtsIMutI | CAGTG | 1 cut(s) | 1506 |
| BveI | ACCTGC | 1 cut(s) | 200 |
| Cac8I | GCNNGC | 6 cut(s) | 400, 919, 990, 1008, 1089, 1147 |
| CciI | TCATGA | 1 cut(s) | 636 |
| Cfr10I | RCCGGY | 3 cut(s) | 312, 917, 1129 |
| Cfr13I | GGNCC | 4 cut(s) | 171, 795, 1346, 1347 |
| CseI | GACGC | 2 cut(s) | 662, 1392 |
| Csp6I | GTAC | 4 cut(s) | 1117, 1127, 1207, 1433 |
| CspAI | ACCGGT | 2 cut(s) | 312, 1129 |
| CviQI | GTAC | 4 cut(s) | 1117, 1127, 1207, 1433 |
| DdeI | CTNAG | 7 cut(s) | 81, 456, 1184, 1272, 1455, 1478, 1511 |
| DpnI | GATC | 5 cut(s) | 733, 825, 1022, 1371, 1427 |
| DpnII | GATC | 5 cut(s) | 731, 823, 1020, 1369, 1425 |
| DraI | TTTAAA | 1 cut(s) | 999 |
| EaeI | YGGCCR | 2 cut(s) | 343, 919 |
| EagI | CGGCCG | 1 cut(s) | 919 |
| EciI | GGCGGA | 2 cut(s) | 206, 612 |
| Ecl136II | GAGCTC | 2 cut(s) | 7, 1066 |
| EclXI | CGGCCG | 1 cut(s) | 919 |
| Eco105I | TACGTA | 1 cut(s) | 1050 |
| Eco130I | CCWWGG | 1 cut(s) | 1221 |
| Eco24I | GRGCYC | 3 cut(s) | 9, 1068, 1350 |
| Eco32I | GATATC | 1 cut(s) | 895 |
| Eco47I | GGWCC | 2 cut(s) | 171, 795 |
| Eco52I | CGGCCG | 1 cut(s) | 919 |
| Eco53kI | GAGCTC | 2 cut(s) | 7, 1066 |
| Eco57I | CTGAAG | 1 cut(s) | 882 |
| Eco72I | CACGTG | 2 cut(s) | 1302, 1449 |
| Eco88I | CYCGRG | 2 cut(s) | 670, 878 |
| Eco91I | GGTNACC | 1 cut(s) | 308 |
| EcoICRI | GAGCTC | 2 cut(s) | 7, 1066 |
| EcoO65I | GGTNACC | 1 cut(s) | 308 |
| EcoRII | CCWGG | 4 cut(s) | 223, 467, 971, 1349 |
| EcoRV | GATATC | 1 cut(s) | 895 |
| EcoT14I | CCWWGG | 1 cut(s) | 1221 |
| EcoT22I | ATGCAT | 1 cut(s) | 1525 |
| EcoT38I | GRGCYC | 3 cut(s) | 9, 1068, 1350 |
| ErhI | CCWWGG | 1 cut(s) | 1221 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 272, 304, 704, 736 |
| FaqI | GGGAC | 2 cut(s) | 826, 1189 |
| FblI | GTMKAC | 3 cut(s) | 111, 579, 1134 |
| Fnu4HI | GCNGC | 5 cut(s) | 220, 495, 657, 1092, 1401 |
| FokI | GGATG | 4 cut(s) | 519, 1184, 1243, 1366 |
| FriOI | GRGCYC | 3 cut(s) | 9, 1068, 1350 |
| Fsp4HI | GCNGC | 5 cut(s) | 220, 495, 657, 1092, 1401 |
| FspBI | CTAG | 1 cut(s) | 1007 |
| GluI | GCNGC | 5 cut(s) | 220, 495, 657, 1092, 1401 |
| HaeIII | GGCC | 5 cut(s) | 345, 921, 976, 1106, 1348 |
| HapII | CCGG | 9 cut(s) | 313, 584, 621, 844, 918, 1124, 1130, 1169, 1344 |
| HgaI | GACGC | 2 cut(s) | 662, 1392 |
| Hin1I | GRCGYC | 1 cut(s) | 1161 |
| HincII | GTYRAC | 2 cut(s) | 580, 1135 |
| HindII | GTYRAC | 2 cut(s) | 580, 1135 |
| HinfI | GANTC | 7 cut(s) | 351, 460, 752, 981, 1015, 1180, 1474 |
| HpaII | CCGG | 9 cut(s) | 313, 584, 621, 844, 918, 1124, 1130, 1169, 1344 |
| HphI | GGTGA | 3 cut(s) | 69, 320, 380 |
| Hpy166II | GTNNAC | 4 cut(s) | 112, 371, 580, 1135 |
| Hpy8I | GTNNAC | 4 cut(s) | 112, 371, 580, 1135 |
| Hpy99I | CGWCG | 8 cut(s) | 368, 581, 656, 1064, 1160, 1163, 1295, 1433 |
