Rorug06G0412900

cytochrome P450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000239
Physical Location & Seq
Reverse (-)
55411884 .. 55416045
4162 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0412900.1

Sequence Viewer

Length: 1968 bp
ATGTCCACATCCTCAGCCCGAGCACGGCTGGCTCTCATAGCCCTCCTCTCCGCCACCACGTTCTACTGTTTCTACAAATCTCGCCGCCTCAAGCAACTCTCCCTAAACCCTAACCCTAGCTCCTCTCCGCCTCGCAAAGGCAAGCTCTTCTTCATTTCCCAAACCGGAACCTCCAAAGCCCTAGCTCAGCGTCTTCTCGAACTTCTAGCCTCCAATGGCCTCGCCTTCGAGCTCGTCGACCCTAGCAGCTACGAGCCAGAGGACCTCCCCAAGGAAACCCTAGTCCTGATCGTCGCTTCCACCTGGGACGATGGACAACCGCCTTCGAGCGCCAAGTTCTTCACCAATTGGCTCGCGGAGAGCGCCGAGGACTTCAGAGTGGGGTCCATGCTGCTATCGCAGTGCAGATTCTCGGTGTTCGGCGTCGGAAGCCGAGCCTACGGTGCGTCGTTCAATGCGGTGGGGAGGGACTTGTCGAAGTGGATGAGGGCGTTGGGCGCCGCCGAGATATTGCCGGTTTGGGAAGGTGACGTGGACGACGGGGACATAGACCAGGTCTTTGAGGCTTGGAGTGGTAAGCTGATGAGGTTTTTGAAGGGCGGTGTGGCCGAAAACGGTGTCGCTTTGGGTAATGGTGTTGGTGCTGGTGCTGGTGCTGAAGGTGAAGCTGAGTATTCTGACGTGTCAGATTATGATGAGGAGGAGGTGGAAGATGAGGAGGAGGAGGAGGAGGAGGAGTCTGGGGTTGTTGATCTTGAGGACATTGCAGGTAAAGCACCTTCAAGGGGGACGGTGACGGTGGCTAAGACTAAGACTAAGACCAATGGGATAGTGAATGGTAAAAGAGATATGGTCACTCCGGTGATTCGTGCCAGCTTAGAGAAGCAGGGTTACAAAATTATTGGTTCGCATAGTGGTGTCAAAATTTGTAGATGGACAAAGTCACAGCTTAGAGGCCGAGGTGGTTGCTATAAACACTCGTTTTATGGCATTGAAAGTCATAGGTGTATGGAGGCAACCCCTAGTTTGGCATGTGCCAATAAATGTGTTTTCTGTTGGAGACATCATACAAACCCTGTTGGAAAGAGTTGGCAGTGGAAGATGGACGATCCATTAGAGATTGTGAATACTGCCATAGACCTGCACAGTAAGATGATTAAGCAAATGAAAGGAGTTCCTGGAGTTACATTGGAGCGATTAACAGAGGGTCTCTCTCCCAGGCATTGTGCCTTGTCACTTGTTGGTGAACCTATTATGTATCCAGAGATTAATACACTAGTAGATGAGCTGCATCGTAGACGGATTTCTACTTTTCTAGTGACAAATGCTCAATTTCCTGAAAAAATTAGAATGCTGAAACCTATTACACAGTTATATGTAAGTGTGGATGCTGCAACTAAAGAGAGTTTGAAGGCAATTGACAGGCCACTTTTTGGAGATTTTTGGGAGCGATTTATTGATTCCTTGGAAGCTCTCAAGGAAAAACAGCAGCGAACTGTTTATCGCTTAACTTTGGTCAAGGGATGGAATACAGAAGAAATTGAGGCTTATTATAACATCTTTAGCATTGGTAACCCCGATTTTGTTGAAATCAAAGGAGTTACATATTGTGGATCGTCTGCTACCTCAAAGTTGACGATGGAGAATGTGCCCTGGCATGCTGATGTTAAAGCTTTTTCAGAGGCCTTGGCTTTGAGAAGTAACGGCGAGTATGAGGTGGCATGTGAGCATGTCCACTCATGTTGTGTCCTCCTGGCAAAAACTAAAAAGTTCAAGATCAATGGGCAGTGGTTCACATGGATAGACTATGAAAAGTTTCATGATCTGGTGGCTTCTGGAAAACCCTTTGACAGTAATGATTATATGGCTGCCACACCTTCATGGGCTGTTTATGGGGCAGTTGAAGGTGGATTTGATCCCTATCAATCTCGATATAGGAAGGAGCGACATCACAGATCAAACCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

655

Amino Acids

73.04

Weight (kDa)

6.05

Isoelectric Point (pI)

