Rorug06G0413000

Cell division cycle-associated protein 7-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000239
Physical Location & Seq
Reverse (-)
55416336 .. 55420919
4584 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0413000.1

Sequence Viewer

Length: 2133 bp
ATGGCGGTAGCTGCAGCTCGGTTTGGTCGCCAAGCGAAACGCCCGTATTGGGGTTTCTGTATAAAGATGACAGCGGTGGCCGTTATGGGTCTCTGCTTTATATTTGTGTGGACTATGTTTACGTCTCCTTCGAATTCAGTGAGTACAAGAATAGAGAGCTTTGACAATATAGAGCAGCCTCCTGGATCAAGGAGCAAAAGGGTGAGCAGTTCTGAGAGGAAGGTGAATGGGACGTCTGTTGCTTTGGGTGGTGGTCATGAGGTTAAATCTGAGGAGAGGGAGAAGAAGGAAGTGGCGAATACGAAAAAGGAGAGAGTTAAGAAGAAGTTACCAGAGAAGGTGTCGAAAGAGAAACAATTGGGGAGTAAGGAAAAGGAGAAGGAGAAGGAAGATGAAGAGCCAGAAGTGGTGGATGGAAAGGAAGAAGGTTTGGATGGTGAAGATGAAGGTGAAGGTGAAGGAAATGGGAATGCGGAAGGAGAGGGTGATTTGATTCAAGGGGTGGATCAGGAATTTGAGGAGAAGTTGGAAGATGATGGCGGTGAATCGGAGAAGAGGGGAAAGAAGAGAAATAAGATTAAGGGTCTGGTGTTTGATCCGAAAGCACATTATCATTGGAAATCATGTAGCACAAGGAGCAAGCACAATTACATTCCTTGTATTGATATAGAAGTTGTCTCTGGAAGGCTGCAGCAATATAGGCACACAGAGAGGAGTTGTCCACCATCACCGCCAATGTGTCTTGTGCCTCTTCCTCCAGATGGGTATGATCCTCCAGTCCATTGGCCCGAGAGTAAAGAGAAGATATTGTATAAGAACGTGGAGCATCCAAAGCTTGCTGCATTCGTCAAGGAACATACTTGGGTGATGGAGTCTGGTGAATACCTTACTTTTCCTCAAAACCAGTCTGAGATTAAGGGTGGGGTTCTTCACTATCTTGAGTCCATTGAAGAGATGGTACCAGATCTAGAATGGGGAAAGAATATCCGTGTAGTGCTGGATATCGGATGTACAGATTCCGCTTTTGGGGCTTCTCTCCTTGATAAGGATGTATTAACATTATCATTGGGGTTGAAAGATGACCTAGTTGACCTAGCTCAAGTTTCCCTCGAGCGTGGTTTTCCTACTGTAGTTAGCCCATTCGGAAACAGAAGGCTAGCTTTCCCTAGTGGTGTTTTTGATGTTATTCACTGCAGCGGGTGCACTGTACCTTGGCATTCAAATGGGGGTAAGCATCTTCTAGAGATGAATAGGATTTTAAGGCCCGGGGGATACTTTATCTTGTCAACTAAACATGACAGCTTTGAAGCTGAAGAAGCCGTGAATACATTGATGGTATCTATCTGCTGGAATATTTTGGCTCATAAAACTGATGAAGTCAGTGATGTGGGTGTCAAAATATATAAGAAGCCGGACTCAAATGATTTATATACGATGAGGAGGAAGAAACATTGGATACCTTTATGCAAGGGAAATGATAACCCAGATGCAGCCTGGTATGTCCCGGTGACGACTTGTTTGCACACCATTCCATCTGGTATTGAAGAGCGTGGATCAGAGTGGCCGGAGGAATGGCCCAACAGGCTCGAAAGATATCCGGACTGGTTGAACGATAAAGATAAGTTGATTGCAGACACCAAGCACTGGAAAGATATTGTTGACAAATCCTATCTTATTGGACTTGGTATTGACTGGTCAAGCATTCGAAATGTAATGGACATGAAAGCCATCTATGGAGGATTTGCTGCAGCCCTCTTGCAACAAAAGGTTTGGGTGATGAATGTGGTCCCTGTCCATGCACCTGATACGCTTCCTTTCATTTTTGAGCGTGGGCTTGTTGGAACCTACCACGACTGGTGTGAGTCTTTCGGTACTTATCCAAGATCATATGATCTTTTGCATGCTGATCATCTGTTTTCACGGCTCAAGAACAGGTGTAAGCAGCCTGCATCAATTGTTGTTGAGATGGATCGTATTTTACGGCCAGGAGGTTGGGCCATCATACGTGACAAAGTTGAGATTCTAGATCCGTTGGAGGGAATACTCAAGAGTTTGCATTGGGATATAAGAATGACTTATGCTCAACAAAAAGAGGGTATTCTCTGTGCACAGAAAACTACATGGCGCCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-4CXXC_R1

