Rw4G005840

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000239
Physical Location & Seq
Forward (+)
11801316 .. 11805217
3902 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G005840.1

Sequence Viewer

Length: 1512 bp
ATGTCGACTACTCCATATTCACGCGCGTTGTGCTCTTTTTCTCCTTCGACTAAGGTTGTTTTTTCCCATAGGCTCCATGCCAGAAGATTCTGTGCGAAGAAAAAGAGATACCATCCCATTGCCGGAACTGTCTTGCACCAACTGGTCAACTTCTATAGGATGCACCATTACATGACTGAGCTTGCATGCAAATACAAAACTTACAGGGTGCTGGACTTGTTCAGAACTGCGGTTTACACTGCAGATCCCACAAATGTGGAATATGTGCTCAAAACAAATTTTACTAACTATGGCAAGGGGTCATATCTTTACAGCATTTTGTCAGATAGTCTGGGTGACGGGATCTTTGTGGTGGATGGCCAAAAGTGGCGGCATCAAAGGAAGGCATCGAACTCTGAATTCTCAACAAAAGTAATCAGAGACTTCAGCAGTACAGTCTTCAAAACCATTGCAGTTAAACTTGCTAGCATTATTCATGAGGCTGCAACCAGGAACCAAGCAACAGATATCCAAGACTTGTTTATGAAATCGTCCTTAGATTCAATCATCAAGATTTTACTTGGTATTGAACTAGACAGCATGAGTGGAACAAATGAAGAAGGTACCCGGTTTTCCGATGCTTTTGATGGAGCAAACGAAGCTATCTTGTTGCGGTTTGTTGATATTTTCTGGAAGATCGAACGGCTATTAACCATTGGTAGGGAAGCTGGGTTAAAGAAGAACAACAAATTAATTGATCAATTTATGTATAACTTAATCAAAAGCAAGATTGAAACCATCCAGAATTCAGAAGATCAGCTATATTTAAATAAAAGCGACTTTGTTTCAAGGCTTTTGGATTTGAAAGAGACTGATCAAAAATACTTAAGAGACATGGTCTTCAACATTATTATTGCCGGAAGAGACTCGACAGCTACGACTCTCTCATGGTTTCTTTGTATGATGTGCAAGCATCTTCATATACAAGAAAAGATTGCCCAGGAAGTCAGAGAAGCTATAAATCTGAAAGATGTTTCAAGTGTTAATGAGCTTGCTACCAGCATTAATCAAGAATCCCTTAACAAAATGCAATATCTCCATGCAGCTTTGACTGAGACACTCAGACTCTATCCTCCTCTTCCTATGAATGCGAAGATGTGTTTATCCGATGATATCTGGCCAGATGGATTTAGTGTCAAAAAAGGAGATATGGTGGTATACCAACCTTATTCAATGGGCAGGATGAAATTTCTATGGGGTGATGATGCAGAAGAGTTTCGGCCAGAGAGATGGCTCGATGAACAAGGCCATTTCAAGGATGAAAGCCCTTTCAAATTCACAGCCTTCCAGGCCGGTCCAAGAATTTGTCTTGGAAAGGAACATGCTTATATGCAGATGAAGATCTTTTCTGCTGTGCTTTTAGGCAGCTATATATTCAAGCTAGCTGATGAGAAAAAAGTGGTTAACTACAAGACCATGGTCGGTCTCCAAATTGATGGAGGACTTTATGTGCATGCCTGCCCAAGATTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

503

Amino Acids

57.87

Weight (kDa)

8.89

Isoelectric Point (pI)

36.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 38 - 484 2.1e-74 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000239)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g12320 FvH4_7g28340 FvH4_7g28350 FvH4_7g28350 FvH4_7g28361 FvH4_7g28450 FvH4_7g28450 FvH4_7g28452 FvH4_7g28453 FvH4_7g28453 FvH4_7g28454 FvH4_7g28455 FvH4_7g28458
