Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0012623

Physical Location & Seq

Genomic Coordinates Forward (+)

17824728 .. 17827605

Gene Structure 2878 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G235100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2418 bp

ATGGCAAAGTTTGGCAAGACAAACACTAAAAGGAGCCTTGAGAGTCTACTGGACATGGACAAATCAGTTGCTACAAAAATTTCTGTGCCACTTAGACCCTCGAAGATGATTCCGGGCCATGGCCTTGAATTCAATAACCTTTCATACAGTGTAACAAAGAAGCTGAAAAAAGATGGGGTTTGGATCAAGAAAGAAGCTTATCTTCTTAATGACATCTCTGGCCAGGCAGTGAGAGGTGAGATCATGGCCATCATGGGACCTAGTGGTGCTGGGAAATCTACATTTCTCGATGCCTTGGCGGGACGGATTGCTCAAGGCAGTTTGGAAGGCTCTGTTAGAATTGATGGAAGAACGGTTACTACAAGCTACATGAAGATGGTGTCCTCTTATGTGATGCAAGATGACCAGCTCTTCCCTATGTTGACTGTGTTTGAGACCTTCATGTTTGCAGCTGAGATTAGGCTTCCTCCCTCCATTTCCAGGGATGAAAAGAGAAGTAGAGTCTATGAGCTCCTTGAACAGCTGGGCTTGCAGAGAGAGTGTCGGGAGAGAAAGACGAAGGTTGTCAATTGCATTGACATCATCCACAAACCTTCACTGCTGTTTCTTGATGAACCGACTTCTGGTCTTGACTCCACAAGCGCTTACAGTGTCGTGGAAAAGGTCAAGGAGATAGCTCGAGGTGGTAGCATCGTGCTCATGACCATCCACCAACCTTCATATCGTATTCAAATGCTCTTAGACCGCATGACAATCCTAGCAAGAGGGAGACTGATATATTTGGGAAGCCCACATGGTTTGTCTTCCCATCTTTCTGGATTTGGAAGGCCAGTTCCGGATGGTGAGAATGGCCTTGAGTATCTCCTGGATGTGATTAAAGAATATGATGAATCAACTGTGGGACTAGACCCATTGGTCATGTACCAACGCGACGGCATCAAACCTGATCTGGTGGCCAGAACCCCGGTTGCAAAAACACCAAAGACACCAACTCCTCATAGAAAGACCCCTGCATCCAAGCACGCAATTAAACTTCGTAGTCAAGCCTTTTCCTTGGGAAATAGGAGACCATCTGGAGCAGGTGAATCCGGTCAGTTTGATAACGAGGATGAGGATGAGAATTTTGACAACTCCCTGGAAAGGAAATCAGTTCATCAAACACCAATGCACCTGCAGAGCAGTGGTGTCTATAACCCTCGTCTAGCTTCACACTTCTACAAGGACTTCTCTGTCTGGATTTACCATGGTGTCAAAGGAACCCCTCGTCGCCCGCCATCATGGACTCCTGCTAGAACTCCAGGAAGGACCCCTGGAAAGACACCCCTCTCAGGTATTAGAAGCCAAGTTTCAAGCCAATATCCCACACCTCAGTTCAACCCGCCACCACCACGACACGGTAGTACTAAAACCCCTGTGGTCTTCAGCTCTTCCACTGAAGACTCATATGCACCTTATTATGAAGAGTTTGAAATAGAAGAAGAAGAGCTTGATGAGCCAGACCATGGGCCTAAGTTTGCAAACCCATGGCTGCGTGAGGTTGCAGTCCTCTCATGGCGCACAGCGCTCAATGTGATTCGCACTCCTGAACTCTTCCTCTCTCGTGAGATTGTGTTGGCAGTTATGGCACTCATTCTGTCTTCCCTCTTCAAGAACCTGAGCCATGATTCGTTCAAAGACATAAACAGGCTTCTCAACTTTTACATCTTTGCAGTTTGCCTGGTTTTCTTTTCATCCAATGATGCTGTCCCAACTTTCATCCAAGAAAGGTTCATTTTCATCAGGGAATCTTCTCACAATGCTTATCGTGCCTCTTCGTACGTCATCTCTTCCCTCATTGTTTATCTCCCATTCTTTGCCATACAAGGCTTCACATTTGCTGCCATTACCAAATACATGCTTCACCTCAACAGCAACCTTTTCAAATTCTGGATCATCCTTTATGCCTCACTCATCACCACCAATGCTTATGTGATGCTTGTGAGCGCTCTGGTACCAAGTTACATCACAGGGTATGCTGTTGTGATAGCTACCACAGCTCTTTTCTTTCTGACTTGTGGCTTTTTCTTAAAGCGTCAGCAGATACCGGTTTACTGGAGGTGGGTGCATTACATATCTGCAATTAAGTACCCTTTTGAGGCAATGCTAACAAATGAATTCAAAGGAATACGCTGCTACCACGGCGTGCCATCGGATCTTACCCCTGGACCTCTAGGAGAATTGAAGATCAGCTCCCTGCACAGTACCTCCCAAAAAGTGGAAAAGAATTGCGTGATTATTGGACAAGATGTTATATCATCCATGGATATCACTATAGACAACATTTGGTATGATATTGCAATCTTGCTAGCTTGGGGTGTTCTTTACCGGTTCTTATTCTATGTGGTCCTCAGATTCTATTCCAAGAATGAGAGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005775 GO:0005886 GO:0006810 GO:0007034 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009987 GO:0010208 GO:0010927 GO:0015399 GO:0015405 GO:0015893 GO:0016020 GO:0016021 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0022804 GO:0022857 GO:0030198 GO:0031224 GO:0031974 GO:0032501 GO:0032502 GO:0032989 GO:0042221 GO:0042493 GO:0042623 GO:0042626 GO:0042891 GO:0043062 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043492 GO:0044085 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045229 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0070013 GO:0071840 GO:0071944 GO:0085029

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

806

Amino Acids

90.94

Weight (kDa)

9.13

Isoelectric Point (pI)

41.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012623)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g17530
malus_domestica	MD06G1228700.v1.1 MD14G1237900.v1.1
prunus_persica	Prupe.5G235100_v2.0.a1
pyrus_communis	pycom06g20500 pycom14g19900
rosa_chinensis	RchiOBHm_Chr3g0493261 RchiOBHm_Chr7g0178121
rosa_laevigata	RLG00000005469
rosa_multiflora	Rmu_sc0000425.1_g000011 Rmu_sc0005324.1_g000001
rosa_roxburghii	Rroxscaffold_6G00391680
rosa_rugosa	Rorug03G0260000 Rorug06G0413700
rosa_samantha	Rh3DG344200 Rh7CG012900 Rh7DG013200
rosa_wichuraiana	Rw3G027160 Rw7G001030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1070, 1179
AasI	GACNNNNNNGTC	2 cut(s)	914, 1229
Acc36I	ACCTGC	2 cut(s)	1070, 1179
Acc65I	GGTACC	1 cut(s)	1990
AccB1I	GGYRCC	1 cut(s)	1990
AccB7I	CCANNNNNTGG	2 cut(s)	1502, 2254
AccI	GTMKAC	1 cut(s)	46
AccII	CGCG	1 cut(s)	930
AccIII	TCCGGA	1 cut(s)	835
AciI	CCGC	4 cut(s)	299, 745, 1271, 1379
