Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0012623

Physical Location & Seq

Genomic Coordinates Reverse (-)

865621 .. 868423

Gene Structure 2803 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G001030.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2487 bp

ATGGCAAAGGCAAAGGCAAAGGCAGCGCGGAATGACGCAAACAGAAGCCTTGAGAGTTTATTGGACATGGACAAAATAGTGGCTGCAAAGATTTCTGTTCCACTTCAGTTGTCGAAGATGATTCCGGGCCAAGGCCTTGAATTCAACAACCTTTCCTACAGTGTAATTAAGAAGATAAAGAAAGATGGGGTTTGGATCAAGAAGGAAGCTTATCTTCTTAATGACATATCTGGTCAGGCCGTGAAAGGTGAGGTTATGGCCATTTTGGGACCTAGTGGTGCTGGAAAATCCACATTTCTCGATGCCTTGGCAGGAAGGATTGCTCAAGGAAGTCTTGAAGGCTCTGTAAGAGTCGATGGAAAAACGGTTACTACAAGCTACATGAAGATGGTTTCCTCTTACGTGATGCAAGATGACCAGCTGTTCCCGATGTTAACTGTGTTTGAGACTTTCATGTTTGCAGCTGAGGTTAGGCTTCCTCCTTCTCTTTCCAAGCATGAGAAGAGAAAGAGAGTCTATGAGCTCATTGACCAGCTCGGCTTGCAAACTGCAACACATACATATATTGGTGATGAGGGGAGGAGAGGAGTCTCGGGAGGAGAAAGACGGAGGGTCTCAATTGGAATTGACATCATCCACAAACCTTCTTTGCTGTTTCTTGATGAACCAACTTCTGGTCTTGACTCTACGAGTGCTTATAGTGTTGTGGAAAAGGTGAAGGAAATAGCTCGTGGTGGTAGCATTGTGCTCATGACCATCCATCAACCTTCGTATCGTATTCAAAATCTCTTGGACCGCATGACAATCCTAGCAAGAGGAAAGCTGATATATTTGGGAAGTCCACATGGTCTGTCTGCCCACCTTTCTGGATTTGGAAGGCCAGTTCCTGATGGAGAAAACAACCTCGAGTATCTCTTGGATGTGATCAAAGAATATGATGAGTCTAATGTGGGATTAGAACCACTTGTTGTCTACCTCCGTGATGGAATCAAACCCGATCAGGTGTCAAGTACCCCTACTCCAAAAAGACTAAAGACACCACGAAGTTCTTATAAAAACACCCCTTCGTCCAAGCACATCAGCCACAGGAGCAAACAATTTTCCCGTAGAAACTCGACACCTGGACCAGATTCTCGCCCGTCTGATGATTATGATGATGAGGAGGACGATGAGTTTGAGGAGGATGATGAGTTTGACAACTCCCTGGAAAGGAAATCAATTCATACACCAATGCAGCACTTTGCAAGTGGTATCTATAACCCTCGTCTAGCTTCACATTTCTACAAAGACTTCTCAGTGTGGATATACCATGGTGTCAAAGGAACTCCTCGCCGCCCACCATCATGGACTCCTGCTAGAACTCCGGGAAGGACCCCCGGAAAGACACCAGTAATCTCAGTGTCAGGAATAAGAAGTGCTGTTTCAAGCCAATATGCAACACCTCGGCACTACCCTCCTATGCCTAGTAGTACTAAAGCCCCTGTTGTCTACAGCTCTTCCAACTATGACTCTTCATATGGACCATCATTTGAAGAGTTCGAGATGGAAGAAGATGAGCTTGATGAGATAGAGCTTGGGCCTAAGTTTGCAAACCCCTGGCTTCGTGAGGTTGCAGTCCTCTCATGGCGTACAACACTCAATGTGGTTCGTACCCCTGAACTCTTCCTCTCACGAGAGATTGTGTTGGCTGTCATGGCACTCGTTCTATCTTCCCTTTTCAGAAACCTACATGCAGAGTCCTTCAAAAATGTAAACAGACTTCTAAACTTCTACATCTTTGCTGTTTGCCTGATCTTCTTTTCCTCCAATGATGCTGTCCCGACTTTCATCCAAGAAAGGTTCATTTTCATCAGGGAAACTTCTCATAATGCTTACCGTGCTTCTTCCTATGTCATCTCTTCCCTCATTGTTTACCTCCCGTTTTTCGCCATTCAAGCTCTCACATTTGCTGCCATAACCAAACTCATGCTTGAGCTCAGAAGCAGTCTTTTCTATTTTTGGATAATCTTGTATGCCTCACTTATAACCACCAATGCTTATGTCATGCTTGTGAGTGCCCTGGTTCCTAGTTACATCACTGGATATGCTGTTGTGATAGCCACCACAGCTCTCTTCTTTCTCACTTGCGGCTTTTTCTTGAAACGTACTCAGATCCCAAATTACTGGGTTTGGGTGCACTACATCTCCGCAATTAAGTACCCATTTGAGGCAATGCTAACAAATGAATTCCAAGGAATACGTTGCTACTCTGGCAATCTAGCCGATCTTTCACCTGGGCCTTTAGGAAATGTGAAGTTGAGTAAAGTGCACAAAGACACAGAATCGCTAAGAGGTTGCCTGCTGATCGGACAAGATGTTATAGAGTCGATGGATATCAATCACGATAACATCTGGTATGATGTTGGAATCTTGCTAGCTTGGGGTGTTCTATACCGGCTCCTCTTCTACATGGTCCTCAGATTCTATTCCAAGAATGAGAGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005775 GO:0005886 GO:0006810 GO:0007034 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009987 GO:0010208 GO:0010927 GO:0015399 GO:0015405 GO:0015893 GO:0016020 GO:0016021 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0022804 GO:0022857 GO:0030198 GO:0031224 GO:0031974 GO:0032501 GO:0032502 GO:0032989 GO:0042221 GO:0042493 GO:0042623 GO:0042626 GO:0042891 GO:0043062 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043492 GO:0044085 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045229 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0070013 GO:0071840 GO:0071944 GO:0085029

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

828

Amino Acids

93.23

Weight (kDa)

8.67

Isoelectric Point (pI)

42.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	73 - 225	1.1e-28	ABC transporter
ABC2_membrane	PF01061	536 - 743	2.7e-38	ABC-2 type transporter
ABC2_membrane_3	PF12698	578 - 815	2.1e-08	ABC-2 family transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012623)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g17530
malus_domestica	MD06G1228700.v1.1 MD14G1237900.v1.1
prunus_persica	Prupe.5G235100_v2.0.a1
pyrus_communis	pycom06g20500 pycom14g19900
rosa_chinensis	RchiOBHm_Chr3g0493261 RchiOBHm_Chr7g0178121
rosa_laevigata	RLG00000005469
rosa_multiflora	Rmu_sc0000425.1_g000011 Rmu_sc0005324.1_g000001
rosa_roxburghii	Rroxscaffold_6G00391680
rosa_rugosa	Rorug03G0260000 Rorug06G0413700
rosa_samantha	Rh3DG344200 Rh7CG012900 Rh7DG013200
rosa_wichuraiana	Rw3G027160 Rw7G001030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1053, 2024
AccB7I	CCANNNNNTGG	1 cut(s)	674
AccI	GTMKAC	2 cut(s)	972, 1488