malus_domestica MD01G1188000.v1.1 MD01G1188200.v1.1 MD02G1199800.v1.1 MD07G1191000.v1.1 MD11G1075700.v1.1 MD12G1092600.v1.1
prunus_persica Prupe.2G148800_v2.0.a1 Prupe.2G284500_v2.0.a1 Prupe.2G284800_v2.0.a1 Prupe.2G285200_v2.0.a1 Prupe.2G285200_v2.0.a1 Prupe.2G285200_v2.0.a1 Prupe.2G285200_v2.0.a1
pyrus_communis pycom02g16380 pycom11g06340
rosa_chinensis RchiOBHm_Chr1g0351121 RchiOBHm_Chr1g0359881 RchiOBHm_Chr1g0359951 RchiOBHm_Chr1g0375301 RchiOBHm_Chr1g0375441 RchiOBHm_Chr1g0375471 RchiOBHm_Chr1g0375491 RchiOBHm_Chr1g0375521 RchiOBHm_Chr1g0375531 RchiOBHm_Chr1g0375571 RchiOBHm_Chr1g0375641 RchiOBHm_Chr1g0375681 RchiOBHm_Chr1g0375701 RchiOBHm_Chr1g0375721 RchiOBHm_Chr1g0375751 RchiOBHm_Chr1g0375811 RchiOBHm_Chr1g0375831 RchiOBHm_Chr2g0116601 RchiOBHm_Chr2g0143131
rosa_laevigata RLG00000018292 RLG00000026650 RLG00000026653 RLG00000026655 RLG00000026657 RLG00000026659 RLG00000026660 RLG00000026662 RLG00000026670 RLG00000027846 RLG00000028430
rosa_multiflora Rmu_co8068694.1_g000001 Rmu_co8138120.1_g000001 Rmu_co8293475.1_g000001 Rmu_sc0000487.1_g000028 Rmu_sc0000487.1_g000030 Rmu_sc0000487.1_g000031 Rmu_sc0000487.1_g000051 Rmu_sc0000554.1_g000038 Rmu_sc0001619.1_g000015 Rmu_sc0001644.1_g000001 Rmu_sc0001644.1_g000009 Rmu_sc0001644.1_g000012 Rmu_sc0001644.1_g000013 Rmu_sc0001644.1_g000020 Rmu_sc0001644.1_g000023 Rmu_sc0001644.1_g000031 Rmu_sc0001943.1_g000001 Rmu_sc0001943.1_g000005 Rmu_sc0006087.1_g000005 Rmu_sc0008800.1_g000004 Rmu_sc0015155.1_g000001 Rmu_ssc0000106.1_g000005 Rmu_ssc0000368.1_g000003
rosa_roxburghii Rroxscaffold_2G00102100 Rroxscaffold_2G00127030 Rroxscaffold_4G00282580 Rroxscaffold_4G00282620 Rroxscaffold_4G00282650 Rroxscaffold_4G00282670 Rroxscaffold_4G00282740 Rroxscaffold_4G00282840 Rroxscaffold_4G00304050
rosa_rugosa Rorug01G0216600 Rorug01G0273300 Rorug01G0273400 Rorug01G0390900 Rorug01G0391000 Rorug01G0391400 Rorug01G0391500 Rorug01G0391600 Rorug01G0391700 Rorug01G0391800 Rorug02G0061300 Rorug02G0207800 Rorug02G0378000 Rorug02G0378100 Rorug02G0378200 Rorug02G0378300 Rorug02G0378300 Rorug02G0378300 Rorug03G0168600 Rorug06G0412800 Rorug06G0412900 Rorug06G0413000
