UPF0503 protein At3g09070, chloroplastic-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G46990 AT5G58930 |
| fragaria_vesca | FvH4_3g38100 |
| malus_domestica | MD03G1077100.v1.1 MD11G1081400.v1.1 |
| prunus_persica | Prupe.6G061700_v2.0.a1 |
| pyrus_communis | pycom03g06090 pycom05g14380 pycom15g27530 |
| rosa_chinensis | RchiOBHm_Chr5g0068451 |
| rosa_laevigata | RLG00000035976 |
| rosa_multiflora | Rmu_sc0005087.1_g000009 |
| rosa_roxburghii | Rroxscaffold_1G00012330 Rroxscaffold_1G00012340 Rroxscaffold_1G00013070 |
| rosa_rugosa | Rorug05G0390100 |
| rosa_samantha | Rh5AG448700 Rh5BG466800 Rh5CG488400 Rh5DG480200 |
| rosa_wichuraiana | Rw5G041880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1319 |
| AccB1I | GGYRCC | 1 cut(s) | 917 |
| AccBSI | CCGCTC | 1 cut(s) | 128 |
| AclWI | GGATC | 2 cut(s) | 644, 657 |
| AcoI | YGGCCR | 3 cut(s) | 99, 196, 219 |
| AcyI | GRCGYC | 4 cut(s) | 503, 737, 918, 1421 |
| AfaI | GTAC | 1 cut(s) | 620 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 65, 161, 162, 174, 607, 659, 1224 |
| AgsI | TTSAA | 8 cut(s) | 292, 409, 472, 865, 970, 980, 1037, 1345 |
| AjnI | CCWGG | 2 cut(s) | 96, 778 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 143, 175, 389, 421 |
| Alw21I | GWGCWC | 3 cut(s) | 174, 288, 1372 |
| Alw26I | GTCTC | 4 cut(s) | 44, 196, 366, 1491 |
| AlwI | GGATC | 2 cut(s) | 644, 657 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1243, 1489 |
| Ama87I | CYCGRG | 3 cut(s) | 434, 684, 727 |
| AoxI | GGCC | 6 cut(s) | 99, 103, 196, 219, 313, 1463 |
| ApeKI | GCWGC | 5 cut(s) | 122, 180, 817, 1055, 1470 |
| AspLEI | GCGC | 4 cut(s) | 77, 180, 246, 920 |
| AspS9I | GGNCC | 2 cut(s) | 165, 710 |
| AsuC2I | CCSGG | 4 cut(s) | 148, 163, 241, 660 |
| AsuHPI | GGTGA | 4 cut(s) | 14, 55, 122, 535 |
| AsuII | TTCGAA | 1 cut(s) | 962 |
| AvaI | CYCGRG | 3 cut(s) | 434, 684, 727 |
| AvaII | GGWCC | 2 cut(s) | 165, 710 |
| BamHI | GGATCC | 1 cut(s) | 649 |
| BanI | GGYRCC | 1 cut(s) | 917 |
| BanII | GRGCYC | 5 cut(s) | 174, 268, 288, 721, 779 |
| BauI | CACGAG | 1 cut(s) | 1276 |
| BbsI | GAAGAC | 4 cut(s) | 204, 554, 1173, 1352 |
| Bbv12I | GWGCWC | 3 cut(s) | 174, 288, 1372 |
| BbvCI | CCTCAGC | 1 cut(s) | 1193 |
| BbvI | GCAGC | 5 cut(s) | 109, 192, 829, 1042, 1482 |
| BccI | CCATC | 3 cut(s) | 68, 736, 943 |
| BceAI | ACGGC | 1 cut(s) | 516 |
| BciT130I | CCWGG | 2 cut(s) | 98, 780 |
| BclI | TGATCA | 2 cut(s) | 1081, 1393 |
| BcnI | CCSGG | 4 cut(s) | 148, 163, 241, 660 |