Protein Analysis

710

Amino Acids

80.49

Weight (kDa)

6.05

Isoelectric Point (pI)

46.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_29 PF03141 216 - 705 5.2e-185 Putative S-adenosyl-L-methionine-dependent methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000239)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g12320 FvH4_7g28340 FvH4_7g28350 FvH4_7g28350 FvH4_7g28361 FvH4_7g28450 FvH4_7g28450 FvH4_7g28452 FvH4_7g28453 FvH4_7g28453 FvH4_7g28454 FvH4_7g28455 FvH4_7g28458
malus_domestica MD01G1188000.v1.1 MD01G1188200.v1.1 MD02G1199800.v1.1 MD07G1191000.v1.1 MD11G1075700.v1.1 MD12G1092600.v1.1
prunus_persica Prupe.2G148800_v2.0.a1 Prupe.2G284500_v2.0.a1 Prupe.2G284800_v2.0.a1 Prupe.2G285200_v2.0.a1 Prupe.2G285200_v2.0.a1 Prupe.2G285200_v2.0.a1 Prupe.2G285200_v2.0.a1
pyrus_communis pycom02g16380 pycom11g06340
rosa_chinensis RchiOBHm_Chr1g0351121 RchiOBHm_Chr1g0359881 RchiOBHm_Chr1g0359951 RchiOBHm_Chr1g0375301 RchiOBHm_Chr1g0375441 RchiOBHm_Chr1g0375471 RchiOBHm_Chr1g0375491 RchiOBHm_Chr1g0375521 RchiOBHm_Chr1g0375531 RchiOBHm_Chr1g0375571 RchiOBHm_Chr1g0375641 RchiOBHm_Chr1g0375681 RchiOBHm_Chr1g0375701 RchiOBHm_Chr1g0375721 RchiOBHm_Chr1g0375751 RchiOBHm_Chr1g0375811 RchiOBHm_Chr1g0375831 RchiOBHm_Chr2g0116601 RchiOBHm_Chr2g0143131
rosa_laevigata RLG00000018292 RLG00000026650 RLG00000026653 RLG00000026655 RLG00000026657 RLG00000026659 RLG00000026660 RLG00000026662 RLG00000026670 RLG00000027846 RLG00000028430
rosa_multiflora Rmu_co8068694.1_g000001 Rmu_co8138120.1_g000001 Rmu_co8293475.1_g000001 Rmu_sc0000487.1_g000028 Rmu_sc0000487.1_g000030 Rmu_sc0000487.1_g000031 Rmu_sc0000487.1_g000051 Rmu_sc0000554.1_g000038 Rmu_sc0001619.1_g000015 Rmu_sc0001644.1_g000001 Rmu_sc0001644.1_g000009 Rmu_sc0001644.1_g000012 Rmu_sc0001644.1_g000013 Rmu_sc0001644.1_g000020 Rmu_sc0001644.1_g000023 Rmu_sc0001644.1_g000031 Rmu_sc0001943.1_g000001 Rmu_sc0001943.1_g000005 Rmu_sc0006087.1_g000005 Rmu_sc0008800.1_g000004 Rmu_sc0015155.1_g000001 Rmu_ssc0000106.1_g000005 Rmu_ssc0000368.1_g000003
