Rorug01G0390900

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000239
Physical Location & Seq
Forward (+)
50157770 .. 50162958
5189 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0390900.1

Sequence Viewer

Length: 1620 bp
ATGGCCACGCGATCCTTATGGCGCGCAAAGCTTGCTCTGTCGGCAACCGCCCTCTTCGGCGGAGCCGCGGCGGCGACTATCACCACCTCCGAAGACCCCGCCATGACTATGAAGCTCTACTCCACCGTCCCCGTCCGCCTCCTTCGCGACTCCATCACAGCCGCCGCCATCGCCTTCGATTATGAGTATTCACTGTGGGGATTGCCTGAAGGAAGCAGTGAGAGGTTAAAGGCAAAACATGAAGTTCACCTCAGGTCTGCACGTAAACTACAAGAATTATGTTTTAAAAATGGAGGAATATATATCAAGCTCGGTCAACATATTGGACAACTGGAATACTTGGTACCAGAAGAGTATGTCCGGACAATGAGAGAGTCTATGTTGAATAAATGTCCAGTTTCTTCCTATGAACAAGTGTGCGAAGTCATCGAGAGAGAGCTTGGAGATAAGCCGGATAAAATATTTTCTGAATTTGATCCTGTTCCAATAGCAAGTGCTTCTCTTGCACAAGTCCATGTTGCTCGCACACATAATGGCCAAAAAGTTGCTGTGAAGGTTCAGCATGCTCACATGACAGATACTGCAGCTGCAGATTGTGCTACTGTAGATGTGATTGTGAACACCCTCCACCGGGTTTTCCCTTCTTTTGATTATAGGTGGTTGATTGTGGAAATGCGTGAAAGTTTACCCAAGGAACTAGATTTCTTAAACGAAGCCAAGAACAGTGAGAAATGCCTGCATAATTTTCTGAAGCTTTCTCCTCGAATTGCAGCTTATGTATATGCACCAAAGGTGCATTGGAATCTAAGCACCTCAAAGTTGTTGACCATGGAATTTATCGATGGAGCACAAGTAAATGATGTCAAAACCATCAAAAAACTTGGGATCCGACCCGATGAAGTTGCGAGATTAGTTAGTGAAACTTTTGCCGAAATGATGTTCAAACATGGGTTTGTGCATTGTGACCCACATGCTGCCAACTTGATAGTTCGTCCTCTACCGTCTAGCAGAAAGAGCATTTTAGGCAAGAGAAAACCACAATTGGTACTTCTAGACCATGGTCTTTATAAAGAACTTGACGATGAGACCAGAACAAACTATGCTGCACTTTGGAAGGGATTGATATTTTCTGATGCTGATGCAATAAAGAAAAATAGTGCGAAATTAGGTGCTGGAGAGGATCTGTATGCATTATTTGCAGGAATTCTTACTATGAGGCCTTGGAATAGAGTCATTGACACATCTATTGATCACTTGGTTATACAAGGAAATGACAGTGACCGTTCAGAACTTCAGATGTATGCTTCTCAGTACTTCCCCCAAATTACAGAGCTTCTGAGGAGGCTGCCACGTGTAATTCTCTTAATGCTGAAGACTAACGATTGTTTACGATCAGTTAGCAATGCTCTGTTGCAGGAACCTTCTCTCGAGACATTCATGATTGTTGGAAGGATTTCTTCTGAAGCCATCATTGAGGCAAAACTACAAAAGAGATCCTTTTTGTCTTGGTTGAGTGCCTGGTTAGACGAAATCCAACTAGAAGCTCGGCTTTTTATAATGCGAGTAGCATTGTGGCTTCTGCGACTCAGGAAATTGTCTTGGCAGTTGGCACTGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

539

Amino Acids

61.08

Weight (kDa)

8.83

Isoelectric Point (pI)

40.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC1 PF03109 127 - 385 5.2e-82 ABC1 atypical kinase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000239)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g12320 FvH4_7g28340 FvH4_7g28350 FvH4_7g28350 FvH4_7g28361 FvH4_7g28450 FvH4_7g28450 FvH4_7g28452 FvH4_7g28453 FvH4_7g28453 FvH4_7g28454 FvH4_7g28455 FvH4_7g28458