| HpyAV | CCTTC | 5 cut(s) | 148, 418, 634, 1183, 1221 |
| HpyCH4III | ACNGT | 5 cut(s) | 109, 368, 766, 785, 1031 |
| HpyCH4V | TGCA | 4 cut(s) | 1078, 1087, 1400, 1523 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 404, 494, 1084 |
| HpyF3I | CTNAG | 7 cut(s) | 81, 456, 1184, 1272, 1455, 1478, 1511 |
| Hsp92I | GRCGYC | 1 cut(s) | 1161 |
| KpnI | GGTACC | 1 cut(s) | 1130 |
| KroI | GCCGGC | 1 cut(s) | 917 |
| KroNI | GCCGGC | 1 cut(s) | 919 |
| Kzo9I | GATC | 5 cut(s) | 731, 823, 1020, 1369, 1425 |
| LmnI | GCTCC | 4 cut(s) | 4, 268, 1003, 1071 |
| Lsp1109I | GCAGC | 2 cut(s) | 668, 1412 |
| LweI | GCATC | 3 cut(s) | 249, 915, 1468 |
| MaeI | CTAG | 1 cut(s) | 1007 |
| MaeIII | GTNAC | 2 cut(s) | 308, 1201 |
| MalI | GATC | 5 cut(s) | 733, 825, 1022, 1371, 1427 |
| MboI | GATC | 5 cut(s) | 731, 823, 1020, 1369, 1425 |
| MflI | RGATCY | 2 cut(s) | 1020, 1369 |
| MhlI | GDGCHC | 5 cut(s) | 9, 273, 1068, 1350, 1512 |
| MluCI | AATT | 4 cut(s) | 474, 563, 815, 1054 |
| MluI | ACGCGT | 1 cut(s) | 1212 |
| MlyI | GAGTC | 2 cut(s) | 990, 1468 |
| MmeI | TCCRAC | 2 cut(s) | 103, 709 |
| Mph1103I | ATGCAT | 1 cut(s) | 1525 |
| MroNI | GCCGGC | 1 cut(s) | 917 |
| MroXI | GAANNNNTTC | 2 cut(s) | 336, 719 |
| MseI | TTAA | 5 cut(s) | 357, 573, 711, 746, 998 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1215 |
| MspI | CCGG | 9 cut(s) | 313, 584, 621, 844, 918, 1124, 1130, 1169, 1344 |
| MspR9I | CCNGG | 7 cut(s) | 225, 469, 584, 844, 973, 1345, 1351 |
| MvaI | CCWGG | 4 cut(s) | 225, 469, 973, 1351 |
| MvnI | CGCG | 2 cut(s) | 779, 1214 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 404, 494, 1084 |
| NaeI | GCCGGC | 1 cut(s) | 919 |
| NciI | CCSGG | 3 cut(s) | 584, 844, 1345 |
| NcoI | CCATGG | 1 cut(s) | 1221 |
| NdeII | GATC | 5 cut(s) | 731, 823, 1020, 1369, 1425 |
| NgoMIV | GCCGGC | 1 cut(s) | 917 |
| NheI | GCTAGC | 1 cut(s) | 1006 |
| NlaIV | GGNNCC | 5 cut(s) | 127, 625, 1022, 1128, 1348 |
| NmeAIII | GCCGAG | 2 cut(s) | 321, 947 |
| NmuCI | GTSAC | 2 cut(s) | 308, 1201 |
| NsiI | ATGCAT | 1 cut(s) | 1525 |
| NspI | RCATGY | 3 cut(s) | 277, 1078, 1091 |
| PaeI | GCATGC | 1 cut(s) | 1091 |
| PagI | TCATGA | 1 cut(s) | 636 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1211, 1400 |
| PdiI | GCCGGC | 1 cut(s) | 919 |
| PdmI | GAANNNNTTC | 2 cut(s) | 336, 719 |
| PfeI | GAWTC | 5 cut(s) | 351, 460, 752, 1015, 1180 |
| PflFI | GACNNNGTC | 1 cut(s) | 1160 |
| PinAI | ACCGGT | 2 cut(s) | 312, 1129 |
| PkrI | GCNGC | 5 cut(s) | 221, 496, 658, 1093, 1402 |
| PleI | GAGTC | 2 cut(s) | 989, 1468 |
| PmaCI | CACGTG | 2 cut(s) | 1302, 1449 |
| PmlI | CACGTG | 2 cut(s) | 1302, 1449 |
| PpsI | GAGTC | 2 cut(s) | 989, 1468 |
| Ppu21I | YACGTR | 3 cut(s) | 1050, 1302, 1449 |
| Psp124BI | GAGCTC | 2 cut(s) | 9, 1068 |
| Psp1406I | AACGTT | 1 cut(s) | 726 |