| BcoDI | GTCTC | 4 cut(s) | 44, 196, 366, 1491 |
| BfaI | CTAG | 1 cut(s) | 381 |
| BfmI | CTRYAG | 4 cut(s) | 900, 1267, 1352, 1435 |
| BfoI | RGCGCY | 1 cut(s) | 921 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 102, 1099 |
| BglII | AGATCT | 1 cut(s) | 430 |
| Bme1390I | CCNGG | 6 cut(s) | 98, 148, 163, 241, 660, 780 |
| Bme18I | GGWCC | 2 cut(s) | 165, 710 |
| BmeT110I | CYCGRG | 3 cut(s) | 434, 684, 727 |
| BmgT120I | GGNCC | 2 cut(s) | 165, 710 |
| BmiI | GGNNCC | 7 cut(s) | 152, 166, 651, 657, 711, 776, 919 |
| BmrFI | CCNGG | 6 cut(s) | 98, 148, 163, 241, 660, 780 |
| BmrI | ACTGGG | 1 cut(s) | 595 |
| BmsI | GCATC | 2 cut(s) | 388, 1122 |
| BmuI | ACTGGG | 1 cut(s) | 595 |
| BoxI | GACNNNNGTC | 1 cut(s) | 208 |
| BpiI | GAAGAC | 4 cut(s) | 204, 554, 1173, 1352 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1193 |
| Bpu14I | TTCGAA | 1 cut(s) | 962 |
| BpuMI | CCSGG | 4 cut(s) | 148, 163, 241, 660 |
| Bsa29I | ATCGAT | 1 cut(s) | 838 |
| BsaBI | GATNNNNATC | 1 cut(s) | 648 |
| BsaHI | GRCGYC | 4 cut(s) | 503, 737, 918, 1421 |
| BsaI | GGTCTC | 1 cut(s) | 196 |
| BsaJI | CCNNGG | 3 cut(s) | 683, 728, 778 |
| BsaWI | WCCGGW | 1 cut(s) | 652 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 766, 796 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 65, 161, 162, 174, 607, 659, 1224 |
| Bse118I | RCCGGY | 2 cut(s) | 65, 101 |
| Bse1I | ACTGG | 1 cut(s) | 601 |
| Bse3DI | GCAATG | 3 cut(s) | 536, 1309, 1342 |
| Bse8I | GATNNNNATC | 1 cut(s) | 648 |
| BseBI | CCWGG | 2 cut(s) | 98, 780 |
| BseCI | ATCGAT | 1 cut(s) | 838 |
| BseDI | CCNNGG | 3 cut(s) | 683, 728, 778 |
| BseGI | GGATG | 2 cut(s) | 403, 1168 |
| BseJI | GATNNNNATC | 1 cut(s) | 648 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 65, 161, 162, 174, 607, 659, 1224 |
| BseMI | GCAATG | 3 cut(s) | 536, 1309, 1342 |
| BseMII | CTCAG | 4 cut(s) | 100, 198, 332, 1184 |
| BseNI | ACTGG | 1 cut(s) | 601 |
| BseXI | GCAGC | 5 cut(s) | 109, 192, 829, 1042, 1482 |
| Bsh1285I | CGRYCG | 3 cut(s) | 307, 838, 842 |
| BshFI | GGCC | 6 cut(s) | 101, 105, 198, 221, 315, 1465 |
| BshNI | GGYRCC | 1 cut(s) | 917 |
| BshVI | ATCGAT | 1 cut(s) | 838 |
| BsiEI | CGRYCG | 3 cut(s) | 307, 838, 842 |
| BsiHKAI | GWGCWC | 3 cut(s) | 174, 288, 1372 |
| BsiHKCI | CYCGRG | 3 cut(s) | 434, 684, 727 |
| BsiSI | CCGG | 9 cut(s) | 66, 102, 148, 162, 175, 195, 241, 653, 659 |
| BslFI | GGGAC | 3 cut(s) | 499, 710, 874 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 65, 161, 162, 174, 607, 659, 1224 |
