Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0012623

Physical Location & Seq

Genomic Coordinates Forward (+)

38791524 .. 38794662

Gene Structure 3139 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG344200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2385 bp

ATGAGCATCATGGCAATGTCAAAGGCAAAGATAGGGCGGAATGAAACAAAGAAAAGCCTTGAGAGTTTATTGGACATGGACAAAATAGTAGCTGCAAAGATTTCTGTTCCACTTCAATTGTCGAAGATGATTCCAGGCCAAGGCCTTGAATTCAACAACCTTTCCTACAGTGTAACAAAACAAATAAAGAAAGATGGGGTTTGGATCAAGAAGGAAGCTTATCTTCTTAATGACATCTCTGGTCATGCAGTACAAGGTGAGATTATGGCCATTATGGGGCCTAGTGGTGCTGGAAAATCCACATTTCTCGATGCCTTAGCAGGAAGGATTGCTCAAGGAAGTCTTGAAGGCTCTGTTAGAGTTGATGGAAAAACTGTTACTACAAGCTACATGAAGATGGTTTCCTCTTATGTGATGCAAGATGACCAACTATTCCCAATGTTGACCGTGTTTGAGACTTTCATGTTTGCAGCTGAGGTTAGGCTTCCTCCTTCTCTTTCCAATGATGAGAAGAGAAAGAGAGTCTATGAGCTCCTTGACCAACTCGGCTTGCAGACTGCAACACATACATATATTGGTGATGAGGGGAGGAGAGGAGTCTCAGGAGGTGAAAGACGCAGGGTATCAATCGGAATTGATATCATCCACAAACCTTCTCTACTGTTTCTTGATGAACCAACTTCTGGTCTTGACTCCACAAGTGCTTACAGTGTTGTAGAGAAGGTGAAAGAAATAGCTCGGGGCGGTAGCATTGTGCTCATGACTATCCATCAGCCTTCCTATCGTATTCAAAATCTCTTGGACCGCATGACAGTCCTAGCAAGAGGAAAACTAATATATTTGGGAAGTCCACATGGTTTGTCTGCTCACCTTTCTGGATTTGGAAGGCCAGTTCCTGATGGAGAAAACAACCTTGAGTATCTCCTGGATGTGATTAGAGAATTTGATGAGTCAAATGTAGGACTAGAACCTCTTGTTGTCTACCTTCGCGATGGAATCAAACCTGGTCAGGAGCAACTCACACCTGGACCAAATTCTCGCCCATCTGATGATTATGATGATGAGGAGGATGATGAGTTTGAGGATGAGAAATTTGACAACTCCCTGGAAAGGAAATCAATTCAGACACCAATGCAGCACTTTAGAAGTGGTGTCTATAACCCTCGTTTAGCTTCACATTTCTACAAAGATTTCTCAGTGTGGATATATCATGGTGTCAAAGGAACTCCTCGCCGCCCACCATCATGGACTCCTGCTAGAACTCCAGGAAGGACCCCTGGAAAGACACCAATCTCAGTGTCAAGACTAAGAAGTGTTGTTGAAAACCAATATGCAACACCTCAGCACTACCCTTCTAGGCCTAGTAGGACTAAAGCCCCTATTATCTATATCCCTTCCATCGAGGACTCTTCATATGGACAATCATATGAAGAGTTTGAGATGGAAGAAGTTGAGCTTGATGAGATAGAACTCGGGCCTAAGTTTGCAAACCCCTGGCTCCGTGAAGTTGCAGTCCTCTCATGGCGTACAGCACTCAATGTGATTCGTACCCCTGAACTCTTCCTCTCACGAGAGATTGTGTTGGCTGTCATGGCACTCATTCTATCTTCCCTTTTTAATAACCTACATGAGGAGAACTTCAAAAATGTAAACAGGCTTCTCAACTTCTACATATTTGCTATTTGCCTGGTCTTCTTTTCCTCCAATGATGCTGTCCCAACTTTCATCCAAGAAAGGTTCATTTTCATCAGGGAAACTTCCCATAATGCTTACCGTGCTTCTTCCTACGTCATATCTTCCCTTATTGTTTACCTCCCATTTTTCGCCATTCAAGCTTTCACATTTGCTGCCATAACCAGATTCATGCTTCACCTCAGAAGTAGTCTTTTCTACTTTTGGATAATCCTGTATGCCTCACTTATAACCACCAATGCTTATGTCATGCTTGTGAGTGCCCTGGTTCCTAGTTACATTACTGGATATGCTGTAGTGATAGCTACCACAGCTCTGTTCTTTCTCACTTGCGGTTTTTTCTTGAAACGTACTCAGATCCCAAATTACTGGGTTTGGGTGCACTACATCTCTGCGATTAAGTACCCATTTGAGGCAATGCTAACAAATGAATTCAAAAATATACACTGCTACACTGGCAATGCAGCGGATCTTTCACCTGGGCCTTTAGGAGATCTGAAGTTGAGTAAAGTGCACAATGACACACCATCCCTCAGAGGTTGCCTGCTGATTGGACAAGATGTTATACAGTCAATGGATATCAATCACGATAACATCTGGTATGATATAGGAATCTTGCTAGCTTGGGGTGTTCTATACCGGCTTCTCTTCTACATGGTCCTCAGATTCTATTCCAAGAATGAGAGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005775 GO:0005886 GO:0006810 GO:0007034 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009987 GO:0010208 GO:0010927 GO:0015399 GO:0015405 GO:0015893 GO:0016020 GO:0016021 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0022804 GO:0022857 GO:0030198 GO:0031224 GO:0031974 GO:0032501 GO:0032502 GO:0032989 GO:0042221 GO:0042493 GO:0042623 GO:0042626 GO:0042891 GO:0043062 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043492 GO:0044085 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045229 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0070013 GO:0071840 GO:0071944 GO:0085029

