Rorug01G0391400

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000239
Physical Location & Seq
Reverse (-)
50191068 .. 50194825
3758 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0391400.1

Sequence Viewer

Length: 2220 bp
ATGGCTCTTCGATGGTTTCTCCTTCTCAGCCTCATTTGCAGTATTCTACTGCTTGTCGATGTTACTCACTCAGCTGCTCAGGATGCCCGAAAGTCTTATGTTGTGTATATGGGTGGCAAGCCAAAGAACGGGGTACCCATATTACCTGATCTTCATGTGAATATGCTACAAGACGTAGTTGACAGTAGCAACATTGATATTGCACATGAAGATCTGCTTCTTCACAGCTACAAGAGAAGTTTCAATGGATTTGCTGCAATGCTCACAGAGCAAGAAGCACAAAAAATGATTGGAATGGATGGTGTAGTGTCTGTCTTCCCAAGCAAACAGAGGAGTGTCAAAACAACAAAGTCATGGAACTTTCTTGGGTTTCCAGAAACAGTTAAGAGAGGCGCCCTTGAAAGGGATATCATTGTTGGTGTGATAGACAGTGGAATTTGGCCAGAGTCGGACAGCTTTAGTGATGCTGGTTTTGGTCCCCCACCCAAGAAATGGAAAGGCAAATGTCAAGGCAATGGAAATCTTACTTGTAACAATAAAATCATCGGAGCACAATATTATTGTGCTTCTCAATCATTCAAAGAAGATGTTGAGTCTCCAAGAGACTCAAACGGTCATGGAACTCACACCGCATCAACAGCAGCTGGGAACACAGTGATCAAGGCGAGCTTTAATGGTTTAGGGTCGGGAACAGCAAGAGGAGGGGTGCCATCAGCGCGTATTGCTGTGTACAAAGCATGTTGGGGCAGCAGTGGCAGTTGTGACGATGCTGATGTTCTAGCCGCATTCGATGATGCCATTGCTGACGGTGTAGACATTCTCTCTGTTTCCCTCGGGGGCACTATTCCATTTGATTATTTGAATGATTCATATGCAATTGGGTCATTTCACGCTACCAGAAATGGGATATTAGTTTCCATGGCCGCTGGTAACGAAGGTCCGGGCGCAAAAACTGTGACAAACTTTGCACCATGGCAACTTTCTGTGGCTGCTACCACCATAAACCGCCAATTCATCACCAAGGTTCAATTGGGTAACGGTAAAATCTATGAGGGACTTTTACCAAACATATATGACCTCCGGGGTAAATTCTATCCTTTAATTTATGGTGGAGACGCGCCCAATACAAAAGCAGGTGCTGACGGGAGTATCTCTAGGTTTTGTGTAAGAGATGCCTTAGAAGAAGATTTGATCAAAGGTAAAATTGTGTTGTGTGATGGCCCTATGGATGAGGCTGGGATTGGGGCCATATTGGGTGGTGCAGCCGGAATTGTTCTGACTGGAAAAAAAGTCGACGATGAACTGTTTGGCCTTTATCCCGTGCCTGCATCTTTCGTCGGGTTGGAAGAAAACAGCGACATTTACAAATACATAAATTCAACAAGGAACGCAACTGCAACTATATGGAAAAGTGAAGAGATTAGTGATGTATTGGCTCCATACGTGCCCTCCTACTCATCGAGGGGCCCAAATCCGATCAATCCCAACATTCTCAAGCCAGATTTAGCAGCTCCAGGAACTTACATTCTGGCAGCATATCCCCCAAGTGGTGGTGGCGGTAGAGCCGGATACTATTTAGACACCGGGACATCAATGGCATGCCCCCATGCTACGGCCACAGCTGCATACGTCAAATCATTTCACCCTAAATGGTCAGCGGCTGCTATCCAATCGGCTCTCATCACTACTGCTAAACCTATGAATGCCACAACTAGCCCTGACGCTGAATTTGCATACGGAGCTGGCCTAATAAACCCTTCTAGGGCGCCATATCCTGGTTTGGTGTATGATCTTGATGAACAAGACTACATAGATTTTTTGTGTTCACAAGGATACAGTGGTAAACTATTGCAAGCCATAACCAGGGACAAAACTAGTTGCTCATCAAAATCTATTAATAGAACAGCTAATGACATGAACTATCCTTCTTTTGCACTTTCCATCAAGGATCCGAAATTTGTCAATGGGGTCTTCCATAGGACTGTCACTAATGTTGGATCGTCAAAATCCACATACAGAGCTAAAACGGTGGCTCCATTGGGACTCAAAATCAATGTGAATCCAAGTGTGCTATCGTTCACATCTCTCGGGCAAAAGAAATCTTTTGTTGTCACTATAAAAGGGCCGATTGAGAAATCAAATCTAGTCTCTGCATCTTTGGTGTGGGATGATGGTGCTTTCCAAGTCAGGAGCCCCATTGTTGTCTATGTTGCTGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