rosa_roxburghii Rroxscaffold_2G00102100 Rroxscaffold_2G00127030 Rroxscaffold_4G00282580 Rroxscaffold_4G00282620 Rroxscaffold_4G00282650 Rroxscaffold_4G00282670 Rroxscaffold_4G00282740 Rroxscaffold_4G00282840 Rroxscaffold_4G00304050
rosa_rugosa Rorug01G0216600 Rorug01G0273300 Rorug01G0273400 Rorug01G0390900 Rorug01G0391000 Rorug01G0391400 Rorug01G0391500 Rorug01G0391600 Rorug01G0391700 Rorug01G0391800 Rorug02G0061300 Rorug02G0207800 Rorug02G0378000 Rorug02G0378100 Rorug02G0378200 Rorug02G0378300 Rorug02G0378300 Rorug02G0378300 Rorug03G0168600 Rorug06G0412800 Rorug06G0412900 Rorug06G0413000
rosa_samantha Rh1AG231000 Rh1AG287500 Rh1AG402800 Rh1CG379000 Rh2BG440100 Rh2CG417400 Rh2DG271100
rosa_wichuraiana Rw0G023590 Rw0G023600 Rw1G020080 Rw1G025530 Rw1G025540 Rw1G035580 Rw1G035650 Rw1G035670 Rw1G035690 Rw1G035700 Rw1G035740 Rw1G035760 Rw1G035780 Rw1G035800 Rw2G020700 Rw2G035250 Rw4G005840 Rw4G005850 Rw4G005860 Rw4G005890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 236
Acc65I GGTACC 1 cut(s) 958
AccB1I GGYRCC 2 cut(s) 958, 2124
AccB7I CCANNNNNTGG 1 cut(s) 1644
AccIII TCCGGA 1 cut(s) 1597
AciI CCGC 7 cut(s) 5, 74, 473, 540, 731, 1020, 1197
AclWI GGATC 7 cut(s) 193, 513, 590, 764, 1561, 1977, 2021
AcoI YGGCCR 3 cut(s) 78, 1562, 1982
AcsI RAATTY 2 cut(s) 133, 512
AcuI CTGAAG 1 cut(s) 1332
AcyI GRCGYC 2 cut(s) 233, 2125
AfaI GTAC 5 cut(s) 145, 960, 1012, 1209, 1873
AfiI CCNNNNNNNGG 7 cut(s) 49, 50, 761, 1026, 1045, 1644, 2036
AgsI TTSAA 7 cut(s) 497, 950, 1075, 1221, 1307, 1544, 1609
AjnI CCWGG 3 cut(s) 181, 1493, 1984
AluBI AGCT 8 cut(s) 11, 17, 159, 835, 1097, 1160, 1302, 1310
AluI AGCT 8 cut(s) 11, 17, 159, 835, 1097, 1160, 1302, 1310
Alw21I GWGCWC 2 cut(s) 1205, 2110
Alw26I GTCTC 3 cut(s) 95, 129, 682
Alw44I GTGCAC 2 cut(s) 1201, 2106
AlwI GGATC 7 cut(s) 193, 513, 590, 764, 1561, 1977, 2021
Ama87I CYCGRG 3 cut(s) 788, 1109, 1265
Aor13HI TCCGGA 1 cut(s) 1597
AoxI GGCC 7 cut(s) 78, 785, 1262, 1562, 1574, 1982, 1995
ApaLI GTGCAC 2 cut(s) 1201, 2106
ApoI RAATTY 2 cut(s) 133, 512
ArsI GACNNNNNNTTYG 2 cut(s) 1501, 1533
Asp718I GGTACC 1 cut(s) 958
AspLEI GCGC 1 cut(s) 2127
AspS9I GGNCC 5 cut(s) 786, 1263, 1575, 1786, 1995
