Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0012623

Physical Location & Seq

Genomic Coordinates Forward (+)

40446909 .. 40449774

Gene Structure 2866 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ45607

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2475 bp

ATGAGCATCATGGCAATGTCAAAGGCAAAGATAGGGCGGAATGAAAGAAAAAAAAGCCTTGAGAGTTTATTGGACATGGACAAAATAGTAGCTGCAAAGATTTCTGTTCCACTTCAATTGTCGAAGATGATTCCAGGCCAAGGCCTTGAATTCAACAACCTTTCCTACAGTGTAACAAAACGAATAAAGAAAGATGGGGTTTGGATCAAGAAGGAAGCTTATCTTCTTAATGACATCTCTGGTCATGCAGTACAAGGTGAGATTATGGCCATTATGGGGCCTAGTGGTGCTGGAAAATCCACATTTCTCGATGCCTTAGCAGGAAGGATTGCTCAAGGAAGTCTTGAAGGCTCTGTTAGAGTCGATGGAAAAACTGTTACTACAAGCTACATGAAGATGGTTTCCTCTTATGTGATGCAAGATGACCAACTATTCCCAATGTTGACCGTGTTTGAGACTTTCATGTTTGCAGCTGAGGTTAGGCTTCCTCCTTCTCTTTCCAGAGATGAGAAGAGAAAGAGAGTCTATGAGCTCCTTGACCAACTCGGCTTGCAGACTGCAACACATACATATATTGGTGATGAGGGGAGGAGAGGAGTCTCAGGAGGTGAAAGACGCAGGGTATCAATCGGAATTGACATCATCCATAAACCTTCTCTACTGTTTCTTGATGAACCAACTTCTGGTCTTGACTCCACGAGTGCTTACAGTGTTGTAGAGAAGGTGAAAGAAATAGCTCGAGGCGGTAGCATTGTGCTCATGACTATCCATCAGCCTTCCTATCGTATTCAAAATCTCTTGGACCGCTTGACAGTCCTAGCAAGAGGAAAACTAATATATTTGGGAAGTCCACATGGTTTATCTGCTCACCTTTCTGGATTTGGAAGGCCAGTACCTGATGGAGAAAACAACCTTGAGTATCTCCTGGATGTGATTAGAGAATATGATGAGTCAAATGTAGGACTAGAACCGCTTGTTGTCTACCTTTGCGATGGAATCAAACCTGATCAGGTGTCAAGAACCCCAATTGCAAGAACACCAAAGACACCACGAACTCCTTATAAAAAGACCCCTTCATCTAAACACATGCTCAACCTCAGGAGCAACTCGACACCTGGACCAAATTCTCGCCAATCTGATGATTATGATGATGAGGAGGACGATGAGTTTGAGGATGAGAACTTTGACAACTCCCTAGAAAGGAAATCAATTCAGACACCAATGCAGCACTTTAGAAGTGGTATCTATAACCCTCGTTTAGCTTCACATTTCTACAAAGATTTCTCAGTGTGGATATATCATGGTGTCAAAGGAACTCCTCGCCGCCCACCATCATGGACTCCTGCTAGAACTCCAGGAAGGACCCCTGGAAAGACACCAATCTCAATGTCAAGACTAAGAAGTGTTGTTGAAAACCAATATGCAACACCTCAGCACTACCCTTCTAGGCCTAGTAGGACTAAAGCCCCTATTATCTATAGCCCTTCCATCGATGACTCTTCATATGGACAATCATATGAAGAGTTTGAGATGGAAGAAGTTGAGCTTGATGAGATAGAACTCGGGCCTAAGTTTGCAAACCCCTGGCTCCGTGAAGTTGCAGTCCTCTCATGGCGTACAACACTCAATGTGATTCGTACCCCTGAACTCTTCCTCTCGCGAGAGATTGTGTTGGCTGTCATGGCACTCATTCTATCTTCCCTTTTCAATAACCTACATGAGGAGAACTTCAAAAATGTAAACAGGCTTCTCAACTTCTACATATTTGCTGTTTGCCTGGTCTTCTTTTCCTCCAATGATGCTGTCCCAACTTTCATCCAAGAAAGGTTCATTTTCATCAGGGAAACTTCCCATAATGCTTATCGTGCTTCTTCCTATGTCATATCTTCCCTTATTGTTTACCTCCCATTTTTCGCCATTCAAGCTTTCACATTTGCTGCCATAACCAGATTCATGCTTCACCTCAGAAGTAGTCTTTTCTACTTTTGGATAATCCTGTATGCCTCACTTATAACCACCAATGCTTATGTCATGCTTGTGAGTGCCCTGGTTCCTAGTTACATTACTGGATATGCTGTAGTGATAGCTACCACAGCTCTGTTCTTTCTCACTTGTGGTTTTTTCTTGAAACGTACTCAGATCCCAAATTACTGGGTTTGGGTGCACTACATCTCTGCGATTAAGTATCCATTTGAGGCAATGCTAACAAATGAATTCAAAAATATACACTGCTACACTGGCAATGCAGCGGATCTTTCACCTGGGCCTTTAGGAGATCTGAAGTTAAGTAAAGTGCACAATGACACACCATCGCTCAGAGGTTGCCTGCTGATTGGACAAGATGTTATACAGTCAATGGATATCAATCACGATAACATCTGGTATGATATAGGAATCTTGCTAGCTTGGGGTGTTCTATACCGGCTTCTCTTCTACATGGTCCTCAGATTCTATTCCAAGAATGAGAGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005775 GO:0005886 GO:0006810 GO:0007034 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009987 GO:0010208 GO:0010927 GO:0015399 GO:0015405 GO:0015893 GO:0016020 GO:0016021 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0022804 GO:0022857 GO:0030198 GO:0031224 GO:0031974 GO:0032501 GO:0032502 GO:0032989 GO:0042221 GO:0042493 GO:0042623 GO:0042626 GO:0042891 GO:0043062 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043492 GO:0044085 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045229 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0070013 GO:0071840 GO:0071944 GO:0085029