739

Amino Acids

78.69

Weight (kDa)

7.1

Isoelectric Point (pI)

33.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I9 PF05922 32 - 112 1.2e-12 Peptidase inhibitor I9
Peptidase_S8 PF00082 135 - 582 1.7e-41 Subtilase family
fn3_6 PF17766 638 - 735 7.7e-27 Fibronectin type-III domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000239)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g12320 FvH4_7g28340 FvH4_7g28350 FvH4_7g28350 FvH4_7g28361 FvH4_7g28450 FvH4_7g28450 FvH4_7g28452 FvH4_7g28453 FvH4_7g28453 FvH4_7g28454 FvH4_7g28455 FvH4_7g28458
malus_domestica MD01G1188000.v1.1 MD01G1188200.v1.1 MD02G1199800.v1.1 MD07G1191000.v1.1 MD11G1075700.v1.1 MD12G1092600.v1.1
prunus_persica Prupe.2G148800_v2.0.a1 Prupe.2G284500_v2.0.a1 Prupe.2G284800_v2.0.a1 Prupe.2G285200_v2.0.a1 Prupe.2G285200_v2.0.a1 Prupe.2G285200_v2.0.a1 Prupe.2G285200_v2.0.a1
pyrus_communis pycom02g16380 pycom11g06340
rosa_chinensis RchiOBHm_Chr1g0351121 RchiOBHm_Chr1g0359881 RchiOBHm_Chr1g0359951 RchiOBHm_Chr1g0375301 RchiOBHm_Chr1g0375441 RchiOBHm_Chr1g0375471 RchiOBHm_Chr1g0375491 RchiOBHm_Chr1g0375521 RchiOBHm_Chr1g0375531 RchiOBHm_Chr1g0375571 RchiOBHm_Chr1g0375641 RchiOBHm_Chr1g0375681 RchiOBHm_Chr1g0375701 RchiOBHm_Chr1g0375721 RchiOBHm_Chr1g0375751 RchiOBHm_Chr1g0375811 RchiOBHm_Chr1g0375831 RchiOBHm_Chr2g0116601 RchiOBHm_Chr2g0143131
rosa_laevigata RLG00000018292 RLG00000026650 RLG00000026653 RLG00000026655 RLG00000026657 RLG00000026659 RLG00000026660 RLG00000026662 RLG00000026670 RLG00000027846 RLG00000028430
rosa_multiflora Rmu_co8068694.1_g000001 Rmu_co8138120.1_g000001 Rmu_co8293475.1_g000001 Rmu_sc0000487.1_g000028 Rmu_sc0000487.1_g000030 Rmu_sc0000487.1_g000031 Rmu_sc0000487.1_g000051 Rmu_sc0000554.1_g000038 Rmu_sc0001619.1_g000015 Rmu_sc0001644.1_g000001 Rmu_sc0001644.1_g000009 Rmu_sc0001644.1_g000012 Rmu_sc0001644.1_g000013 Rmu_sc0001644.1_g000020 Rmu_sc0001644.1_g000023 Rmu_sc0001644.1_g000031 Rmu_sc0001943.1_g000001 Rmu_sc0001943.1_g000005 Rmu_sc0006087.1_g000005 Rmu_sc0008800.1_g000004 Rmu_sc0015155.1_g000001 Rmu_ssc0000106.1_g000005 Rmu_ssc0000368.1_g000003