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

794

Amino Acids

89.89

Weight (kDa)

6.65

Isoelectric Point (pI)

41.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	76 - 228	5.9e-29	ABC transporter
ABC2_membrane	PF01061	502 - 709	1.8e-38	ABC-2 type transporter
ABC2_membrane_3	PF12698	544 - 781	2.9e-07	ABC-2 family transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012623)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g17530
malus_domestica	MD06G1228700.v1.1 MD14G1237900.v1.1
prunus_persica	Prupe.5G235100_v2.0.a1
pyrus_communis	pycom06g20500 pycom14g19900
rosa_chinensis	RchiOBHm_Chr3g0493261 RchiOBHm_Chr7g0178121
rosa_laevigata	RLG00000005469
rosa_multiflora	Rmu_sc0000425.1_g000011 Rmu_sc0005324.1_g000001
rosa_roxburghii	Rroxscaffold_6G00391680
rosa_rugosa	Rorug03G0260000 Rorug06G0413700
rosa_samantha	Rh3DG344200 Rh7CG012900 Rh7DG013200
rosa_wichuraiana	Rw3G027160 Rw7G001030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1922
AccB7I	CCANNNNNTGG	1 cut(s)	683
AccI	GTMKAC	1 cut(s)	981
AccII	CGCG	1 cut(s)	990
AciI	CCGC	6 cut(s)	37, 744, 805, 1234, 2025, 2159
AclWI	GGATC	3 cut(s)	212, 2044, 2169
AcoI	YGGCCR	1 cut(s)	267
AcsI	RAATTY	5 cut(s)	149, 941, 1033, 1091, 2123
AcuI	CTGAAG	1 cut(s)	2210
AfaI	GTAC	5 cut(s)	252, 1528, 1549, 2044, 2096
AfiI	CCNNNNNNNGG	6 cut(s)	140, 276, 683, 1110, 1630, 2104
AloI	GAACNNNNNNTCC	2 cut(s)	876, 908
Alw21I	GWGCWC	4 cut(s)	534, 759, 2076, 2208
Alw26I	GTCTC	2 cut(s)	449, 604
Alw44I	GTGCAC	2 cut(s)	2072, 2204
AlwI	GGATC	3 cut(s)	212, 2044, 2169
AlwNI	CAGNNNCTG	1 cut(s)	896
Ama87I	CYCGRG	2 cut(s)	738, 1472
AoxI	GGCC	8 cut(s)	136, 142, 267, 278, 887, 1358, 1475, 2174
ApaLI	GTGCAC	2 cut(s)	2072, 2204
ApeKI	GCWGC	5 cut(s)	92, 470, 1135, 1847, 2156
ApoI	RAATTY	5 cut(s)	149, 941, 1033, 1091, 2123
AspS9I	GGNCC	7 cut(s)	278, 802, 1028, 1272, 1475, 2174, 2350
AsuHPI	GGTGA	7 cut(s)	269, 590, 620, 736, 860, 1862, 2160
AsuNHI	GCTAGC	1 cut(s)	2311
AvaI	CYCGRG	2 cut(s)	738, 1472
AvaII	GGWCC	4 cut(s)	802, 1028, 1272, 2350