AsuC2I CCSGG 3 cut(s) 1266, 1267, 1505
AsuII TTCGAA 2 cut(s) 131, 1705
AsuNHI GCTAGC 1 cut(s) 1156
AvaI CYCGRG 3 cut(s) 788, 1109, 1265
AvaII GGWCC 1 cut(s) 1786
BaeGI GKGCMC 2 cut(s) 1205, 2110
BanI GGYRCC 2 cut(s) 958, 2124
BarI GAAGNNNNNNTAC 2 cut(s) 942, 974
Bbv12I GWGCWC 2 cut(s) 1205, 2110
BceAI ACGGC 4 cut(s) 65, 1304, 1937, 1997
BcgI CGANNNNNNTGC 2 cut(s) 1501, 1535
BciT130I CCWGG 3 cut(s) 183, 1495, 1986
BciVI GTATCC 2 cut(s) 1265, 1449
BclI TGATCA 1 cut(s) 1906
BcnI CCSGG 3 cut(s) 1266, 1267, 1505
BcoDI GTCTC 3 cut(s) 95, 129, 682
BfaI CTAG 7 cut(s) 968, 1085, 1094, 1157, 1167, 1241, 2024
BfmI CTRYAG 5 cut(s) 12, 689, 1128, 1192, 1746
BfoI RGCGCY 1 cut(s) 2128
BfuI GTATCC 2 cut(s) 1265, 1449
BglI GCCNNNNNGGC 1 cut(s) 1582
BglII AGATCT 1 cut(s) 964
Bme1390I CCNGG 6 cut(s) 183, 1266, 1267, 1495, 1505, 1986
Bme18I GGWCC 1 cut(s) 1786
BmeT110I CYCGRG 3 cut(s) 788, 1109, 1265
BmgT120I GGNCC 5 cut(s) 786, 1263, 1575, 1786, 1995
BmiI GGNNCC 4 cut(s) 960, 1788, 1843, 2126
BmrFI CCNGG 6 cut(s) 183, 1266, 1267, 1495, 1505, 1986
BmsI GCATC 4 cut(s) 835, 1243, 1477, 1958
BmtI GCTAGC 1 cut(s) 1160
BpmI CTGGAG 2 cut(s) 741, 759
Bpu14I TTCGAA 2 cut(s) 131, 1705
BpuEI CTTGAG 4 cut(s) 959, 1083, 1910, 2030
BpuMI CCSGG 3 cut(s) 1266, 1267, 1505
BsaAI YACGTR 1 cut(s) 2006
BsaHI GRCGYC 2 cut(s) 233, 2125
BsaI GGTCTC 1 cut(s) 95
BsaJI CCNNGG 3 cut(s) 1211, 1265, 1266
BsaWI WCCGGW 1 cut(s) 1597
Bsc4I CCNNNNNNNGG 7 cut(s) 49, 50, 761, 1026, 1045, 1644, 2036
Bse1I ACTGG 6 cut(s) 776, 904, 1607, 1649, 1697, 1859
BseAI TCCGGA 1 cut(s) 1597
BseBI CCWGG 3 cut(s) 183, 1495, 1986
BseDI CCNNGG 3 cut(s) 1211, 1265, 1266
BseGI GGATG 5 cut(s) 418, 439, 826, 1013, 1054
BseLI CCNNNNNNNGG 7 cut(s) 49, 50, 761, 1026, 1045, 1644, 2036
BseMII CTCAG 3 cut(s) 204, 261, 900
BseNI ACTGG 6 cut(s) 776, 904, 1607, 1649, 1697, 1859
BseRI GAGGAG 4 cut(s) 287, 533, 727, 1453
BseSI GKGCMC 2 cut(s) 1205, 2110
BshFI GGCC 7 cut(s) 80, 787, 1264, 1564, 1576, 1984, 1997
BshNI GGYRCC 2 cut(s) 958, 2124
BsiHKAI GWGCWC 2 cut(s) 1205, 2110
BsiHKCI CYCGRG 3 cut(s) 788, 1109, 1265
BsiSI CCGG 5 cut(s) 1266, 1412, 1505, 1565, 1598
BslFI GGGAC 3 cut(s) 244, 1487, 1772
BslI CCNNNNNNNGG 7 cut(s) 49, 50, 761, 1026, 1045, 1644, 2036