rosa_roxburghii Rroxscaffold_2G00102100 Rroxscaffold_2G00127030 Rroxscaffold_4G00282580 Rroxscaffold_4G00282620 Rroxscaffold_4G00282650 Rroxscaffold_4G00282670 Rroxscaffold_4G00282740 Rroxscaffold_4G00282840 Rroxscaffold_4G00304050
rosa_rugosa Rorug01G0216600 Rorug01G0273300 Rorug01G0273400 Rorug01G0390900 Rorug01G0391000 Rorug01G0391400 Rorug01G0391500 Rorug01G0391600 Rorug01G0391700 Rorug01G0391800 Rorug02G0061300 Rorug02G0207800 Rorug02G0378000 Rorug02G0378100 Rorug02G0378200 Rorug02G0378300 Rorug02G0378300 Rorug02G0378300 Rorug03G0168600 Rorug06G0412800 Rorug06G0412900 Rorug06G0413000
rosa_samantha Rh1AG231000 Rh1AG287500 Rh1AG402800 Rh1CG379000 Rh2BG440100 Rh2CG417400 Rh2DG271100
rosa_wichuraiana Rw0G023590 Rw0G023600 Rw1G020080 Rw1G025530 Rw1G025540 Rw1G035580 Rw1G035650 Rw1G035670 Rw1G035690 Rw1G035700 Rw1G035740 Rw1G035760 Rw1G035780 Rw1G035800 Rw2G020700 Rw2G035250 Rw4G005840 Rw4G005850 Rw4G005860 Rw4G005890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1124
Acc36I ACCTGC 1 cut(s) 1124
Acc65I GGTACC 1 cut(s) 133
AccB1I GGYRCC 4 cut(s) 133, 392, 706, 1765
AccB7I CCANNNNNTGG 3 cut(s) 492, 1550, 1775
AccI GTMKAC 2 cut(s) 813, 1293
AccII CGCG 2 cut(s) 718, 1118
AciI CCGC 6 cut(s) 630, 783, 924, 1006, 1557, 1658
AclWI GGATC 3 cut(s) 1943, 1956, 2005
AcoI YGGCCR 3 cut(s) 440, 921, 1614
AcsI RAATTY 5 cut(s) 435, 1088, 1375, 1727, 1955
AcyI GRCGYC 2 cut(s) 393, 1766
AfaI GTAC 2 cut(s) 135, 731
AgsI TTSAA 6 cut(s) 244, 401, 580, 862, 1028, 1380
AhlI ACTAGT 1 cut(s) 1874
AjnI CCWGG 3 cut(s) 1513, 1774, 1862
Alw21I GWGCWC 1 cut(s) 553
Alw26I GTCTC 4 cut(s) 597, 600, 1107, 2152
AlwI GGATC 3 cut(s) 1943, 1956, 2005
AlwNI CAGNNNCTG 3 cut(s) 644, 1139, 1661
Ama87I CYCGRG 2 cut(s) 833, 2087
AoxI GGCC 9 cut(s) 440, 921, 1219, 1245, 1309, 1465, 1614, 1744, 2123
ApaI GGGCCC 1 cut(s) 1469
ApoI RAATTY 5 cut(s) 435, 1088, 1375, 1727, 1955
ArsI GACNNNNNNTTYG 2 cut(s) 1712, 1744
AseI ATTAAT 1 cut(s) 1896
Asp718I GGTACC 1 cut(s) 133
AspLEI GCGC 5 cut(s) 395, 718, 947, 1120, 1768