BaeGI	GKGCMC	3 cut(s)	1957, 2076, 2208
BalI	TGGCCA	1 cut(s)	269
BanII	GRGCYC	1 cut(s)	534
BarI	GAAGNNNNNNTAC	2 cut(s)	1641, 1673
BauI	CACGAG	1 cut(s)	1569
BbsI	GAAGAC	1 cut(s)	1684
Bbv12I	GWGCWC	4 cut(s)	534, 759, 2076, 2208
BbvCI	CCTCAGC	2 cut(s)	474, 1341
BbvI	GCAGC	5 cut(s)	79, 482, 1147, 1834, 2168
BcoDI	GTCTC	2 cut(s)	449, 604
BfaI	CTAG	8 cut(s)	282, 818, 965, 1257, 1356, 1362, 1965, 2312
BfmI	CTRYAG	2 cut(s)	166, 1986
BglII	AGATCT	1 cut(s)	2185
BisI	GCNGC	6 cut(s)	93, 471, 1136, 1234, 1848, 2157
BlsI	GCNGC	6 cut(s)	94, 472, 1137, 1235, 1849, 2158
Bme18I	GGWCC	4 cut(s)	802, 1028, 1272, 2350
BmeT110I	CYCGRG	2 cut(s)	738, 1472
BmgT120I	GGNCC	7 cut(s)	278, 802, 1028, 1272, 1475, 2174, 2350
BmiI	GGNNCC	4 cut(s)	279, 1274, 1499, 1962
BmrI	ACTGGG	1 cut(s)	2071
BmsI	GCATC	4 cut(s)	15, 301, 405, 1699
BmtI	GCTAGC	1 cut(s)	2315
BmuI	ACTGGG	1 cut(s)	2071
BpiI	GAAGAC	1 cut(s)	1684
BpmI	CTGGAG	1 cut(s)	1248
Bpu10I	CCTNAGC	3 cut(s)	316, 474, 1341
BpuEI	CTTGAG	3 cut(s)	80, 318, 935
BsaBI	GATNNNNATC	1 cut(s)	2274
BsaJI	CCNNGG	6 cut(s)	139, 1104, 1276, 1493, 1956, 2171
Bsc4I	CCNNNNNNNGG	6 cut(s)	140, 276, 683, 1110, 1630, 2104
Bse118I	RCCGGY	1 cut(s)	2331
Bse1I	ACTGG	4 cut(s)	890, 1981, 2066, 2152
Bse3DI	GCAATG	3 cut(s)	21, 2115, 2158
Bse8I	GATNNNNATC	1 cut(s)	2274
BseDI	CCNNGG	6 cut(s)	139, 1104, 1276, 1493, 1956, 2171
BseGI	GGATG	6 cut(s)	642, 934, 1075, 1090, 1725, 2219
BseJI	GATNNNNATC	1 cut(s)	2274
BseLI	CCNNNNNNNGG	6 cut(s)	140, 276, 683, 1110, 1630, 2104
BseMI	GCAATG	3 cut(s)	21, 2115, 2158
BseMII	CTCAG	9 cut(s)	465, 615, 1209, 1308, 1355, 1888, 2060, 2239, 2368
BseNI	ACTGG	4 cut(s)	890, 1981, 2066, 2152
BseRI	GAGGAG	5 cut(s)	604, 609, 1079, 1218, 1646
BseSI	GKGCMC	3 cut(s)	1957, 2076, 2208
BseXI	GCAGC	5 cut(s)	79, 482, 1147, 1834, 2168
Bsh1236I	CGCG	1 cut(s)	990
BshFI	GGCC	8 cut(s)	138, 144, 269, 280, 889, 1360, 1477, 2176
BsiHKAI	GWGCWC	4 cut(s)	534, 759, 2076, 2208
BsiHKCI	CYCGRG	2 cut(s)	738, 1472
BsiSI	CCGG	1 cut(s)	2332
BslFI	GGGAC	1 cut(s)	1700
BslI	CCNNNNNNNGG	6 cut(s)	140, 276, 683, 1110, 1630, 2104