AclWI	GGATC	3 cut(s)	191, 1937, 2199
AcoI	YGGCCR	3 cut(s)	220, 246, 954
AcsI	RAATTY	5 cut(s)	78, 128, 1120, 1922, 2153
AcuI	CTGAAG	2 cut(s)	1405, 1455
AdeI	CACNNNGTG	1 cut(s)	2182
AfaI	GTAC	6 cut(s)	923, 1402, 1817, 1992, 2126, 2242
AfeI	AGCGCT	3 cut(s)	643, 1563, 1984
AfiI	CCNNNNNNNGG	9 cut(s)	119, 480, 623, 1140, 1328, 1394, 1502, 2134, 2254
AgeI	ACCGGT	2 cut(s)	2083, 2364
AhdI	GACNNNNNGTC	1 cut(s)	624
AjnI	CCWGG	8 cut(s)	222, 479, 864, 1134, 1297, 1309, 1716, 2200
AloI	GAACNNNNNNTCC	2 cut(s)	816, 848
Alw21I	GWGCWC	2 cut(s)	513, 699
Alw26I	GTCTC	3 cut(s)	428, 763, 1060
AlwI	GGATC	3 cut(s)	191, 1937, 2199
Ama87I	CYCGRG	1 cut(s)	678
Aor13HI	TCCGGA	1 cut(s)	835
Aor51HI	AGCGCT	3 cut(s)	643, 1563, 1984
AoxI	GGCC	8 cut(s)	115, 121, 220, 246, 827, 850, 954, 1505
ApeKI	GCWGC	4 cut(s)	449, 1528, 1877, 2169
ApoI	RAATTY	5 cut(s)	78, 128, 1120, 1922, 2153
AsiGI	ACCGGT	2 cut(s)	2083, 2364
Asp718I	GGTACC	1 cut(s)	1990
AspLEI	GCGC	4 cut(s)	644, 1557, 1564, 1985
AspS9I	GGNCC	6 cut(s)	115, 257, 1305, 1505, 2204, 2383
AsuC2I	CCSGG	2 cut(s)	114, 965
AsuHPI	GGTGA	5 cut(s)	248, 854, 1094, 1892, 1945
AsuNHI	GCTAGC	1 cut(s)	2344
AvaI	CYCGRG	1 cut(s)	678
AvaII	GGWCC	4 cut(s)	257, 1305, 2204, 2383
BalI	TGGCCA	3 cut(s)	222, 248, 956
BanI	GGYRCC	1 cut(s)	1990
BanII	GRGCYC	1 cut(s)	513
BarI	GAAGNNNNNNTAC	2 cut(s)	340, 372
BauI	CACGAG	1 cut(s)	1599
BbsI	GAAGAC	4 cut(s)	795, 1411, 1443, 1629
Bbv12I	GWGCWC	2 cut(s)	513, 699
BbvI	GCAGC	4 cut(s)	461, 1515, 1864, 2156
BceAI	ACGGC	2 cut(s)	949, 2194
BciT130I	CCWGG	8 cut(s)	224, 481, 866, 1136, 1299, 1311, 1718, 2202
BcnI	CCSGG	2 cut(s)	114, 965
BcoDI	GTCTC	3 cut(s)	428, 763, 1060
BfaI	CTAG	7 cut(s)	261, 758, 905, 1202, 1290, 2210, 2345
BfmI	CTRYAG	2 cut(s)	1172, 2310
BfoI	RGCGCY	3 cut(s)	645, 1565, 1986
BfuAI	ACCTGC	2 cut(s)	1070, 1179
BisI	GCNGC	4 cut(s)	450, 1529, 1878, 2170
BlsI	GCNGC	4 cut(s)	451, 1530, 1879, 2171
BmcAI	AGTACT	1 cut(s)	1402
Bme18I	GGWCC	4 cut(s)	257, 1305, 2204, 2383
BmeRI	GACNNNNNGTC	1 cut(s)	624
BmeT110I	CYCGRG	1 cut(s)	678
BmgT120I	GGNCC	6 cut(s)	115, 257, 1305, 1505, 2204, 2383
BmiI	GGNNCC	5 cut(s)	35, 258, 1258, 1307, 1992
BmsI	GCATC	7 cut(s)	280, 384, 699, 945, 1022, 1729, 1962
BmtI	GCTAGC	1 cut(s)	2348
