Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0012623

Physical Location & Seq

Genomic Coordinates Reverse (-)

990239 .. 993047

Gene Structure 2809 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG012900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2493 bp

ATGGCAATGGCAATGGCAAAGGCAAAGGCAGCGCGGAATGACGCAAACAGAAGCCTTGAGAGTTTATTGGACATGGACAAAATAGTGGCTGCAAAGATTTCTGTTCCACTTCAGTTGTCGAAGATGATTCCGGGCCAAGGCCTTGAATTCAACAACCTTTCCTACAGTGTAATTAAGAAGATAAAGAAAGATGGGGTTTGGACCAAGAAGGAAGCTTATCTTCTTAATGACATATCTGGTCAGGCCGTGAAAGGTGAGGTTATGGCCATTTTGGGACCTAGTGGTGCTGGAAAATCCACATTTCTCGATGCCTTGGCAGGAAGGATTGCTCAAGGAAGTCTTGAAGGCTCTGTAAGAGTCGATGGAAAAACGGTTACTACAAGCTACATGAAGATGGTTTCCTCTTACGTGATGCAAGATGACCAGCTGTTCCCGATGTTAACTGTGTTTGAGACTTTCATGTTTGCAGCTGAGGTTAGGCTTCCTCCTTCTCTTTCCAAGCATGAGAAGAGAAAGAGAGTCTATGAGCTCATTGACCAGCTCGGCTTGCAAACTGCAACACATACATATATTGGTGATGAGGGGAGGAGAGGAGTCTCGGGAGGAGAAAGACGGAGGGTCTCAATTGGAATTGACATCATCCACAAACCTTCTTTGCTGTTTCTTGATGAACCAACTTCTGGTCTTGACTCTACGAGTGCTTATAGTGTTGTGGAAAAGGTGAAGGAAATAGCTCGAGGTGGTAGCATTGTGCTCATGACCATCCATCAACCTTCGTATCGTATTCAAAATCTCTTGGACCGCATGACAATCCTAGCAAGAGGAAAGCTGATATATTTGGGAAGTCCACATGGTCTGTCTGCCCACCTTTCTGGATTTGGAAGGCCAGTTCCTGATAGAGAAAACAACCTCGAGTATCTCTTGGATGTGATCAAAGAATATGATGAGTCTAATGTGGGACTGGAACCACTTGTTGTCTACCTCCGTGATGGAATCAAACCCGATCAGGTGTCAAGTACCCCTACTCCAAAAAAACTAAAGACACCACGAAGTTCTTATAAAAACACCCCTTCGTCCAAGCACATCAGCCTCAGGAGCAAACAATTTTCCCGTAGAAACTCGACACCTGGACCAGATTCTCGCCCGTCTGATGATTATGATGATGAGGAGGACGATGAGTTTGAGGAGGATGATGAGTTTGACAACTCCCTGGAAAGGAAATCAATTCATACACCAATGCAGCACTTTGCAAGTGGTATCTATAACCCTCGTCTAGCTTCACATTTCTACAAAGACTTCTCAGTGTGGATATACCATGGTGTCAAAGGAACTCCTCGCCGCCCACCATCATGGACTCCTGCTAGAACTCCGGGAAGGACCCCCGGAAAGACACCAGTAATCTCAGTGTCAGGAATAAGAAGTGCTGTTTCAAGCCAATATGCAACACCTCGGCACTACCCTCCTATGCCTAGTAGTACTAAAGCCCCTGTTGTCTACAGCCCTTCCAACTATGACTCTTCATATGGACCATCATTTGAAGAGTTCGAGATGGAAGAAGATGAGCTTGATGAGATAGAGCTTGGGCCTAAGTTTGCAAACCCCTGGCTTCGTGAGGTTGCAGTCCTCTCATGGCGTACAACACTCAATGTGGTTCGTACCCCTGAACTCTTCCTCTCACGAGAGATTGTGTTGGCTGTCATGGCACTCGTTCTATCTTCCCTTTTCAGTAACCTACATGCAGAGTCCTTCAAAAATGTAAACAGGCTTCTAAACTTCTACATCTTTGCTGTTTGCCTGATTTTCTTTTCCTCCAATGATGCTGTCCCGACTTTCATCCAAGAAAGGTTCATTTTCATCAGGGAAACTTCTCATAATGCTTACCGTGCTTCTTCCTACGTCATCTCTTCCCTCATTGTTTACCTCCCGTTTTTCGCCATTCAAGCTCTCACATTTGCTGCCATAACCAAACTCATGCTTAAGCTCAGAAGCAGTCTTTTCTATTTTTGGATAATCTTGTATGCCTCACTTATAACCACCAATGCTTATGTCATGCTTGTGAGTGCCCTGGTTCCTAGTTACATCACTGGATATGCTGTTGTGATAGCCACCACAGCTCTCTTCTTTCTCACTTGCGGCTTTTTCTTGAAACGTACTCAGATCCCAAATTACTGGGTTTGGGTGCACTACATCTCCGCAATTAAGTACCCATTTGAGGCAATGCTAACAAATGAATTCCAAGGAATACGTTGCTACTCTGGCAATCTAGCCGATCTTTCACCTGGGCCTTTAGGAAATGTGAAGTTGAGTAAAGTGCACAAAGACACAGAATCGCTAAGAGGTTGCCTGCTGATCGGACAAGATGTTATAGAGTCGATGGATATCAATCACGATAACATCTGGTATAATGTTGGAATCTTGCTAGCTTGGGGTGTTCTATACCGGCTCCTCTTCTACATGGTCCTCAGATTCTATTCCAAGAATGAGAGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005775 GO:0005886 GO:0006810 GO:0007034 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009987 GO:0010208 GO:0010927 GO:0015399 GO:0015405 GO:0015893 GO:0016020 GO:0016021 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0022804 GO:0022857 GO:0030198 GO:0031224 GO:0031974 GO:0032501 GO:0032502 GO:0032989 GO:0042221 GO:0042493 GO:0042623 GO:0042626 GO:0042891 GO:0043062 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043492 GO:0044085 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045229 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0070013 GO:0071840 GO:0071944 GO:0085029

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

830

Amino Acids

93.41

Weight (kDa)

8.83

Isoelectric Point (pI)

42.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	75 - 227	1.1e-28	ABC transporter
ABC2_membrane_7	PF19055	256 - 312	5.2e-06	ABC-2 type transporter
ABC2_membrane	PF01061	538 - 745	1.5e-38	ABC-2 type transporter
ABC2_membrane_3	PF12698	580 - 817	7.7e-07	ABC-2 family transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0012623)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g17530
malus_domestica	MD06G1228700.v1.1 MD14G1237900.v1.1
prunus_persica	Prupe.5G235100_v2.0.a1
pyrus_communis	pycom06g20500 pycom14g19900
rosa_chinensis	RchiOBHm_Chr3g0493261 RchiOBHm_Chr7g0178121
rosa_laevigata	RLG00000005469
rosa_multiflora	Rmu_sc0000425.1_g000011 Rmu_sc0005324.1_g000001
rosa_roxburghii	Rroxscaffold_6G00391680
rosa_rugosa	Rorug03G0260000 Rorug06G0413700
rosa_samantha	Rh3DG344200 Rh7CG012900 Rh7DG013200
rosa_wichuraiana	Rw3G027160 Rw7G001030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1059, 2030