AccII	CGCG	1 cut(s)	28
AciI	CCGC	5 cut(s)	28, 796, 1333, 2127, 2187
AclWI	GGATC	2 cut(s)	203, 2146
AcoI	YGGCCR	1 cut(s)	258
AcsI	RAATTY	2 cut(s)	140, 2225
AcuI	CTGAAG	1 cut(s)	89
AfaI	GTAC	6 cut(s)	1012, 1471, 1630, 1651, 2146, 2198
AfiI	CCNNNNNNNGG	4 cut(s)	131, 674, 1209, 2206
AgsI	TTSAA	9 cut(s)	140, 145, 338, 782, 1425, 1532, 1744, 1934, 2140
AhdI	GACNNNNNGTC	1 cut(s)	611
AjnI	CCWGG	5 cut(s)	1120, 1203, 1595, 2058, 2272
AloI	GAACNNNNNNTCC	2 cut(s)	867, 899
Alw21I	GWGCWC	5 cut(s)	525, 750, 1977, 2178, 2310
Alw26I	GTCTC	3 cut(s)	440, 595, 619
Alw44I	GTGCAC	2 cut(s)	2174, 2306
AlwI	GGATC	2 cut(s)	203, 2146
AlwNI	CAGNNNCTG	1 cut(s)	887
Ama87I	CYCGRG	2 cut(s)	592, 905
AoxI	GGCC	7 cut(s)	127, 133, 237, 258, 878, 1577, 2276
ApaLI	GTGCAC	2 cut(s)	2174, 2306
ApeKI	GCWGC	5 cut(s)	23, 83, 461, 1234, 1949
ApoI	RAATTY	2 cut(s)	140, 2225
ArsI	GACNNNNNNTTYG	2 cut(s)	1157, 1189
AspLEI	GCGC	1 cut(s)	28
AspS9I	GGNCC	9 cut(s)	127, 269, 793, 1124, 1371, 1520, 1577, 2276, 2452
AsuC2I	CCSGG	3 cut(s)	126, 1365, 1377
AsuHPI	GGTGA	4 cut(s)	260, 581, 727, 2262
AsuNHI	GCTAGC	1 cut(s)	2413
AvaI	CYCGRG	2 cut(s)	592, 905
AvaII	GGWCC	6 cut(s)	269, 793, 1124, 1371, 1520, 2452
BaeGI	GKGCMC	3 cut(s)	2059, 2178, 2310
BaeI	ACNNNNGTAYC	2 cut(s)	755, 788
BalI	TGGCCA	1 cut(s)	260
BanII	GRGCYC	2 cut(s)	525, 1977
BarI	GAAGNNNNNNTAC	2 cut(s)	1743, 1775
BauI	CACGAG	2 cut(s)	729, 1671
Bbv12I	GWGCWC	5 cut(s)	525, 750, 1977, 2178, 2310
BbvCI	CCTCAGC	1 cut(s)	465
BbvI	GCAGC	5 cut(s)	35, 70, 473, 1246, 1936
BceAI	ACGGC	1 cut(s)	224
BciT130I	CCWGG	5 cut(s)	1122, 1205, 1597, 2060, 2274
BclI	TGATCA	1 cut(s)	924
BcnI	CCSGG	3 cut(s)	126, 1365, 1377
BcoDI	GTCTC	3 cut(s)	440, 595, 619
BfaI	CTAG	8 cut(s)	273, 809, 1268, 1356, 1464, 2067, 2258, 2414
BfmI	CTRYAG	2 cut(s)	157, 1489
BisI	GCNGC	7 cut(s)	24, 84, 462, 1235, 1333, 1950, 2128
BlsI	GCNGC	7 cut(s)	25, 85, 463, 1236, 1334, 1951, 2129
BmcAI	AGTACT	1 cut(s)	1471
Bme1390I	CCNGG	8 cut(s)	126, 1122, 1205, 1365, 1377, 1597, 2060, 2274
Bme18I	GGWCC	6 cut(s)	269, 793, 1124, 1371, 1520, 2452
BmeRI	GACNNNNNGTC	1 cut(s)	611
BmeT110I	CYCGRG	2 cut(s)	592, 905
BmgT120I	GGNCC	9 cut(s)	127, 269, 793, 1124, 1371, 1520, 1577, 2276, 2452
BmiI	GGNNCC	4 cut(s)	270, 1373, 2064, 2438