37.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Flavodoxin_1 PF00258 49 - 190 4.8e-27 Flavodoxin
Radical_SAM PF04055 343 - 518 1.7e-16 Radical SAM superfamily
Wyosine_form PF08608 524 - 587 9.5e-24 Wyosine base formation
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000239)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g12320 FvH4_7g28340 FvH4_7g28350 FvH4_7g28350 FvH4_7g28361 FvH4_7g28450 FvH4_7g28450 FvH4_7g28452 FvH4_7g28453 FvH4_7g28453 FvH4_7g28454 FvH4_7g28455 FvH4_7g28458
malus_domestica MD01G1188000.v1.1 MD01G1188200.v1.1 MD02G1199800.v1.1 MD07G1191000.v1.1 MD11G1075700.v1.1 MD12G1092600.v1.1
prunus_persica Prupe.2G148800_v2.0.a1 Prupe.2G284500_v2.0.a1 Prupe.2G284800_v2.0.a1 Prupe.2G285200_v2.0.a1 Prupe.2G285200_v2.0.a1 Prupe.2G285200_v2.0.a1 Prupe.2G285200_v2.0.a1
pyrus_communis pycom02g16380 pycom11g06340
rosa_chinensis RchiOBHm_Chr1g0351121 RchiOBHm_Chr1g0359881 RchiOBHm_Chr1g0359951 RchiOBHm_Chr1g0375301 RchiOBHm_Chr1g0375441 RchiOBHm_Chr1g0375471 RchiOBHm_Chr1g0375491 RchiOBHm_Chr1g0375521 RchiOBHm_Chr1g0375531 RchiOBHm_Chr1g0375571 RchiOBHm_Chr1g0375641 RchiOBHm_Chr1g0375681 RchiOBHm_Chr1g0375701 RchiOBHm_Chr1g0375721 RchiOBHm_Chr1g0375751 RchiOBHm_Chr1g0375811 RchiOBHm_Chr1g0375831 RchiOBHm_Chr2g0116601 RchiOBHm_Chr2g0143131
rosa_laevigata RLG00000018292 RLG00000026650 RLG00000026653 RLG00000026655 RLG00000026657 RLG00000026659 RLG00000026660 RLG00000026662 RLG00000026670 RLG00000027846 RLG00000028430
rosa_multiflora Rmu_co8068694.1_g000001 Rmu_co8138120.1_g000001 Rmu_co8293475.1_g000001 Rmu_sc0000487.1_g000028 Rmu_sc0000487.1_g000030 Rmu_sc0000487.1_g000031 Rmu_sc0000487.1_g000051 Rmu_sc0000554.1_g000038 Rmu_sc0001619.1_g000015 Rmu_sc0001644.1_g000001 Rmu_sc0001644.1_g000009 Rmu_sc0001644.1_g000012 Rmu_sc0001644.1_g000013 Rmu_sc0001644.1_g000020 Rmu_sc0001644.1_g000023 Rmu_sc0001644.1_g000031 Rmu_sc0001943.1_g000001 Rmu_sc0001943.1_g000005 Rmu_sc0006087.1_g000005 Rmu_sc0008800.1_g000004 Rmu_sc0015155.1_g000001 Rmu_ssc0000106.1_g000005 Rmu_ssc0000368.1_g000003
rosa_roxburghii Rroxscaffold_2G00102100 Rroxscaffold_2G00127030 Rroxscaffold_4G00282580 Rroxscaffold_4G00282620 Rroxscaffold_4G00282650 Rroxscaffold_4G00282670 Rroxscaffold_4G00282740 Rroxscaffold_4G00282840 Rroxscaffold_4G00304050