malus_domestica MD01G1188000.v1.1 MD01G1188200.v1.1 MD02G1199800.v1.1 MD07G1191000.v1.1 MD11G1075700.v1.1 MD12G1092600.v1.1
prunus_persica Prupe.2G148800_v2.0.a1 Prupe.2G284500_v2.0.a1 Prupe.2G284800_v2.0.a1 Prupe.2G285200_v2.0.a1 Prupe.2G285200_v2.0.a1 Prupe.2G285200_v2.0.a1 Prupe.2G285200_v2.0.a1
pyrus_communis pycom02g16380 pycom11g06340
rosa_chinensis RchiOBHm_Chr1g0351121 RchiOBHm_Chr1g0359881 RchiOBHm_Chr1g0359951 RchiOBHm_Chr1g0375301 RchiOBHm_Chr1g0375441 RchiOBHm_Chr1g0375471 RchiOBHm_Chr1g0375491 RchiOBHm_Chr1g0375521 RchiOBHm_Chr1g0375531 RchiOBHm_Chr1g0375571 RchiOBHm_Chr1g0375641 RchiOBHm_Chr1g0375681 RchiOBHm_Chr1g0375701 RchiOBHm_Chr1g0375721 RchiOBHm_Chr1g0375751 RchiOBHm_Chr1g0375811 RchiOBHm_Chr1g0375831 RchiOBHm_Chr2g0116601 RchiOBHm_Chr2g0143131
rosa_laevigata RLG00000018292 RLG00000026650 RLG00000026653 RLG00000026655 RLG00000026657 RLG00000026659 RLG00000026660 RLG00000026662 RLG00000026670 RLG00000027846 RLG00000028430
rosa_multiflora Rmu_co8068694.1_g000001 Rmu_co8138120.1_g000001 Rmu_co8293475.1_g000001 Rmu_sc0000487.1_g000028 Rmu_sc0000487.1_g000030 Rmu_sc0000487.1_g000031 Rmu_sc0000487.1_g000051 Rmu_sc0000554.1_g000038 Rmu_sc0001619.1_g000015 Rmu_sc0001644.1_g000001 Rmu_sc0001644.1_g000009 Rmu_sc0001644.1_g000012 Rmu_sc0001644.1_g000013 Rmu_sc0001644.1_g000020 Rmu_sc0001644.1_g000023 Rmu_sc0001644.1_g000031 Rmu_sc0001943.1_g000001 Rmu_sc0001943.1_g000005 Rmu_sc0006087.1_g000005 Rmu_sc0008800.1_g000004 Rmu_sc0015155.1_g000001 Rmu_ssc0000106.1_g000005 Rmu_ssc0000368.1_g000003
rosa_roxburghii Rroxscaffold_2G00102100 Rroxscaffold_2G00127030 Rroxscaffold_4G00282580 Rroxscaffold_4G00282620 Rroxscaffold_4G00282650 Rroxscaffold_4G00282670 Rroxscaffold_4G00282740 Rroxscaffold_4G00282840 Rroxscaffold_4G00304050
rosa_rugosa Rorug01G0216600 Rorug01G0273300 Rorug01G0273400 Rorug01G0390900 Rorug01G0391000 Rorug01G0391400 Rorug01G0391500 Rorug01G0391600 Rorug01G0391700 Rorug01G0391800 Rorug02G0061300 Rorug02G0207800 Rorug02G0378000 Rorug02G0378100 Rorug02G0378200 Rorug02G0378300 Rorug02G0378300 Rorug02G0378300 Rorug03G0168600 Rorug06G0412800 Rorug06G0412900 Rorug06G0413000
rosa_samantha Rh1AG231000 Rh1AG287500 Rh1AG402800 Rh1CG379000 Rh2BG440100 Rh2CG417400 Rh2DG271100