AspS9I GGNCC 7 cut(s) 476, 938, 1220, 1245, 1465, 1466, 2123
AsuC2I CCSGG 3 cut(s) 942, 1082, 1585
AsuHPI GGTGA 2 cut(s) 1009, 1634
AvaI CYCGRG 2 cut(s) 833, 2087
AvaII GGWCC 2 cut(s) 476, 938
BaeGI GKGCMC 3 cut(s) 842, 1449, 1469
BaeI ACNNNNGTAYC 4 cut(s) 1132, 1165, 1825, 1858
BalI TGGCCA 1 cut(s) 442
BamHI GGATCC 1 cut(s) 1948
BanI GGYRCC 4 cut(s) 133, 392, 706, 1765
BanII GRGCYC 2 cut(s) 1469, 2195
BbsI GAAGAC 2 cut(s) 307, 1963
Bbv12I GWGCWC 1 cut(s) 553
BccI CCATC 6 cut(s) 6, 293, 718, 1211, 1949, 2165
BceAI ACGGC 1 cut(s) 1629
BciT130I CCWGG 3 cut(s) 1515, 1776, 1864
BciVI GTATCC 2 cut(s) 1562, 1826
BclI TGATCA 2 cut(s) 657, 1191
BcnI CCSGG 3 cut(s) 942, 1082, 1585
BcoDI GTCTC 4 cut(s) 597, 600, 1107, 2152
BcuI ACTAGT 1 cut(s) 1874
BfaI CTAG 6 cut(s) 779, 1155, 1713, 1761, 1875, 2144
BfoI RGCGCY 2 cut(s) 396, 1769
BfuAI ACCTGC 1 cut(s) 1124
BfuI GTATCC 2 cut(s) 1562, 1826
BglII AGATCT 1 cut(s) 211
Bme1390I CCNGG 6 cut(s) 942, 1082, 1515, 1585, 1776, 1864
Bme18I GGWCC 2 cut(s) 476, 938
BmeT110I CYCGRG 2 cut(s) 833, 2087
BmgT120I GGNCC 7 cut(s) 476, 938, 1220, 1245, 1465, 1466, 2123
BmrFI CCNGG 6 cut(s) 942, 1082, 1515, 1585, 1776, 1864
BmsI GCATC 8 cut(s) 73, 454, 641, 757, 784, 1162, 1337, 2162
BpiI GAAGAC 2 cut(s) 307, 1963
BpmI CTGGAG 1 cut(s) 1497
Bpu10I CCTNAGC 1 cut(s) 78
BpuEI CTTGAG 1 cut(s) 1478
BpuMI CCSGG 3 cut(s) 942, 1082, 1585
BsaAI YACGTR 1 cut(s) 1444
BsaHI GRCGYC 2 cut(s) 393, 1766
BsaJI CCNNGG 6 cut(s) 832, 918, 971, 1020, 1081, 1863
BsaXI ACNNNNNCTCC 4 cut(s) 1433, 1463, 2017, 2047
Bse1I ACTGG 1 cut(s) 1285
Bse3DI GCAATG 3 cut(s) 264, 520, 798
BseBI CCWGG 3 cut(s) 1515, 1776, 1864
BseDI CCNNGG 6 cut(s) 832, 918, 971, 1020, 1081, 1863
BseGI GGATG 4 cut(s) 88, 304, 1234, 2173
BseMI GCAATG 3 cut(s) 264, 520, 798
BseMII CTCAG 3 cut(s) 40, 84, 92
BseNI ACTGG 1 cut(s) 1285
BseRI GAGGAG 2 cut(s) 346, 714
BseSI GKGCMC 3 cut(s) 842, 1449, 1469
BseYI CCCAGC 2 cut(s) 644, 1235
BsgI GTGCAG 1 cut(s) 1281
Bsh1236I CGCG 2 cut(s) 718, 1118
BshFI GGCC 9 cut(s) 442, 923, 1221, 1247, 1311, 1467, 1616, 1746, 2125
BshNI GGYRCC 4 cut(s) 133, 392, 706, 1765
BsiHKAI GWGCWC 1 cut(s) 553
BsiHKCI CYCGRG 2 cut(s) 833, 2087
BsiSI CCGG 5 cut(s) 941, 1081, 1266, 1566, 1584