rosa_rugosa Rorug01G0216600 Rorug01G0273300 Rorug01G0273400 Rorug01G0390900 Rorug01G0391000 Rorug01G0391400 Rorug01G0391500 Rorug01G0391600 Rorug01G0391700 Rorug01G0391800 Rorug02G0061300 Rorug02G0207800 Rorug02G0378000 Rorug02G0378100 Rorug02G0378200 Rorug02G0378300 Rorug02G0378300 Rorug02G0378300 Rorug03G0168600 Rorug06G0412800 Rorug06G0412900 Rorug06G0413000
rosa_samantha Rh1AG231000 Rh1AG287500 Rh1AG402800 Rh1CG379000 Rh2BG440100 Rh2CG417400 Rh2DG271100
rosa_wichuraiana Rw0G023590 Rw0G023600 Rw1G020080 Rw1G025530 Rw1G025540 Rw1G035580 Rw1G035650 Rw1G035670 Rw1G035690 Rw1G035700 Rw1G035740 Rw1G035760 Rw1G035780 Rw1G035800 Rw2G020700 Rw2G035250 Rw4G005840 Rw4G005850 Rw4G005860 Rw4G005890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1554
Acc36I ACCTGC 2 cut(s) 758, 1149
AccB1I GGYRCC 1 cut(s) 497
AccB7I CCANNNNNTGG 1 cut(s) 1433
AccI GTMKAC 2 cut(s) 237, 1297
AccII CGCG 1 cut(s) 356
AciI CCGC 8 cut(s) 51, 85, 128, 320, 356, 458, 501, 600
AclWI GGATC 3 cut(s) 1103, 1621, 1910
AcoI YGGCCR 1 cut(s) 606
AcsI RAATTY 1 cut(s) 924
AcuI CTGAAG 2 cut(s) 358, 678
AcyI GRCGYC 2 cut(s) 423, 498
AfiI CCNNNNNNNGG 6 cut(s) 24, 137, 271, 785, 1027, 1433
AflIII ACRYGT 1 cut(s) 681
AgsI TTSAA 8 cut(s) 454, 595, 783, 995, 1411, 1589, 1774, 1904
AhlI ACTAGT 1 cut(s) 1276
AjiI CACGTC 2 cut(s) 532, 682
AjnI CCWGG 6 cut(s) 302, 552, 1177, 1217, 1652, 1752
AleI CACNNNNGTG 1 cut(s) 860
Alw21I GWGCWC 2 cut(s) 25, 234
Alw26I GTCTC 2 cut(s) 1054, 1214
AlwI GGATC 3 cut(s) 1103, 1621, 1910
Ama87I CYCGRG 1 cut(s) 18
AoxI GGCC 5 cut(s) 217, 606, 955, 1424, 1683
ApeKI GCWGC 6 cut(s) 246, 391, 1288, 1391, 1489, 1868
ApoI RAATTY 1 cut(s) 924
ArsI GACNNNNNNTTYG 4 cut(s) 542, 574, 603, 635
AseI ATTAAT 1 cut(s) 1269
Asp700I GAANNNNTTC 1 cut(s) 1815
AspLEI GCGC 3 cut(s) 332, 365, 500
AspS9I GGNCC 2 cut(s) 262, 384
AsuHPI GGTGA 6 cut(s) 334, 539, 674, 805, 874, 1256
AvaI CYCGRG 1 cut(s) 18
AvaII GGWCC 2 cut(s) 262, 384
BaeGI GKGCMC 1 cut(s) 1653
BanI GGYRCC 1 cut(s) 497
BanII GRGCYC 1 cut(s) 234
BarI GAAGNNNNNNTAC 4 cut(s) 763, 795, 875, 907
BbsI GAAGAC 1 cut(s) 185
Bbv12I GWGCWC 2 cut(s) 25, 234
BbvCI CCTCAGC 1 cut(s) 13
BbvI GCAGC 6 cut(s) 258, 378, 1275, 1378, 1501, 1855
BccI CCATC 5 cut(s) 305, 927, 1096, 1518, 1633
BceAI ACGGC 2 cut(s) 41, 1720
BcgI CGANNNNNNTGC 2 cut(s) 948, 982
BciT130I CCWGG 6 cut(s) 304, 554, 1179, 1219, 1654, 1754
BciVI GTATCC 1 cut(s) 1269
BcoDI GTCTC 2 cut(s) 1054, 1214
BcuI ACTAGT 1 cut(s) 1276
BfaI CTAG 8 cut(s) 117, 182, 206, 243, 281, 1023, 1277, 1316
BfoI RGCGCY 3 cut(s) 333, 366, 501
BfuAI ACCTGC 2 cut(s) 758, 1149