rosa_wichuraiana Rw0G023590 Rw0G023600 Rw1G020080 Rw1G025530 Rw1G025540 Rw1G035580 Rw1G035650 Rw1G035670 Rw1G035690 Rw1G035700 Rw1G035740 Rw1G035760 Rw1G035780 Rw1G035800 Rw2G020700 Rw2G035250 Rw4G005840 Rw4G005850 Rw4G005860 Rw4G005890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1068, 1556
Acc65I GGTACC 1 cut(s) 343
AccB1I GGYRCC 1 cut(s) 343
AccII CGCG 4 cut(s) 10, 24, 68, 147
AccIII TCCGGA 1 cut(s) 360
AciI CCGC 9 cut(s) 48, 60, 66, 68, 71, 99, 136, 162, 165
AclWI GGATC 6 cut(s) 6, 470, 880, 893, 1188, 1488
AcoI YGGCCR 2 cut(s) 3, 535
AcsI RAATTY 3 cut(s) 470, 833, 1203
AcuI CTGAAG 5 cut(s) 228, 770, 1277, 1391, 1482
AcvI CACGTG 1 cut(s) 1352
AfaI GTAC 3 cut(s) 345, 1047, 1313
AfiI CCNNNNNNNGG 2 cut(s) 630, 631
AflIII ACRYGT 1 cut(s) 1351
AgsI TTSAA 2 cut(s) 385, 943
AjnI CCWGG 1 cut(s) 1517
AluBI AGCT 9 cut(s) 31, 115, 310, 439, 587, 754, 773, 1333, 1544
AluI AGCT 9 cut(s) 31, 115, 310, 439, 587, 754, 773, 1333, 1544
Alw21I GWGCWC 1 cut(s) 850
Alw26I GTCTC 2 cut(s) 1079, 1424
AlwI GGATC 6 cut(s) 6, 470, 880, 893, 1188, 1488
AlwNI CAGNNNCTG 1 cut(s) 581
Ama87I CYCGRG 1 cut(s) 1427
Aor13HI TCCGGA 1 cut(s) 360
AoxI GGCC 3 cut(s) 3, 535, 1217
ApeKI GCWGC 6 cut(s) 584, 587, 770, 974, 1103, 1345
ApoI RAATTY 3 cut(s) 470, 833, 1203
Asp700I GAANNNNTTC 1 cut(s) 1453
Asp718I GGTACC 1 cut(s) 343
AspLEI GCGC 2 cut(s) 24, 26
AsuC2I CCSGG 1 cut(s) 632
AsuHPI GGTGA 2 cut(s) 73, 239
AvaI CYCGRG 1 cut(s) 1427
AxyI CCTNAGG 1 cut(s) 251
BalI TGGCCA 2 cut(s) 5, 537
BamHI GGATCC 1 cut(s) 885
BanI GGYRCC 1 cut(s) 343
BbrPI CACGTG 1 cut(s) 1352
BbsI GAAGAC 2 cut(s) 99, 1379
Bbv12I GWGCWC 1 cut(s) 850
BbvI GCAGC 6 cut(s) 574, 596, 782, 961, 1090, 1332
BccI CCATC 5 cut(s) 161, 176, 836, 878, 1475
BcgI CGANNNNNNTGC 2 cut(s) 884, 918
BciT130I CCWGG 1 cut(s) 1519
BclI TGATCA 1 cut(s) 1249
BcnI CCSGG 1 cut(s) 632
BcoDI GTCTC 2 cut(s) 1079, 1424
BfaI CTAG 4 cut(s) 698, 1005, 1052, 1538
BfmI CTRYAG 3 cut(s) 582, 588, 603
BglI GCCNNNNNGGC 1 cut(s) 71
BmcAI AGTACT 1 cut(s) 1313
Bme1390I CCNGG 2 cut(s) 632, 1519
BmeT110I CYCGRG 1 cut(s) 1427
BmiI GGNNCC 4 cut(s) 64, 345, 887, 1419
BmrFI CCNGG 2 cut(s) 632, 1519
BmsI GCATC 2 cut(s) 1123, 1129
BoxI GACNNNNGTC 1 cut(s) 1059
BpiI GAAGAC 2 cut(s) 99, 1379
BpmI CTGGAG 1 cut(s) 1194
BpuMI CCSGG 1 cut(s) 632
Bsa29I ATCGAT 1 cut(s) 840