BpiI	GAAGAC	4 cut(s)	795, 1411, 1443, 1629
BpmI	CTGGAG	3 cut(s)	1095, 1281, 2113
Bpu10I	CCTNAGC	1 cut(s)	1655
BpuEI	CTTGAG	3 cut(s)	59, 297, 875
BpuMI	CCSGG	2 cut(s)	114, 965
BsaI	GGTCTC	2 cut(s)	428, 1060
BsaWI	WCCGGW	4 cut(s)	835, 1088, 2083, 2364
BsaXI	ACNNNNNCTCC	4 cut(s)	976, 1006, 2228, 2258
Bsc4I	CCNNNNNNNGG	9 cut(s)	119, 480, 623, 1140, 1328, 1394, 1502, 2134, 2254
Bse118I	RCCGGY	2 cut(s)	2083, 2364
Bse1I	ACTGG	3 cut(s)	54, 830, 2096
Bse3DI	GCAATG	1 cut(s)	2145
BseAI	TCCGGA	1 cut(s)	835
BseBI	CCWGG	8 cut(s)	224, 481, 866, 1136, 1299, 1311, 1718, 2202
BseLI	CCNNNNNNNGG	9 cut(s)	119, 480, 623, 1140, 1328, 1394, 1502, 2134, 2254
BseMI	GCAATG	1 cut(s)	2145
BseMII	CTCAG	5 cut(s)	444, 1341, 1382, 1646, 2401
BseNI	ACTGG	3 cut(s)	54, 830, 2096
BseRI	GAGGAG	1 cut(s)	984
BseXI	GCAGC	4 cut(s)	461, 1515, 1864, 2156
BseYI	CCCAGC	2 cut(s)	269, 523
BsgI	GTGCAG	1 cut(s)	2219
Bsh1236I	CGCG	1 cut(s)	930
BshFI	GGCC	8 cut(s)	117, 123, 222, 248, 829, 852, 956, 1507
BshNI	GGYRCC	1 cut(s)	1990
BshTI	ACCGGT	2 cut(s)	2083, 2364
BsiHKAI	GWGCWC	2 cut(s)	513, 699
BsiHKCI	CYCGRG	1 cut(s)	678
BsiSI	CCGG	6 cut(s)	113, 836, 965, 1089, 2084, 2365
BsiWI	CGTACG	1 cut(s)	1815
BslFI	GGGAC	4 cut(s)	270, 315, 915, 1730
BslI	CCNNNNNNNGG	9 cut(s)	119, 480, 623, 1140, 1328, 1394, 1502, 2134, 2254
BsmAI	GTCTC	3 cut(s)	428, 763, 1060
BsmFI	GGGAC	4 cut(s)	270, 315, 915, 1730
BsnI	GGCC	8 cut(s)	117, 123, 222, 248, 829, 852, 956, 1507
Bso31I	GGTCTC	2 cut(s)	428, 1060
BsoBI	CYCGRG	1 cut(s)	678
Bsp1286I	GDGCHC	2 cut(s)	513, 699
Bsp13I	TCCGGA	1 cut(s)	835
Bsp143I	GATC	6 cut(s)	183, 240, 946, 1929, 2191, 2223
Bsp19I	CCATGG	5 cut(s)	118, 1243, 1501, 1523, 2298
BspACI	CCGC	4 cut(s)	299, 745, 1271, 1379
BspANI	GGCC	8 cut(s)	117, 123, 222, 248, 829, 852, 956, 1507
BspCNI	CTCAG	5 cut(s)	445, 1340, 1381, 1647, 2400
BspEI	TCCGGA	1 cut(s)	835
BspFNI	CGCG	1 cut(s)	930
BspHI	TCATGA	1 cut(s)	699
BspLI	GGNNCC	5 cut(s)	35, 258, 1258, 1307, 1992
BspMAI	CTGCAG	1 cut(s)	1176
BspMI	ACCTGC	2 cut(s)	1070, 1179
BspOI	GCTAGC	1 cut(s)	2348
BspPI	GGATC	3 cut(s)	191, 1937, 2199
BspQI	GCTCTTC	3 cut(s)	416, 1432, 1476
BspT107I	GGYRCC	1 cut(s)	1990
BspTNI	GGTCTC	2 cut(s)	428, 1060
BsrDI	GCAATG	1 cut(s)	2145
BsrFI	RCCGGY	2 cut(s)	2083, 2364