AccB7I	CCANNNNNTGG	1 cut(s)	680
AccI	GTMKAC	2 cut(s)	978, 1494
AccII	CGCG	1 cut(s)	34
AciI	CCGC	5 cut(s)	34, 802, 1339, 2133, 2193
AclWI	GGATC	1 cut(s)	2152
AcoI	YGGCCR	1 cut(s)	264
AcsI	RAATTY	2 cut(s)	146, 2231
AcuI	CTGAAG	1 cut(s)	95
AfaI	GTAC	6 cut(s)	1018, 1477, 1636, 1657, 2152, 2204
AfiI	CCNNNNNNNGG	4 cut(s)	137, 680, 1215, 2212
AflII	CTTAAG	1 cut(s)	1976
AgsI	TTSAA	9 cut(s)	146, 151, 344, 788, 1431, 1538, 1750, 1940, 2146
AhdI	GACNNNNNGTC	1 cut(s)	617
AjnI	CCWGG	5 cut(s)	1126, 1209, 1601, 2064, 2278
AloI	GAACNNNNNNTCC	2 cut(s)	873, 905
Alw21I	GWGCWC	4 cut(s)	531, 756, 2184, 2316
Alw26I	GTCTC	3 cut(s)	446, 601, 625
Alw44I	GTGCAC	2 cut(s)	2180, 2312
AlwI	GGATC	1 cut(s)	2152
AlwNI	CAGNNNCTG	1 cut(s)	893
Ama87I	CYCGRG	3 cut(s)	598, 735, 911
AoxI	GGCC	7 cut(s)	133, 139, 243, 264, 884, 1583, 2282
ApaLI	GTGCAC	2 cut(s)	2180, 2312
ApeKI	GCWGC	5 cut(s)	29, 89, 467, 1240, 1955
ApoI	RAATTY	2 cut(s)	146, 2231
ArsI	GACNNNNNNTTYG	2 cut(s)	1163, 1195
AspLEI	GCGC	1 cut(s)	34
AsuC2I	CCSGG	3 cut(s)	132, 1371, 1383
AsuHPI	GGTGA	4 cut(s)	266, 587, 733, 2268
AsuNHI	GCTAGC	1 cut(s)	2419
AvaI	CYCGRG	3 cut(s)	598, 735, 911
AvaII	GGWCC	7 cut(s)	201, 275, 799, 1130, 1377, 1526, 2458
AxyI	CCTNAGG	1 cut(s)	1091
BaeGI	GKGCMC	3 cut(s)	2065, 2184, 2316
BaeI	ACNNNNGTAYC	2 cut(s)	761, 794
BalI	TGGCCA	1 cut(s)	266
BanII	GRGCYC	1 cut(s)	531
BarI	GAAGNNNNNNTAC	2 cut(s)	1749, 1781
BauI	CACGAG	1 cut(s)	1677
Bbv12I	GWGCWC	4 cut(s)	531, 756, 2184, 2316
BbvCI	CCTCAGC	1 cut(s)	471
BbvI	GCAGC	5 cut(s)	41, 76, 479, 1252, 1942
BceAI	ACGGC	1 cut(s)	230
BciT130I	CCWGG	5 cut(s)	1128, 1211, 1603, 2066, 2280
BclI	TGATCA	1 cut(s)	930
BcnI	CCSGG	3 cut(s)	132, 1371, 1383
BcoDI	GTCTC	3 cut(s)	446, 601, 625
BfaI	CTAG	8 cut(s)	279, 815, 1274, 1362, 1470, 2073, 2264, 2420
BfmI	CTRYAG	2 cut(s)	163, 1495
BfrI	CTTAAG	1 cut(s)	1976
BisI	GCNGC	7 cut(s)	30, 90, 468, 1241, 1339, 1956, 2134
BlsI	GCNGC	7 cut(s)	31, 91, 469, 1242, 1340, 1957, 2135
BmcAI	AGTACT	1 cut(s)	1477
Bme1390I	CCNGG	8 cut(s)	132, 1128, 1211, 1371, 1383, 1603, 2066, 2280
Bme18I	GGWCC	7 cut(s)	201, 275, 799, 1130, 1377, 1526, 2458
BmeRI	GACNNNNNGTC	1 cut(s)	617
BmeT110I	CYCGRG	3 cut(s)	598, 735, 911