BslFI GGGAC 5 cut(s) 462, 1068, 1600, 1880, 2055
BsmAI GTCTC 4 cut(s) 597, 600, 1107, 2152
BsmBI CGTCTC 1 cut(s) 1107
BsmFI GGGAC 5 cut(s) 462, 1068, 1600, 1880, 2055
BsmI GAATGC 2 cut(s) 785, 1708
BsnI GGCC 9 cut(s) 442, 923, 1221, 1247, 1311, 1467, 1616, 1746, 2125
BsoBI CYCGRG 2 cut(s) 833, 2087
Bsp120I GGGCCC 1 cut(s) 1465
Bsp1286I GDGCHC 5 cut(s) 553, 842, 1449, 1469, 2195
Bsp1407I TGTACA 1 cut(s) 729
Bsp143I GATC 8 cut(s) 148, 211, 657, 1191, 1476, 1789, 1948, 1997
Bsp19I CCATGG 2 cut(s) 918, 971
BspACI CCGC 6 cut(s) 630, 783, 924, 1006, 1557, 1658
BspANI GGCC 9 cut(s) 442, 923, 1221, 1247, 1311, 1467, 1616, 1746, 2125
BspCNI CTCAG 3 cut(s) 39, 83, 91
BspFNI CGCG 2 cut(s) 718, 1118
BspMI ACCTGC 1 cut(s) 1124
BspPI GGATC 3 cut(s) 1943, 1956, 2005
BspQI GCTCTTC 1 cut(s) 12
BspT107I GGYRCC 4 cut(s) 133, 392, 706, 1765
BsrDI GCAATG 3 cut(s) 264, 520, 798
BsrGI TGTACA 1 cut(s) 729
BsrI ACTGG 1 cut(s) 1285
BssECI CCNNGG 6 cut(s) 832, 918, 971, 1020, 1081, 1863
BssMI GATC 8 cut(s) 148, 211, 657, 1191, 1476, 1789, 1948, 1997
BssNI GRCGYC 2 cut(s) 393, 1766
BssT1I CCWWGG 3 cut(s) 918, 971, 1020
Bst2UI CCWGG 3 cut(s) 1515, 1776, 1864
Bst6I CTCTTC 2 cut(s) 12, 1410
BstACI GRCGYC 2 cut(s) 393, 1766
BstAUI TGTACA 1 cut(s) 729
BstBAI YACGTR 1 cut(s) 1444
BstC8I GCNNGC 6 cut(s) 119, 667, 1326, 1600, 1744, 1854
BstDEI CTNAG 4 cut(s) 26, 70, 78, 1177
BstDSI CCRYGG 2 cut(s) 918, 971
BstF5I GGATG 4 cut(s) 88, 304, 1234, 2173
BstFNI CGCG 2 cut(s) 718, 1118
BstH2I RGCGCY 2 cut(s) 396, 1769
BstHHI GCGC 5 cut(s) 395, 718, 947, 1120, 1768
BstKTI GATC 8 cut(s) 151, 214, 660, 1194, 1479, 1792, 1951, 2000
BstMAI GTCTC 4 cut(s) 597, 600, 1107, 2152
BstMBI GATC 8 cut(s) 148, 211, 657, 1191, 1476, 1789, 1948, 1997
BstNI CCWGG 3 cut(s) 1515, 1776, 1864
BstNSI RCATGY 2 cut(s) 741, 1602
BstSCI CCNGG 6 cut(s) 940, 1080, 1513, 1583, 1774, 1862
BstSLI GKGCMC 3 cut(s) 842, 1449, 1469
BstUI CGCG 2 cut(s) 718, 1118
BstV2I GAAGAC 2 cut(s) 307, 1963
BstX2I RGATCY 2 cut(s) 211, 1948
BstYI RGATCY 2 cut(s) 211, 1948
BsuI GTATCC 2 cut(s) 1562, 1826
BsuRI GGCC 9 cut(s) 442, 923, 1221, 1247, 1311, 1467, 1616, 1746, 2125
BtgI CCRYGG 2 cut(s) 918, 971
BtsCI GGATG 4 cut(s) 88, 304, 1234, 2173