BsrI	ACTGG	3 cut(s)	54, 830, 2096
BssAI	RCCGGY	2 cut(s)	2083, 2364
BssMI	GATC	6 cut(s)	183, 240, 946, 1929, 2191, 2223
BssSI	CACGAG	1 cut(s)	1599
BssT1I	CCWWGG	7 cut(s)	118, 294, 1053, 1243, 1501, 1523, 2298
Bst2BI	CACGAG	1 cut(s)	1599
Bst2UI	CCWGG	8 cut(s)	224, 481, 866, 1136, 1299, 1311, 1718, 2202
Bst4CI	ACNGT	7 cut(s)	149, 355, 427, 650, 898, 1397, 2240
Bst6I	CTCTTC	8 cut(s)	416, 1432, 1455, 1476, 1595, 1649, 1816, 1831
BstC8I	GCNNGC	5 cut(s)	530, 1023, 1271, 2183, 2346
BstDEI	CTNAG	8 cut(s)	92, 453, 739, 1327, 1368, 1509, 1655, 2387
BstDSI	CCRYGG	6 cut(s)	118, 1243, 1501, 1523, 2176, 2298
BstFNI	CGCG	1 cut(s)	930
BstH2I	RGCGCY	3 cut(s)	645, 1565, 1986
BstHHI	GCGC	4 cut(s)	644, 1557, 1564, 1985
BstKTI	GATC	6 cut(s)	186, 243, 949, 1932, 2194, 2226
BstMAI	GTCTC	3 cut(s)	428, 763, 1060
BstMBI	GATC	6 cut(s)	183, 240, 946, 1929, 2191, 2223
BstMWI	GCNNNNNNNGC	7 cut(s)	529, 1492, 1561, 1622, 1805, 2033, 2178
BstNI	CCWGG	8 cut(s)	224, 481, 866, 1136, 1299, 1311, 1718, 2202
BstNSI	RCATGY	1 cut(s)	1897
BstSFI	CTRYAG	2 cut(s)	1172, 2310
BstUI	CGCG	1 cut(s)	930
BstV1I	GCAGC	4 cut(s)	461, 1515, 1864, 2156
BstV2I	GAAGAC	4 cut(s)	795, 1411, 1443, 1629
BstX2I	RGATCY	1 cut(s)	2191
BstXI	CCANNNNNNTGG	1 cut(s)	815
BstYI	RGATCY	1 cut(s)	2191
BsuRI	GGCC	8 cut(s)	117, 123, 222, 248, 829, 852, 956, 1507
BtgI	CCRYGG	6 cut(s)	118, 1243, 1501, 1523, 2176, 2298
BtsI	GCAGTG	3 cut(s)	234, 596, 1186
BtsIMutI	CAGTG	6 cut(s)	154, 234, 596, 655, 1186, 1431
BveI	ACCTGC	2 cut(s)	1070, 1179
Cac8I	GCNNGC	5 cut(s)	530, 1023, 1271, 2183, 2346
CciI	TCATGA	1 cut(s)	699
CfoI	GCGC	4 cut(s)	644, 1557, 1564, 1985
Cfr10I	RCCGGY	2 cut(s)	2083, 2364
Cfr13I	GGNCC	6 cut(s)	115, 257, 1305, 1505, 2204, 2383
CseI	GACGC	1 cut(s)	2060
Csp6I	GTAC	6 cut(s)	922, 1401, 1816, 1991, 2125, 2241
CspAI	ACCGGT	2 cut(s)	2083, 2364
CspCI	CAANNNNNGTGG	2 cut(s)	780, 815
CviQI	GTAC	6 cut(s)	922, 1401, 1816, 1991, 2125, 2241
DdeI	CTNAG	8 cut(s)	92, 453, 739, 1327, 1368, 1509, 1655, 2387
DpnI	GATC	6 cut(s)	185, 242, 948, 1931, 2193, 2225
DpnII	GATC	6 cut(s)	183, 240, 946, 1929, 2191, 2223
DraIII	CACNNNGTG	1 cut(s)	2182
DrdI	GACNNNNNNGTC	2 cut(s)	914, 1229
DriI	GACNNNNNGTC	1 cut(s)	624
DseDI	GACNNNNNNGTC	2 cut(s)	914, 1229