BmiI	GGNNCC	5 cut(s)	276, 966, 1379, 2070, 2444
BmrFI	CCNGG	8 cut(s)	132, 1128, 1211, 1371, 1383, 1603, 2066, 2280
BmrI	ACTGGG	1 cut(s)	2179
BmsI	GCATC	3 cut(s)	298, 402, 1807
BmtI	GCTAGC	1 cut(s)	2423
BmuI	ACTGGG	1 cut(s)	2179
Bpu10I	CCTNAGC	1 cut(s)	471
BpuEI	CTTGAG	2 cut(s)	77, 315
BpuMI	CCSGG	3 cut(s)	132, 1371, 1383
BsaAI	YACGTR	1 cut(s)	409
BsaBI	GATNNNNATC	2 cut(s)	2378, 2382
BsaI	GGTCTC	1 cut(s)	625
BsaXI	ACNNNNNCTCC	4 cut(s)	1009, 1039, 2174, 2204
Bsc4I	CCNNNNNNNGG	4 cut(s)	137, 680, 1215, 2212
Bse118I	RCCGGY	1 cut(s)	2439
Bse1I	ACTGG	5 cut(s)	887, 966, 1394, 2089, 2174
Bse21I	CCTNAGG	1 cut(s)	1091
Bse3DI	GCAATG	3 cut(s)	12, 18, 2223
Bse8I	GATNNNNATC	2 cut(s)	2378, 2382
BseBI	CCWGG	5 cut(s)	1128, 1211, 1603, 2066, 2280
BseGI	GGATG	5 cut(s)	639, 762, 931, 1195, 1833
BseJI	GATNNNNATC	2 cut(s)	2378, 2382
BseLI	CCNNNNNNNGG	4 cut(s)	137, 680, 1215, 2212
BseMI	GCAATG	3 cut(s)	12, 18, 2223
BseMII	CTCAG	7 cut(s)	462, 1105, 1314, 1416, 1996, 2168, 2476
BseNI	ACTGG	5 cut(s)	887, 966, 1394, 2089, 2174
BseRI	GAGGAG	7 cut(s)	601, 606, 618, 1181, 1199, 1323, 2435
BseSI	GKGCMC	3 cut(s)	2065, 2184, 2316
BseXI	GCAGC	5 cut(s)	41, 76, 479, 1252, 1942
Bsh1236I	CGCG	1 cut(s)	34
BshFI	GGCC	7 cut(s)	135, 141, 245, 266, 886, 1585, 2284
BsiHKAI	GWGCWC	4 cut(s)	531, 756, 2184, 2316
BsiHKCI	CYCGRG	3 cut(s)	598, 735, 911
BsiSI	CCGG	4 cut(s)	131, 1370, 1383, 2440
BslFI	GGGAC	3 cut(s)	288, 972, 1808
BslI	CCNNNNNNNGG	4 cut(s)	137, 680, 1215, 2212
BsmAI	GTCTC	3 cut(s)	446, 601, 625
BsmFI	GGGAC	3 cut(s)	288, 972, 1808
BsnI	GGCC	7 cut(s)	135, 141, 245, 266, 886, 1585, 2284
Bso31I	GGTCTC	1 cut(s)	625
BsoBI	CYCGRG	3 cut(s)	598, 735, 911
Bsp1286I	GDGCHC	5 cut(s)	531, 756, 2065, 2184, 2316
Bsp143I	GATC	5 cut(s)	930, 1003, 2157, 2269, 2349
Bsp19I	CCATGG	1 cut(s)	1315
BspACI	CCGC	5 cut(s)	34, 802, 1339, 2133, 2193
BspANI	GGCC	7 cut(s)	135, 141, 245, 266, 886, 1585, 2284
BspCNI	CTCAG	7 cut(s)	463, 1104, 1313, 1415, 1995, 2167, 2475
BspFNI	CGCG	1 cut(s)	34
BspHI	TCATGA	1 cut(s)	756
BspLI	GGNNCC	5 cut(s)	276, 966, 1379, 2070, 2444
BspOI	GCTAGC	1 cut(s)	2423
BspPI	GGATC	1 cut(s)	2152
BspTI	CTTAAG	1 cut(s)	1976
BspTNI	GGTCTC	1 cut(s)	625
BsrDI	GCAATG	3 cut(s)	12, 18, 2223
BsrFI	RCCGGY	1 cut(s)	2439