BfuI GTATCC 1 cut(s) 1269
BisI GCNGC 8 cut(s) 85, 247, 392, 501, 1289, 1392, 1490, 1869
BlpI GCTNAGC 1 cut(s) 186
BlsI GCNGC 8 cut(s) 86, 248, 393, 502, 1290, 1393, 1491, 1870
Bme1390I CCNGG 6 cut(s) 304, 554, 1179, 1219, 1654, 1754
Bme18I GGWCC 2 cut(s) 262, 384
BmeT110I CYCGRG 1 cut(s) 18
BmgBI CACGTC 2 cut(s) 532, 682
BmgT120I GGNCC 2 cut(s) 262, 384
BmiI GGNNCC 3 cut(s) 169, 385, 499
BmrFI CCNGG 6 cut(s) 304, 554, 1179, 1219, 1654, 1754
BmsI GCATC 2 cut(s) 1300, 1378
BpiI GAAGAC 1 cut(s) 185
BplI GAGNNNNNCTC 2 cut(s) 1196, 1228
BpmI CTGGAG 1 cut(s) 1200
Bpu10I CCTNAGC 1 cut(s) 13
Bpu1102I GCTNAGC 1 cut(s) 186
BpuEI CTTGAG 3 cut(s) 74, 776, 1460
BsaBI GATNNNNATC 1 cut(s) 1920
BsaHI GRCGYC 2 cut(s) 423, 498
BsaI GGTCTC 1 cut(s) 1214
BsaJI CCNNGG 8 cut(s) 270, 303, 366, 958, 1217, 1464, 1652, 1686
BsaWI WCCGGW 2 cut(s) 164, 859
BsaXI ACNNNNNCTCC 4 cut(s) 104, 134, 722, 752
Bsc4I CCNNNNNNNGG 6 cut(s) 24, 137, 271, 785, 1027, 1433
Bse118I RCCGGY 1 cut(s) 514
Bse1I ACTGG 1 cut(s) 1963
Bse3DI GCAATG 1 cut(s) 762
Bse8I GATNNNNATC 1 cut(s) 1920
BseBI CCWGG 6 cut(s) 304, 554, 1179, 1219, 1654, 1754
BseDI CCNNGG 8 cut(s) 270, 303, 366, 958, 1217, 1464, 1652, 1686
BseGI GGATG 4 cut(s) 8, 489, 1393, 1529
BseJI GATNNNNATC 1 cut(s) 1920
BseLI CCNNNNNNNGG 6 cut(s) 24, 137, 271, 785, 1027, 1433
BseMI GCAATG 1 cut(s) 762
BseMII CTCAG 3 cut(s) 27, 200, 660
BseNI ACTGG 1 cut(s) 1963
BseSI GKGCMC 1 cut(s) 1653
BseXI GCAGC 6 cut(s) 258, 378, 1275, 1378, 1501, 1855
BsgI GTGCAG 2 cut(s) 424, 1127
Bsh1236I CGCG 1 cut(s) 356
BshFI GGCC 5 cut(s) 219, 608, 957, 1426, 1685
BshNI GGYRCC 1 cut(s) 497
BsiHKAI GWGCWC 2 cut(s) 25, 234
BsiHKCI CYCGRG 1 cut(s) 18
BsiSI CCGG 3 cut(s) 165, 515, 860
BslFI GGGAC 4 cut(s) 320, 482, 557, 802
BslI CCNNNNNNNGG 6 cut(s) 24, 137, 271, 785, 1027, 1433
BsmAI GTCTC 2 cut(s) 1054, 1214
BsmFI GGGAC 4 cut(s) 320, 482, 557, 802
BsmI GAATGC 1 cut(s) 1356
BsnI GGCC 5 cut(s) 219, 608, 957, 1426, 1685
Bso31I GGTCTC 1 cut(s) 1214
BsoBI CYCGRG 1 cut(s) 18
Bsp1286I GDGCHC 3 cut(s) 25, 234, 1653
Bsp143I GATC 8 cut(s) 288, 751, 1108, 1613, 1776, 1822, 1915, 1955
Bsp1720I GCTNAGC 1 cut(s) 186
BspACI CCGC 8 cut(s) 51, 85, 128, 320, 356, 458, 501, 600
BspANI GGCC 5 cut(s) 219, 608, 957, 1426, 1685
BspCNI CTCAG 3 cut(s) 26, 199, 661
BspFNI CGCG 1 cut(s) 356
BspHI TCATGA 1 cut(s) 1819
BspLI GGNNCC 3 cut(s) 169, 385, 499
BspMI ACCTGC 2 cut(s) 758, 1149