EaeI	YGGCCR	3 cut(s)	220, 246, 954
Eam1104I	CTCTTC	8 cut(s)	416, 1432, 1455, 1476, 1595, 1649, 1816, 1831
Eam1105I	GACNNNNNGTC	1 cut(s)	624
EarI	CTCTTC	8 cut(s)	416, 1432, 1455, 1476, 1595, 1649, 1816, 1831
Ecl136II	GAGCTC	1 cut(s)	511
Eco130I	CCWWGG	7 cut(s)	118, 294, 1053, 1243, 1501, 1523, 2298
Eco24I	GRGCYC	1 cut(s)	513
Eco31I	GGTCTC	2 cut(s)	428, 1060
Eco32I	GATATC	1 cut(s)	2305
Eco47I	GGWCC	4 cut(s)	257, 1305, 2204, 2383
Eco47III	AGCGCT	3 cut(s)	643, 1563, 1984
Eco53kI	GAGCTC	1 cut(s)	511
Eco57I	CTGAAG	2 cut(s)	1405, 1455
Eco88I	CYCGRG	1 cut(s)	678
EcoICRI	GAGCTC	1 cut(s)	511
EcoO109I	RGGNCCY	2 cut(s)	257, 1305
EcoRI	GAATTC	2 cut(s)	128, 2153
EcoRII	CCWGG	8 cut(s)	222, 479, 864, 1134, 1297, 1309, 1716, 2200
EcoRV	GATATC	1 cut(s)	2305
EcoT14I	CCWWGG	7 cut(s)	118, 294, 1053, 1243, 1501, 1523, 2298
EcoT38I	GRGCYC	1 cut(s)	513
ErhI	CCWWGG	7 cut(s)	118, 294, 1053, 1243, 1501, 1523, 2298
FalI	AAGNNNNNCTT	4 cut(s)	186, 218, 1470, 1502
FaqI	GGGAC	4 cut(s)	270, 315, 915, 1730
FauI	CCCGC	3 cut(s)	292, 1278, 1386
FauNDI	CATATG	1 cut(s)	1444
FblI	GTMKAC	1 cut(s)	46
Fnu4HI	GCNGC	4 cut(s)	450, 1529, 1878, 2170
FriOI	GRGCYC	1 cut(s)	513
Fsp4HI	GCNGC	4 cut(s)	450, 1529, 1878, 2170
FspBI	CTAG	7 cut(s)	261, 758, 905, 1202, 1290, 2210, 2345
GlaI	GCGC	4 cut(s)	643, 1556, 1563, 1984
GluI	GCNGC	4 cut(s)	450, 1529, 1878, 2170
GsaI	CCCAGC	2 cut(s)	273, 527
GsuI	CTGGAG	3 cut(s)	1095, 1281, 2113
HaeII	RGCGCY	3 cut(s)	645, 1565, 1986
HaeIII	GGCC	8 cut(s)	117, 123, 222, 248, 829, 852, 956, 1507
HapII	CCGG	6 cut(s)	113, 836, 965, 1089, 2084, 2365
HgaI	GACGC	1 cut(s)	2060
HhaI	GCGC	4 cut(s)	644, 1557, 1564, 1985
Hin6I	GCGC	4 cut(s)	642, 1555, 1562, 1983
HinP1I	GCGC	4 cut(s)	642, 1555, 1562, 1983
HincII	GTYRAC	1 cut(s)	423
HindII	GTYRAC	1 cut(s)	423
HindIII	AAGCTT	1 cut(s)	195
HpaII	CCGG	6 cut(s)	113, 836, 965, 1089, 2084, 2365
HphI	GGTGA	5 cut(s)	248, 854, 1094, 1892, 1945
Hpy166II	GTNNAC	3 cut(s)	47, 423, 2089
Hpy188I	TCNGA	3 cut(s)	2049, 2191, 2390
Hpy8I	GTNNAC	3 cut(s)	47, 423, 2089
Hpy99I	CGWCG	2 cut(s)	935, 1269
HpyAV	CCTTC	7 cut(s)	320, 448, 553, 603, 726, 819, 1296
HpyCH4III	ACNGT	7 cut(s)	149, 355, 427, 650, 898, 1397, 2240
HpyCH4IV	ACGT	1 cut(s)	1818