BsmAI	GTCTC	2 cut(s)	449, 604
BsmFI	GGGAC	1 cut(s)	1700
BsnI	GGCC	8 cut(s)	138, 144, 269, 280, 889, 1360, 1477, 2176
BsoBI	CYCGRG	2 cut(s)	738, 1472
Bsp1286I	GDGCHC	5 cut(s)	534, 759, 1957, 2076, 2208
Bsp143I	GATC	4 cut(s)	204, 2049, 2161, 2185
Bsp68I	TCGCGA	1 cut(s)	990
BspACI	CCGC	6 cut(s)	37, 744, 805, 1234, 2025, 2159
BspANI	GGCC	8 cut(s)	138, 144, 269, 280, 889, 1360, 1477, 2176
BspCNI	CTCAG	9 cut(s)	466, 614, 1208, 1307, 1354, 1887, 2059, 2238, 2367
BspFNI	CGCG	1 cut(s)	990
BspHI	TCATGA	1 cut(s)	759
BspLI	GGNNCC	4 cut(s)	279, 1274, 1499, 1962
BspOI	GCTAGC	1 cut(s)	2315
BspPI	GGATC	3 cut(s)	212, 2044, 2169
BsrDI	GCAATG	3 cut(s)	21, 2115, 2158
BsrFI	RCCGGY	1 cut(s)	2331
BsrI	ACTGG	4 cut(s)	890, 1981, 2066, 2152
BssAI	RCCGGY	1 cut(s)	2331
BssECI	CCNNGG	6 cut(s)	139, 1104, 1276, 1493, 1956, 2171
BssMI	GATC	4 cut(s)	204, 2049, 2161, 2185
BssSI	CACGAG	1 cut(s)	1569
BssT1I	CCWWGG	1 cut(s)	139
Bst2BI	CACGAG	1 cut(s)	1569
Bst4CI	ACNGT	8 cut(s)	170, 376, 448, 663, 710, 814, 1775, 2262
Bst6I	CTCTTC	5 cut(s)	506, 1414, 1425, 1565, 2345
BstC8I	GCNNGC	3 cut(s)	551, 2237, 2313
BstENI	CCTNNNNNAGG	1 cut(s)	1628
BstF5I	GGATG	6 cut(s)	642, 934, 1075, 1090, 1725, 2219
BstFNI	CGCG	1 cut(s)	990
BstKTI	GATC	4 cut(s)	207, 2052, 2164, 2188
BstMAI	GTCTC	2 cut(s)	449, 604
BstMBI	GATC	4 cut(s)	204, 2049, 2161, 2185
BstMWI	GCNNNNNNNGC	5 cut(s)	1592, 1775, 1832, 2003, 2148
BstSFI	CTRYAG	2 cut(s)	166, 1986
BstSLI	GKGCMC	3 cut(s)	1957, 2076, 2208
BstUI	CGCG	1 cut(s)	990
BstV1I	GCAGC	5 cut(s)	79, 482, 1147, 1834, 2168
BstV2I	GAAGAC	1 cut(s)	1684
BstX2I	RGATCY	3 cut(s)	2049, 2161, 2185
BstXI	CCANNNNNNTGG	2 cut(s)	1245, 2061
BstYI	RGATCY	3 cut(s)	2049, 2161, 2185
BsuRI	GGCC	8 cut(s)	138, 144, 269, 280, 889, 1360, 1477, 2176
BtgZI	GCGATG	1 cut(s)	1005
BtsCI	GGATG	6 cut(s)	642, 934, 1075, 1090, 1725, 2219
BtsI	GCAGTG	1 cut(s)	2137
BtsIMutI	CAGTG	6 cut(s)	175, 715, 1203, 1302, 2137, 2145
BtuMI	TCGCGA	1 cut(s)	990
Cac8I	GCNNGC	3 cut(s)	551, 2237, 2313
CaiI	CAGNNNCTG	1 cut(s)	896