BspPI GGATC 3 cut(s) 1103, 1621, 1910
BspQI GCTCTTC 1 cut(s) 152
BspT107I GGYRCC 1 cut(s) 497
BspTNI GGTCTC 1 cut(s) 1214
BsrDI GCAATG 1 cut(s) 762
BsrFI RCCGGY 1 cut(s) 514
BsrI ACTGG 1 cut(s) 1963
BssAI RCCGGY 1 cut(s) 514
BssECI CCNNGG 8 cut(s) 270, 303, 366, 958, 1217, 1464, 1652, 1686
BssMI GATC 8 cut(s) 288, 751, 1108, 1613, 1776, 1822, 1915, 1955
BssNI GRCGYC 2 cut(s) 423, 498
BssT1I CCWWGG 3 cut(s) 270, 1464, 1686
Bst2UI CCWGG 6 cut(s) 304, 554, 1179, 1219, 1654, 1754
Bst4CI ACNGT 9 cut(s) 68, 443, 617, 793, 799, 1148, 1371, 1498, 1853
Bst6I CTCTTC 1 cut(s) 152
BstACI GRCGYC 2 cut(s) 423, 498
BstC8I GCNNGC 5 cut(s) 30, 143, 354, 874, 1659
BstDEI CTNAG 8 cut(s) 13, 186, 669, 804, 810, 816, 877, 950
BstEII GGTNACC 1 cut(s) 1571
BstENI CCTNNNNNAGG 2 cut(s) 135, 269
BstF5I GGATG 4 cut(s) 8, 489, 1393, 1529
BstFNI CGCG 1 cut(s) 356
BstH2I RGCGCY 3 cut(s) 333, 366, 501
BstHHI GCGC 3 cut(s) 332, 365, 500
BstKTI GATC 8 cut(s) 291, 754, 1111, 1616, 1779, 1825, 1918, 1958
BstMAI GTCTC 2 cut(s) 1054, 1214
BstMBI GATC 8 cut(s) 288, 751, 1108, 1613, 1776, 1822, 1915, 1955
BstMWI GCNNNNNNNGC 8 cut(s) 29, 38, 362, 397, 429, 443, 497, 773
BstNI CCWGG 6 cut(s) 304, 554, 1179, 1219, 1654, 1754
BstNSI RCATGY 4 cut(s) 1035, 1661, 1725, 1733
BstPI GGTNACC 1 cut(s) 1571
BstSCI CCNGG 6 cut(s) 302, 552, 1177, 1217, 1652, 1752
BstSLI GKGCMC 1 cut(s) 1653
BstUI CGCG 1 cut(s) 356
BstV1I GCAGC 6 cut(s) 258, 378, 1275, 1378, 1501, 1855
BstV2I GAAGAC 1 cut(s) 185
BsuI GTATCC 1 cut(s) 1269
BsuRI GGCC 5 cut(s) 219, 608, 957, 1426, 1685
BtrI CACGTC 2 cut(s) 532, 682
BtsCI GGATG 4 cut(s) 8, 489, 1393, 1529
BtsI GCAGTG 3 cut(s) 407, 1100, 1793
BtsIMutI CAGTG 3 cut(s) 407, 1100, 1793
BveI ACCTGC 2 cut(s) 758, 1149
Cac8I GCNNGC 5 cut(s) 30, 143, 354, 874, 1659
CciI TCATGA 1 cut(s) 1819
CfoI GCGC 3 cut(s) 332, 365, 500
Cfr10I RCCGGY 1 cut(s) 514
Cfr13I GGNCC 2 cut(s) 262, 384
CseI GACGC 3 cut(s) 179, 412, 435
CsiI ACCWGGT 1 cut(s) 552
CspCI CAANNNNNGTGG 2 cut(s) 1724, 1759
CviAII CATG 9 cut(s) 388, 1032, 1658, 1722, 1730, 1740, 1797, 1820, 1881
DdeI CTNAG 8 cut(s) 13, 186, 669, 804, 810, 816, 877, 950
DinI GGCGCC 1 cut(s) 499
DpnI GATC 8 cut(s) 290, 753, 1110, 1615, 1778, 1824, 1917, 1957
DpnII GATC 8 cut(s) 288, 751, 1108, 1613, 1776, 1822, 1915, 1955
EaeI YGGCCR 1 cut(s) 606
Eam1104I CTCTTC 1 cut(s) 152
EarI CTCTTC 1 cut(s) 152
EciI GGCGGA 2 cut(s) 40, 117