rosa_samantha Rh1AG231000 Rh1AG287500 Rh1AG402800 Rh1CG379000 Rh2BG440100 Rh2CG417400 Rh2DG271100
rosa_wichuraiana Rw0G023590 Rw0G023600 Rw1G020080 Rw1G025530 Rw1G025540 Rw1G035580 Rw1G035650 Rw1G035670 Rw1G035690 Rw1G035700 Rw1G035740 Rw1G035760 Rw1G035780 Rw1G035800 Rw2G020700 Rw2G035250 Rw4G005840 Rw4G005850 Rw4G005860 Rw4G005890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 602
AccB1I GGYRCC 1 cut(s) 602
AccI GTMKAC 2 cut(s) 5, 1197
AccII CGCG 2 cut(s) 24, 26
AciI CCGC 3 cut(s) 230, 370, 652
AclWI GGATC 2 cut(s) 239, 350
AcoI YGGCCR 3 cut(s) 358, 1157, 1259
AcsI RAATTY 6 cut(s) 277, 398, 784, 1226, 1313, 1341
AcuI CTGAAG 1 cut(s) 409
AfaI GTAC 2 cut(s) 433, 604
AfiI CCNNNNNNNGG 3 cut(s) 122, 699, 1294
AflII CTTAAG 1 cut(s) 865
AjnI CCWGG 3 cut(s) 488, 978, 1326
AleI CACNNNNGTG 1 cut(s) 254
Alw21I GWGCWC 2 cut(s) 35, 270
Alw26I GTCTC 6 cut(s) 414, 842, 864, 897, 1088, 1469
AlwI GGATC 2 cut(s) 239, 350
AoxI GGCC 5 cut(s) 358, 1157, 1259, 1285, 1329
ApeKI GCWGC 3 cut(s) 482, 1082, 1404
ApoI RAATTY 6 cut(s) 277, 398, 784, 1226, 1313, 1341
ArsI GACNNNNNNTTYG 2 cut(s) 329, 361
AseI ATTAAT 2 cut(s) 731, 1044
Asp700I GAANNNNTTC 1 cut(s) 1254
Asp718I GGTACC 1 cut(s) 602
AspLEI GCGC 1 cut(s) 26
AspS9I GGNCC 1 cut(s) 1334
AsuC2I CCSGG 1 cut(s) 607
AsuHPI GGTGA 2 cut(s) 347, 1250
AsuNHI GCTAGC 2 cut(s) 464, 1420
AvaII GGWCC 1 cut(s) 1334
BalI TGGCCA 2 cut(s) 360, 1159
BanI GGYRCC 1 cut(s) 602
BbsI GAAGAC 2 cut(s) 430, 871
Bbv12I GWGCWC 2 cut(s) 35, 270
BbvI GCAGC 3 cut(s) 469, 1094, 1416
BccI CCATC 7 cut(s) 120, 350, 620, 785, 1157, 1263, 1469
BceAI ACGGC 1 cut(s) 698
BciT130I CCWGG 3 cut(s) 490, 980, 1328
BclI TGATCA 2 cut(s) 736, 853
BcnI CCSGG 1 cut(s) 607
BcoDI GTCTC 6 cut(s) 414, 842, 864, 897, 1088, 1469
BfaI CTAG 3 cut(s) 465, 572, 1421
BfmI CTRYAG 2 cut(s) 154, 240
BfrI CTTAAG 1 cut(s) 865
BglI GCCNNNNNGGC 1 cut(s) 1328
BglII AGATCT 1 cut(s) 1380
BisI GCNGC 4 cut(s) 371, 483, 1083, 1405
BlsI GCNGC 4 cut(s) 372, 484, 1084, 1406
Bme1390I CCNGG 4 cut(s) 490, 607, 980, 1328
Bme18I GGWCC 1 cut(s) 1334
BmgT120I GGNCC 1 cut(s) 1334