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

824

Amino Acids

93.42

Weight (kDa)

8.66

Isoelectric Point (pI)

42.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	76 - 228	6.3e-29	ABC transporter
ABC2_membrane	PF01061	532 - 739	1.7e-38	ABC-2 type transporter
ABC2_membrane_3	PF12698	574 - 811	5.2e-07	ABC-2 family transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012623)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g17530
malus_domestica	MD06G1228700.v1.1 MD14G1237900.v1.1
prunus_persica	Prupe.5G235100_v2.0.a1
pyrus_communis	pycom06g20500 pycom14g19900
rosa_chinensis	RchiOBHm_Chr3g0493261 RchiOBHm_Chr7g0178121
rosa_laevigata	RLG00000005469
rosa_multiflora	Rmu_sc0000425.1_g000011 Rmu_sc0005324.1_g000001
rosa_roxburghii	Rroxscaffold_6G00391680
rosa_rugosa	Rorug03G0260000 Rorug06G0413700
rosa_samantha	Rh3DG344200 Rh7CG012900 Rh7DG013200
rosa_wichuraiana	Rw3G027160 Rw7G001030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1062, 2012
AccB7I	CCANNNNNTGG	1 cut(s)	683
AccI	GTMKAC	1 cut(s)	981
AccII	CGCG	1 cut(s)	1660
AciI	CCGC	6 cut(s)	37, 744, 805, 971, 1324, 2249
AclWI	GGATC	3 cut(s)	212, 2134, 2259
AcoI	YGGCCR	1 cut(s)	267
AcsI	RAATTY	3 cut(s)	149, 1123, 2213
AcuI	CTGAAG	1 cut(s)	2300
AfaI	GTAC	5 cut(s)	252, 894, 1618, 1639, 2134
AfiI	CCNNNNNNNGG	5 cut(s)	140, 276, 683, 1200, 1720
AjnI	CCWGG	9 cut(s)	133, 924, 1114, 1354, 1366, 1583, 1776, 2046, 2260
Alw21I	GWGCWC	4 cut(s)	534, 759, 2166, 2298
Alw26I	GTCTC	2 cut(s)	449, 604
Alw44I	GTGCAC	2 cut(s)	2162, 2294
AlwI	GGATC	3 cut(s)	212, 2134, 2259
AlwNI	CAGNNNCTG	1 cut(s)	896
Ama87I	CYCGRG	2 cut(s)	738, 1562
AoxI	GGCC	8 cut(s)	136, 142, 267, 278, 887, 1448, 1565, 2264
ApaLI	GTGCAC	2 cut(s)	2162, 2294
ApeKI	GCWGC	5 cut(s)	92, 470, 1225, 1937, 2246
ApoI	RAATTY	3 cut(s)	149, 1123, 2213
ArsI	GACNNNNNNTTYG	2 cut(s)	1151, 1183
AspS9I	GGNCC	7 cut(s)	278, 802, 1118, 1362, 1565, 2264, 2440
AsuHPI	GGTGA	7 cut(s)	269, 590, 620, 736, 860, 1952, 2250
AsuNHI	GCTAGC	1 cut(s)	2401
AvaI	CYCGRG	2 cut(s)	738, 1562
AvaII	GGWCC	4 cut(s)	802, 1118, 1362, 2440
AxyI	CCTNAGG	1 cut(s)	1097
BaeGI	GKGCMC	3 cut(s)	2047, 2166, 2298
BalI	TGGCCA	1 cut(s)	269
BanII	GRGCYC	1 cut(s)	534
BarI	GAAGNNNNNNTAC	2 cut(s)	1731, 1763
BauI	CACGAG	1 cut(s)	697
BbsI	GAAGAC	1 cut(s)	1774
Bbv12I	GWGCWC	4 cut(s)	534, 759, 2166, 2298