HpyF10VI	GCNNNNNNNGC	7 cut(s)	529, 1492, 1561, 1622, 1805, 2033, 2178
HpyF3I	CTNAG	8 cut(s)	92, 453, 739, 1327, 1368, 1509, 1655, 2387
HpySE526I	ACGT	1 cut(s)	1818
HspAI	GCGC	4 cut(s)	642, 1555, 1562, 1983
Kpn2I	TCCGGA	1 cut(s)	835
KpnI	GGTACC	1 cut(s)	1994
Kzo9I	GATC	6 cut(s)	183, 240, 946, 1929, 2191, 2223
LguI	GCTCTTC	3 cut(s)	416, 1432, 1476
LmnI	GCTCC	4 cut(s)	33, 516, 1076, 2234
Lsp1109I	GCAGC	4 cut(s)	461, 1515, 1864, 2156
LweI	GCATC	7 cut(s)	280, 384, 699, 945, 1022, 1729, 1962
MaeI	CTAG	7 cut(s)	261, 758, 905, 1202, 1290, 2210, 2345
MaeII	ACGT	1 cut(s)	1818
MaeIII	GTNAC	3 cut(s)	151, 355, 1997
MalI	GATC	6 cut(s)	185, 242, 948, 1931, 2193, 2225
MboI	GATC	6 cut(s)	183, 240, 946, 1929, 2191, 2223
MfeI	CAATTG	1 cut(s)	568
MflI	RGATCY	1 cut(s)	2191
MhlI	GDGCHC	2 cut(s)	513, 699
MlsI	TGGCCA	3 cut(s)	222, 248, 956
MluNI	TGGCCA	3 cut(s)	222, 248, 956
MlyI	GAGTC	5 cut(s)	52, 510, 626, 1276, 1433
Mox20I	TGGCCA	3 cut(s)	222, 248, 956
MroI	TCCGGA	1 cut(s)	835
MscI	TGGCCA	3 cut(s)	222, 248, 956
MseI	TTAA	5 cut(s)	207, 876, 1029, 2066, 2121
MslI	CAYNNNNRTG	1 cut(s)	374
Msp20I	TGGCCA	3 cut(s)	222, 248, 956
MspA1I	CMGCKG	2 cut(s)	452, 523
MspI	CCGG	6 cut(s)	113, 836, 965, 1089, 2084, 2365
MunI	CAATTG	1 cut(s)	568
MvaI	CCWGG	8 cut(s)	224, 481, 866, 1136, 1299, 1311, 1718, 2202
MvnI	CGCG	1 cut(s)	930
MwoI	GCNNNNNNNGC	7 cut(s)	529, 1492, 1561, 1622, 1805, 2033, 2178
NciI	CCSGG	2 cut(s)	114, 965
NcoI	CCATGG	5 cut(s)	118, 1243, 1501, 1523, 2298
NdeI	CATATG	1 cut(s)	1444
NdeII	GATC	6 cut(s)	183, 240, 946, 1929, 2191, 2223
NheI	GCTAGC	1 cut(s)	2344
NlaIV	GGNNCC	5 cut(s)	35, 258, 1258, 1307, 1992
NspI	RCATGY	1 cut(s)	1897
PaeR7I	CTCGAG	1 cut(s)	678
PagI	TCATGA	1 cut(s)	699
PaqCI	CACCTGC	2 cut(s)	1070, 1179
PciSI	GCTCTTC	3 cut(s)	416, 1432, 1476
PfeI	GAWTC	7 cut(s)	109, 890, 1085, 1573, 1664, 1784, 2391
Pfl23II	CGTACG	1 cut(s)	1815
PflMI	CCANNNNNTGG	2 cut(s)	1502, 2254
PfoI	TCCNGGA	2 cut(s)	864, 1297
PinAI	ACCGGT	2 cut(s)	2083, 2364
PkrI	GCNGC	4 cut(s)	451, 1530, 1879, 2171
PleI	GAGTC	5 cut(s)	51, 509, 626, 1276, 1433
PpsI	GAGTC	5 cut(s)	51, 509, 626, 1276, 1433
PpuMI	RGGWCCY	2 cut(s)	257, 1305
Psp124BI	GAGCTC	1 cut(s)	513
Psp5II	RGGWCCY	2 cut(s)	257, 1305
Psp6I	CCWGG	8 cut(s)	222, 479, 864, 1134, 1297, 1309, 1716, 2200