BsrI	ACTGG	5 cut(s)	887, 966, 1394, 2089, 2174
BssAI	RCCGGY	1 cut(s)	2439
BssMI	GATC	5 cut(s)	930, 1003, 2157, 2269, 2349
BssSI	CACGAG	1 cut(s)	1677
BssT1I	CCWWGG	4 cut(s)	136, 312, 1315, 2236
Bst2BI	CACGAG	1 cut(s)	1677
Bst2UI	CCWGG	5 cut(s)	1128, 1211, 1603, 2066, 2280
Bst4CI	ACNGT	4 cut(s)	167, 373, 445, 1883
Bst6I	CTCTTC	7 cut(s)	503, 1522, 1533, 1673, 1909, 2123, 2453
BstAFI	CTTAAG	1 cut(s)	1976
BstBAI	YACGTR	1 cut(s)	409
BstC8I	GCNNGC	3 cut(s)	548, 2345, 2421
BstDEI	CTNAG	9 cut(s)	471, 1091, 1300, 1402, 1587, 1982, 2154, 2333, 2462
BstDSI	CCRYGG	1 cut(s)	1315
BstF5I	GGATG	5 cut(s)	639, 762, 931, 1195, 1833
BstFNI	CGCG	1 cut(s)	34
BstHHI	GCGC	1 cut(s)	34
BstKTI	GATC	5 cut(s)	933, 1006, 2160, 2272, 2352
BstMAI	GTCTC	3 cut(s)	446, 601, 625
BstMBI	GATC	5 cut(s)	930, 1003, 2157, 2269, 2349
BstMWI	GCNNNNNNNGC	8 cut(s)	29, 547, 1095, 1700, 1883, 1940, 2111, 2256
BstNI	CCWGG	5 cut(s)	1128, 1211, 1603, 2066, 2280
BstNSI	RCATGY	1 cut(s)	1739
BstSCI	CCNGG	8 cut(s)	130, 1126, 1209, 1369, 1381, 1601, 2064, 2278
BstSFI	CTRYAG	2 cut(s)	163, 1495
BstSLI	GKGCMC	3 cut(s)	2065, 2184, 2316
BstUI	CGCG	1 cut(s)	34
BstV1I	GCAGC	5 cut(s)	41, 76, 479, 1252, 1942
BstX2I	RGATCY	1 cut(s)	2157
BstXI	CCANNNNNNTGG	3 cut(s)	872, 1350, 2169
BstYI	RGATCY	1 cut(s)	2157
Bsu36I	CCTNAGG	1 cut(s)	1091
BsuRI	GGCC	7 cut(s)	135, 141, 245, 266, 886, 1585, 2284
BtgI	CCRYGG	1 cut(s)	1315
BtsCI	GGATG	5 cut(s)	639, 762, 931, 1195, 1833
BtsIMutI	CAGTG	4 cut(s)	172, 1308, 1410, 2082
Cac8I	GCNNGC	3 cut(s)	548, 2345, 2421
CaiI	CAGNNNCTG	1 cut(s)	893
CciI	TCATGA	1 cut(s)	756
CfoI	GCGC	1 cut(s)	34
Cfr10I	RCCGGY	1 cut(s)	2439
CseI	GACGC	1 cut(s)	50
Csp6I	GTAC	6 cut(s)	1017, 1476, 1635, 1656, 2151, 2203
CspCI	CAANNNNNGTGG	2 cut(s)	96, 131
CviQI	GTAC	6 cut(s)	1017, 1476, 1635, 1656, 2151, 2203
DdeI	CTNAG	9 cut(s)	471, 1091, 1300, 1402, 1587, 1982, 2154, 2333, 2462
DpnI	GATC	5 cut(s)	932, 1005, 2159, 2271, 2351
DpnII	GATC	5 cut(s)	930, 1003, 2157, 2269, 2349
DriI	GACNNNNNGTC	1 cut(s)	617
EaeI	YGGCCR	1 cut(s)	264
Eam1104I	CTCTTC	7 cut(s)	503, 1522, 1533, 1673, 1909, 2123, 2453
Eam1105I	GACNNNNNGTC	1 cut(s)	617
EarI	CTCTTC	7 cut(s)	503, 1522, 1533, 1673, 1909, 2123, 2453
Ecl136II	GAGCTC	1 cut(s)	529
Eco130I	CCWWGG	4 cut(s)	136, 312, 1315, 2236