CciI	TCATGA	1 cut(s)	759
Cfr10I	RCCGGY	1 cut(s)	2331
Cfr13I	GGNCC	7 cut(s)	278, 802, 1028, 1272, 1475, 2174, 2350
CseI	GACGC	1 cut(s)	624
CsiI	ACCWGGT	1 cut(s)	1003
Csp6I	GTAC	5 cut(s)	251, 1527, 1548, 2043, 2095
CspCI	CAANNNNNGTGG	4 cut(s)	99, 134, 840, 875
CviQI	GTAC	5 cut(s)	251, 1527, 1548, 2043, 2095
DpnI	GATC	4 cut(s)	206, 2051, 2163, 2187
DpnII	GATC	4 cut(s)	204, 2049, 2161, 2185
EaeI	YGGCCR	1 cut(s)	267
Eam1104I	CTCTTC	5 cut(s)	506, 1414, 1425, 1565, 2345
EarI	CTCTTC	5 cut(s)	506, 1414, 1425, 1565, 2345
EciI	GGCGGA	1 cut(s)	52
Ecl136II	GAGCTC	1 cut(s)	532
Eco130I	CCWWGG	1 cut(s)	139
Eco147I	AGGCCT	2 cut(s)	144, 1360
Eco24I	GRGCYC	1 cut(s)	534
Eco32I	GATATC	2 cut(s)	640, 2272
Eco47I	GGWCC	4 cut(s)	802, 1028, 1272, 2350
Eco53kI	GAGCTC	1 cut(s)	532
Eco57I	CTGAAG	1 cut(s)	2210
Eco88I	CYCGRG	2 cut(s)	738, 1472
EcoICRI	GAGCTC	1 cut(s)	532
EcoNI	CCTNNNNNAGG	1 cut(s)	1628
EcoO109I	RGGNCCY	2 cut(s)	278, 1272
EcoRI	GAATTC	2 cut(s)	149, 2123
EcoRV	GATATC	2 cut(s)	640, 2272
EcoT14I	CCWWGG	1 cut(s)	139
EcoT38I	GRGCYC	1 cut(s)	534
ErhI	CCWWGG	1 cut(s)	139
FalI	AAGNNNNNCTT	6 cut(s)	207, 239, 327, 359, 1440, 1472
FaqI	GGGAC	1 cut(s)	1700
FauNDI	CATATG	2 cut(s)	1414, 1426
FblI	GTMKAC	1 cut(s)	981
Fnu4HI	GCNGC	6 cut(s)	93, 471, 1136, 1234, 1848, 2157
FokI	GGATG	6 cut(s)	629, 941, 1082, 1097, 1712, 2206
FriOI	GRGCYC	1 cut(s)	534
Fsp4HI	GCNGC	6 cut(s)	93, 471, 1136, 1234, 1848, 2157
FspBI	CTAG	8 cut(s)	282, 818, 965, 1257, 1356, 1362, 1965, 2312
GluI	GCNGC	6 cut(s)	93, 471, 1136, 1234, 1848, 2157
GsuI	CTGGAG	1 cut(s)	1248
HaeIII	GGCC	8 cut(s)	138, 144, 269, 280, 889, 1360, 1477, 2176
HapII	CCGG	1 cut(s)	2332
HgaI	GACGC	1 cut(s)	624
HincII	GTYRAC	1 cut(s)	444
HindII	GTYRAC	1 cut(s)	444
HindIII	AAGCTT	2 cut(s)	216, 1833
HpaII	CCGG	1 cut(s)	2332
HphI	GGTGA	7 cut(s)	269, 590, 620, 736, 860, 1862, 2160
Hpy166II	GTNNAC	7 cut(s)	444, 851, 982, 1651, 1810, 2074, 2206
Hpy188I	TCNGA	8 cut(s)	632, 1048, 1125, 1877, 2049, 2190, 2228, 2357
Hpy8I	GTNNAC	7 cut(s)	444, 851, 982, 1651, 1810, 2074, 2206