BmiI GGNNCC 3 cut(s) 74, 494, 604
BmrFI CCNGG 4 cut(s) 490, 607, 980, 1328
BmsI GCATC 6 cut(s) 150, 382, 395, 607, 961, 1234
BmtI GCTAGC 2 cut(s) 468, 1424
BoxI GACNNNNGTC 1 cut(s) 1457
BpiI GAAGAC 2 cut(s) 430, 871
BpuMI CCSGG 1 cut(s) 607
BsaBI GATNNNNATC 1 cut(s) 1379
BsaI GGTCTC 1 cut(s) 1469
BsaJI CCNNGG 2 cut(s) 978, 1455
BsaXI ACNNNNNCTCC 2 cut(s) 1176, 1206
Bsc4I CCNNNNNNNGG 3 cut(s) 122, 699, 1294
Bse118I RCCGGY 1 cut(s) 1331
Bse1I ACTGG 1 cut(s) 147
Bse3DI GCAATG 2 cut(s) 117, 447
Bse8I GATNNNNATC 1 cut(s) 1379
BseBI CCWGG 3 cut(s) 490, 980, 1328
BseDI CCNNGG 2 cut(s) 978, 1455
BseGI GGATG 6 cut(s) 112, 165, 361, 777, 1227, 1303
BseJI GATNNNNATC 1 cut(s) 1379
BseLI CCNNNNNNNGG 3 cut(s) 122, 699, 1294
BseMI GCAATG 2 cut(s) 117, 447
BseMII CTCAG 3 cut(s) 168, 1083, 1114
BseNI ACTGG 1 cut(s) 147
BseRI GAGGAG 1 cut(s) 1104
BseXI GCAGC 3 cut(s) 469, 1094, 1416
BseYI CCCAGC 1 cut(s) 707
Bsh1236I CGCG 2 cut(s) 24, 26
BshFI GGCC 5 cut(s) 360, 1159, 1261, 1287, 1331
BshNI GGYRCC 1 cut(s) 602
BsiHKAI GWGCWC 2 cut(s) 35, 270
BsiSI CCGG 4 cut(s) 123, 607, 897, 1332
BslI CCNNNNNNNGG 3 cut(s) 122, 699, 1294
BsmAI GTCTC 6 cut(s) 414, 842, 864, 897, 1088, 1469
BsmI GAATGC 1 cut(s) 1132
BsnI GGCC 5 cut(s) 360, 1159, 1261, 1287, 1331
Bso31I GGTCTC 1 cut(s) 1469
Bsp1286I GDGCHC 2 cut(s) 35, 270
Bsp143I GATC 7 cut(s) 244, 342, 675, 736, 793, 853, 1380
Bsp19I CCATGG 1 cut(s) 1455
BspACI CCGC 3 cut(s) 230, 370, 652
BspANI GGCC 5 cut(s) 360, 1159, 1261, 1287, 1331
BspCNI CTCAG 3 cut(s) 169, 1084, 1113
BspFNI CGCG 2 cut(s) 24, 26
BspHI TCATGA 1 cut(s) 475
BspLI GGNNCC 3 cut(s) 74, 494, 604
BspMAI CTGCAG 1 cut(s) 244
BspOI GCTAGC 2 cut(s) 468, 1424
BspPI GGATC 2 cut(s) 239, 350
BspT107I GGYRCC 1 cut(s) 602
BspTI CTTAAG 1 cut(s) 865
BspTNI GGTCTC 1 cut(s) 1469
BsrDI GCAATG 2 cut(s) 117, 447
BsrFI RCCGGY 1 cut(s) 1331
BsrI ACTGG 1 cut(s) 147
BssAI RCCGGY 1 cut(s) 1331
BssECI CCNNGG 2 cut(s) 978, 1455
BssMI GATC 7 cut(s) 244, 342, 675, 736, 793, 853, 1380
BssNAI GTATAC 1 cut(s) 1198
BssT1I CCWWGG 1 cut(s) 1455
Bst1107I GTATAC 1 cut(s) 1198
Bst2UI CCWGG 3 cut(s) 490, 980, 1328
Bst4CI ACNGT 2 cut(s) 130, 436
