Cell division cycle-associated protein 7-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g17610 FvH4_5g17610 FvH4_5g17610 |
| prunus_persica | Prupe.5G235800_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr7g0178051 |
| rosa_laevigata | RLG00000005476 |
| rosa_multiflora | Rmu_sc0000425.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00275220 |
| rosa_rugosa | Rorug06G0413000 Rorug06G0413100 |
| rosa_samantha | Rh7AG012300 Rh7BG012200 Rh7CG012200 Rh7DG012500 |
| rosa_wichuraiana | Rw7G000970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 136 |
| Acc36I | ACCTGC | 1 cut(s) | 136 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 539 |
| AccBSI | CCGCTC | 1 cut(s) | 198 |
| AccI | GTMKAC | 2 cut(s) | 174, 756 |
| AciI | CCGC | 8 cut(s) | 163, 196, 243, 312, 395, 486, 510, 659 |
| AclWI | GGATC | 1 cut(s) | 108 |
| AfaI | GTAC | 1 cut(s) | 611 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 446, 539 |
| AgsI | TTSAA | 1 cut(s) | 211 |
| AluBI | AGCT | 6 cut(s) | 17, 109, 122, 181, 379, 811 |
| AluI | AGCT | 6 cut(s) | 17, 109, 122, 181, 379, 811 |
| Alw21I | GWGCWC | 2 cut(s) | 111, 183 |
| Alw26I | GTCTC | 2 cut(s) | 253, 602 |
| AlwI | GGATC | 1 cut(s) | 108 |
| AoxI | GGCC | 4 cut(s) | 10, 332, 396, 418 |
| ApeKI | GCWGC | 1 cut(s) | 749 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 135, 167 |
| AspLEI | GCGC | 2 cut(s) | 195, 346 |
| AspS9I | GGNCC | 4 cut(s) | 10, 397, 418, 526 |
| AsuC2I | CCSGG | 2 cut(s) | 298, 440 |
| AsuHPI | GGTGA | 6 cut(s) | 94, 117, 175, 428, 500, 626 |
| AvaII | GGWCC | 1 cut(s) | 526 |
| BaeGI | GKGCMC | 1 cut(s) | 659 |
| BanII | GRGCYC | 2 cut(s) | 111, 183 |
| Bbv12I | GWGCWC | 2 cut(s) | 111, 183 |
| BbvI | GCAGC | 1 cut(s) | 761 |
| BccI | CCATC | 3 cut(s) | 107, 766, 796 |
| BceAI | ACGGC | 1 cut(s) | 405 |
| BciVI | GTATCC | 1 cut(s) | 770 |
| BcnI | CCSGG | 2 cut(s) | 298, 440 |
| BcoDI | GTCTC | 2 cut(s) | 253, 602 |
| BfaI | CTAG | 2 cut(s) | 570, 818 |
| BfuAI | ACCTGC | 1 cut(s) | 136 |
| BfuI | GTATCC | 1 cut(s) | 770 |
| BisI | GCNGC | 4 cut(s) | 196, 243, 396, 750 |
| BlsI | GCNGC | 4 cut(s) | 197, 244, 397, 751 |
| Bme1390I | CCNGG | 2 cut(s) | 298, 440 |
| Bme18I | GGWCC | 1 cut(s) | 526 |
| BmgT120I | GGNCC | 4 cut(s) | 10, 397, 418, 526 |
| BmiI | GGNNCC | 1 cut(s) | 738 |
| BmrFI | CCNGG | 2 cut(s) | 298, 440 |
| BmrI | ACTGGG | 1 cut(s) | 753 |
| BmsI | GCATC | 2 cut(s) | 497, 819 |
| BmuI | ACTGGG | 1 cut(s) | 753 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 170, 202, 582, 614 |
| BpmI | CTGGAG | 1 cut(s) | 359 |
| BpuEI | CTTGAG | 1 cut(s) | 584 |
| BpuMI | CCSGG | 2 cut(s) | 298, 440 |
| BsaBI | GATNNNNATC | 1 cut(s) | 781 |
| BsaJI | CCNNGG | 1 cut(s) | 421 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 446, 539 |
| Bse1I | ACTGG | 3 cut(s) | 313, 698, 748 |