Ecl136II GAGCTC 1 cut(s) 232
Eco130I CCWWGG 3 cut(s) 270, 1464, 1686
Eco147I AGGCCT 1 cut(s) 1685
Eco24I GRGCYC 1 cut(s) 234
Eco31I GGTCTC 1 cut(s) 1214
Eco47I GGWCC 2 cut(s) 262, 384
Eco53kI GAGCTC 1 cut(s) 232
Eco57I CTGAAG 2 cut(s) 358, 678
Eco88I CYCGRG 1 cut(s) 18
Eco91I GGTNACC 1 cut(s) 1571
EcoICRI GAGCTC 1 cut(s) 232
EcoNI CCTNNNNNAGG 2 cut(s) 135, 269
EcoO109I RGGNCCY 1 cut(s) 262
EcoO65I GGTNACC 1 cut(s) 1571
EcoRII CCWGG 6 cut(s) 302, 552, 1177, 1217, 1652, 1752
EcoT14I CCWWGG 3 cut(s) 270, 1464, 1686
EcoT38I GRGCYC 1 cut(s) 234
EgeI GGCGCC 1 cut(s) 499
EheI GGCGCC 1 cut(s) 499
ErhI CCWWGG 3 cut(s) 270, 1464, 1686
FaeI CATG 9 cut(s) 391, 1035, 1661, 1725, 1733, 1743, 1800, 1823, 1884
FalI AAGNNNNNCTT 2 cut(s) 134, 166
FaqI GGGAC 4 cut(s) 320, 482, 557, 802
FatI CATG 9 cut(s) 387, 1031, 1657, 1721, 1729, 1739, 1796, 1819, 1880
FblI GTMKAC 2 cut(s) 237, 1297
Fnu4HI GCNGC 8 cut(s) 85, 247, 392, 501, 1289, 1392, 1490, 1869
FokI GGATG 3 cut(s) 496, 1400, 1536
FriOI GRGCYC 1 cut(s) 234
Fsp4HI GCNGC 8 cut(s) 85, 247, 392, 501, 1289, 1392, 1490, 1869
FspBI CTAG 8 cut(s) 117, 182, 206, 243, 281, 1023, 1277, 1316
GlaI GCGC 3 cut(s) 331, 364, 499
GluI GCNGC 8 cut(s) 85, 247, 392, 501, 1289, 1392, 1490, 1869
GsuI CTGGAG 1 cut(s) 1200
HaeII RGCGCY 3 cut(s) 333, 366, 501
HaeIII GGCC 5 cut(s) 219, 608, 957, 1426, 1685
HapII CCGG 3 cut(s) 165, 515, 860
HgaI GACGC 3 cut(s) 179, 412, 435
HhaI GCGC 3 cut(s) 332, 365, 500
Hin1I GRCGYC 2 cut(s) 423, 498
Hin1II CATG 9 cut(s) 391, 1035, 1661, 1725, 1733, 1743, 1800, 1823, 1884
Hin6I GCGC 3 cut(s) 330, 363, 498
HinP1I GCGC 3 cut(s) 330, 363, 498
HincII GTYRAC 2 cut(s) 238, 1635
HindII GTYRAC 2 cut(s) 238, 1635
HindIII AAGCTT 1 cut(s) 1671
HinfI GANTC 4 cut(s) 408, 737, 865, 1460
HpaII CCGG 3 cut(s) 165, 515, 860
HphI GGTGA 6 cut(s) 334, 539, 674, 805, 874, 1256
Hpy166II GTNNAC 8 cut(s) 6, 238, 535, 1247, 1298, 1635, 1735, 1794
Hpy188I TCNGA 5 cut(s) 377, 428, 679, 688, 1681
Hpy188III TCNNGA 9 cut(s) 197, 286, 755, 1262, 1337, 1774, 1820, 1836, 1929
Hpy8I GTNNAC 8 cut(s) 6, 238, 535, 1247, 1298, 1635, 1735, 1794
Hpy99I CGWCG 5 cut(s) 239, 296, 428, 451, 542
HpyCH4III ACNGT 9 cut(s) 68, 443, 617, 793, 799, 1148, 1371, 1498, 1853
HpyCH4IV ACGT 3 cut(s) 59, 531, 681
HpyCH4V TGCA 5 cut(s) 405, 767, 1144, 1291, 1394
HpyF10VI GCNNNNNNNGC 8 cut(s) 29, 38, 362, 397, 429, 443, 497, 773
HpyF3I CTNAG 8 cut(s) 13, 186, 669, 804, 810, 816, 877, 950
