Rorug01G0391500

cytochrome P450

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
50205371 .. 50207308
1938 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0391500.1

Sequence Viewer

Length: 684 bp
ATGCCCAGAAGGTTGGTTTCTGCCGCAGCTCTTTTGTGGGGTTTGCTTCTCTTGGCGACATTAGTTGTCATTCTGAATCGATTTAGCAATGATAAAGTCCTATCAGAGCCAAACAACCTCAAAAGCAAAAGTGAGATTGTTGAGGAAAGTGATGATCTGGAACAAGTCACCCACCAAGTTTTCTTCGATATCGAAATCGATGGAAAACCCATTGGTCGCATAGTCATGGGTCTTTTTGGAAAAACAGTTCCAAAAACCATAGAGAACTTTCGAGCACTATGCACTGGGGAGAAGGGAATTGGAAAGAGTATGAAACCTCTGCACTACAAAGGGAGTATATTTCATAGAATTATTCCCAGCTTTATGATTCAGGGAGGGGATTTCACTCTTGGCGATGGAAGAGGTGGAGAATCGATTTATGGGGAAAAGTTTGCAGATGAAAACTTCAAAGTAAAGCACACTGGACCAGGTTATTTATCAATGGCAAATTCTGGCCAAGACACCAATGGATCACAGTTCTTCATCACGACTGTCAAAACTAGCTGGTTGGATGGTCACCATGTTGTATTTGGCAAGGTGCTTTCTGGAATGGACGTTGTGTACAAGGTTGAACGAGTAGGAGGATCGGATGGGATACCTAAGAGTGAGGTTGTTATCAAAGACAGCGGTGCACTTCCAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

227

Amino Acids

24.8

Weight (kDa)

7.02

Isoelectric Point (pI)