| Bse3DI | GCAATG | 2 cut(s) | 454, 661 |
| Bse8I | GATNNNNATC | 1 cut(s) | 781 |
| BseDI | CCNNGG | 1 cut(s) | 421 |
| BseGI | GGATG | 3 cut(s) | 361, 657, 811 |
| BseJI | GATNNNNATC | 1 cut(s) | 781 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 446, 539 |
| BseMI | GCAATG | 2 cut(s) | 454, 661 |
| BseMII | CTCAG | 1 cut(s) | 267 |
| BseNI | ACTGG | 3 cut(s) | 313, 698, 748 |
| BseRI | GAGGAG | 1 cut(s) | 343 |
| BseSI | GKGCMC | 1 cut(s) | 659 |
| BseXI | GCAGC | 1 cut(s) | 761 |
| BseYI | CCCAGC | 1 cut(s) | 399 |
| BsgI | GTGCAG | 1 cut(s) | 74 |
| BshFI | GGCC | 4 cut(s) | 12, 334, 398, 420 |
| BsiHKAI | GWGCWC | 2 cut(s) | 111, 183 |
| BsiSI | CCGG | 2 cut(s) | 297, 440 |
| BslFI | GGGAC | 1 cut(s) | 99 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 446, 539 |
| BsmAI | GTCTC | 2 cut(s) | 253, 602 |
| BsmFI | GGGAC | 1 cut(s) | 99 |
| BsnI | GGCC | 4 cut(s) | 12, 334, 398, 420 |
| Bsp1286I | GDGCHC | 3 cut(s) | 111, 183, 659 |
| Bsp143I | GATC | 1 cut(s) | 113 |
| BspACI | CCGC | 8 cut(s) | 163, 196, 243, 312, 395, 486, 510, 659 |
| BspANI | GGCC | 4 cut(s) | 12, 334, 398, 420 |
| BspCNI | CTCAG | 1 cut(s) | 268 |
| BspLI | GGNNCC | 1 cut(s) | 738 |
| BspMI | ACCTGC | 1 cut(s) | 136 |
| BspPI | GGATC | 1 cut(s) | 108 |
| BsrBI | CCGCTC | 1 cut(s) | 198 |
| BsrDI | GCAATG | 2 cut(s) | 454, 661 |
| BsrI | ACTGG | 3 cut(s) | 313, 698, 748 |
| BssECI | CCNNGG | 1 cut(s) | 421 |
| BssMI | GATC | 1 cut(s) | 113 |
| BssNAI | GTATAC | 1 cut(s) | 757 |
| Bst1107I | GTATAC | 1 cut(s) | 757 |
| Bst4CI | ACNGT | 2 cut(s) | 614, 707 |
| Bst6I | CTCTTC | 2 cut(s) | 318, 666 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 507 |
| BstC8I | GCNNGC | 4 cut(s) | 336, 470, 503, 659 |
| BstDEI | CTNAG | 2 cut(s) | 18, 276 |
| BstDSI | CCRYGG | 1 cut(s) | 421 |
| BstF5I | GGATG | 3 cut(s) | 361, 657, 811 |
| BstHHI | GCGC | 2 cut(s) | 195, 346 |
| BstKTI | GATC | 1 cut(s) | 116 |
| BstMAI | GTCTC | 2 cut(s) | 253, 602 |
| BstMBI | GATC | 1 cut(s) | 113 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 128, 204, 242, 465, 507, 663 |
| BstSCI | CCNGG | 2 cut(s) | 296, 438 |
| BstSLI | GKGCMC | 1 cut(s) | 659 |
| BstV1I | GCAGC | 1 cut(s) | 761 |
| BstZ17I | GTATAC | 1 cut(s) | 757 |
| BsuI | GTATCC | 1 cut(s) | 770 |
| BsuRI | GGCC | 4 cut(s) | 12, 334, 398, 420 |
| BtgI | CCRYGG | 1 cut(s) | 421 |
| BtgZI | GCGATG | 1 cut(s) | 520 |
| BtsCI | GGATG | 3 cut(s) | 361, 657, 811 |
| BtsI | GCAGTG | 3 cut(s) | 225, 231, 433 |
| BtsIMutI | CAGTG | 4 cut(s) | 225, 231, 433, 792 |
| BveI | ACCTGC | 1 cut(s) | 136 |
| Cac8I | GCNNGC | 4 cut(s) | 336, 470, 503, 659 |
| CfoI | GCGC | 2 cut(s) | 195, 346 |
| Cfr13I | GGNCC | 4 cut(s) | 10, 397, 418, 526 |
| Csp6I | GTAC | 1 cut(s) | 610 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 403, 438 |
| CviAII | CATG | 2 cut(s) | 149, 534 |