HpySE526I ACGT 3 cut(s) 59, 531, 681
Hsp92I GRCGYC 2 cut(s) 423, 498
Hsp92II CATG 9 cut(s) 391, 1035, 1661, 1725, 1733, 1743, 1800, 1823, 1884
HspAI GCGC 3 cut(s) 330, 363, 498
KasI GGCGCC 1 cut(s) 497
Kzo9I GATC 8 cut(s) 288, 751, 1108, 1613, 1776, 1822, 1915, 1955
LguI GCTCTTC 1 cut(s) 152
LmnI GCTCC 4 cut(s) 125, 1192, 1447, 1942
Lsp1109I GCAGC 6 cut(s) 258, 378, 1275, 1378, 1501, 1855
LweI GCATC 2 cut(s) 1300, 1378
MabI ACCWGGT 1 cut(s) 552
MaeI CTAG 8 cut(s) 117, 182, 206, 243, 281, 1023, 1277, 1316
MaeII ACGT 3 cut(s) 59, 531, 681
MalI GATC 8 cut(s) 290, 753, 1110, 1615, 1778, 1824, 1917, 1957
MboI GATC 8 cut(s) 288, 751, 1108, 1613, 1776, 1822, 1915, 1955
MboII GAAGA 7 cut(s) 139, 142, 185, 331, 722, 1111, 1547
MfeI CAATTG 2 cut(s) 346, 1416
MhlI GDGCHC 3 cut(s) 25, 234, 1653
MluCI AATT 7 cut(s) 346, 897, 924, 1331, 1344, 1416, 1539
Mly113I GGCGCC 1 cut(s) 498
MlyI GAGTC 1 cut(s) 746
MmeI TCCRAC 3 cut(s) 406, 1037, 1060
MroXI GAANNNNTTC 1 cut(s) 1815
MseI TTAA 5 cut(s) 1158, 1199, 1269, 1508, 1668
MslI CAYNNNNRTG 4 cut(s) 860, 915, 1662, 1879
MspI CCGG 3 cut(s) 165, 515, 860
MspR9I CCNGG 6 cut(s) 304, 554, 1179, 1219, 1654, 1754
MunI CAATTG 2 cut(s) 346, 1416
Mva1269I GAATGC 1 cut(s) 1356
MvaI CCWGG 6 cut(s) 304, 554, 1179, 1219, 1654, 1754
MvnI CGCG 1 cut(s) 356
MwoI GCNNNNNNNGC 8 cut(s) 29, 38, 362, 397, 429, 443, 497, 773
NarI GGCGCC 1 cut(s) 498
NdeII GATC 8 cut(s) 288, 751, 1108, 1613, 1776, 1822, 1915, 1955
NlaIII CATG 9 cut(s) 391, 1035, 1661, 1725, 1733, 1743, 1800, 1823, 1884
NlaIV GGNNCC 3 cut(s) 169, 385, 499
NmeAIII GCCGAG 4 cut(s) 391, 458, 529, 983
NmuCI GTSAC 6 cut(s) 527, 793, 853, 942, 1233, 1318
NspI RCATGY 4 cut(s) 1035, 1661, 1725, 1733
OliI CACNNNNGTG 1 cut(s) 860
PaeI GCATGC 1 cut(s) 1661
PagI TCATGA 1 cut(s) 1819
PceI AGGCCT 1 cut(s) 1685
PciSI GCTCTTC 1 cut(s) 152
PcsI WCGNNNNNNNCGW 1 cut(s) 234
PctI GAATGC 1 cut(s) 1356
PdmI GAANNNNTTC 1 cut(s) 1815
PfeI GAWTC 3 cut(s) 408, 865, 1460
PflFI GACNNNGTC 2 cut(s) 554, 940
PflMI CCANNNNNTGG 1 cut(s) 1433
PfoI TCCNGGA 1 cut(s) 1177
PkrI GCNGC 8 cut(s) 86, 248, 393, 502, 1290, 1393, 1491, 1870
PleI GAGTC 1 cut(s) 745
PluTI GGCGCC 1 cut(s) 501
PpsI GAGTC 1 cut(s) 745
PpuMI RGGWCCY 1 cut(s) 262
PshBI ATTAAT 1 cut(s) 1269
PsiI TTATAA 1 cut(s) 1554
Psp124BI GAGCTC 1 cut(s) 234
Psp5II RGGWCCY 1 cut(s) 262
Psp6I CCWGG 6 cut(s) 302, 552, 1177, 1217, 1652, 1752