BsmAI GTCTC 3 cut(s) 95, 129, 682
BsmBI CGTCTC 1 cut(s) 129
BsmFI GGGAC 3 cut(s) 244, 1487, 1772
BsmI GAATGC 4 cut(s) 475, 842, 1216, 1701
BsnI GGCC 7 cut(s) 80, 787, 1264, 1564, 1576, 1984, 1997
Bso31I GGTCTC 1 cut(s) 95
BsoBI CYCGRG 3 cut(s) 788, 1109, 1265
Bsp119I TTCGAA 2 cut(s) 131, 1705
Bsp1286I GDGCHC 2 cut(s) 1205, 2110
Bsp13I TCCGGA 1 cut(s) 1597
Bsp1407I TGTACA 1 cut(s) 1010
BspACI CCGC 7 cut(s) 5, 74, 473, 540, 731, 1020, 1197
BspANI GGCC 7 cut(s) 80, 787, 1264, 1564, 1576, 1984, 1997
BspCNI CTCAG 3 cut(s) 205, 262, 901
BspEI TCCGGA 1 cut(s) 1597
BspHI TCATGA 1 cut(s) 256
BspLI GGNNCC 4 cut(s) 960, 1788, 1843, 2126
BspMAI CTGCAG 4 cut(s) 16, 693, 1196, 1750
BspOI GCTAGC 1 cut(s) 1160
BspPI GGATC 7 cut(s) 193, 513, 590, 764, 1561, 1977, 2021
BspQI GCTCTTC 2 cut(s) 390, 1539
BspT104I TTCGAA 2 cut(s) 131, 1705
BspT107I GGYRCC 2 cut(s) 958, 2124
BspTNI GGTCTC 1 cut(s) 95
BsrGI TGTACA 1 cut(s) 1010
BsrI ACTGG 6 cut(s) 776, 904, 1607, 1649, 1697, 1859
BssECI CCNNGG 3 cut(s) 1211, 1265, 1266
BssNI GRCGYC 2 cut(s) 233, 2125
BssT1I CCWWGG 1 cut(s) 1211
Bst2UI CCWGG 3 cut(s) 183, 1495, 1986
Bst4CI ACNGT 2 cut(s) 1129, 1207
Bst6I CTCTTC 6 cut(s) 390, 548, 560, 756, 945, 1539
BstACI GRCGYC 2 cut(s) 233, 2125
BstAPI GCANNNNNTGC 1 cut(s) 1200
BstAUI TGTACA 1 cut(s) 1010
BstBAI YACGTR 1 cut(s) 2006
BstBI TTCGAA 2 cut(s) 131, 1705
BstC8I GCNNGC 5 cut(s) 641, 837, 1158, 1902, 1947
BstDEI CTNAG 3 cut(s) 213, 270, 909
BstENI CCTNNNNNAGG 1 cut(s) 1043
BstF5I GGATG 5 cut(s) 418, 439, 826, 1013, 1054
BstH2I RGCGCY 1 cut(s) 2128
BstHHI GCGC 1 cut(s) 2127
BstMAI GTCTC 3 cut(s) 95, 129, 682
BstMWI GCNNNNNNNGC 8 cut(s) 11, 636, 700, 832, 1028, 1200, 1316, 1582
BstNI CCWGG 3 cut(s) 183, 1495, 1986
BstNSI RCATGY 1 cut(s) 1904
BstSCI CCNGG 6 cut(s) 181, 1264, 1265, 1493, 1503, 1984
BstSFI CTRYAG 5 cut(s) 12, 689, 1128, 1192, 1746
BstSLI GKGCMC 2 cut(s) 1205, 2110
BstX2I RGATCY 2 cut(s) 964, 2026
BstXI CCANNNNNNTGG 2 cut(s) 783, 1992
BstYI RGATCY 2 cut(s) 964, 2026
BsuI GTATCC 2 cut(s) 1265, 1449
BsuRI GGCC 7 cut(s) 80, 787, 1264, 1564, 1576, 1984, 1997
BtsCI GGATG 5 cut(s) 418, 439, 826, 1013, 1054
BtsI GCAGTG 1 cut(s) 1189
BtsIMutI CAGTG 5 cut(s) 144, 1189, 1203, 1387, 1642
Cac8I GCNNGC 5 cut(s) 641, 837, 1158, 1902, 1947