BsaAI YACGTR 2 cut(s) 263, 1352
BsaI GGTCTC 1 cut(s) 1079
BsaJI CCNNGG 5 cut(s) 66, 690, 828, 1057, 1220
BsaWI WCCGGW 1 cut(s) 360
BsaXI ACNNNNNCTCC 2 cut(s) 837, 867
Bsc4I CCNNNNNNNGG 2 cut(s) 630, 631
Bse1I ACTGG 2 cut(s) 336, 395
Bse21I CCTNAGG 1 cut(s) 251
Bse3DI GCAATG 1 cut(s) 1408
BseAI TCCGGA 1 cut(s) 360
BseBI CCWGG 1 cut(s) 1519
BseCI ATCGAT 1 cut(s) 840
BseDI CCNNGG 5 cut(s) 66, 690, 828, 1057, 1220
BseLI CCNNNNNNNGG 2 cut(s) 630, 631
BseMI GCAATG 1 cut(s) 1408
BseMII CTCAG 4 cut(s) 265, 1322, 1328, 1600
BseNI ACTGG 2 cut(s) 336, 395
BsePI GCGCGC 1 cut(s) 22
BseRI GAGGAG 2 cut(s) 750, 1354
BseXI GCAGC 6 cut(s) 574, 596, 782, 961, 1090, 1332
BsgI GTGCAG 2 cut(s) 243, 1089
Bsh1236I CGCG 4 cut(s) 10, 24, 68, 147
BshFI GGCC 3 cut(s) 5, 537, 1219
BshNI GGYRCC 1 cut(s) 343
BshVI ATCGAT 1 cut(s) 840
BsiHKAI GWGCWC 1 cut(s) 850
BsiHKCI CYCGRG 1 cut(s) 1427
BsiSI CCGG 3 cut(s) 361, 452, 631
BslFI GGGAC 1 cut(s) 113
BslI CCNNNNNNNGG 2 cut(s) 630, 631
BsmAI GTCTC 2 cut(s) 1079, 1424
BsmFI GGGAC 1 cut(s) 113
BsnI GGCC 3 cut(s) 5, 537, 1219
Bso31I GGTCTC 1 cut(s) 1079
BsoBI CYCGRG 1 cut(s) 1427
Bsp1286I GDGCHC 1 cut(s) 850
Bsp13I TCCGGA 1 cut(s) 360
Bsp143I GATC 7 cut(s) 11, 475, 885, 1180, 1249, 1391, 1493
Bsp19I CCATGG 2 cut(s) 828, 1057
Bsp68I TCGCGA 1 cut(s) 147
BspACI CCGC 9 cut(s) 48, 60, 66, 68, 71, 99, 136, 162, 165
BspANI GGCC 3 cut(s) 5, 537, 1219
BspCNI CTCAG 4 cut(s) 264, 1321, 1329, 1599
BspDI ATCGAT 1 cut(s) 840
BspEI TCCGGA 1 cut(s) 360
BspFNI CGCG 4 cut(s) 10, 24, 68, 147
BspHI TCATGA 1 cut(s) 1437
BspLI GGNNCC 4 cut(s) 64, 345, 887, 1419
BspMAI CTGCAG 2 cut(s) 586, 592
BspPI GGATC 6 cut(s) 6, 470, 880, 893, 1188, 1488
BspT107I GGYRCC 1 cut(s) 343
BspTNI GGTCTC 1 cut(s) 1079
BsrDI GCAATG 1 cut(s) 1408
BsrI ACTGG 2 cut(s) 336, 395
BssECI CCNNGG 5 cut(s) 66, 690, 828, 1057, 1220
BssHII GCGCGC 1 cut(s) 22
BssMI GATC 7 cut(s) 11, 475, 885, 1180, 1249, 1391, 1493
BssT1I CCWWGG 4 cut(s) 690, 828, 1057, 1220
Bst2UI CCWGG 1 cut(s) 1519
Bst4CI ACNGT 7 cut(s) 127, 195, 604, 725, 1002, 1277, 1283
Bst6I CTCTTC 2 cut(s) 59, 345
BstAPI GCANNNNNTGC 3 cut(s) 32, 596, 1196
BstBAI YACGTR 2 cut(s) 263, 1352
BstC8I GCNNGC 5 cut(s) 24, 33, 523, 564, 737
BstDEI CTNAG 5 cut(s) 251, 806, 1308, 1337, 1586
BstDSI CCRYGG 3 cut(s) 66, 828, 1057
BstFNI CGCG 4 cut(s) 10, 24, 68, 147