Bst6I CTCTTC 3 cut(s) 895, 1122, 1245
BstAFI CTTAAG 1 cut(s) 865
BstC8I GCNNGC 8 cut(s) 183, 187, 466, 950, 1032, 1422, 1494, 1498
BstDEI CTNAG 5 cut(s) 51, 177, 535, 1092, 1100
BstDSI CCRYGG 1 cut(s) 1455
BstF5I GGATG 6 cut(s) 112, 165, 361, 777, 1227, 1303
BstFNI CGCG 2 cut(s) 24, 26
BstHHI GCGC 1 cut(s) 26
BstKTI GATC 7 cut(s) 247, 345, 678, 739, 796, 856, 1383
BstMAI GTCTC 6 cut(s) 414, 842, 864, 897, 1088, 1469
BstMBI GATC 7 cut(s) 244, 342, 675, 736, 793, 853, 1380
BstMWI GCNNNNNNNGC 3 cut(s) 30, 638, 1328
BstNI CCWGG 3 cut(s) 490, 980, 1328
BstNSI RCATGY 3 cut(s) 189, 1364, 1496
BstPAI GACNNNNGTC 1 cut(s) 1457
BstSCI CCNGG 4 cut(s) 488, 605, 978, 1326
BstSFI CTRYAG 2 cut(s) 154, 240
BstUI CGCG 2 cut(s) 24, 26
BstV1I GCAGC 3 cut(s) 469, 1094, 1416
BstV2I GAAGAC 2 cut(s) 430, 871
BstX2I RGATCY 3 cut(s) 244, 342, 1380
BstXI CCANNNNNNTGG 3 cut(s) 256, 1269, 1475
BstYI RGATCY 3 cut(s) 244, 342, 1380
BstZ17I GTATAC 1 cut(s) 1198
BsuRI GGCC 5 cut(s) 360, 1159, 1261, 1287, 1331
BtgI CCRYGG 1 cut(s) 1455
BtsCI GGATG 6 cut(s) 112, 165, 361, 777, 1227, 1303
BtsI GCAGTG 1 cut(s) 237
BtsIMutI CAGTG 1 cut(s) 237
Cac8I GCNNGC 8 cut(s) 183, 187, 466, 950, 1032, 1422, 1494, 1498
CciI TCATGA 1 cut(s) 475
CfoI GCGC 1 cut(s) 26
Cfr10I RCCGGY 1 cut(s) 1331
Cfr13I GGNCC 1 cut(s) 1334
Csp6I GTAC 2 cut(s) 432, 603
CviQI GTAC 2 cut(s) 432, 603
DdeI CTNAG 5 cut(s) 51, 177, 535, 1092, 1100
DpnI GATC 7 cut(s) 246, 344, 677, 738, 795, 855, 1382
DpnII GATC 7 cut(s) 244, 342, 675, 736, 793, 853, 1380
DraI TTTAAA 1 cut(s) 807
EaeI YGGCCR 3 cut(s) 358, 1157, 1259
Eam1104I CTCTTC 3 cut(s) 895, 1122, 1245
EarI CTCTTC 3 cut(s) 895, 1122, 1245
Eco130I CCWWGG 1 cut(s) 1455
Eco31I GGTCTC 1 cut(s) 1469
Eco32I GATATC 2 cut(s) 508, 1153
Eco47I GGWCC 1 cut(s) 1334
Eco57I CTGAAG 1 cut(s) 409
EcoRI GAATTC 2 cut(s) 398, 784
EcoRII CCWGG 3 cut(s) 488, 978, 1326
EcoRV GATATC 2 cut(s) 508, 1153
EcoT14I CCWWGG 1 cut(s) 1455
ErhI CCWWGG 1 cut(s) 1455
FalI AAGNNNNNCTT 2 cut(s) 1041, 1073
FbaI TGATCA 2 cut(s) 736, 853
FblI GTMKAC 2 cut(s) 5, 1197
Fnu4HI GCNGC 4 cut(s) 371, 483, 1083, 1405
FokI GGATG 6 cut(s) 99, 172, 368, 764, 1234, 1310