CciI TCATGA 1 cut(s) 256
CfoI GCGC 1 cut(s) 2127
Cfr13I GGNCC 5 cut(s) 786, 1263, 1575, 1786, 1995
Cfr9I CCCGGG 1 cut(s) 1265
Csp6I GTAC 5 cut(s) 144, 959, 1011, 1208, 1872
CviAII CATG 7 cut(s) 257, 624, 1295, 1720, 1796, 1901, 2121
CviQI GTAC 5 cut(s) 144, 959, 1011, 1208, 1872
DdeI CTNAG 3 cut(s) 213, 270, 909
DinI GGCGCC 1 cut(s) 2126
EaeI YGGCCR 3 cut(s) 78, 1562, 1982
Eam1104I CTCTTC 6 cut(s) 390, 548, 560, 756, 945, 1539
EarI CTCTTC 6 cut(s) 390, 548, 560, 756, 945, 1539
Eco130I CCWWGG 1 cut(s) 1211
Eco31I GGTCTC 1 cut(s) 95
Eco32I GATATC 2 cut(s) 1003, 1595
Eco47I GGWCC 1 cut(s) 1786
Eco57I CTGAAG 1 cut(s) 1332
Eco88I CYCGRG 3 cut(s) 788, 1109, 1265
EcoNI CCTNNNNNAGG 1 cut(s) 1043
EcoRI GAATTC 1 cut(s) 133
EcoRII CCWGG 3 cut(s) 181, 1493, 1984
EcoRV GATATC 2 cut(s) 1003, 1595
EcoT14I CCWWGG 1 cut(s) 1211
EgeI GGCGCC 1 cut(s) 2126
EheI GGCGCC 1 cut(s) 2126
ErhI CCWWGG 1 cut(s) 1211
Esp3I CGTCTC 1 cut(s) 129
FaeI CATG 7 cut(s) 260, 627, 1298, 1723, 1799, 1904, 2124
FalI AAGNNNNNCTT 4 cut(s) 1144, 1176, 2059, 2091
FaqI GGGAC 3 cut(s) 244, 1487, 1772
FatI CATG 7 cut(s) 256, 623, 1294, 1719, 1795, 1900, 2120
FauI CCCGC 1 cut(s) 1190
FauNDI CATATG 1 cut(s) 1888
FbaI TGATCA 1 cut(s) 1906
FokI GGATG 5 cut(s) 425, 446, 813, 1020, 1061
FspBI CTAG 7 cut(s) 968, 1085, 1094, 1157, 1167, 1241, 2024
GlaI GCGC 1 cut(s) 2126
GsuI CTGGAG 2 cut(s) 741, 759
HaeII RGCGCY 1 cut(s) 2128
HaeIII GGCC 7 cut(s) 80, 787, 1264, 1564, 1576, 1984, 1997
HapII CCGG 5 cut(s) 1266, 1412, 1505, 1565, 1598
HhaI GCGC 1 cut(s) 2127
Hin1I GRCGYC 2 cut(s) 233, 2125
Hin1II CATG 7 cut(s) 260, 627, 1298, 1723, 1799, 1904, 2124
Hin6I GCGC 1 cut(s) 2125
HinP1I GCGC 1 cut(s) 2125
HincII GTYRAC 3 cut(s) 1090, 1287, 1660
HindII GTYRAC 3 cut(s) 1090, 1287, 1660
HindIII AAGCTT 1 cut(s) 833
HinfI GANTC 8 cut(s) 493, 545, 872, 941, 1016, 1415, 1862, 2020
HpaII CCGG 5 cut(s) 1266, 1412, 1505, 1565, 1598
Hpy166II GTNNAC 8 cut(s) 111, 120, 722, 1090, 1203, 1287, 1660, 2108
Hpy188I TCNGA 8 cut(s) 214, 271, 550, 600, 910, 1007, 1145, 1558
Hpy8I GTNNAC 8 cut(s) 111, 120, 722, 1090, 1203, 1287, 1660, 2108
HpyCH4III ACNGT 2 cut(s) 1129, 1207
HpyCH4IV ACGT 4 cut(s) 122, 233, 819, 2005