| Psp6I | CCWGG | 4 cut(s) | 223, 467, 971, 1349 |
| PspCI | CACGTG | 2 cut(s) | 1302, 1449 |
| PspEI | GGTNACC | 1 cut(s) | 308 |
| PspGI | CCWGG | 4 cut(s) | 223, 467, 971, 1349 |
| PspN4I | GGNNCC | 5 cut(s) | 127, 625, 1022, 1128, 1348 |
| PspOMI | GGGCCC | 1 cut(s) | 1346 |
| PspPI | GGNCC | 4 cut(s) | 171, 795, 1346, 1347 |
| PsuI | RGATCY | 2 cut(s) | 1020, 1369 |
| PsyI | GACNNNGTC | 1 cut(s) | 1160 |
| RsaI | GTAC | 4 cut(s) | 1118, 1128, 1208, 1434 |
| RsaNI | GTAC | 4 cut(s) | 1117, 1127, 1207, 1433 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1215 |
| SacI | GAGCTC | 2 cut(s) | 9, 1068 |
| SalI | GTCGAC | 2 cut(s) | 578, 1133 |
| SaqAI | TTAA | 5 cut(s) | 357, 573, 711, 746, 998 |
| SatI | GCNGC | 5 cut(s) | 220, 495, 657, 1092, 1401 |
| Sau3AI | GATC | 5 cut(s) | 731, 823, 1020, 1369, 1425 |
| Sau96I | GGNCC | 4 cut(s) | 171, 795, 1346, 1347 |
| SchI | GAGTC | 2 cut(s) | 990, 1468 |
| ScrFI | CCNGG | 7 cut(s) | 225, 469, 584, 844, 973, 1345, 1351 |
| SduI | GDGCHC | 5 cut(s) | 9, 273, 1068, 1350, 1512 |
| SfaNI | GCATC | 3 cut(s) | 249, 915, 1468 |
| SinI | GGWCC | 2 cut(s) | 171, 795 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1215 |
| SmlI | CTYRAG | 3 cut(s) | 143, 278, 1283 |
| SmoI | CTYRAG | 3 cut(s) | 143, 278, 1283 |
| SnaBI | TACGTA | 1 cut(s) | 1050 |
| SphI | GCATGC | 1 cut(s) | 1091 |
| Sse9I | AATT | 4 cut(s) | 474, 563, 815, 1054 |
| SsiI | CCGC | 9 cut(s) | 151, 207, 217, 220, 249, 495, 597, 779, 1091 |
| SspI | AATATT | 1 cut(s) | 23 |
| SspMI | CTAG | 1 cut(s) | 1007 |
| SstI | GAGCTC | 2 cut(s) | 9, 1068 |
| StyD4I | CCNGG | 7 cut(s) | 223, 467, 582, 842, 971, 1343, 1349 |
| StyI | CCWWGG | 1 cut(s) | 1221 |
| TaaI | ACNGT | 5 cut(s) | 109, 368, 766, 785, 1031 |
| TaqI | TCGA | 8 cut(s) | 165, 291, 579, 810, 1059, 1134, 1394, 1428 |
| TasI | AATT | 4 cut(s) | 474, 563, 815, 1054 |
| TauI | GCSGC | 3 cut(s) | 222, 497, 1094 |
| TfiI | GAWTC | 5 cut(s) | 351, 460, 752, 1015, 1180 |
| Tru1I | TTAA | 5 cut(s) | 357, 573, 711, 746, 998 |
| Tru9I | TTAA | 5 cut(s) | 357, 573, 711, 746, 998 |
| TscAI | CASTG | 1 cut(s) | 1506 |
| TseFI | GTSAC | 2 cut(s) | 308, 1201 |
| TseI | GCWGC | 2 cut(s) | 656, 1400 |
| Tsp45I | GTSAC | 2 cut(s) | 308, 1201 |
| TspDTI | ATGAA | 7 cut(s) | 61, 307, 625, 653, 758, 1328, 1403 |
| TspGWI | ACGGA | 3 cut(s) | 363, 468, 1396 |
| TspRI | CASTG | 1 cut(s) | 1506 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1160 |
| VpaK11BI | GGWCC | 2 cut(s) | 171, 795 |
| XceI | RCATGY | 3 cut(s) | 277, 1078, 1091 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1228 |
| XmiI | GTMKAC | 3 cut(s) | 111, 579, 1134 |
| XmnI | GAANNNNTTC | 2 cut(s) | 336, 719 |
| XspI | CTAG | 1 cut(s) | 1007 |
| ZraI | GACGTC | 1 cut(s) | 1162 |
| Zsp2I | ATGCAT | 1 cut(s) | 1525 |