BstHHI GCGC 2 cut(s) 24, 26
BstKTI GATC 7 cut(s) 14, 478, 888, 1183, 1252, 1394, 1496
BstMAI GTCTC 2 cut(s) 1079, 1424
BstMBI GATC 7 cut(s) 11, 475, 885, 1180, 1249, 1391, 1493
BstNI CCWGG 1 cut(s) 1519
BstNSI RCATGY 2 cut(s) 566, 974
BstPAI GACNNNNGTC 1 cut(s) 1059
BstSCI CCNGG 2 cut(s) 630, 1517
BstSFI CTRYAG 3 cut(s) 582, 588, 603
BstUI CGCG 4 cut(s) 10, 24, 68, 147
BstV1I GCAGC 6 cut(s) 574, 596, 782, 961, 1090, 1332
BstV2I GAAGAC 2 cut(s) 99, 1379
BstX2I RGATCY 3 cut(s) 885, 1180, 1493
BstYI RGATCY 3 cut(s) 885, 1180, 1493
Bsu15I ATCGAT 1 cut(s) 840
Bsu36I CCTNAGG 1 cut(s) 251
BsuRI GGCC 3 cut(s) 5, 537, 1219
BsuTUI ATCGAT 1 cut(s) 840
BtgI CCRYGG 3 cut(s) 66, 828, 1057
BtgZI GCGATG 1 cut(s) 154
BtsI GCAGTG 1 cut(s) 223
BtsIMutI CAGTG 5 cut(s) 191, 223, 730, 1282, 1610
BtuMI TCGCGA 1 cut(s) 147
Cac8I GCNNGC 5 cut(s) 24, 33, 523, 564, 737
CaiI CAGNNNCTG 1 cut(s) 581
CciI TCATGA 1 cut(s) 1437
CfoI GCGC 2 cut(s) 24, 26
Cfr42I CCGCGG 1 cut(s) 69
ClaI ATCGAT 1 cut(s) 840
Csp6I GTAC 3 cut(s) 344, 1046, 1312
CviQI GTAC 3 cut(s) 344, 1046, 1312
DdeI CTNAG 5 cut(s) 251, 806, 1308, 1337, 1586
DpnI GATC 7 cut(s) 13, 477, 887, 1182, 1251, 1393, 1495
DpnII GATC 7 cut(s) 11, 475, 885, 1180, 1249, 1391, 1493
DraI TTTAAA 1 cut(s) 286
EaeI YGGCCR 2 cut(s) 3, 535
Eam1104I CTCTTC 2 cut(s) 59, 345
EarI CTCTTC 2 cut(s) 59, 345
EciI GGCGGA 2 cut(s) 75, 125
Eco130I CCWWGG 4 cut(s) 690, 828, 1057, 1220
Eco147I AGGCCT 1 cut(s) 1219
Eco31I GGTCTC 1 cut(s) 1079
Eco57I CTGAAG 5 cut(s) 228, 770, 1277, 1391, 1482
Eco72I CACGTG 1 cut(s) 1352
Eco81I CCTNAGG 1 cut(s) 251
Eco88I CYCGRG 1 cut(s) 1427
EcoRI GAATTC 1 cut(s) 1203
EcoRII CCWGG 1 cut(s) 1517
EcoT14I CCWWGG 4 cut(s) 690, 828, 1057, 1220
EcoT22I ATGCAT 1 cut(s) 1192
ErhI CCWWGG 4 cut(s) 690, 828, 1057, 1220
FalI AAGNNNNNCTT 6 cut(s) 1441, 1473, 1481, 1513, 1533, 1565
FaqI GGGAC 1 cut(s) 113
FauI CCCGC 1 cut(s) 106
FbaI TGATCA 1 cut(s) 1249
FspBI CTAG 4 cut(s) 698, 1005, 1052, 1538
GlaI GCGC 2 cut(s) 23, 25
GsuI CTGGAG 1 cut(s) 1194
HaeIII GGCC 3 cut(s) 5, 537, 1219
HapII CCGG 3 cut(s) 361, 452, 631
HhaI GCGC 2 cut(s) 24, 26
Hin6I GCGC 2 cut(s) 22, 24
HinP1I GCGC 2 cut(s) 22, 24
HincII GTYRAC 2 cut(s) 317, 825
HindII GTYRAC 2 cut(s) 317, 825
HindIII AAGCTT 2 cut(s) 29, 752
HinfI GANTC 5 cut(s) 149, 374, 802, 1230, 1584