22.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pro_isomerase PF00160 61 - 221 3.9e-47 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000239)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g12320 FvH4_7g28340 FvH4_7g28350 FvH4_7g28350 FvH4_7g28361 FvH4_7g28450 FvH4_7g28450 FvH4_7g28452 FvH4_7g28453 FvH4_7g28453 FvH4_7g28454 FvH4_7g28455 FvH4_7g28458
malus_domestica MD01G1188000.v1.1 MD01G1188200.v1.1 MD02G1199800.v1.1 MD07G1191000.v1.1 MD11G1075700.v1.1 MD12G1092600.v1.1
prunus_persica Prupe.2G148800_v2.0.a1 Prupe.2G284500_v2.0.a1 Prupe.2G284800_v2.0.a1 Prupe.2G285200_v2.0.a1 Prupe.2G285200_v2.0.a1 Prupe.2G285200_v2.0.a1 Prupe.2G285200_v2.0.a1
pyrus_communis pycom02g16380 pycom11g06340
rosa_chinensis RchiOBHm_Chr1g0351121 RchiOBHm_Chr1g0359881 RchiOBHm_Chr1g0359951 RchiOBHm_Chr1g0375301 RchiOBHm_Chr1g0375441 RchiOBHm_Chr1g0375471 RchiOBHm_Chr1g0375491 RchiOBHm_Chr1g0375521 RchiOBHm_Chr1g0375531 RchiOBHm_Chr1g0375571 RchiOBHm_Chr1g0375641 RchiOBHm_Chr1g0375681 RchiOBHm_Chr1g0375701 RchiOBHm_Chr1g0375721 RchiOBHm_Chr1g0375751 RchiOBHm_Chr1g0375811 RchiOBHm_Chr1g0375831 RchiOBHm_Chr2g0116601 RchiOBHm_Chr2g0143131
rosa_laevigata RLG00000018292 RLG00000026650 RLG00000026653 RLG00000026655 RLG00000026657 RLG00000026659 RLG00000026660 RLG00000026662 RLG00000026670 RLG00000027846 RLG00000028430
rosa_multiflora Rmu_co8068694.1_g000001 Rmu_co8138120.1_g000001 Rmu_co8293475.1_g000001 Rmu_sc0000487.1_g000028 Rmu_sc0000487.1_g000030 Rmu_sc0000487.1_g000031 Rmu_sc0000487.1_g000051 Rmu_sc0000554.1_g000038 Rmu_sc0001619.1_g000015 Rmu_sc0001644.1_g000001 Rmu_sc0001644.1_g000009 Rmu_sc0001644.1_g000012 Rmu_sc0001644.1_g000013 Rmu_sc0001644.1_g000020 Rmu_sc0001644.1_g000023 Rmu_sc0001644.1_g000031 Rmu_sc0001943.1_g000001 Rmu_sc0001943.1_g000005 Rmu_sc0006087.1_g000005 Rmu_sc0008800.1_g000004 Rmu_sc0015155.1_g000001 Rmu_ssc0000106.1_g000005 Rmu_ssc0000368.1_g000003
rosa_roxburghii Rroxscaffold_2G00102100 Rroxscaffold_2G00127030 Rroxscaffold_4G00282580 Rroxscaffold_4G00282620 Rroxscaffold_4G00282650 Rroxscaffold_4G00282670 Rroxscaffold_4G00282740 Rroxscaffold_4G00282840 Rroxscaffold_4G00304050
rosa_rugosa Rorug01G0216600 Rorug01G0273300 Rorug01G0273400 Rorug01G0390900 Rorug01G0391000 Rorug01G0391400 Rorug01G0391500 Rorug01G0391600 Rorug01G0391700 Rorug01G0391800 Rorug02G0061300 Rorug02G0207800 Rorug02G0378000 Rorug02G0378100 Rorug02G0378200 Rorug02G0378300 Rorug02G0378300 Rorug02G0378300 Rorug03G0168600 Rorug06G0412800 Rorug06G0412900 Rorug06G0413000
rosa_samantha Rh1AG231000 Rh1AG287500 Rh1AG402800 Rh1CG379000 Rh2BG440100 Rh2CG417400 Rh2DG271100
rosa_wichuraiana Rw0G023590 Rw0G023600 Rw1G020080 Rw1G025530 Rw1G025540 Rw1G035580 Rw1G035650 Rw1G035670 Rw1G035690 Rw1G035700 Rw1G035740 Rw1G035760 Rw1G035780 Rw1G035800 Rw2G020700 Rw2G035250 Rw4G005840 Rw4G005850 Rw4G005860 Rw4G005890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 24, 666