BtsI GCAGTG 1 cut(s) 757
BtsIMutI CAGTG 4 cut(s) 436, 660, 757, 1843
BveI ACCTGC 1 cut(s) 1124
Cac8I GCNNGC 6 cut(s) 119, 667, 1326, 1600, 1744, 1854
CaiI CAGNNNCTG 3 cut(s) 644, 1139, 1661
CfoI GCGC 5 cut(s) 395, 718, 947, 1120, 1768
Cfr13I GGNCC 7 cut(s) 476, 938, 1220, 1245, 1465, 1466, 2123
CseI GACGC 2 cut(s) 1124, 1730
Csp6I GTAC 2 cut(s) 134, 730
CviQI GTAC 2 cut(s) 134, 730
DdeI CTNAG 4 cut(s) 26, 70, 78, 1177
DinI GGCGCC 2 cut(s) 394, 1767
DpnI GATC 8 cut(s) 150, 213, 659, 1193, 1478, 1791, 1950, 1999
DpnII GATC 8 cut(s) 148, 211, 657, 1191, 1476, 1789, 1948, 1997
EaeI YGGCCR 3 cut(s) 440, 921, 1614
Eam1104I CTCTTC 2 cut(s) 12, 1410
EarI CTCTTC 2 cut(s) 12, 1410
Eco130I CCWWGG 3 cut(s) 918, 971, 1020
Eco24I GRGCYC 2 cut(s) 1469, 2195
Eco32I GATATC 1 cut(s) 409
Eco47I GGWCC 2 cut(s) 476, 938
Eco88I CYCGRG 2 cut(s) 833, 2087
EcoO109I RGGNCCY 1 cut(s) 1465
EcoRII CCWGG 3 cut(s) 1513, 1774, 1862
EcoRV GATATC 1 cut(s) 409
EcoT14I CCWWGG 3 cut(s) 918, 971, 1020
EcoT38I GRGCYC 2 cut(s) 1469, 2195
EgeI GGCGCC 2 cut(s) 394, 1767
EheI GGCGCC 2 cut(s) 394, 1767
ErhI CCWWGG 3 cut(s) 918, 971, 1020
Esp3I CGTCTC 1 cut(s) 1107
FalI AAGNNNNNCTT 4 cut(s) 201, 233, 653, 685
FaqI GGGAC 5 cut(s) 462, 1068, 1600, 1880, 2055
FauNDI CATATG 1 cut(s) 871
FbaI TGATCA 2 cut(s) 657, 1191
FblI GTMKAC 2 cut(s) 813, 1293
FokI GGATG 4 cut(s) 95, 311, 1241, 2180
FriOI GRGCYC 2 cut(s) 1469, 2195
FspBI CTAG 6 cut(s) 779, 1155, 1713, 1761, 1875, 2144
GlaI GCGC 5 cut(s) 394, 717, 946, 1119, 1767
GsaI CCCAGC 2 cut(s) 648, 1239
GsuI CTGGAG 1 cut(s) 1497
HaeII RGCGCY 2 cut(s) 396, 1769
HaeIII GGCC 9 cut(s) 442, 923, 1221, 1247, 1311, 1467, 1616, 1746, 2125
HapII CCGG 5 cut(s) 941, 1081, 1266, 1566, 1584
HgaI GACGC 2 cut(s) 1124, 1730
HhaI GCGC 5 cut(s) 395, 718, 947, 1120, 1768
Hin1I GRCGYC 2 cut(s) 393, 1766
Hin6I GCGC 5 cut(s) 393, 716, 945, 1118, 1766
HinP1I GCGC 5 cut(s) 393, 716, 945, 1118, 1766
HincII GTYRAC 2 cut(s) 181, 1294
HindII GTYRAC 2 cut(s) 181, 1294
HinfI GANTC 6 cut(s) 446, 593, 605, 866, 2043, 2059
HpaII CCGG 5 cut(s) 941, 1081, 1266, 1566, 1584
HphI GGTGA 2 cut(s) 1009, 1634
Hpy166II GTNNAC 7 cut(s) 181, 730, 814, 1294, 1826, 1844, 2079