PspFI	CCCAGC	2 cut(s)	269, 523
PspGI	CCWGG	8 cut(s)	222, 479, 864, 1134, 1297, 1309, 1716, 2200
PspLI	CGTACG	1 cut(s)	1815
PspN4I	GGNNCC	5 cut(s)	35, 258, 1258, 1307, 1992
PspPI	GGNCC	6 cut(s)	115, 257, 1305, 1505, 2204, 2383
PspPPI	RGGWCCY	2 cut(s)	257, 1305
PspXI	VCTCGAGB	1 cut(s)	678
PsrI	GAACNNNNNNTAC	2 cut(s)	343, 375
PstI	CTGCAG	1 cut(s)	1176
PsuI	RGATCY	1 cut(s)	2191
PvuII	CAGCTG	2 cut(s)	452, 523
RsaI	GTAC	6 cut(s)	923, 1402, 1817, 1992, 2126, 2242
RsaNI	GTAC	6 cut(s)	922, 1401, 1816, 1991, 2125, 2241
RseI	CAYNNNNRTG	1 cut(s)	374
SacI	GAGCTC	1 cut(s)	513
SapI	GCTCTTC	3 cut(s)	416, 1432, 1476
SaqAI	TTAA	5 cut(s)	207, 876, 1029, 2066, 2121
SatI	GCNGC	4 cut(s)	450, 1529, 1878, 2170
Sau3AI	GATC	6 cut(s)	183, 240, 946, 1929, 2191, 2223
Sau96I	GGNCC	6 cut(s)	115, 257, 1305, 1505, 2204, 2383
ScaI	AGTACT	1 cut(s)	1402
SchI	GAGTC	5 cut(s)	52, 510, 626, 1276, 1433
SduI	GDGCHC	2 cut(s)	513, 699
SfaNI	GCATC	7 cut(s)	280, 384, 699, 945, 1022, 1729, 1962
SfcI	CTRYAG	2 cut(s)	1172, 2310
Sfr274I	CTCGAG	1 cut(s)	678
SinI	GGWCC	4 cut(s)	257, 1305, 2204, 2383
SlaI	CTCGAG	1 cut(s)	678
SmiMI	CAYNNNNRTG	1 cut(s)	374
SmlI	CTYRAG	4 cut(s)	38, 312, 678, 854
SmoI	CTYRAG	4 cut(s)	38, 312, 678, 854
SsiI	CCGC	4 cut(s)	299, 745, 1271, 1379
SspMI	CTAG	7 cut(s)	261, 758, 905, 1202, 1290, 2210, 2345
SstI	GAGCTC	1 cut(s)	513
StyI	CCWWGG	7 cut(s)	118, 294, 1053, 1243, 1501, 1523, 2298
TaaI	ACNGT	7 cut(s)	149, 355, 427, 650, 898, 1397, 2240
TaiI	ACGT	1 cut(s)	1821
TaqI	TCGA	3 cut(s)	101, 288, 679
TatI	WGTACW	1 cut(s)	1400
TfiI	GAWTC	7 cut(s)	109, 890, 1085, 1573, 1664, 1784, 2391
Tru1I	TTAA	5 cut(s)	207, 876, 1029, 2066, 2121
Tru9I	TTAA	5 cut(s)	207, 876, 1029, 2066, 2121
TscAI	CASTG	6 cut(s)	154, 234, 603, 655, 1186, 1438
TseI	GCWGC	4 cut(s)	449, 1528, 1877, 2169
TspGWI	ACGGA	1 cut(s)	319
TspRI	CASTG	6 cut(s)	154, 234, 603, 655, 1186, 1438
Van91I	CCANNNNNTGG	2 cut(s)	1502, 2254
VpaK11BI	GGWCC	4 cut(s)	257, 1305, 2204, 2383
XapI	RAATTY	5 cut(s)	78, 128, 1120, 1922, 2153
XceI	RCATGY	1 cut(s)	1897
XhoI	CTCGAG	1 cut(s)	678
XmiI	GTMKAC	1 cut(s)	46
XspI	CTAG	7 cut(s)	261, 758, 905, 1202, 1290, 2210, 2345
ZrmI	AGTACT	1 cut(s)	1402

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.