AclWI GGATC 2 cut(s) 517, 631
AcoI YGGCCR 1 cut(s) 493
AcsI RAATTY 1 cut(s) 487
AfaI GTAC 1 cut(s) 602
AgsI TTSAA 2 cut(s) 448, 611
AjnI CCWGG 1 cut(s) 466
AloI GAACNNNNNNTCC 2 cut(s) 231, 263
AluBI AGCT 3 cut(s) 29, 360, 543
AluI AGCT 3 cut(s) 29, 360, 543
Alw21I GWGCWC 2 cut(s) 277, 673
Alw44I GTGCAC 1 cut(s) 669
AlwI GGATC 2 cut(s) 517, 631
AoxI GGCC 1 cut(s) 493
ApaLI GTGCAC 1 cut(s) 669
ApeKI GCWGC 1 cut(s) 26
ApoI RAATTY 1 cut(s) 487
AspS9I GGNCC 1 cut(s) 464
AsuHPI GGTGA 2 cut(s) 160, 548
AvaII GGWCC 1 cut(s) 464
BaeGI GKGCMC 1 cut(s) 673
BalI TGGCCA 1 cut(s) 495
Bbv12I GWGCWC 2 cut(s) 277, 673
BbvI GCAGC 1 cut(s) 38
BccI CCATC 4 cut(s) 194, 389, 545, 623
BcgI CGANNNNNNTGC 2 cut(s) 261, 295
BciT130I CCWGG 1 cut(s) 468
BciVI GTATCC 1 cut(s) 627
BfaI CTAG 1 cut(s) 540
BfuI GTATCC 1 cut(s) 627
BisI GCNGC 2 cut(s) 24, 27
BlsI GCNGC 2 cut(s) 25, 28
Bme1390I CCNGG 1 cut(s) 468
Bme18I GGWCC 1 cut(s) 464
BmgT120I GGNCC 1 cut(s) 464
BmrFI CCNGG 1 cut(s) 468
BmrI ACTGGG 1 cut(s) 294
BmuI ACTGGG 1 cut(s) 294
Bsa29I ATCGAT 3 cut(s) 79, 198, 413
Bse1I ACTGG 2 cut(s) 289, 466
Bse3DI GCAATG 1 cut(s) 94
BseBI CCWGG 1 cut(s) 468
BseCI ATCGAT 3 cut(s) 79, 198, 413
BseGI GGATG 2 cut(s) 556, 634
BseMI GCAATG 1 cut(s) 94
BseNI ACTGG 2 cut(s) 289, 466
BseSI GKGCMC 1 cut(s) 673
BseXI GCAGC 1 cut(s) 38
BseYI CCCAGC 1 cut(s) 356
BsgI GTGCAG 1 cut(s) 305
BshFI GGCC 1 cut(s) 495
BshVI ATCGAT 3 cut(s) 79, 198, 413
BsiHKAI GWGCWC 2 cut(s) 277, 673
BsnI GGCC 1 cut(s) 495
Bsp1286I GDGCHC 2 cut(s) 277, 673
Bsp1407I TGTACA 1 cut(s) 600
Bsp143I GATC 3 cut(s) 154, 509, 623
BspACI CCGC 2 cut(s) 24, 666
BspANI GGCC 1 cut(s) 495
BspDI ATCGAT 3 cut(s) 79, 198, 413
BspPI GGATC 2 cut(s) 517, 631
BsrDI GCAATG 1 cut(s) 94
BsrGI TGTACA 1 cut(s) 600
BsrI ACTGG 2 cut(s) 289, 466
BssMI GATC 3 cut(s) 154, 509, 623
Bst2UI CCWGG 1 cut(s) 468
Bst4CI ACNGT 3 cut(s) 247, 516, 532
Bst6I CTCTTC 1 cut(s) 394
BstAUI TGTACA 1 cut(s) 600
BstDEI CTNAG 1 cut(s) 639
BstEII GGTNACC 1 cut(s) 554
BstF5I GGATG 2 cut(s) 556, 634
BstKTI GATC 3 cut(s) 157, 512, 626
BstMBI GATC 3 cut(s) 154, 509, 623
BstNI CCWGG 1 cut(s) 468
BstPI GGTNACC 1 cut(s) 554
BstSCI CCNGG 1 cut(s) 466
BstSLI GKGCMC 1 cut(s) 673
BstV1I GCAGC 1 cut(s) 38
BstXI CCANNNNNNTGG 1 cut(s) 13
Bsu15I ATCGAT 3 cut(s) 79, 198, 413
BsuI GTATCC 1 cut(s) 627
BsuRI GGCC 1 cut(s) 495
BsuTUI ATCGAT 3 cut(s) 79, 198, 413
BtgZI GCGATG 1 cut(s) 408
BtsCI GGATG 2 cut(s) 556, 634
BtsIMutI CAGTG 2 cut(s) 282, 459
Cfr13I GGNCC 1 cut(s) 464
ClaI ATCGAT 3 cut(s) 79, 198, 413
CsiI ACCWGGT 1 cut(s) 466
Csp6I GTAC 1 cut(s) 601
CviAII CATG 2 cut(s) 226, 560
CviJI RGCY 5 cut(s) 29, 109, 360, 495, 543
CviKI_1 RGCY 5 cut(s) 29, 109, 360, 495, 543
CviQI GTAC 1 cut(s) 601
DdeI CTNAG 1 cut(s) 639
DpnI GATC 3 cut(s) 156, 511, 625
DpnII GATC 3 cut(s) 154, 509, 623
EaeI YGGCCR 1 cut(s) 493