BmrFI	CCNGG	8 cut(s)	126, 1122, 1205, 1365, 1377, 1597, 2060, 2274
BmrI	ACTGGG	1 cut(s)	2173
BmsI	GCATC	3 cut(s)	292, 396, 1801
BmtI	GCTAGC	1 cut(s)	2417
BmuI	ACTGGG	1 cut(s)	2173
Bpu10I	CCTNAGC	1 cut(s)	465
BpuEI	CTTGAG	3 cut(s)	71, 309, 1991
BpuMI	CCSGG	3 cut(s)	126, 1365, 1377
BsaAI	YACGTR	1 cut(s)	403
BsaBI	GATNNNNATC	2 cut(s)	2372, 2376
BsaI	GGTCTC	1 cut(s)	619
BsaXI	ACNNNNNCTCC	4 cut(s)	1003, 1033, 2168, 2198
Bsc4I	CCNNNNNNNGG	4 cut(s)	131, 674, 1209, 2206
Bse118I	RCCGGY	1 cut(s)	2433
Bse1I	ACTGG	4 cut(s)	881, 1388, 2083, 2168
Bse3DI	GCAATG	1 cut(s)	2217
Bse8I	GATNNNNATC	2 cut(s)	2372, 2376
BseBI	CCWGG	5 cut(s)	1122, 1205, 1597, 2060, 2274
BseGI	GGATG	5 cut(s)	633, 756, 925, 1189, 1827
BseJI	GATNNNNATC	2 cut(s)	2372, 2376
BseLI	CCNNNNNNNGG	4 cut(s)	131, 674, 1209, 2206
BseMI	GCAATG	1 cut(s)	2217
BseMII	CTCAG	6 cut(s)	456, 1308, 1410, 1990, 2162, 2470
BseNI	ACTGG	4 cut(s)	881, 1388, 2083, 2168
BseRI	GAGGAG	7 cut(s)	595, 600, 612, 1175, 1193, 1317, 2429
BseSI	GKGCMC	3 cut(s)	2059, 2178, 2310
BseXI	GCAGC	5 cut(s)	35, 70, 473, 1246, 1936
Bsh1236I	CGCG	1 cut(s)	28
BshFI	GGCC	7 cut(s)	129, 135, 239, 260, 880, 1579, 2278
BsiHKAI	GWGCWC	5 cut(s)	525, 750, 1977, 2178, 2310
BsiHKCI	CYCGRG	2 cut(s)	592, 905
BsiSI	CCGG	4 cut(s)	125, 1364, 1377, 2434
BslFI	GGGAC	2 cut(s)	282, 1802
BslI	CCNNNNNNNGG	4 cut(s)	131, 674, 1209, 2206
BsmAI	GTCTC	3 cut(s)	440, 595, 619
BsmFI	GGGAC	2 cut(s)	282, 1802
BsnI	GGCC	7 cut(s)	129, 135, 239, 260, 880, 1579, 2278
Bso31I	GGTCTC	1 cut(s)	619
BsoBI	CYCGRG	2 cut(s)	592, 905
Bsp1286I	GDGCHC	6 cut(s)	525, 750, 1977, 2059, 2178, 2310
Bsp143I	GATC	7 cut(s)	195, 924, 997, 1791, 2151, 2263, 2343
Bsp19I	CCATGG	1 cut(s)	1309
BspACI	CCGC	5 cut(s)	28, 796, 1333, 2127, 2187
BspANI	GGCC	7 cut(s)	129, 135, 239, 260, 880, 1579, 2278
BspCNI	CTCAG	6 cut(s)	457, 1307, 1409, 1989, 2161, 2469
BspFNI	CGCG	1 cut(s)	28
BspHI	TCATGA	1 cut(s)	750
BspLI	GGNNCC	4 cut(s)	270, 1373, 2064, 2438
BspOI	GCTAGC	1 cut(s)	2417
BspPI	GGATC	2 cut(s)	203, 2146
BspQI	GCTCTTC	1 cut(s)	1501
BspTNI	GGTCTC	1 cut(s)	619
BsrDI	GCAATG	1 cut(s)	2217
BsrFI	RCCGGY	1 cut(s)	2433
BsrI	ACTGG	4 cut(s)	881, 1388, 2083, 2168
BssAI	RCCGGY	1 cut(s)	2433
BssMI	GATC	7 cut(s)	195, 924, 997, 1791, 2151, 2263, 2343
BssSI	CACGAG	2 cut(s)	729, 1671