| CviQI | GTAC | 1 cut(s) | 610 |
| DdeI | CTNAG | 2 cut(s) | 18, 276 |
| DpnI | GATC | 1 cut(s) | 115 |
| DpnII | GATC | 1 cut(s) | 113 |
| Eam1104I | CTCTTC | 2 cut(s) | 318, 666 |
| EarI | CTCTTC | 2 cut(s) | 318, 666 |
| EciI | GGCGGA | 1 cut(s) | 327 |
| Ecl136II | GAGCTC | 2 cut(s) | 109, 181 |
| Eco147I | AGGCCT | 1 cut(s) | 334 |
| Eco24I | GRGCYC | 2 cut(s) | 111, 183 |
| Eco47I | GGWCC | 1 cut(s) | 526 |
| Eco53kI | GAGCTC | 2 cut(s) | 109, 181 |
| EcoICRI | GAGCTC | 2 cut(s) | 109, 181 |
| EcoT22I | ATGCAT | 1 cut(s) | 539 |
| EcoT38I | GRGCYC | 2 cut(s) | 111, 183 |
| FaeI | CATG | 2 cut(s) | 152, 537 |
| FaqI | GGGAC | 1 cut(s) | 99 |
| FatI | CATG | 2 cut(s) | 148, 533 |
| FauI | CCCGC | 1 cut(s) | 666 |
| FblI | GTMKAC | 2 cut(s) | 174, 756 |
| Fnu4HI | GCNGC | 4 cut(s) | 196, 243, 396, 750 |
| FokI | GGATG | 3 cut(s) | 368, 664, 818 |
| FriOI | GRGCYC | 2 cut(s) | 111, 183 |
| Fsp4HI | GCNGC | 4 cut(s) | 196, 243, 396, 750 |
| FspBI | CTAG | 2 cut(s) | 570, 818 |
| GlaI | GCGC | 2 cut(s) | 194, 345 |
| GluI | GCNGC | 4 cut(s) | 196, 243, 396, 750 |
| GsaI | CCCAGC | 1 cut(s) | 403 |
| GsuI | CTGGAG | 1 cut(s) | 359 |
| HaeIII | GGCC | 4 cut(s) | 12, 334, 398, 420 |
| HapII | CCGG | 2 cut(s) | 297, 440 |
| HhaI | GCGC | 2 cut(s) | 195, 346 |
| Hin1II | CATG | 2 cut(s) | 152, 537 |
| Hin6I | GCGC | 2 cut(s) | 193, 344 |
| HinP1I | GCGC | 2 cut(s) | 193, 344 |
| HincII | GTYRAC | 1 cut(s) | 75 |
| HindII | GTYRAC | 1 cut(s) | 75 |
| HinfI | GANTC | 2 cut(s) | 389, 451 |
| HpaII | CCGG | 2 cut(s) | 297, 440 |
| HphI | GGTGA | 6 cut(s) | 94, 117, 175, 428, 500, 626 |
| Hpy166II | GTNNAC | 3 cut(s) | 75, 175, 757 |
| Hpy188I | TCNGA | 6 cut(s) | 41, 113, 155, 277, 370, 388 |
| Hpy188III | TCNNGA | 3 cut(s) | 448, 518, 767 |
| Hpy8I | GTNNAC | 3 cut(s) | 75, 175, 757 |
| Hpy99I | CGWCG | 1 cut(s) | 273 |
| HpyAV | CCTTC | 2 cut(s) | 205, 270 |
| HpyCH4III | ACNGT | 2 cut(s) | 614, 707 |
| HpyCH4IV | ACGT | 1 cut(s) | 271 |
| HpyCH4V | TGCA | 8 cut(s) | 91, 131, 338, 408, 468, 501, 537, 666 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 128, 204, 242, 465, 507, 663 |
| HpyF3I | CTNAG | 2 cut(s) | 18, 276 |
| HpySE526I | ACGT | 1 cut(s) | 271 |
| Hsp92II | CATG | 2 cut(s) | 152, 537 |
| HspAI | GCGC | 2 cut(s) | 193, 344 |
| Kzo9I | GATC | 1 cut(s) | 113 |
| LmnI | GCTCC | 2 cut(s) | 114, 742 |
| Lsp1109I | GCAGC | 1 cut(s) | 761 |
| LweI | GCATC | 2 cut(s) | 497, 819 |
| MaeI | CTAG | 2 cut(s) | 570, 818 |
| MaeII | ACGT | 1 cut(s) | 271 |
| MaeIII | GTNAC | 2 cut(s) | 23, 701 |
| MalI | GATC | 1 cut(s) | 115 |
| MbiI | CCGCTC | 1 cut(s) | 198 |
| MboI | GATC | 1 cut(s) | 113 |
| MboII | GAAGA | 6 cut(s) | 335, 375, 503, 506, 629, 683 |
| MhlI | GDGCHC | 3 cut(s) | 111, 183, 659 |
| MluCI | AATT | 1 cut(s) | 620 |
| MlyI | GAGTC | 1 cut(s) | 398 |