HpaII CCGG 3 cut(s) 361, 452, 631
HphI GGTGA 2 cut(s) 73, 239
Hpy166II GTNNAC 7 cut(s) 247, 266, 317, 619, 686, 825, 1388
Hpy188I TCNGA 9 cut(s) 91, 469, 750, 890, 1132, 1288, 1296, 1338, 1462
Hpy188III TCNNGA 8 cut(s) 146, 361, 430, 1052, 1427, 1429, 1438, 1588
Hpy8I GTNNAC 7 cut(s) 247, 266, 317, 619, 686, 825, 1388
HpyAV CCTTC 8 cut(s) 152, 184, 203, 547, 651, 1108, 1431, 1443
HpyCH4III ACNGT 7 cut(s) 127, 195, 604, 725, 1002, 1277, 1283
HpyCH4IV ACGT 2 cut(s) 262, 1351
HpyF3I CTNAG 5 cut(s) 251, 806, 1308, 1337, 1586
HpySE526I ACGT 2 cut(s) 262, 1351
HspAI GCGC 2 cut(s) 22, 24
Kpn2I TCCGGA 1 cut(s) 360
KpnI GGTACC 1 cut(s) 347
Ksp22I TGATCA 1 cut(s) 1249
KspI CCGCGG 1 cut(s) 69
Kzo9I GATC 7 cut(s) 11, 475, 885, 1180, 1249, 1391, 1493
LmnI GCTCC 2 cut(s) 62, 845
Lsp1109I GCAGC 6 cut(s) 574, 596, 782, 961, 1090, 1332
LweI GCATC 2 cut(s) 1123, 1129
MaeI CTAG 4 cut(s) 698, 1005, 1052, 1538
MaeII ACGT 2 cut(s) 262, 1351
MaeIII GTNAC 2 cut(s) 962, 1277
MalI GATC 7 cut(s) 13, 477, 887, 1182, 1251, 1393, 1495
MboI GATC 7 cut(s) 11, 475, 885, 1180, 1249, 1391, 1493
MboII GAAGA 6 cut(s) 46, 104, 362, 393, 1384, 1449
MfeI CAATTG 1 cut(s) 1040
MflI RGATCY 3 cut(s) 885, 1180, 1493
MhlI GDGCHC 1 cut(s) 850
MlsI TGGCCA 2 cut(s) 5, 537
MluNI TGGCCA 2 cut(s) 5, 537
MlyI GAGTC 4 cut(s) 143, 383, 1239, 1578
MmeI TCCRAC 3 cut(s) 913, 1426, 1558
Mox20I TGGCCA 2 cut(s) 5, 537
Mph1103I ATGCAT 1 cut(s) 1192
MroI TCCGGA 1 cut(s) 360
MroXI GAANNNNTTC 1 cut(s) 1453
MscI TGGCCA 2 cut(s) 5, 537
MseI TTAA 4 cut(s) 227, 285, 707, 1364
MslI CAYNNNNRTG 1 cut(s) 107
Msp20I TGGCCA 2 cut(s) 5, 537
MspA1I CMGCKG 2 cut(s) 68, 587
MspI CCGG 3 cut(s) 361, 452, 631
MspR9I CCNGG 2 cut(s) 632, 1519
MunI CAATTG 1 cut(s) 1040
MvaI CCWGG 1 cut(s) 1519
MvnI CGCG 4 cut(s) 10, 24, 68, 147
NciI CCSGG 1 cut(s) 632
NcoI CCATGG 2 cut(s) 828, 1057
NdeII GATC 7 cut(s) 11, 475, 885, 1180, 1249, 1391, 1493
NlaIV GGNNCC 4 cut(s) 64, 345, 887, 1419
NmeAIII GCCGAG 1 cut(s) 1525
NmuCI GTSAC 2 cut(s) 962, 1277
NruI TCGCGA 1 cut(s) 147
NsiI ATGCAT 1 cut(s) 1192
NspI RCATGY 2 cut(s) 566, 974
PaeI GCATGC 1 cut(s) 566
PaeR7I CTCGAG 1 cut(s) 1427
PagI TCATGA 1 cut(s) 1437
PauI GCGCGC 1 cut(s) 22
PceI AGGCCT 1 cut(s) 1219
PdmI GAANNNNTTC 1 cut(s) 1453
PfeI GAWTC 1 cut(s) 802
PleI GAGTC 4 cut(s) 143, 382, 1238, 1578