Hpy188I TCNGA 5 cut(s) 451, 548, 1278, 1476, 1953
Hpy188III TCNNGA 5 cut(s) 80, 374, 687, 1793, 2188
Hpy8I GTNNAC 7 cut(s) 181, 730, 814, 1294, 1826, 1844, 2079
Hpy99I CGWCG 2 cut(s) 1298, 1340
HpyAV CCTTC 4 cut(s) 32, 929, 1767, 1935
HpyCH4IV ACGT 3 cut(s) 174, 1443, 1629
HpyF3I CTNAG 4 cut(s) 26, 70, 78, 1177
HpySE526I ACGT 3 cut(s) 174, 1443, 1629
Hsp92I GRCGYC 2 cut(s) 393, 1766
HspAI GCGC 5 cut(s) 393, 716, 945, 1118, 1766
KasI GGCGCC 2 cut(s) 392, 1765
KpnI GGTACC 1 cut(s) 137
Ksp22I TGATCA 2 cut(s) 657, 1191
Kzo9I GATC 8 cut(s) 148, 211, 657, 1191, 1476, 1789, 1948, 1997
LguI GCTCTTC 1 cut(s) 12
LmnI GCTCC 6 cut(s) 548, 1441, 1516, 1739, 2038, 2190
LweI GCATC 8 cut(s) 73, 454, 641, 757, 784, 1162, 1337, 2162
MaeI CTAG 6 cut(s) 779, 1155, 1713, 1761, 1875, 2144
MaeII ACGT 3 cut(s) 174, 1443, 1629
MaeIII GTNAC 8 cut(s) 61, 530, 761, 929, 955, 1034, 1984, 2110
MalI GATC 8 cut(s) 150, 213, 659, 1193, 1478, 1791, 1950, 1999
MboI GATC 8 cut(s) 148, 211, 657, 1191, 1476, 1789, 1948, 1997
MfeI CAATTG 2 cut(s) 876, 1028
MflI RGATCY 2 cut(s) 211, 1948
MhlI GDGCHC 5 cut(s) 553, 842, 1449, 1469, 2195
MlsI TGGCCA 1 cut(s) 442
MluNI TGGCCA 1 cut(s) 442
Mly113I GGCGCC 2 cut(s) 393, 1766
MlyI GAGTC 4 cut(s) 455, 599, 602, 2037
MmeI TCCRAC 3 cut(s) 429, 1323, 1975
Mox20I TGGCCA 1 cut(s) 442
MscI TGGCCA 1 cut(s) 442
MseI TTAA 5 cut(s) 384, 672, 1100, 1896, 2218
Msp20I TGGCCA 1 cut(s) 442
MspA1I CMGCKG 5 cut(s) 74, 644, 926, 1622, 1658
MspI CCGG 5 cut(s) 941, 1081, 1266, 1566, 1584
MspR9I CCNGG 6 cut(s) 942, 1082, 1515, 1585, 1776, 1864
MunI CAATTG 2 cut(s) 876, 1028
Mva1269I GAATGC 2 cut(s) 785, 1708
MvaI CCWGG 3 cut(s) 1515, 1776, 1864
MvnI CGCG 2 cut(s) 718, 1118
NarI GGCGCC 2 cut(s) 393, 1766
NciI CCSGG 3 cut(s) 942, 1082, 1585
NcoI CCATGG 2 cut(s) 918, 971
NdeI CATATG 1 cut(s) 871
NdeII GATC 8 cut(s) 148, 211, 657, 1191, 1476, 1789, 1948, 1997
NmuCI GTSAC 4 cut(s) 761, 955, 1984, 2110
NspI RCATGY 2 cut(s) 741, 1602
PaeI GCATGC 1 cut(s) 1602
PaqCI CACCTGC 1 cut(s) 1124
PciSI GCTCTTC 1 cut(s) 12
PctI GAATGC 2 cut(s) 785, 1708
PfeI GAWTC 2 cut(s) 866, 2059
PflMI CCANNNNNTGG 3 cut(s) 492, 1550, 1775
PfoI TCCNGGA 1 cut(s) 1513
PleI GAGTC 4 cut(s) 454, 599, 601, 2037
PluTI GGCGCC 2 cut(s) 396, 1769