BbvCI	CCTCAGC	2 cut(s)	474, 1431
BbvI	GCAGC	5 cut(s)	79, 482, 1237, 1924, 2258
BciT130I	CCWGG	9 cut(s)	135, 926, 1116, 1356, 1368, 1585, 1778, 2048, 2262
BciVI	GTATCC	1 cut(s)	2196
BclI	TGATCA	1 cut(s)	1006
BcoDI	GTCTC	2 cut(s)	449, 604
BfaI	CTAG	9 cut(s)	282, 818, 965, 1196, 1347, 1446, 1452, 2055, 2402
BfmI	CTRYAG	3 cut(s)	166, 1477, 2076
BfuI	GTATCC	1 cut(s)	2196
BglII	AGATCT	1 cut(s)	2275
BisI	GCNGC	6 cut(s)	93, 471, 1226, 1324, 1938, 2247
BlsI	GCNGC	6 cut(s)	94, 472, 1227, 1325, 1939, 2248
Bme1390I	CCNGG	9 cut(s)	135, 926, 1116, 1356, 1368, 1585, 1778, 2048, 2262
Bme18I	GGWCC	4 cut(s)	802, 1118, 1362, 2440
BmeT110I	CYCGRG	2 cut(s)	738, 1562
BmgT120I	GGNCC	7 cut(s)	278, 802, 1118, 1362, 1565, 2264, 2440
BmiI	GGNNCC	4 cut(s)	279, 1364, 1589, 2052
BmrFI	CCNGG	9 cut(s)	135, 926, 1116, 1356, 1368, 1585, 1778, 2048, 2262
BmrI	ACTGGG	1 cut(s)	2161
BmsI	GCATC	4 cut(s)	15, 301, 405, 1789
BmtI	GCTAGC	1 cut(s)	2405
BmuI	ACTGGG	1 cut(s)	2161
BpiI	GAAGAC	1 cut(s)	1774
BpmI	CTGGAG	1 cut(s)	1338
Bpu10I	CCTNAGC	3 cut(s)	316, 474, 1431
BpuEI	CTTGAG	3 cut(s)	80, 318, 935
Bsa29I	ATCGAT	1 cut(s)	1491
BsaBI	GATNNNNATC	1 cut(s)	2364
BsaJI	CCNNGG	5 cut(s)	139, 1366, 1583, 2046, 2261
Bsc4I	CCNNNNNNNGG	5 cut(s)	140, 276, 683, 1200, 1720
Bse118I	RCCGGY	1 cut(s)	2421
Bse1I	ACTGG	4 cut(s)	890, 2071, 2156, 2242
Bse21I	CCTNAGG	1 cut(s)	1097
Bse3DI	GCAATG	3 cut(s)	21, 2205, 2248
Bse8I	GATNNNNATC	1 cut(s)	2364
BseBI	CCWGG	9 cut(s)	135, 926, 1116, 1356, 1368, 1585, 1778, 2048, 2262
BseCI	ATCGAT	1 cut(s)	1491
BseDI	CCNNGG	5 cut(s)	139, 1366, 1583, 2046, 2261
BseGI	GGATG	4 cut(s)	642, 934, 1180, 1815
BseJI	GATNNNNATC	1 cut(s)	2364
BseLI	CCNNNNNNNGG	5 cut(s)	140, 276, 683, 1200, 1720
BseMI	GCAATG	3 cut(s)	21, 2205, 2248
BseMII	CTCAG	9 cut(s)	465, 615, 1111, 1299, 1445, 1978, 2150, 2329, 2458
BseNI	ACTGG	4 cut(s)	890, 2071, 2156, 2242
BseRI	GAGGAG	5 cut(s)	604, 609, 1169, 1308, 1736
BseSI	GKGCMC	3 cut(s)	2047, 2166, 2298
BseXI	GCAGC	5 cut(s)	79, 482, 1237, 1924, 2258
Bsh1236I	CGCG	1 cut(s)	1660
BshFI	GGCC	8 cut(s)	138, 144, 269, 280, 889, 1450, 1567, 2266
BshVI	ATCGAT	1 cut(s)	1491
BsiHKAI	GWGCWC	4 cut(s)	534, 759, 2166, 2298
BsiHKCI	CYCGRG	2 cut(s)	738, 1562
BsiSI	CCGG	1 cut(s)	2422
BslFI	GGGAC	1 cut(s)	1790
BslI	CCNNNNNNNGG	5 cut(s)	140, 276, 683, 1200, 1720