Eco147I	AGGCCT	1 cut(s)	141
Eco24I	GRGCYC	1 cut(s)	531
Eco31I	GGTCTC	1 cut(s)	625
Eco32I	GATATC	1 cut(s)	2380
Eco47I	GGWCC	7 cut(s)	201, 275, 799, 1130, 1377, 1526, 2458
Eco53kI	GAGCTC	1 cut(s)	529
Eco57I	CTGAAG	1 cut(s)	95
Eco81I	CCTNAGG	1 cut(s)	1091
Eco88I	CYCGRG	3 cut(s)	598, 735, 911
EcoICRI	GAGCTC	1 cut(s)	529
EcoO109I	RGGNCCY	2 cut(s)	275, 1377
EcoRI	GAATTC	2 cut(s)	146, 2231
EcoRII	CCWGG	5 cut(s)	1126, 1209, 1601, 2064, 2278
EcoRV	GATATC	1 cut(s)	2380
EcoT14I	CCWWGG	4 cut(s)	136, 312, 1315, 2236
EcoT38I	GRGCYC	1 cut(s)	531
ErhI	CCWWGG	4 cut(s)	136, 312, 1315, 2236
FalI	AAGNNNNNCTT	6 cut(s)	204, 236, 324, 356, 1548, 1580
FaqI	GGGAC	3 cut(s)	288, 972, 1808
FauNDI	CATATG	1 cut(s)	1522
FbaI	TGATCA	1 cut(s)	930
FblI	GTMKAC	2 cut(s)	978, 1494
Fnu4HI	GCNGC	7 cut(s)	30, 90, 468, 1241, 1339, 1956, 2134
FokI	GGATG	5 cut(s)	626, 749, 938, 1202, 1820
FriOI	GRGCYC	1 cut(s)	531
Fsp4HI	GCNGC	7 cut(s)	30, 90, 468, 1241, 1339, 1956, 2134
FspBI	CTAG	8 cut(s)	279, 815, 1274, 1362, 1470, 2073, 2264, 2420
GlaI	GCGC	1 cut(s)	33
GluI	GCNGC	7 cut(s)	30, 90, 468, 1241, 1339, 1956, 2134
HaeIII	GGCC	7 cut(s)	135, 141, 245, 266, 886, 1585, 2284
HapII	CCGG	4 cut(s)	131, 1370, 1383, 2440
HgaI	GACGC	1 cut(s)	50
HhaI	GCGC	1 cut(s)	34
Hin6I	GCGC	1 cut(s)	32
HinP1I	GCGC	1 cut(s)	32
HincII	GTYRAC	1 cut(s)	441
HindII	GTYRAC	1 cut(s)	441
HindIII	AAGCTT	1 cut(s)	213
HpaI	GTTAAC	1 cut(s)	441
HpaII	CCGG	4 cut(s)	131, 1370, 1383, 2440
HphI	GGTGA	4 cut(s)	266, 587, 733, 2268
Hpy166II	GTNNAC	8 cut(s)	441, 848, 979, 1495, 1759, 1918, 2182, 2314
Hpy188I	TCNGA	5 cut(s)	1150, 1985, 2157, 2354, 2465
Hpy8I	GTNNAC	8 cut(s)	441, 848, 979, 1495, 1759, 1918, 2182, 2314
HpyCH4III	ACNGT	4 cut(s)	167, 373, 445, 1883
HpyCH4IV	ACGT	4 cut(s)	408, 1896, 2149, 2245
HpyF10VI	GCNNNNNNNGC	8 cut(s)	29, 547, 1095, 1700, 1883, 1940, 2111, 2256
HpyF3I	CTNAG	9 cut(s)	471, 1091, 1300, 1402, 1587, 1982, 2154, 2333, 2462
HpySE526I	ACGT	4 cut(s)	408, 1896, 2149, 2245
HspAI	GCGC	1 cut(s)	32
Ksp22I	TGATCA	1 cut(s)	930
KspAI	GTTAAC	1 cut(s)	441
Kzo9I	GATC	5 cut(s)	930, 1003, 2157, 2269, 2349
LmnI	GCTCC	2 cut(s)	1095, 2448
Lsp1109I	GCAGC	5 cut(s)	41, 76, 479, 1252, 1942
LweI	GCATC	3 cut(s)	298, 402, 1807
MaeI	CTAG	8 cut(s)	279, 815, 1274, 1362, 1470, 2073, 2264, 2420