HpyCH4III	ACNGT	8 cut(s)	170, 376, 448, 663, 710, 814, 1775, 2262
HpyCH4IV	ACGT	2 cut(s)	1788, 2041
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1592, 1775, 1832, 2003, 2148
HpySE526I	ACGT	2 cut(s)	1788, 2041
Kzo9I	GATC	4 cut(s)	204, 2049, 2161, 2185
LmnI	GCTCC	3 cut(s)	537, 1012, 1503
Lsp1109I	GCAGC	5 cut(s)	79, 482, 1147, 1834, 2168
LweI	GCATC	4 cut(s)	15, 301, 405, 1699
MabI	ACCWGGT	1 cut(s)	1003
MaeI	CTAG	8 cut(s)	282, 818, 965, 1257, 1356, 1362, 1965, 2312
MaeII	ACGT	2 cut(s)	1788, 2041
MaeIII	GTNAC	3 cut(s)	172, 376, 1967
MalI	GATC	4 cut(s)	206, 2051, 2163, 2187
MboI	GATC	4 cut(s)	204, 2049, 2161, 2185
MfeI	CAATTG	1 cut(s)	116
MflI	RGATCY	3 cut(s)	2049, 2161, 2185
MhlI	GDGCHC	5 cut(s)	534, 759, 1957, 2076, 2208
MlsI	TGGCCA	1 cut(s)	269
MluCI	AATT	9 cut(s)	116, 149, 633, 941, 1033, 1091, 1119, 2056, 2123
MluNI	TGGCCA	1 cut(s)	269
MlyI	GAGTC	6 cut(s)	531, 606, 686, 959, 1243, 1400
Mox20I	TGGCCA	1 cut(s)	269
MscI	TGGCCA	1 cut(s)	269
MseI	TTAA	3 cut(s)	228, 1617, 2091
MslI	CAYNNNNRTG	4 cut(s)	14, 395, 1243, 1946
Msp20I	TGGCCA	1 cut(s)	269
MspA1I	CMGCKG	2 cut(s)	473, 2159
MspI	CCGG	1 cut(s)	2332
MunI	CAATTG	1 cut(s)	116
MvnI	CGCG	1 cut(s)	990
MwoI	GCNNNNNNNGC	5 cut(s)	1592, 1775, 1832, 2003, 2148
NdeI	CATATG	2 cut(s)	1414, 1426
NdeII	GATC	4 cut(s)	204, 2049, 2161, 2185
NheI	GCTAGC	1 cut(s)	2311
NlaIV	GGNNCC	4 cut(s)	279, 1274, 1499, 1962
NmeAIII	GCCGAG	1 cut(s)	525
NruI	TCGCGA	1 cut(s)	990
PagI	TCATGA	1 cut(s)	759
PceI	AGGCCT	2 cut(s)	144, 1360
PfeI	GAWTC	6 cut(s)	130, 996, 1543, 1860, 2304, 2358
PflMI	CCANNNNNTGG	1 cut(s)	683
PfoI	TCCNGGA	2 cut(s)	924, 1264
PkrI	GCNGC	6 cut(s)	94, 472, 1137, 1235, 1849, 2158
PleI	GAGTC	6 cut(s)	530, 605, 686, 958, 1243, 1400
PpsI	GAGTC	6 cut(s)	530, 605, 686, 958, 1243, 1400
PpuMI	RGGWCCY	1 cut(s)	1272
PsiI	TTATAA	1 cut(s)	1922
Psp124BI	GAGCTC	1 cut(s)	534
Psp5II	RGGWCCY	1 cut(s)	1272
PspN4I	GGNNCC	4 cut(s)	279, 1274, 1499, 1962
PspPI	GGNCC	7 cut(s)	278, 802, 1028, 1272, 1475, 2174, 2350
PspPPI	RGGWCCY	1 cut(s)	1272