BsmAI	GTCTC	2 cut(s)	449, 604
BsmFI	GGGAC	1 cut(s)	1790
BsnI	GGCC	8 cut(s)	138, 144, 269, 280, 889, 1450, 1567, 2266
BsoBI	CYCGRG	2 cut(s)	738, 1562
Bsp1286I	GDGCHC	5 cut(s)	534, 759, 2047, 2166, 2298
Bsp143I	GATC	5 cut(s)	204, 1006, 2139, 2251, 2275
Bsp68I	TCGCGA	1 cut(s)	1660
BspACI	CCGC	6 cut(s)	37, 744, 805, 971, 1324, 2249
BspANI	GGCC	8 cut(s)	138, 144, 269, 280, 889, 1450, 1567, 2266
BspCNI	CTCAG	9 cut(s)	466, 614, 1110, 1298, 1444, 1977, 2149, 2328, 2457
BspDI	ATCGAT	1 cut(s)	1491
BspFNI	CGCG	1 cut(s)	1660
BspHI	TCATGA	1 cut(s)	759
BspLI	GGNNCC	4 cut(s)	279, 1364, 1589, 2052
BspOI	GCTAGC	1 cut(s)	2405
BspPI	GGATC	3 cut(s)	212, 2134, 2259
BsrDI	GCAATG	3 cut(s)	21, 2205, 2248
BsrFI	RCCGGY	1 cut(s)	2421
BsrI	ACTGG	4 cut(s)	890, 2071, 2156, 2242
BssAI	RCCGGY	1 cut(s)	2421
BssECI	CCNNGG	5 cut(s)	139, 1366, 1583, 2046, 2261
BssMI	GATC	5 cut(s)	204, 1006, 2139, 2251, 2275
BssSI	CACGAG	1 cut(s)	697
BssT1I	CCWWGG	1 cut(s)	139
Bst2BI	CACGAG	1 cut(s)	697
Bst2UI	CCWGG	9 cut(s)	135, 926, 1116, 1356, 1368, 1585, 1778, 2048, 2262
Bst4CI	ACNGT	7 cut(s)	170, 376, 448, 663, 710, 814, 2352
Bst6I	CTCTTC	5 cut(s)	506, 1504, 1515, 1655, 2435
BstC8I	GCNNGC	3 cut(s)	551, 2327, 2403
BstENI	CCTNNNNNAGG	1 cut(s)	1718
BstF5I	GGATG	4 cut(s)	642, 934, 1180, 1815
BstFNI	CGCG	1 cut(s)	1660
BstKTI	GATC	5 cut(s)	207, 1009, 2142, 2254, 2278
BstMAI	GTCTC	2 cut(s)	449, 604
BstMBI	GATC	5 cut(s)	204, 1006, 2139, 2251, 2275
BstMWI	GCNNNNNNNGC	5 cut(s)	1682, 1865, 1922, 2093, 2238
BstNI	CCWGG	9 cut(s)	135, 926, 1116, 1356, 1368, 1585, 1778, 2048, 2262
BstNSI	RCATGY	1 cut(s)	1090
BstSCI	CCNGG	9 cut(s)	133, 924, 1114, 1354, 1366, 1583, 1776, 2046, 2260
BstSFI	CTRYAG	3 cut(s)	166, 1477, 2076
BstSLI	GKGCMC	3 cut(s)	2047, 2166, 2298
BstUI	CGCG	1 cut(s)	1660
BstV1I	GCAGC	5 cut(s)	79, 482, 1237, 1924, 2258
BstV2I	GAAGAC	1 cut(s)	1774
BstX2I	RGATCY	3 cut(s)	2139, 2251, 2275
BstXI	CCANNNNNNTGG	2 cut(s)	1335, 2151
BstYI	RGATCY	3 cut(s)	2139, 2251, 2275
Bsu15I	ATCGAT	1 cut(s)	1491
Bsu36I	CCTNAGG	1 cut(s)	1097
BsuI	GTATCC	1 cut(s)	2196
BsuRI	GGCC	8 cut(s)	138, 144, 269, 280, 889, 1450, 1567, 2266
BsuTUI	ATCGAT	1 cut(s)	1491
BtgZI	GCGATG	2 cut(s)	1005, 2295
BtsCI	GGATG	4 cut(s)	642, 934, 1180, 1815
BtsI	GCAGTG	1 cut(s)	2227
BtsIMutI	CAGTG	5 cut(s)	175, 715, 1293, 2227, 2235