MaeII	ACGT	4 cut(s)	408, 1896, 2149, 2245
MaeIII	GTNAC	3 cut(s)	373, 1727, 2075
MalI	GATC	5 cut(s)	932, 1005, 2159, 2271, 2351
MboI	GATC	5 cut(s)	930, 1003, 2157, 2269, 2349
MfeI	CAATTG	1 cut(s)	624
MflI	RGATCY	1 cut(s)	2157
MhlI	GDGCHC	5 cut(s)	531, 756, 2065, 2184, 2316
MlsI	TGGCCA	1 cut(s)	266
MluCI	AATT	9 cut(s)	146, 171, 624, 630, 1103, 1224, 2164, 2196, 2231
MluNI	TGGCCA	1 cut(s)	266
MlyI	GAGTC	9 cut(s)	366, 528, 603, 683, 956, 1348, 1508, 1751, 2378
MmeI	TCCRAC	2 cut(s)	1530, 2389
Mox20I	TGGCCA	1 cut(s)	266
MscI	TGGCCA	1 cut(s)	266
MseI	TTAA	5 cut(s)	174, 225, 440, 1977, 2199
MslI	CAYNNNNRTG	3 cut(s)	392, 1348, 2054
Msp20I	TGGCCA	1 cut(s)	266
MspA1I	CMGCKG	2 cut(s)	427, 470
MspCI	CTTAAG	1 cut(s)	1976
MspI	CCGG	4 cut(s)	131, 1370, 1383, 2440
MspR9I	CCNGG	8 cut(s)	132, 1128, 1211, 1371, 1383, 1603, 2066, 2280
MunI	CAATTG	1 cut(s)	624
MvaI	CCWGG	5 cut(s)	1128, 1211, 1603, 2066, 2280
MvnI	CGCG	1 cut(s)	34
MwoI	GCNNNNNNNGC	8 cut(s)	29, 547, 1095, 1700, 1883, 1940, 2111, 2256
NciI	CCSGG	3 cut(s)	132, 1371, 1383
NcoI	CCATGG	1 cut(s)	1315
NdeI	CATATG	1 cut(s)	1522
NdeII	GATC	5 cut(s)	930, 1003, 2157, 2269, 2349
NheI	GCTAGC	1 cut(s)	2419
NlaIV	GGNNCC	5 cut(s)	276, 966, 1379, 2070, 2444
NmeAIII	GCCGAG	2 cut(s)	522, 1429
NspI	RCATGY	1 cut(s)	1739
PaeR7I	CTCGAG	2 cut(s)	735, 911
PagI	TCATGA	1 cut(s)	756
PceI	AGGCCT	1 cut(s)	141
PfeI	GAWTC	6 cut(s)	127, 993, 1136, 2327, 2412, 2466
PflMI	CCANNNNNTGG	1 cut(s)	680
PfoI	TCCNGGA	1 cut(s)	1369
PkrI	GCNGC	7 cut(s)	31, 91, 469, 1242, 1340, 1957, 2135
PleI	GAGTC	9 cut(s)	365, 527, 602, 683, 955, 1348, 1508, 1750, 2377
PpsI	GAGTC	9 cut(s)	365, 527, 602, 683, 955, 1348, 1508, 1750, 2377
Ppu21I	YACGTR	1 cut(s)	409
PpuMI	RGGWCCY	2 cut(s)	275, 1377
PsiI	TTATAA	2 cut(s)	1059, 2030
Psp124BI	GAGCTC	1 cut(s)	531
Psp5II	RGGWCCY	2 cut(s)	275, 1377
Psp6I	CCWGG	5 cut(s)	1126, 1209, 1601, 2064, 2278
PspGI	CCWGG	5 cut(s)	1126, 1209, 1601, 2064, 2278
PspN4I	GGNNCC	5 cut(s)	276, 966, 1379, 2070, 2444
PspPPI	RGGWCCY	2 cut(s)	275, 1377
PspXI	VCTCGAGB	2 cut(s)	735, 911
PstNI	CAGNNNCTG	1 cut(s)	893
PsuI	RGATCY	1 cut(s)	2157
PvuII	CAGCTG	2 cut(s)	427, 470
RsaI	GTAC	6 cut(s)	1018, 1477, 1636, 1657, 2152, 2204