Eam1104I CTCTTC 1 cut(s) 394
EarI CTCTTC 1 cut(s) 394
Eco32I GATATC 1 cut(s) 190
Eco47I GGWCC 1 cut(s) 464
Eco91I GGTNACC 1 cut(s) 554
EcoO65I GGTNACC 1 cut(s) 554
EcoRII CCWGG 1 cut(s) 466
EcoRV GATATC 1 cut(s) 190
FaeI CATG 2 cut(s) 229, 563
FatI CATG 2 cut(s) 225, 559
Fnu4HI GCNGC 2 cut(s) 24, 27
FokI GGATG 2 cut(s) 563, 641
Fsp4HI GCNGC 2 cut(s) 24, 27
FspBI CTAG 1 cut(s) 540
GluI GCNGC 2 cut(s) 24, 27
GsaI CCCAGC 1 cut(s) 360
HaeIII GGCC 1 cut(s) 495
Hin1II CATG 2 cut(s) 229, 563
HinfI GANTC 3 cut(s) 76, 367, 410
HphI GGTGA 2 cut(s) 160, 548
Hpy166II GTNNAC 2 cut(s) 601, 671
Hpy188I TCNGA 3 cut(s) 75, 106, 628
Hpy188III TCNNGA 3 cut(s) 158, 526, 585
Hpy8I GTNNAC 2 cut(s) 601, 671
HpyAV CCTTC 2 cut(s) 3, 286
HpyCH4III ACNGT 3 cut(s) 247, 516, 532
HpyCH4IV ACGT 1 cut(s) 594
HpyCH4V TGCA 4 cut(s) 282, 322, 434, 671
HpyF3I CTNAG 1 cut(s) 639
HpySE526I ACGT 1 cut(s) 594
Hsp92II CATG 2 cut(s) 229, 563
Kzo9I GATC 3 cut(s) 154, 509, 623
Lsp1109I GCAGC 1 cut(s) 38
MabI ACCWGGT 1 cut(s) 466
MaeI CTAG 1 cut(s) 540
MaeII ACGT 1 cut(s) 594
MaeIII GTNAC 2 cut(s) 166, 554
MalI GATC 3 cut(s) 156, 511, 625
MboI GATC 3 cut(s) 154, 509, 623
MboII GAAGA 3 cut(s) 175, 411, 511
MhlI GDGCHC 2 cut(s) 277, 673
MlsI TGGCCA 1 cut(s) 495
MluCI AATT 3 cut(s) 297, 348, 487
MluNI TGGCCA 1 cut(s) 495
MmeI TCCRAC 1 cut(s) 528
MnlI CCTC 7 cut(s) 128, 136, 327, 368, 395, 614, 640
Mox20I TGGCCA 1 cut(s) 495
MscI TGGCCA 1 cut(s) 495
MslI CAYNNNNRTG 1 cut(s) 224
Msp20I TGGCCA 1 cut(s) 495
MspA1I CMGCKG 1 cut(s) 666
MspR9I CCNGG 1 cut(s) 468
MvaI CCWGG 1 cut(s) 468
NdeII GATC 3 cut(s) 154, 509, 623
NlaIII CATG 2 cut(s) 229, 563
NmuCI GTSAC 2 cut(s) 166, 554
PfeI GAWTC 3 cut(s) 76, 367, 410
PkrI GCNGC 2 cut(s) 25, 28
Psp6I CCWGG 1 cut(s) 466
PspEI GGTNACC 1 cut(s) 554
PspFI CCCAGC 1 cut(s) 356
PspGI CCWGG 1 cut(s) 466
PspPI GGNCC 1 cut(s) 464
RsaI GTAC 1 cut(s) 602
RsaNI GTAC 1 cut(s) 601
RseI CAYNNNNRTG 1 cut(s) 224
SatI GCNGC 2 cut(s) 24, 27
Sau3AI GATC 3 cut(s) 154, 509, 623
Sau96I GGNCC 1 cut(s) 464
ScrFI CCNGG 1 cut(s) 468
SduI GDGCHC 2 cut(s) 277, 673
SexAI ACCWGGT 1 cut(s) 466
SinI GGWCC 1 cut(s) 464
SmiMI CAYNNNNRTG 1 cut(s) 224
Sse9I AATT 3 cut(s) 297, 348, 487
SsiI CCGC 2 cut(s) 24, 666
SspMI CTAG 1 cut(s) 540
StyD4I CCNGG 1 cut(s) 466
TaaI ACNGT 3 cut(s) 247, 516, 532
TaiI ACGT 1 cut(s) 597
TaqI TCGA 6 cut(s) 79, 186, 192, 198, 271, 413
TasI AATT 3 cut(s) 297, 348, 487
TatI WGTACW 1 cut(s) 600
TauI GCSGC 1 cut(s) 26
TfiI GAWTC 3 cut(s) 76, 367, 410
TscAI CASTG 2 cut(s) 289, 466
TseFI GTSAC 2 cut(s) 166, 554
TseI GCWGC 1 cut(s) 26
Tsp45I GTSAC 2 cut(s) 166, 554
TspDTI ATGAA 4 cut(s) 326, 332, 453, 511
TspRI CASTG 2 cut(s) 289, 466
VneI GTGCAC 1 cut(s) 669
VpaK11BI GGWCC 1 cut(s) 464
XapI RAATTY 1 cut(s) 487
XcmI CCANNNNNNNNNTGG 2 cut(s) 503, 566
XspI CTAG 1 cut(s) 540
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.