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 636, 700, 832, 1028, 1200, 1316, 1582
HpyF3I CTNAG 3 cut(s) 213, 270, 909
HpySE526I ACGT 4 cut(s) 122, 233, 819, 2005
Hsp92I GRCGYC 2 cut(s) 233, 2125
Hsp92II CATG 7 cut(s) 260, 627, 1298, 1723, 1799, 1904, 2124
HspAI GCGC 1 cut(s) 2125
KasI GGCGCC 1 cut(s) 2124
Kpn2I TCCGGA 1 cut(s) 1597
KpnI GGTACC 1 cut(s) 962
Ksp22I TGATCA 1 cut(s) 1906
LguI GCTCTTC 2 cut(s) 390, 1539
LmnI GCTCC 3 cut(s) 192, 636, 823
LweI GCATC 4 cut(s) 835, 1243, 1477, 1958
MaeI CTAG 7 cut(s) 968, 1085, 1094, 1157, 1167, 1241, 2024
MaeII ACGT 4 cut(s) 122, 233, 819, 2005
MaeIII GTNAC 3 cut(s) 327, 1507, 2006
MfeI CAATTG 2 cut(s) 356, 1953
MflI RGATCY 2 cut(s) 964, 2026
MhlI GDGCHC 2 cut(s) 1205, 2110
MluCI AATT 5 cut(s) 133, 356, 512, 646, 1953
Mly113I GGCGCC 1 cut(s) 2125
MlyI GAGTC 4 cut(s) 881, 950, 1409, 1871
MmeI TCCRAC 3 cut(s) 507, 1819, 2013
MroI TCCGGA 1 cut(s) 1597
MseI TTAA 6 cut(s) 264, 318, 579, 915, 1055, 1259
MslI CAYNNNNRTG 1 cut(s) 1221
MspA1I CMGCKG 2 cut(s) 74, 1197
MspI CCGG 5 cut(s) 1266, 1412, 1505, 1565, 1598
MspR9I CCNGG 6 cut(s) 183, 1266, 1267, 1495, 1505, 1986
MunI CAATTG 2 cut(s) 356, 1953
Mva1269I GAATGC 4 cut(s) 475, 842, 1216, 1701
MvaI CCWGG 3 cut(s) 183, 1495, 1986
MwoI GCNNNNNNNGC 8 cut(s) 11, 636, 700, 832, 1028, 1200, 1316, 1582
NarI GGCGCC 1 cut(s) 2125
NciI CCSGG 3 cut(s) 1266, 1267, 1505
NdeI CATATG 1 cut(s) 1888
NheI GCTAGC 1 cut(s) 1156
NlaIII CATG 7 cut(s) 260, 627, 1298, 1723, 1799, 1904, 2124
NlaIV GGNNCC 4 cut(s) 960, 1788, 1843, 2126
NmuCI GTSAC 2 cut(s) 1507, 2006
NspI RCATGY 1 cut(s) 1904
NspV TTCGAA 2 cut(s) 131, 1705
PaeI GCATGC 1 cut(s) 1904
PaeR7I CTCGAG 1 cut(s) 1109
PagI TCATGA 1 cut(s) 256
PciSI GCTCTTC 2 cut(s) 390, 1539
PcsI WCGNNNNNNNCGW 1 cut(s) 128
PctI GAATGC 4 cut(s) 475, 842, 1216, 1701
PfeI GAWTC 4 cut(s) 493, 545, 1016, 2020
PflMI CCANNNNNTGG 1 cut(s) 1644
PfoI TCCNGGA 1 cut(s) 181
PleI GAGTC 4 cut(s) 880, 949, 1409, 1870
PluTI GGCGCC 1 cut(s) 2128
PpsI GAGTC 4 cut(s) 880, 949, 1409, 1870
Ppu21I YACGTR 1 cut(s) 2006
Psp6I CCWGG 3 cut(s) 181, 1493, 1984
PspGI CCWGG 3 cut(s) 181, 1493, 1984
PspN4I GGNNCC 4 cut(s) 960, 1788, 1843, 2126
PspPI GGNCC 5 cut(s) 786, 1263, 1575, 1786, 1995
PspXI VCTCGAGB 1 cut(s) 1109