BtuMI	TCGCGA	1 cut(s)	1660
Cac8I	GCNNGC	3 cut(s)	551, 2327, 2403
CaiI	CAGNNNCTG	1 cut(s)	896
CciI	TCATGA	1 cut(s)	759
Cfr10I	RCCGGY	1 cut(s)	2421
Cfr13I	GGNCC	7 cut(s)	278, 802, 1118, 1362, 1565, 2264, 2440
ClaI	ATCGAT	1 cut(s)	1491
CseI	GACGC	1 cut(s)	624
Csp6I	GTAC	5 cut(s)	251, 893, 1617, 1638, 2133
CspCI	CAANNNNNGTGG	2 cut(s)	99, 134
CviQI	GTAC	5 cut(s)	251, 893, 1617, 1638, 2133
DpnI	GATC	5 cut(s)	206, 1008, 2141, 2253, 2277
DpnII	GATC	5 cut(s)	204, 1006, 2139, 2251, 2275
EaeI	YGGCCR	1 cut(s)	267
Eam1104I	CTCTTC	5 cut(s)	506, 1504, 1515, 1655, 2435
EarI	CTCTTC	5 cut(s)	506, 1504, 1515, 1655, 2435
EciI	GGCGGA	1 cut(s)	52
Ecl136II	GAGCTC	1 cut(s)	532
Eco130I	CCWWGG	1 cut(s)	139
Eco147I	AGGCCT	2 cut(s)	144, 1450
Eco24I	GRGCYC	1 cut(s)	534
Eco32I	GATATC	1 cut(s)	2362
Eco47I	GGWCC	4 cut(s)	802, 1118, 1362, 2440
Eco53kI	GAGCTC	1 cut(s)	532
Eco57I	CTGAAG	1 cut(s)	2300
Eco81I	CCTNAGG	1 cut(s)	1097
Eco88I	CYCGRG	2 cut(s)	738, 1562
EcoICRI	GAGCTC	1 cut(s)	532
EcoNI	CCTNNNNNAGG	1 cut(s)	1718
EcoO109I	RGGNCCY	2 cut(s)	278, 1362
EcoRI	GAATTC	2 cut(s)	149, 2213
EcoRII	CCWGG	9 cut(s)	133, 924, 1114, 1354, 1366, 1583, 1776, 2046, 2260
EcoRV	GATATC	1 cut(s)	2362
EcoT14I	CCWWGG	1 cut(s)	139
EcoT38I	GRGCYC	1 cut(s)	534
ErhI	CCWWGG	1 cut(s)	139
FalI	AAGNNNNNCTT	6 cut(s)	207, 239, 327, 359, 1530, 1562
FaqI	GGGAC	1 cut(s)	1790
FauNDI	CATATG	2 cut(s)	1504, 1516
FbaI	TGATCA	1 cut(s)	1006
FblI	GTMKAC	1 cut(s)	981
Fnu4HI	GCNGC	6 cut(s)	93, 471, 1226, 1324, 1938, 2247
FokI	GGATG	4 cut(s)	629, 941, 1187, 1802
FriOI	GRGCYC	1 cut(s)	534
Fsp4HI	GCNGC	6 cut(s)	93, 471, 1226, 1324, 1938, 2247
FspBI	CTAG	9 cut(s)	282, 818, 965, 1196, 1347, 1446, 1452, 2055, 2402
GluI	GCNGC	6 cut(s)	93, 471, 1226, 1324, 1938, 2247
GsuI	CTGGAG	1 cut(s)	1338
HaeIII	GGCC	8 cut(s)	138, 144, 269, 280, 889, 1450, 1567, 2266
HapII	CCGG	1 cut(s)	2422
HgaI	GACGC	1 cut(s)	624
HincII	GTYRAC	1 cut(s)	444
HindII	GTYRAC	1 cut(s)	444
HindIII	AAGCTT	2 cut(s)	216, 1923
HpaII	CCGG	1 cut(s)	2422
HphI	GGTGA	7 cut(s)	269, 590, 620, 736, 860, 1952, 2250
Hpy166II	GTNNAC	7 cut(s)	444, 851, 982, 1741, 1900, 2164, 2296
Hpy188I	TCNGA	8 cut(s)	632, 1138, 1215, 1967, 2139, 2280, 2318, 2447
Hpy8I	GTNNAC	7 cut(s)	444, 851, 982, 1741, 1900, 2164, 2296
HpyCH4III	ACNGT	7 cut(s)	170, 376, 448, 663, 710, 814, 2352