| MmeI | TCCRAC | 1 cut(s) | 764 |
| MnlI | CCTC | 8 cut(s) | 196, 273, 281, 321, 324, 569, 584, 619 |
| Mph1103I | ATGCAT | 1 cut(s) | 539 |
| MseI | TTAA | 3 cut(s) | 284, 305, 813 |
| MspA1I | CMGCKG | 1 cut(s) | 245 |
| MspI | CCGG | 2 cut(s) | 297, 440 |
| MspR9I | CCNGG | 2 cut(s) | 298, 440 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 128, 204, 242, 465, 507, 663 |
| NciI | CCSGG | 2 cut(s) | 298, 440 |
| NdeII | GATC | 1 cut(s) | 113 |
| NlaIII | CATG | 2 cut(s) | 152, 537 |
| NlaIV | GGNNCC | 1 cut(s) | 738 |
| NmuCI | GTSAC | 1 cut(s) | 23 |
| NsiI | ATGCAT | 1 cut(s) | 539 |
| PaqCI | CACCTGC | 1 cut(s) | 136 |
| PceI | AGGCCT | 1 cut(s) | 334 |
| PfeI | GAWTC | 1 cut(s) | 451 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 539 |
| PfoI | TCCNGGA | 1 cut(s) | 296 |
| PkrI | GCNGC | 4 cut(s) | 197, 244, 397, 751 |
| PleI | GAGTC | 1 cut(s) | 397 |
| PpsI | GAGTC | 1 cut(s) | 397 |
| Psp124BI | GAGCTC | 2 cut(s) | 111, 183 |
| PspFI | CCCAGC | 1 cut(s) | 399 |
| PspN4I | GGNNCC | 1 cut(s) | 738 |
| PspPI | GGNCC | 4 cut(s) | 10, 397, 418, 526 |
| RsaI | GTAC | 1 cut(s) | 611 |
| RsaNI | GTAC | 1 cut(s) | 610 |
| SacI | GAGCTC | 2 cut(s) | 111, 183 |
| SaqAI | TTAA | 3 cut(s) | 284, 305, 813 |
| SatI | GCNGC | 4 cut(s) | 196, 243, 396, 750 |
| Sau3AI | GATC | 1 cut(s) | 113 |
| Sau96I | GGNCC | 4 cut(s) | 10, 397, 418, 526 |
| SchI | GAGTC | 1 cut(s) | 398 |
| ScrFI | CCNGG | 2 cut(s) | 298, 440 |
| SduI | GDGCHC | 3 cut(s) | 111, 183, 659 |
| SfaNI | GCATC | 2 cut(s) | 497, 819 |
| SinI | GGWCC | 1 cut(s) | 526 |
| SmlI | CTYRAG | 1 cut(s) | 599 |
| SmoI | CTYRAG | 1 cut(s) | 599 |
| Sse9I | AATT | 1 cut(s) | 620 |
| SseBI | AGGCCT | 1 cut(s) | 334 |
| SsiI | CCGC | 8 cut(s) | 163, 196, 243, 312, 395, 486, 510, 659 |
| SspI | AATATT | 1 cut(s) | 54 |
| SspMI | CTAG | 2 cut(s) | 570, 818 |
| SstI | GAGCTC | 2 cut(s) | 111, 183 |
| StuI | AGGCCT | 1 cut(s) | 334 |
| StyD4I | CCNGG | 2 cut(s) | 296, 438 |
| TaaI | ACNGT | 2 cut(s) | 614, 707 |
| TaiI | ACGT | 1 cut(s) | 274 |
| TaqI | TCGA | 4 cut(s) | 49, 268, 589, 710 |
| TasI | AATT | 1 cut(s) | 620 |
| TauI | GCSGC | 3 cut(s) | 198, 245, 398 |
| TfiI | GAWTC | 1 cut(s) | 451 |
| Tru1I | TTAA | 3 cut(s) | 284, 305, 813 |
| Tru9I | TTAA | 3 cut(s) | 284, 305, 813 |
| TscAI | CASTG | 4 cut(s) | 232, 238, 433, 792 |
| TseFI | GTSAC | 1 cut(s) | 23 |
| TseI | GCWGC | 1 cut(s) | 749 |
| Tsp45I | GTSAC | 1 cut(s) | 23 |
| TspDTI | ATGAA | 3 cut(s) | 45, 252, 443 |
| TspGWI | ACGGA | 1 cut(s) | 563 |
| TspRI | CASTG | 4 cut(s) | 232, 238, 433, 792 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 539 |
| VpaK11BI | GGWCC | 1 cut(s) | 526 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 536 |
| XmiI | GTMKAC | 2 cut(s) | 174, 756 |
| XspI | CTAG | 2 cut(s) | 570, 818 |
| Zsp2I | ATGCAT | 1 cut(s) | 539 |