Fsp4HI GCNGC 4 cut(s) 371, 483, 1083, 1405
FspBI CTAG 3 cut(s) 465, 572, 1421
GlaI GCGC 1 cut(s) 25
GluI GCNGC 4 cut(s) 371, 483, 1083, 1405
GsaI CCCAGC 1 cut(s) 711
HaeIII GGCC 5 cut(s) 360, 1159, 1261, 1287, 1331
HapII CCGG 4 cut(s) 123, 607, 897, 1332
HhaI GCGC 1 cut(s) 26
Hin6I GCGC 1 cut(s) 24
HinP1I GCGC 1 cut(s) 24
HincII GTYRAC 3 cut(s) 6, 148, 1444
HindII GTYRAC 3 cut(s) 6, 148, 1444
HinfI GANTC 6 cut(s) 87, 539, 905, 919, 1052, 1104
HpaI GTTAAC 1 cut(s) 1444
HpaII CCGG 4 cut(s) 123, 607, 897, 1332
HphI GGTGA 2 cut(s) 347, 1250
Hpy166II GTNNAC 5 cut(s) 6, 148, 235, 1198, 1444
Hpy188III TCNNGA 5 cut(s) 476, 550, 670, 781, 1049
Hpy8I GTNNAC 5 cut(s) 6, 148, 235, 1198, 1444
HpyAV CCTTC 4 cut(s) 54, 376, 593, 1333
HpyCH4III ACNGT 2 cut(s) 130, 436
HpyF10VI GCNNNNNNNGC 3 cut(s) 30, 638, 1328
HpyF3I CTNAG 5 cut(s) 51, 177, 535, 1092, 1100
HspAI GCGC 1 cut(s) 24
KpnI GGTACC 1 cut(s) 606
Ksp22I TGATCA 2 cut(s) 736, 853
KspAI GTTAAC 1 cut(s) 1444
Kzo9I GATC 7 cut(s) 244, 342, 675, 736, 793, 853, 1380
LmnI GCTCC 2 cut(s) 78, 629
Lsp1109I GCAGC 3 cut(s) 469, 1094, 1416
LweI GCATC 6 cut(s) 150, 382, 395, 607, 961, 1234
MaeI CTAG 3 cut(s) 465, 572, 1421
MaeIII GTNAC 1 cut(s) 335
MalI GATC 7 cut(s) 246, 344, 677, 738, 795, 855, 1382
MboI GATC 7 cut(s) 244, 342, 675, 736, 793, 853, 1380
MflI RGATCY 3 cut(s) 244, 342, 1380
MhlI GDGCHC 2 cut(s) 35, 270
MlsI TGGCCA 2 cut(s) 360, 1159
MluNI TGGCCA 2 cut(s) 360, 1159
MlyI GAGTC 3 cut(s) 899, 913, 1098
MnlI CCTC 4 cut(s) 472, 1122, 1125, 1472
Mox20I TGGCCA 2 cut(s) 360, 1159
MroXI GAANNNNTTC 1 cut(s) 1254
MscI TGGCCA 2 cut(s) 360, 1159
MslI CAYNNNNRTG 1 cut(s) 254
Msp20I TGGCCA 2 cut(s) 360, 1159
MspCI CTTAAG 1 cut(s) 865
MspI CCGG 4 cut(s) 123, 607, 897, 1332
MspR9I CCNGG 4 cut(s) 490, 607, 980, 1328
Mva1269I GAATGC 1 cut(s) 1132
MvaI CCWGG 3 cut(s) 490, 980, 1328
MvnI CGCG 2 cut(s) 24, 26
MwoI GCNNNNNNNGC 3 cut(s) 30, 638, 1328
NciI CCSGG 1 cut(s) 607
NcoI CCATGG 1 cut(s) 1455
NdeII GATC 7 cut(s) 244, 342, 675, 736, 793, 853, 1380
NheI GCTAGC 2 cut(s) 464, 1420
NlaIV GGNNCC 3 cut(s) 74, 494, 604
NmuCI GTSAC 1 cut(s) 335
NspI RCATGY 3 cut(s) 189, 1364, 1496
OliI CACNNNNGTG 1 cut(s) 254