BssT1I	CCWWGG	4 cut(s)	130, 306, 1309, 2230
Bst2BI	CACGAG	2 cut(s)	729, 1671
Bst2UI	CCWGG	5 cut(s)	1122, 1205, 1597, 2060, 2274
Bst4CI	ACNGT	4 cut(s)	161, 367, 439, 1877
Bst6I	CTCTTC	8 cut(s)	497, 1501, 1516, 1527, 1667, 1903, 2117, 2447
BstBAI	YACGTR	1 cut(s)	403
BstC8I	GCNNGC	3 cut(s)	542, 2339, 2415
BstDEI	CTNAG	8 cut(s)	465, 1294, 1396, 1581, 1976, 2148, 2327, 2456
BstDSI	CCRYGG	1 cut(s)	1309
BstF5I	GGATG	5 cut(s)	633, 756, 925, 1189, 1827
BstFNI	CGCG	1 cut(s)	28
BstHHI	GCGC	1 cut(s)	28
BstKTI	GATC	7 cut(s)	198, 927, 1000, 1794, 2154, 2266, 2346
BstMAI	GTCTC	3 cut(s)	440, 595, 619
BstMBI	GATC	7 cut(s)	195, 924, 997, 1791, 2151, 2263, 2343
BstMWI	GCNNNNNNNGC	8 cut(s)	23, 541, 1089, 1694, 1877, 1934, 2105, 2250
BstNI	CCWGG	5 cut(s)	1122, 1205, 1597, 2060, 2274
BstNSI	RCATGY	1 cut(s)	1733
BstSCI	CCNGG	8 cut(s)	124, 1120, 1203, 1363, 1375, 1595, 2058, 2272
BstSFI	CTRYAG	2 cut(s)	157, 1489
BstSLI	GKGCMC	3 cut(s)	2059, 2178, 2310
BstUI	CGCG	1 cut(s)	28
BstV1I	GCAGC	5 cut(s)	35, 70, 473, 1246, 1936
BstX2I	RGATCY	1 cut(s)	2151
BstXI	CCANNNNNNTGG	3 cut(s)	866, 1344, 2163
BstYI	RGATCY	1 cut(s)	2151
BsuRI	GGCC	7 cut(s)	129, 135, 239, 260, 880, 1579, 2278
BtgI	CCRYGG	1 cut(s)	1309
BtsCI	GGATG	5 cut(s)	633, 756, 925, 1189, 1827
BtsIMutI	CAGTG	4 cut(s)	166, 1302, 1404, 2076
Cac8I	GCNNGC	3 cut(s)	542, 2339, 2415
CaiI	CAGNNNCTG	1 cut(s)	887
CciI	TCATGA	1 cut(s)	750
CfoI	GCGC	1 cut(s)	28
Cfr10I	RCCGGY	1 cut(s)	2433
Cfr13I	GGNCC	9 cut(s)	127, 269, 793, 1124, 1371, 1520, 1577, 2276, 2452
CseI	GACGC	1 cut(s)	44
Csp6I	GTAC	6 cut(s)	1011, 1470, 1629, 1650, 2145, 2197
CspCI	CAANNNNNGTGG	2 cut(s)	90, 125
CviQI	GTAC	6 cut(s)	1011, 1470, 1629, 1650, 2145, 2197
DdeI	CTNAG	8 cut(s)	465, 1294, 1396, 1581, 1976, 2148, 2327, 2456
DpnI	GATC	7 cut(s)	197, 926, 999, 1793, 2153, 2265, 2345
DpnII	GATC	7 cut(s)	195, 924, 997, 1791, 2151, 2263, 2343
DriI	GACNNNNNGTC	1 cut(s)	611
EaeI	YGGCCR	1 cut(s)	258
Eam1104I	CTCTTC	8 cut(s)	497, 1501, 1516, 1527, 1667, 1903, 2117, 2447
Eam1105I	GACNNNNNGTC	1 cut(s)	611
EarI	CTCTTC	8 cut(s)	497, 1501, 1516, 1527, 1667, 1903, 2117, 2447
Ecl136II	GAGCTC	2 cut(s)	523, 1975
Eco130I	CCWWGG	4 cut(s)	130, 306, 1309, 2230
Eco147I	AGGCCT	1 cut(s)	135
Eco24I	GRGCYC	2 cut(s)	525, 1977