HpyCH4IV	ACGT	1 cut(s)	2131
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1682, 1865, 1922, 2093, 2238
HpySE526I	ACGT	1 cut(s)	2131
Ksp22I	TGATCA	1 cut(s)	1006
Kzo9I	GATC	5 cut(s)	204, 1006, 2139, 2251, 2275
LmnI	GCTCC	3 cut(s)	537, 1101, 1593
Lsp1109I	GCAGC	5 cut(s)	79, 482, 1237, 1924, 2258
LweI	GCATC	4 cut(s)	15, 301, 405, 1789
MaeI	CTAG	9 cut(s)	282, 818, 965, 1196, 1347, 1446, 1452, 2055, 2402
MaeII	ACGT	1 cut(s)	2131
MaeIII	GTNAC	3 cut(s)	172, 376, 2057
MalI	GATC	5 cut(s)	206, 1008, 2141, 2253, 2277
MboI	GATC	5 cut(s)	204, 1006, 2139, 2251, 2275
MfeI	CAATTG	2 cut(s)	116, 1026
MflI	RGATCY	3 cut(s)	2139, 2251, 2275
MhlI	GDGCHC	5 cut(s)	534, 759, 2047, 2166, 2298
MlsI	TGGCCA	1 cut(s)	269
MluCI	AATT	8 cut(s)	116, 149, 633, 1026, 1123, 1209, 2146, 2213
MluNI	TGGCCA	1 cut(s)	269
MlyI	GAGTC	7 cut(s)	369, 531, 606, 686, 959, 1333, 1490
Mox20I	TGGCCA	1 cut(s)	269
MscI	TGGCCA	1 cut(s)	269
MseI	TTAA	3 cut(s)	228, 2181, 2285
MslI	CAYNNNNRTG	4 cut(s)	14, 395, 1333, 2036
Msp20I	TGGCCA	1 cut(s)	269
MspA1I	CMGCKG	2 cut(s)	473, 2249
MspI	CCGG	1 cut(s)	2422
MspR9I	CCNGG	9 cut(s)	135, 926, 1116, 1356, 1368, 1585, 1778, 2048, 2262
MunI	CAATTG	2 cut(s)	116, 1026
MvaI	CCWGG	9 cut(s)	135, 926, 1116, 1356, 1368, 1585, 1778, 2048, 2262
MvnI	CGCG	1 cut(s)	1660
MwoI	GCNNNNNNNGC	5 cut(s)	1682, 1865, 1922, 2093, 2238
NdeI	CATATG	2 cut(s)	1504, 1516
NdeII	GATC	5 cut(s)	204, 1006, 2139, 2251, 2275
NheI	GCTAGC	1 cut(s)	2401
NlaIV	GGNNCC	4 cut(s)	279, 1364, 1589, 2052
NmeAIII	GCCGAG	1 cut(s)	525
NruI	TCGCGA	1 cut(s)	1660
NspI	RCATGY	1 cut(s)	1090
PaeR7I	CTCGAG	1 cut(s)	738
PagI	TCATGA	1 cut(s)	759
PceI	AGGCCT	2 cut(s)	144, 1450
PfeI	GAWTC	6 cut(s)	130, 996, 1633, 1950, 2394, 2448
PflMI	CCANNNNNTGG	1 cut(s)	683
PfoI	TCCNGGA	2 cut(s)	924, 1354
PkrI	GCNGC	6 cut(s)	94, 472, 1227, 1325, 1939, 2248
PleI	GAGTC	7 cut(s)	368, 530, 605, 686, 958, 1333, 1490
PpsI	GAGTC	7 cut(s)	368, 530, 605, 686, 958, 1333, 1490
PpuMI	RGGWCCY	1 cut(s)	1362
PsiI	TTATAA	2 cut(s)	1062, 2012
Psp124BI	GAGCTC	1 cut(s)	534
Psp5II	RGGWCCY	1 cut(s)	1362
Psp6I	CCWGG	9 cut(s)	133, 924, 1114, 1354, 1366, 1583, 1776, 2046, 2260
PspGI	CCWGG	9 cut(s)	133, 924, 1114, 1354, 1366, 1583, 1776, 2046, 2260
PspN4I	GGNNCC	4 cut(s)	279, 1364, 1589, 2052
PspPI	GGNCC	7 cut(s)	278, 802, 1118, 1362, 1565, 2264, 2440