PpsI GAGTC 4 cut(s) 454, 599, 601, 2037
Ppu21I YACGTR 1 cut(s) 1444
PshBI ATTAAT 1 cut(s) 1896
Psp6I CCWGG 3 cut(s) 1513, 1774, 1862
PspFI CCCAGC 2 cut(s) 644, 1235
PspGI CCWGG 3 cut(s) 1513, 1774, 1862
PspOMI GGGCCC 1 cut(s) 1465
PspPI GGNCC 7 cut(s) 476, 938, 1220, 1245, 1465, 1466, 2123
PstNI CAGNNNCTG 3 cut(s) 644, 1139, 1661
PsuI RGATCY 2 cut(s) 211, 1948
PvuII CAGCTG 3 cut(s) 74, 644, 1622
RsaI GTAC 2 cut(s) 135, 731
RsaNI GTAC 2 cut(s) 134, 730
SalI GTCGAC 1 cut(s) 1292
SapI GCTCTTC 1 cut(s) 12
SaqAI TTAA 5 cut(s) 384, 672, 1100, 1896, 2218
Sau3AI GATC 8 cut(s) 148, 211, 657, 1191, 1476, 1789, 1948, 1997
Sau96I GGNCC 7 cut(s) 476, 938, 1220, 1245, 1465, 1466, 2123
SchI GAGTC 4 cut(s) 455, 599, 602, 2037
ScrFI CCNGG 6 cut(s) 942, 1082, 1515, 1585, 1776, 1864
SduI GDGCHC 5 cut(s) 553, 842, 1449, 1469, 2195
SfaNI GCATC 8 cut(s) 73, 454, 641, 757, 784, 1162, 1337, 2162
SfoI GGCGCC 2 cut(s) 394, 1767
SinI GGWCC 2 cut(s) 476, 938
SmlI CTYRAG 1 cut(s) 1493
SmoI CTYRAG 1 cut(s) 1493
SpeI ACTAGT 1 cut(s) 1874
SphI GCATGC 1 cut(s) 1602
SsiI CCGC 6 cut(s) 630, 783, 924, 1006, 1557, 1658
SspDI GGCGCC 2 cut(s) 392, 1765
SspI AATATT 1 cut(s) 557
SspMI CTAG 6 cut(s) 779, 1155, 1713, 1761, 1875, 2144
StyD4I CCNGG 6 cut(s) 940, 1080, 1513, 1583, 1774, 1862
StyI CCWWGG 3 cut(s) 918, 971, 1020
TaiI ACGT 3 cut(s) 177, 1446, 1632
TaqI TCGA 5 cut(s) 10, 57, 789, 1293, 1460
TatI WGTACW 1 cut(s) 729
TauI GCSGC 3 cut(s) 785, 926, 1661
TfiI GAWTC 2 cut(s) 866, 2059
Tru1I TTAA 5 cut(s) 384, 672, 1100, 1896, 2218
Tru9I TTAA 5 cut(s) 384, 672, 1100, 1896, 2218
TscAI CASTG 4 cut(s) 436, 660, 757, 1843
TseFI GTSAC 4 cut(s) 761, 955, 1984, 2110
Tsp45I GTSAC 4 cut(s) 761, 955, 1984, 2110
TspDTI ATGAA 8 cut(s) 143, 222, 858, 1003, 1314, 1715, 1812, 1931
TspGWI ACGGA 1 cut(s) 1752
TspRI CASTG 4 cut(s) 436, 660, 757, 1843
Van91I CCANNNNNTGG 3 cut(s) 492, 1550, 1775
VpaK11BI GGWCC 2 cut(s) 476, 938
VspI ATTAAT 1 cut(s) 1896
XapI RAATTY 5 cut(s) 435, 1088, 1375, 1727, 1955
XceI RCATGY 2 cut(s) 741, 1602
XcmI CCANNNNNNNNNTGG 2 cut(s) 489, 1027
XmiI GTMKAC 2 cut(s) 813, 1293
XspI CTAG 6 cut(s) 779, 1155, 1713, 1761, 1875, 2144
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.