Eco31I	GGTCTC	1 cut(s)	619
Eco32I	GATATC	1 cut(s)	2374
Eco47I	GGWCC	6 cut(s)	269, 793, 1124, 1371, 1520, 2452
Eco53kI	GAGCTC	2 cut(s)	523, 1975
Eco57I	CTGAAG	1 cut(s)	89
Eco88I	CYCGRG	2 cut(s)	592, 905
EcoICRI	GAGCTC	2 cut(s)	523, 1975
EcoO109I	RGGNCCY	2 cut(s)	269, 1371
EcoRI	GAATTC	2 cut(s)	140, 2225
EcoRII	CCWGG	5 cut(s)	1120, 1203, 1595, 2058, 2272
EcoRV	GATATC	1 cut(s)	2374
EcoT14I	CCWWGG	4 cut(s)	130, 306, 1309, 2230
EcoT38I	GRGCYC	2 cut(s)	525, 1977
ErhI	CCWWGG	4 cut(s)	130, 306, 1309, 2230
FalI	AAGNNNNNCTT	6 cut(s)	198, 230, 318, 350, 1542, 1574
FaqI	GGGAC	2 cut(s)	282, 1802
FauNDI	CATATG	1 cut(s)	1516
FbaI	TGATCA	1 cut(s)	924
FblI	GTMKAC	2 cut(s)	972, 1488
Fnu4HI	GCNGC	7 cut(s)	24, 84, 462, 1235, 1333, 1950, 2128
FokI	GGATG	5 cut(s)	620, 743, 932, 1196, 1814
FriOI	GRGCYC	2 cut(s)	525, 1977
Fsp4HI	GCNGC	7 cut(s)	24, 84, 462, 1235, 1333, 1950, 2128
FspBI	CTAG	8 cut(s)	273, 809, 1268, 1356, 1464, 2067, 2258, 2414
GlaI	GCGC	1 cut(s)	27
GluI	GCNGC	7 cut(s)	24, 84, 462, 1235, 1333, 1950, 2128
HaeIII	GGCC	7 cut(s)	129, 135, 239, 260, 880, 1579, 2278
HapII	CCGG	4 cut(s)	125, 1364, 1377, 2434
HgaI	GACGC	1 cut(s)	44
HhaI	GCGC	1 cut(s)	28
Hin6I	GCGC	1 cut(s)	26
HinP1I	GCGC	1 cut(s)	26
HincII	GTYRAC	1 cut(s)	435
HindII	GTYRAC	1 cut(s)	435
HindIII	AAGCTT	1 cut(s)	207
HpaI	GTTAAC	1 cut(s)	435
HpaII	CCGG	4 cut(s)	125, 1364, 1377, 2434
HphI	GGTGA	4 cut(s)	260, 581, 727, 2262
Hpy166II	GTNNAC	8 cut(s)	435, 842, 973, 1489, 1753, 1912, 2176, 2308
Hpy188I	TCNGA	6 cut(s)	1144, 1721, 1979, 2151, 2348, 2459
Hpy8I	GTNNAC	8 cut(s)	435, 842, 973, 1489, 1753, 1912, 2176, 2308
HpyCH4III	ACNGT	4 cut(s)	161, 367, 439, 1877
HpyCH4IV	ACGT	3 cut(s)	402, 2143, 2239
HpyF10VI	GCNNNNNNNGC	8 cut(s)	23, 541, 1089, 1694, 1877, 1934, 2105, 2250
HpyF3I	CTNAG	8 cut(s)	465, 1294, 1396, 1581, 1976, 2148, 2327, 2456
HpySE526I	ACGT	3 cut(s)	402, 2143, 2239
HspAI	GCGC	1 cut(s)	26
Ksp22I	TGATCA	1 cut(s)	924
KspAI	GTTAAC	1 cut(s)	435
Kzo9I	GATC	7 cut(s)	195, 924, 997, 1791, 2151, 2263, 2343
LguI	GCTCTTC	1 cut(s)	1501
LmnI	GCTCC	2 cut(s)	1089, 2442
Lsp1109I	GCAGC	5 cut(s)	35, 70, 473, 1246, 1936
LweI	GCATC	3 cut(s)	292, 396, 1801
MaeI	CTAG	8 cut(s)	273, 809, 1268, 1356, 1464, 2067, 2258, 2414
MaeII	ACGT	3 cut(s)	402, 2143, 2239