PstI CTGCAG 4 cut(s) 16, 693, 1196, 1750
PsuI RGATCY 2 cut(s) 964, 2026
RsaI GTAC 5 cut(s) 145, 960, 1012, 1209, 1873
RsaNI GTAC 5 cut(s) 144, 959, 1011, 1208, 1872
RseI CAYNNNNRTG 1 cut(s) 1221
SapI GCTCTTC 2 cut(s) 390, 1539
SaqAI TTAA 6 cut(s) 264, 318, 579, 915, 1055, 1259
Sau96I GGNCC 5 cut(s) 786, 1263, 1575, 1786, 1995
SchI GAGTC 4 cut(s) 881, 950, 1409, 1871
ScrFI CCNGG 6 cut(s) 183, 1266, 1267, 1495, 1505, 1986
SduI GDGCHC 2 cut(s) 1205, 2110
SfaNI GCATC 4 cut(s) 835, 1243, 1477, 1958
SfcI CTRYAG 5 cut(s) 12, 689, 1128, 1192, 1746
SfoI GGCGCC 1 cut(s) 2126
Sfr274I CTCGAG 1 cut(s) 1109
SfuI TTCGAA 2 cut(s) 131, 1705
SinI GGWCC 1 cut(s) 1786
SlaI CTCGAG 1 cut(s) 1109
SmaI CCCGGG 1 cut(s) 1267
SmiMI CAYNNNNRTG 1 cut(s) 1221
SmlI CTYRAG 5 cut(s) 938, 1098, 1109, 1925, 2045
SmoI CTYRAG 5 cut(s) 938, 1098, 1109, 1925, 2045
SphI GCATGC 1 cut(s) 1904
Sse9I AATT 5 cut(s) 133, 356, 512, 646, 1953
SsiI CCGC 7 cut(s) 5, 74, 473, 540, 731, 1020, 1197
SspDI GGCGCC 1 cut(s) 2124
SspI AATATT 1 cut(s) 1354
SspMI CTAG 7 cut(s) 968, 1085, 1094, 1157, 1167, 1241, 2024
StyD4I CCNGG 6 cut(s) 181, 1264, 1265, 1493, 1503, 1984
StyI CCWWGG 1 cut(s) 1211
TaaI ACNGT 2 cut(s) 1129, 1207
TaiI ACGT 4 cut(s) 125, 236, 822, 2008
TaqI TCGA 5 cut(s) 131, 344, 1110, 1587, 1705
TasI AATT 5 cut(s) 133, 356, 512, 646, 1953
TatI WGTACW 2 cut(s) 143, 1010
TfiI GAWTC 4 cut(s) 493, 545, 1016, 2020
Tru1I TTAA 6 cut(s) 264, 318, 579, 915, 1055, 1259
Tru9I TTAA 6 cut(s) 264, 318, 579, 915, 1055, 1259
TscAI CASTG 5 cut(s) 144, 1196, 1210, 1387, 1649
TseFI GTSAC 2 cut(s) 1507, 2006
Tsp45I GTSAC 2 cut(s) 1507, 2006
TspDTI ATGAA 7 cut(s) 408, 459, 1262, 1389, 1736, 1793, 1807
TspGWI ACGGA 2 cut(s) 977, 2019
TspMI CCCGGG 1 cut(s) 1265
TspRI CASTG 5 cut(s) 144, 1196, 1210, 1387, 1649
Van91I CCANNNNNTGG 1 cut(s) 1644
VneI GTGCAC 2 cut(s) 1201, 2106
VpaK11BI GGWCC 1 cut(s) 1786
XagI CCTNNNNNAGG 1 cut(s) 1043
XapI RAATTY 2 cut(s) 133, 512
XbaI TCTAGA 3 cut(s) 967, 1240, 2023
XceI RCATGY 1 cut(s) 1904
XcmI CCANNNNNNNNNTGG 3 cut(s) 952, 969, 1491
XhoI CTCGAG 1 cut(s) 1109
XmaI CCCGGG 1 cut(s) 1265
XspI CTAG 7 cut(s) 968, 1085, 1094, 1157, 1167, 1241, 2024
ZraI GACGTC 1 cut(s) 234
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.