PspPPI	RGGWCCY	1 cut(s)	1362
PspXI	VCTCGAGB	1 cut(s)	738
PstNI	CAGNNNCTG	1 cut(s)	896
PsuI	RGATCY	3 cut(s)	2139, 2251, 2275
PvuII	CAGCTG	1 cut(s)	473
RruI	TCGCGA	1 cut(s)	1660
RsaI	GTAC	5 cut(s)	252, 894, 1618, 1639, 2134
RsaNI	GTAC	5 cut(s)	251, 893, 1617, 1638, 2133
RseI	CAYNNNNRTG	4 cut(s)	14, 395, 1333, 2036
SacI	GAGCTC	1 cut(s)	534
SaqAI	TTAA	3 cut(s)	228, 2181, 2285
SatI	GCNGC	6 cut(s)	93, 471, 1226, 1324, 1938, 2247
Sau3AI	GATC	5 cut(s)	204, 1006, 2139, 2251, 2275
Sau96I	GGNCC	7 cut(s)	278, 802, 1118, 1362, 1565, 2264, 2440
SchI	GAGTC	7 cut(s)	369, 531, 606, 686, 959, 1333, 1490
ScrFI	CCNGG	9 cut(s)	135, 926, 1116, 1356, 1368, 1585, 1778, 2048, 2262
SduI	GDGCHC	5 cut(s)	534, 759, 2047, 2166, 2298
SfaNI	GCATC	4 cut(s)	15, 301, 405, 1789
SfcI	CTRYAG	3 cut(s)	166, 1477, 2076
Sfr274I	CTCGAG	1 cut(s)	738
SinI	GGWCC	4 cut(s)	802, 1118, 1362, 2440
SlaI	CTCGAG	1 cut(s)	738
SmiMI	CAYNNNNRTG	4 cut(s)	14, 395, 1333, 2036
SmlI	CTYRAG	4 cut(s)	59, 333, 738, 914
SmoI	CTYRAG	4 cut(s)	59, 333, 738, 914
Sse9I	AATT	8 cut(s)	116, 149, 633, 1026, 1123, 1209, 2146, 2213
SseBI	AGGCCT	2 cut(s)	144, 1450
SsiI	CCGC	6 cut(s)	37, 744, 805, 971, 1324, 2249
SspMI	CTAG	9 cut(s)	282, 818, 965, 1196, 1347, 1446, 1452, 2055, 2402
SstI	GAGCTC	1 cut(s)	534
StuI	AGGCCT	2 cut(s)	144, 1450
StyD4I	CCNGG	9 cut(s)	133, 924, 1114, 1354, 1366, 1583, 1776, 2046, 2260
StyI	CCWWGG	1 cut(s)	139
TaaI	ACNGT	7 cut(s)	170, 376, 448, 663, 710, 814, 2352
TaiI	ACGT	1 cut(s)	2134
TaqI	TCGA	6 cut(s)	122, 309, 363, 739, 1109, 1491
TasI	AATT	8 cut(s)	116, 149, 633, 1026, 1123, 1209, 2146, 2213
TatI	WGTACW	1 cut(s)	250
TauI	GCSGC	1 cut(s)	1326
TfiI	GAWTC	6 cut(s)	130, 996, 1633, 1950, 2394, 2448
Tru1I	TTAA	3 cut(s)	228, 2181, 2285
Tru9I	TTAA	3 cut(s)	228, 2181, 2285
TscAI	CASTG	5 cut(s)	175, 715, 1293, 2234, 2242
TseI	GCWGC	5 cut(s)	92, 470, 1225, 1937, 2246
TspGWI	ACGGA	1 cut(s)	1580
TspRI	CASTG	5 cut(s)	175, 715, 1293, 2234, 2242
Van91I	CCANNNNNTGG	1 cut(s)	683
VneI	GTGCAC	2 cut(s)	2162, 2294
VpaK11BI	GGWCC	4 cut(s)	802, 1118, 1362, 2440
XagI	CCTNNNNNAGG	1 cut(s)	1718
XapI	RAATTY	3 cut(s)	149, 1123, 2213
XceI	RCATGY	1 cut(s)	1090
XhoI	CTCGAG	1 cut(s)	738
XmiI	GTMKAC	1 cut(s)	981
XspI	CTAG	9 cut(s)	282, 818, 965, 1196, 1347, 1446, 1452, 2055, 2402

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.