PstNI	CAGNNNCTG	1 cut(s)	896
PsuI	RGATCY	3 cut(s)	2049, 2161, 2185
PvuII	CAGCTG	1 cut(s)	473
RruI	TCGCGA	1 cut(s)	990
RsaI	GTAC	5 cut(s)	252, 1528, 1549, 2044, 2096
RsaNI	GTAC	5 cut(s)	251, 1527, 1548, 2043, 2095
RseI	CAYNNNNRTG	4 cut(s)	14, 395, 1243, 1946
SacI	GAGCTC	1 cut(s)	534
SaqAI	TTAA	3 cut(s)	228, 1617, 2091
SatI	GCNGC	6 cut(s)	93, 471, 1136, 1234, 1848, 2157
Sau3AI	GATC	4 cut(s)	204, 2049, 2161, 2185
Sau96I	GGNCC	7 cut(s)	278, 802, 1028, 1272, 1475, 2174, 2350
SchI	GAGTC	6 cut(s)	531, 606, 686, 959, 1243, 1400
SduI	GDGCHC	5 cut(s)	534, 759, 1957, 2076, 2208
SexAI	ACCWGGT	1 cut(s)	1003
SfaNI	GCATC	4 cut(s)	15, 301, 405, 1699
SfcI	CTRYAG	2 cut(s)	166, 1986
SinI	GGWCC	4 cut(s)	802, 1028, 1272, 2350
SmiMI	CAYNNNNRTG	4 cut(s)	14, 395, 1243, 1946
SmlI	CTYRAG	3 cut(s)	59, 333, 914
SmoI	CTYRAG	3 cut(s)	59, 333, 914
Sse9I	AATT	9 cut(s)	116, 149, 633, 941, 1033, 1091, 1119, 2056, 2123
SseBI	AGGCCT	2 cut(s)	144, 1360
SsiI	CCGC	6 cut(s)	37, 744, 805, 1234, 2025, 2159
SspMI	CTAG	8 cut(s)	282, 818, 965, 1257, 1356, 1362, 1965, 2312
SstI	GAGCTC	1 cut(s)	534
StuI	AGGCCT	2 cut(s)	144, 1360
StyI	CCWWGG	1 cut(s)	139
TaaI	ACNGT	8 cut(s)	170, 376, 448, 663, 710, 814, 1775, 2262
TaiI	ACGT	2 cut(s)	1791, 2044
TaqI	TCGA	3 cut(s)	122, 309, 1401
TasI	AATT	9 cut(s)	116, 149, 633, 941, 1033, 1091, 1119, 2056, 2123
TatI	WGTACW	1 cut(s)	250
TauI	GCSGC	1 cut(s)	1236
TfiI	GAWTC	6 cut(s)	130, 996, 1543, 1860, 2304, 2358
Tru1I	TTAA	3 cut(s)	228, 1617, 2091
Tru9I	TTAA	3 cut(s)	228, 1617, 2091
TscAI	CASTG	6 cut(s)	175, 715, 1203, 1302, 2144, 2152
TseI	GCWGC	5 cut(s)	92, 470, 1135, 1847, 2156
TspGWI	ACGGA	1 cut(s)	1490
TspRI	CASTG	6 cut(s)	175, 715, 1203, 1302, 2144, 2152
Van91I	CCANNNNNTGG	1 cut(s)	683
VneI	GTGCAC	2 cut(s)	2072, 2204
VpaK11BI	GGWCC	4 cut(s)	802, 1028, 1272, 2350
XagI	CCTNNNNNAGG	1 cut(s)	1628
XapI	RAATTY	5 cut(s)	149, 941, 1033, 1091, 2123
XmiI	GTMKAC	1 cut(s)	981
XspI	CTAG	8 cut(s)	282, 818, 965, 1257, 1356, 1362, 1965, 2312

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.