PspEI GGTNACC 1 cut(s) 1571
PspGI CCWGG 6 cut(s) 302, 552, 1177, 1217, 1652, 1752
PspN4I GGNNCC 3 cut(s) 169, 385, 499
PspPI GGNCC 2 cut(s) 262, 384
PspPPI RGGWCCY 1 cut(s) 262
PsyI GACNNNGTC 2 cut(s) 554, 940
RseI CAYNNNNRTG 4 cut(s) 860, 915, 1662, 1879
SacI GAGCTC 1 cut(s) 234
SalI GTCGAC 1 cut(s) 236
SapI GCTCTTC 1 cut(s) 152
SaqAI TTAA 5 cut(s) 1158, 1199, 1269, 1508, 1668
SatI GCNGC 8 cut(s) 85, 247, 392, 501, 1289, 1392, 1490, 1869
Sau3AI GATC 8 cut(s) 288, 751, 1108, 1613, 1776, 1822, 1915, 1955
Sau96I GGNCC 2 cut(s) 262, 384
SchI GAGTC 1 cut(s) 746
ScrFI CCNGG 6 cut(s) 304, 554, 1179, 1219, 1654, 1754
SduI GDGCHC 3 cut(s) 25, 234, 1653
SexAI ACCWGGT 1 cut(s) 552
SfaNI GCATC 2 cut(s) 1300, 1378
SfoI GGCGCC 1 cut(s) 499
SinI GGWCC 2 cut(s) 262, 384
SmiMI CAYNNNNRTG 4 cut(s) 860, 915, 1662, 1879
SmlI CTYRAG 3 cut(s) 89, 755, 1475
SmoI CTYRAG 3 cut(s) 89, 755, 1475
SpeI ACTAGT 1 cut(s) 1276
SphI GCATGC 1 cut(s) 1661
Sse9I AATT 7 cut(s) 346, 897, 924, 1331, 1344, 1416, 1539
SseBI AGGCCT 1 cut(s) 1685
SsiI CCGC 8 cut(s) 51, 85, 128, 320, 356, 458, 501, 600
SspDI GGCGCC 1 cut(s) 497
SspMI CTAG 8 cut(s) 117, 182, 206, 243, 281, 1023, 1277, 1316
SstI GAGCTC 1 cut(s) 234
StuI AGGCCT 1 cut(s) 1685
StyD4I CCNGG 6 cut(s) 302, 552, 1177, 1217, 1652, 1752
StyI CCWWGG 3 cut(s) 270, 1464, 1686
TaaI ACNGT 9 cut(s) 68, 443, 617, 793, 799, 1148, 1371, 1498, 1853
TaiI ACGT 3 cut(s) 62, 534, 684
TaqI TCGA 6 cut(s) 198, 228, 237, 326, 476, 1930
TasI AATT 7 cut(s) 346, 897, 924, 1331, 1344, 1416, 1539
TauI GCSGC 2 cut(s) 87, 503
TfiI GAWTC 3 cut(s) 408, 865, 1460
Tru1I TTAA 5 cut(s) 1158, 1199, 1269, 1508, 1668
Tru9I TTAA 5 cut(s) 1158, 1199, 1269, 1508, 1668
TscAI CASTG 3 cut(s) 407, 1100, 1793
TseFI GTSAC 6 cut(s) 527, 793, 853, 942, 1233, 1318
TseI GCWGC 6 cut(s) 246, 391, 1288, 1391, 1489, 1868
Tsp45I GTSAC 6 cut(s) 527, 793, 853, 942, 1233, 1318
TspDTI ATGAA 5 cut(s) 142, 1181, 1808, 1824, 1869
TspGWI ACGGA 1 cut(s) 1315
TspRI CASTG 3 cut(s) 407, 1100, 1793
Tth111I GACNNNGTC 2 cut(s) 554, 940
Van91I CCANNNNNTGG 1 cut(s) 1433
VpaK11BI GGWCC 2 cut(s) 262, 384
VspI ATTAAT 1 cut(s) 1269
XagI CCTNNNNNAGG 2 cut(s) 135, 269
XapI RAATTY 1 cut(s) 924
XceI RCATGY 4 cut(s) 1035, 1661, 1725, 1733
XmiI GTMKAC 2 cut(s) 237, 1297
XmnI GAANNNNTTC 1 cut(s) 1815
XspI CTAG 8 cut(s) 117, 182, 206, 243, 281, 1023, 1277, 1316
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.