RsaNI	GTAC	6 cut(s)	1017, 1476, 1635, 1656, 2151, 2203
RseI	CAYNNNNRTG	3 cut(s)	392, 1348, 2054
SacI	GAGCTC	1 cut(s)	531
SaqAI	TTAA	5 cut(s)	174, 225, 440, 1977, 2199
SatI	GCNGC	7 cut(s)	30, 90, 468, 1241, 1339, 1956, 2134
Sau3AI	GATC	5 cut(s)	930, 1003, 2157, 2269, 2349
ScaI	AGTACT	1 cut(s)	1477
SchI	GAGTC	9 cut(s)	366, 528, 603, 683, 956, 1348, 1508, 1751, 2378
ScrFI	CCNGG	8 cut(s)	132, 1128, 1211, 1371, 1383, 1603, 2066, 2280
SduI	GDGCHC	5 cut(s)	531, 756, 2065, 2184, 2316
SfaNI	GCATC	3 cut(s)	298, 402, 1807
SfcI	CTRYAG	2 cut(s)	163, 1495
Sfr274I	CTCGAG	2 cut(s)	735, 911
SinI	GGWCC	7 cut(s)	201, 275, 799, 1130, 1377, 1526, 2458
SlaI	CTCGAG	2 cut(s)	735, 911
SmiMI	CAYNNNNRTG	3 cut(s)	392, 1348, 2054
SmlI	CTYRAG	5 cut(s)	56, 330, 735, 911, 1976
SmoI	CTYRAG	5 cut(s)	56, 330, 735, 911, 1976
Sse9I	AATT	9 cut(s)	146, 171, 624, 630, 1103, 1224, 2164, 2196, 2231
SseBI	AGGCCT	1 cut(s)	141
SsiI	CCGC	5 cut(s)	34, 802, 1339, 2133, 2193
SspMI	CTAG	8 cut(s)	279, 815, 1274, 1362, 1470, 2073, 2264, 2420
SstI	GAGCTC	1 cut(s)	531
StuI	AGGCCT	1 cut(s)	141
StyD4I	CCNGG	8 cut(s)	130, 1126, 1209, 1369, 1381, 1601, 2064, 2278
StyI	CCWWGG	4 cut(s)	136, 312, 1315, 2236
TaaI	ACNGT	4 cut(s)	167, 373, 445, 1883
TaiI	ACGT	4 cut(s)	411, 1899, 2152, 2248
TaqI	TCGA	8 cut(s)	119, 306, 360, 736, 912, 1121, 1545, 2372
TasI	AATT	9 cut(s)	146, 171, 624, 630, 1103, 1224, 2164, 2196, 2231
TatI	WGTACW	1 cut(s)	1475
TauI	GCSGC	2 cut(s)	1341, 2136
TfiI	GAWTC	6 cut(s)	127, 993, 1136, 2327, 2412, 2466
Tru1I	TTAA	5 cut(s)	174, 225, 440, 1977, 2199
Tru9I	TTAA	5 cut(s)	174, 225, 440, 1977, 2199
TscAI	CASTG	4 cut(s)	172, 1308, 1410, 2089
TseI	GCWGC	5 cut(s)	29, 89, 467, 1240, 1955
TspDTI	ATGAA	9 cut(s)	404, 448, 684, 1217, 1509, 1822, 1837, 1843, 2244
TspGWI	ACGGA	2 cut(s)	628, 974
TspRI	CASTG	4 cut(s)	172, 1308, 1410, 2089
Van91I	CCANNNNNTGG	1 cut(s)	680
Vha464I	CTTAAG	1 cut(s)	1976
VneI	GTGCAC	2 cut(s)	2180, 2312
VpaK11BI	GGWCC	7 cut(s)	201, 275, 799, 1130, 1377, 1526, 2458
XapI	RAATTY	2 cut(s)	146, 2231
XceI	RCATGY	1 cut(s)	1739
XhoI	CTCGAG	2 cut(s)	735, 911
XmiI	GTMKAC	2 cut(s)	978, 1494
XspI	CTAG	8 cut(s)	279, 815, 1274, 1362, 1470, 2073, 2264, 2420
ZrmI	AGTACT	1 cut(s)	1477

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.