MaeIII	GTNAC	2 cut(s)	367, 2069
MalI	GATC	7 cut(s)	197, 926, 999, 1793, 2153, 2265, 2345
MboI	GATC	7 cut(s)	195, 924, 997, 1791, 2151, 2263, 2343
MfeI	CAATTG	1 cut(s)	618
MflI	RGATCY	1 cut(s)	2151
MhlI	GDGCHC	6 cut(s)	525, 750, 1977, 2059, 2178, 2310
MlsI	TGGCCA	1 cut(s)	260
MluCI	AATT	9 cut(s)	140, 165, 618, 624, 1097, 1218, 2158, 2190, 2225
MluNI	TGGCCA	1 cut(s)	260
MlyI	GAGTC	9 cut(s)	360, 522, 597, 677, 950, 1342, 1502, 1745, 2372
MmeI	TCCRAC	2 cut(s)	1524, 2383
Mox20I	TGGCCA	1 cut(s)	260
MscI	TGGCCA	1 cut(s)	260
MseI	TTAA	4 cut(s)	168, 219, 434, 2193
MslI	CAYNNNNRTG	3 cut(s)	386, 1342, 2048
Msp20I	TGGCCA	1 cut(s)	260
MspA1I	CMGCKG	2 cut(s)	421, 464
MspI	CCGG	4 cut(s)	125, 1364, 1377, 2434
MspR9I	CCNGG	8 cut(s)	126, 1122, 1205, 1365, 1377, 1597, 2060, 2274
MunI	CAATTG	1 cut(s)	618
MvaI	CCWGG	5 cut(s)	1122, 1205, 1597, 2060, 2274
MvnI	CGCG	1 cut(s)	28
MwoI	GCNNNNNNNGC	8 cut(s)	23, 541, 1089, 1694, 1877, 1934, 2105, 2250
NciI	CCSGG	3 cut(s)	126, 1365, 1377
NcoI	CCATGG	1 cut(s)	1309
NdeI	CATATG	1 cut(s)	1516
NdeII	GATC	7 cut(s)	195, 924, 997, 1791, 2151, 2263, 2343
NheI	GCTAGC	1 cut(s)	2413
NlaIV	GGNNCC	4 cut(s)	270, 1373, 2064, 2438
NmeAIII	GCCGAG	2 cut(s)	516, 1423
NspI	RCATGY	1 cut(s)	1733
PaeR7I	CTCGAG	1 cut(s)	905
PagI	TCATGA	1 cut(s)	750
PceI	AGGCCT	1 cut(s)	135
PciSI	GCTCTTC	1 cut(s)	1501
PfeI	GAWTC	6 cut(s)	121, 987, 1130, 2321, 2406, 2460
PflMI	CCANNNNNTGG	1 cut(s)	674
PfoI	TCCNGGA	1 cut(s)	1363
PkrI	GCNGC	7 cut(s)	25, 85, 463, 1236, 1334, 1951, 2129
PleI	GAGTC	9 cut(s)	359, 521, 596, 677, 949, 1342, 1502, 1744, 2371
PpsI	GAGTC	9 cut(s)	359, 521, 596, 677, 949, 1342, 1502, 1744, 2371
Ppu21I	YACGTR	1 cut(s)	403
PpuMI	RGGWCCY	2 cut(s)	269, 1371
PsiI	TTATAA	2 cut(s)	1053, 2024
Psp124BI	GAGCTC	2 cut(s)	525, 1977
Psp5II	RGGWCCY	2 cut(s)	269, 1371
Psp6I	CCWGG	5 cut(s)	1120, 1203, 1595, 2058, 2272
PspGI	CCWGG	5 cut(s)	1120, 1203, 1595, 2058, 2272
PspN4I	GGNNCC	4 cut(s)	270, 1373, 2064, 2438
PspPI	GGNCC	9 cut(s)	127, 269, 793, 1124, 1371, 1520, 1577, 2276, 2452
PspPPI	RGGWCCY	2 cut(s)	269, 1371
PspXI	VCTCGAGB	1 cut(s)	905
PstNI	CAGNNNCTG	1 cut(s)	887
PsuI	RGATCY	1 cut(s)	2151
PvuII	CAGCTG	2 cut(s)	421, 464
RsaI	GTAC	6 cut(s)	1012, 1471, 1630, 1651, 2146, 2198
RsaNI	GTAC	6 cut(s)	1011, 1470, 1629, 1650, 2145, 2197