PaeI GCATGC 2 cut(s) 189, 1496
PagI TCATGA 1 cut(s) 475
PcsI WCGNNNNNNNCGW 1 cut(s) 914
PctI GAATGC 1 cut(s) 1132
PdmI GAANNNNTTC 1 cut(s) 1254
PfeI GAWTC 3 cut(s) 87, 539, 1052
PflFI GACNNNGTC 1 cut(s) 875
PkrI GCNGC 4 cut(s) 372, 484, 1084, 1406
PleI GAGTC 3 cut(s) 899, 913, 1098
PpsI GAGTC 3 cut(s) 899, 913, 1098
PshAI GACNNNNGTC 1 cut(s) 1457
PshBI ATTAAT 2 cut(s) 731, 1044
Psp6I CCWGG 3 cut(s) 488, 978, 1326
PspFI CCCAGC 1 cut(s) 707
PspGI CCWGG 3 cut(s) 488, 978, 1326
PspN4I GGNNCC 3 cut(s) 74, 494, 604
PspPI GGNCC 1 cut(s) 1334
PstI CTGCAG 1 cut(s) 244
PsuI RGATCY 3 cut(s) 244, 342, 1380
PsyI GACNNNGTC 1 cut(s) 875
RsaI GTAC 2 cut(s) 433, 604
RsaNI GTAC 2 cut(s) 432, 603
RseI CAYNNNNRTG 1 cut(s) 254
SalI GTCGAC 1 cut(s) 4
SatI GCNGC 4 cut(s) 371, 483, 1083, 1405
Sau3AI GATC 7 cut(s) 244, 342, 675, 736, 793, 853, 1380
Sau96I GGNCC 1 cut(s) 1334
SchI GAGTC 3 cut(s) 899, 913, 1098
ScrFI CCNGG 4 cut(s) 490, 607, 980, 1328
SduI GDGCHC 2 cut(s) 35, 270
SfaNI GCATC 6 cut(s) 150, 382, 395, 607, 961, 1234
SfcI CTRYAG 2 cut(s) 154, 240
SinI GGWCC 1 cut(s) 1334
SmiI ATTTAAAT 1 cut(s) 807
SmiMI CAYNNNNRTG 1 cut(s) 254
SmlI CTYRAG 1 cut(s) 865
SmoI CTYRAG 1 cut(s) 865
SphI GCATGC 2 cut(s) 189, 1496
SsiI CCGC 3 cut(s) 230, 370, 652
SspMI CTAG 3 cut(s) 465, 572, 1421
StyD4I CCNGG 4 cut(s) 488, 605, 978, 1326
StyI CCWWGG 1 cut(s) 1455
SwaI ATTTAAAT 1 cut(s) 807
TaaI ACNGT 2 cut(s) 130, 436
TaqI TCGA 6 cut(s) 5, 47, 389, 678, 908, 1275
TaqII GACCGA 1 cut(s) 1451
TatI WGTACW 1 cut(s) 431
TauI GCSGC 1 cut(s) 373
TfiI GAWTC 3 cut(s) 87, 539, 1052
TscAI CASTG 1 cut(s) 244
TseFI GTSAC 1 cut(s) 335
TseI GCWGC 3 cut(s) 482, 1082, 1404
Tsp45I GTSAC 1 cut(s) 335
TspDTI ATGAA 9 cut(s) 464, 539, 609, 947, 1139, 1238, 1293, 1314, 1391
TspRI CASTG 1 cut(s) 244
Tth111I GACNNNGTC 1 cut(s) 875
Vha464I CTTAAG 1 cut(s) 865
VpaK11BI GGWCC 1 cut(s) 1334
VspI ATTAAT 2 cut(s) 731, 1044
XapI RAATTY 6 cut(s) 277, 398, 784, 1226, 1313, 1341
XceI RCATGY 3 cut(s) 189, 1364, 1496
XmiI GTMKAC 2 cut(s) 5, 1197
XmnI GAANNNNTTC 1 cut(s) 1254
XspI CTAG 3 cut(s) 465, 572, 1421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.