PmaCI CACGTG 1 cut(s) 1352
PmlI CACGTG 1 cut(s) 1352
PpsI GAGTC 4 cut(s) 143, 382, 1238, 1578
Ppu21I YACGTR 2 cut(s) 263, 1352
PshAI GACNNNNGTC 1 cut(s) 1059
PsiI TTATAA 2 cut(s) 1068, 1556
Psp6I CCWGG 1 cut(s) 1517
PspCI CACGTG 1 cut(s) 1352
PspGI CCWGG 1 cut(s) 1517
PspN4I GGNNCC 4 cut(s) 64, 345, 887, 1419
PstI CTGCAG 2 cut(s) 586, 592
PstNI CAGNNNCTG 1 cut(s) 581
PsuI RGATCY 3 cut(s) 885, 1180, 1493
PteI GCGCGC 1 cut(s) 22
PvuII CAGCTG 1 cut(s) 587
RruI TCGCGA 1 cut(s) 147
RsaI GTAC 3 cut(s) 345, 1047, 1313
RsaNI GTAC 3 cut(s) 344, 1046, 1312
RseI CAYNNNNRTG 1 cut(s) 107
SacII CCGCGG 1 cut(s) 69
SaqAI TTAA 4 cut(s) 227, 285, 707, 1364
Sau3AI GATC 7 cut(s) 11, 475, 885, 1180, 1249, 1391, 1493
ScaI AGTACT 1 cut(s) 1313
SchI GAGTC 4 cut(s) 143, 383, 1239, 1578
ScrFI CCNGG 2 cut(s) 632, 1519
SduI GDGCHC 1 cut(s) 850
SfaNI GCATC 2 cut(s) 1123, 1129
SfcI CTRYAG 3 cut(s) 582, 588, 603
Sfr274I CTCGAG 1 cut(s) 1427
Sfr303I CCGCGG 1 cut(s) 69
SgrBI CCGCGG 1 cut(s) 69
SlaI CTCGAG 1 cut(s) 1427
SmiMI CAYNNNNRTG 1 cut(s) 107
SmlI CTYRAG 1 cut(s) 1427
SmoI CTYRAG 1 cut(s) 1427
SphI GCATGC 1 cut(s) 566
SseBI AGGCCT 1 cut(s) 1219
SsiI CCGC 9 cut(s) 48, 60, 66, 68, 71, 99, 136, 162, 165
SspI AATATT 1 cut(s) 462
SspMI CTAG 4 cut(s) 698, 1005, 1052, 1538
StuI AGGCCT 1 cut(s) 1219
StyD4I CCNGG 2 cut(s) 630, 1517
StyI CCWWGG 4 cut(s) 690, 828, 1057, 1220
TaaI ACNGT 7 cut(s) 127, 195, 604, 725, 1002, 1277, 1283
TaiI ACGT 2 cut(s) 265, 1354
TaqI TCGA 5 cut(s) 177, 429, 763, 840, 1428
TaqII GACCGA 1 cut(s) 302
TatI WGTACW 1 cut(s) 1311
TauI GCSGC 5 cut(s) 68, 71, 74, 164, 167
TfiI GAWTC 1 cut(s) 802
Tru1I TTAA 4 cut(s) 227, 285, 707, 1364
Tru9I TTAA 4 cut(s) 227, 285, 707, 1364
TscAI CASTG 5 cut(s) 198, 223, 730, 1282, 1617
TseFI GTSAC 2 cut(s) 962, 1277
TseI GCWGC 6 cut(s) 584, 587, 770, 974, 1103, 1345
Tsp45I GTSAC 2 cut(s) 962, 1277
TspDTI ATGAA 5 cut(s) 125, 255, 423, 912, 1426
TspRI CASTG 5 cut(s) 198, 223, 730, 1282, 1617
XapI RAATTY 3 cut(s) 470, 833, 1203
XbaI TCTAGA 1 cut(s) 1051
XceI RCATGY 2 cut(s) 566, 974
XcmI CCANNNNNNNNNTGG 1 cut(s) 795
XhoI CTCGAG 1 cut(s) 1427
XmnI GAANNNNTTC 1 cut(s) 1453
XspI CTAG 4 cut(s) 698, 1005, 1052, 1538
ZrmI AGTACT 1 cut(s) 1313
Zsp2I ATGCAT 1 cut(s) 1192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.