RseI	CAYNNNNRTG	3 cut(s)	386, 1342, 2048
SacI	GAGCTC	2 cut(s)	525, 1977
SapI	GCTCTTC	1 cut(s)	1501
SaqAI	TTAA	4 cut(s)	168, 219, 434, 2193
SatI	GCNGC	7 cut(s)	24, 84, 462, 1235, 1333, 1950, 2128
Sau3AI	GATC	7 cut(s)	195, 924, 997, 1791, 2151, 2263, 2343
Sau96I	GGNCC	9 cut(s)	127, 269, 793, 1124, 1371, 1520, 1577, 2276, 2452
ScaI	AGTACT	1 cut(s)	1471
SchI	GAGTC	9 cut(s)	360, 522, 597, 677, 950, 1342, 1502, 1745, 2372
ScrFI	CCNGG	8 cut(s)	126, 1122, 1205, 1365, 1377, 1597, 2060, 2274
SduI	GDGCHC	6 cut(s)	525, 750, 1977, 2059, 2178, 2310
SfaNI	GCATC	3 cut(s)	292, 396, 1801
SfcI	CTRYAG	2 cut(s)	157, 1489
Sfr274I	CTCGAG	1 cut(s)	905
SinI	GGWCC	6 cut(s)	269, 793, 1124, 1371, 1520, 2452
SlaI	CTCGAG	1 cut(s)	905
SmiMI	CAYNNNNRTG	3 cut(s)	386, 1342, 2048
SmlI	CTYRAG	4 cut(s)	50, 324, 905, 1970
SmoI	CTYRAG	4 cut(s)	50, 324, 905, 1970
Sse9I	AATT	9 cut(s)	140, 165, 618, 624, 1097, 1218, 2158, 2190, 2225
SseBI	AGGCCT	1 cut(s)	135
SsiI	CCGC	5 cut(s)	28, 796, 1333, 2127, 2187
SspMI	CTAG	8 cut(s)	273, 809, 1268, 1356, 1464, 2067, 2258, 2414
SstI	GAGCTC	2 cut(s)	525, 1977
StuI	AGGCCT	1 cut(s)	135
StyD4I	CCNGG	8 cut(s)	124, 1120, 1203, 1363, 1375, 1595, 2058, 2272
StyI	CCWWGG	4 cut(s)	130, 306, 1309, 2230
TaaI	ACNGT	4 cut(s)	161, 367, 439, 1877
TaiI	ACGT	3 cut(s)	405, 2146, 2242
TaqI	TCGA	7 cut(s)	113, 300, 354, 906, 1115, 1539, 2366
TasI	AATT	9 cut(s)	140, 165, 618, 624, 1097, 1218, 2158, 2190, 2225
TatI	WGTACW	1 cut(s)	1469
TauI	GCSGC	2 cut(s)	1335, 2130
TfiI	GAWTC	6 cut(s)	121, 987, 1130, 2321, 2406, 2460
Tru1I	TTAA	4 cut(s)	168, 219, 434, 2193
Tru9I	TTAA	4 cut(s)	168, 219, 434, 2193
TscAI	CASTG	4 cut(s)	166, 1302, 1404, 2083
TseI	GCWGC	5 cut(s)	23, 83, 461, 1234, 1949
TspDTI	ATGAA	9 cut(s)	398, 442, 678, 1211, 1503, 1816, 1831, 1837, 2238
TspGWI	ACGGA	2 cut(s)	622, 968
TspRI	CASTG	4 cut(s)	166, 1302, 1404, 2083
Van91I	CCANNNNNTGG	1 cut(s)	674
VneI	GTGCAC	2 cut(s)	2174, 2306
VpaK11BI	GGWCC	6 cut(s)	269, 793, 1124, 1371, 1520, 2452
XapI	RAATTY	2 cut(s)	140, 2225
XceI	RCATGY	1 cut(s)	1733
XhoI	CTCGAG	1 cut(s)	905
XmiI	GTMKAC	2 cut(s)	972, 1488
XspI	CTAG	8 cut(s)	273, 809, 1268, 1356, 1464, 2067, 2258, 2414
ZrmI	AGTACT	1 cut(s)	1471

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.