| BsmAI | GTCTC | 4 cut(s) | 44, 196, 366, 1491 |
| BsmBI | CGTCTC | 1 cut(s) | 366 |
| BsmFI | GGGAC | 3 cut(s) | 499, 710, 874 |
| BsnI | GGCC | 6 cut(s) | 101, 105, 198, 221, 315, 1465 |
| Bso31I | GGTCTC | 1 cut(s) | 196 |
| BsoBI | CYCGRG | 3 cut(s) | 434, 684, 727 |
| Bsp119I | TTCGAA | 1 cut(s) | 962 |
| Bsp1286I | GDGCHC | 6 cut(s) | 174, 268, 288, 721, 779, 1372 |
| Bsp143I | GATC | 7 cut(s) | 430, 635, 649, 835, 839, 1081, 1393 |
| BspANI | GGCC | 6 cut(s) | 101, 105, 198, 221, 315, 1465 |
| BspCNI | CTCAG | 4 cut(s) | 99, 199, 333, 1185 |
| BspDI | ATCGAT | 1 cut(s) | 838 |
| BspLI | GGNNCC | 7 cut(s) | 152, 166, 651, 657, 711, 776, 919 |
| BspMAI | CTGCAG | 1 cut(s) | 1356 |
| BspPI | GGATC | 2 cut(s) | 644, 657 |
| BspQI | GCTCTTC | 1 cut(s) | 293 |
| BspT104I | TTCGAA | 1 cut(s) | 962 |
| BspT107I | GGYRCC | 1 cut(s) | 917 |
| BspTNI | GGTCTC | 1 cut(s) | 196 |
| BsrBI | CCGCTC | 1 cut(s) | 128 |
| BsrDI | GCAATG | 3 cut(s) | 536, 1309, 1342 |
| BsrFI | RCCGGY | 2 cut(s) | 65, 101 |
| BsrI | ACTGG | 1 cut(s) | 601 |
| BssAI | RCCGGY | 2 cut(s) | 65, 101 |
| BssECI | CCNNGG | 3 cut(s) | 683, 728, 778 |
| BssMI | GATC | 7 cut(s) | 430, 635, 649, 835, 839, 1081, 1393 |
| BssNI | GRCGYC | 4 cut(s) | 503, 737, 918, 1421 |
| BssSI | CACGAG | 1 cut(s) | 1276 |
| Bst2BI | CACGAG | 1 cut(s) | 1276 |
| Bst2UI | CCWGG | 2 cut(s) | 98, 780 |
| Bst4CI | ACNGT | 3 cut(s) | 812, 1223, 1485 |
| Bst6I | CTCTTC | 4 cut(s) | 293, 345, 753, 1436 |
| BstACI | GRCGYC | 4 cut(s) | 503, 737, 918, 1421 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 189, 252 |
| BstBI | TTCGAA | 1 cut(s) | 962 |
| BstC8I | GCNNGC | 2 cut(s) | 103, 317 |
| BstDEI | CTNAG | 4 cut(s) | 86, 207, 341, 1193 |
| BstF5I | GGATG | 2 cut(s) | 403, 1168 |
| BstH2I | RGCGCY | 1 cut(s) | 921 |
| BstHHI | GCGC | 4 cut(s) | 77, 180, 246, 920 |
| BstKTI | GATC | 7 cut(s) | 433, 638, 652, 838, 842, 1084, 1396 |
| BstMAI | GTCTC | 4 cut(s) | 44, 196, 366, 1491 |
| BstMBI | GATC | 7 cut(s) | 430, 635, 649, 835, 839, 1081, 1393 |
| BstMCI | CGRYCG | 3 cut(s) | 307, 838, 842 |
| BstNI | CCWGG | 2 cut(s) | 98, 780 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 208 |
| BstSCI | CCNGG | 6 cut(s) | 96, 146, 161, 239, 658, 778 |
| BstSFI | CTRYAG | 4 cut(s) | 900, 1267, 1352, 1435 |
| BstV1I | GCAGC | 5 cut(s) | 109, 192, 829, 1042, 1482 |
| BstV2I | GAAGAC | 4 cut(s) | 204, 554, 1173, 1352 |
| BstX2I | RGATCY | 2 cut(s) | 430, 649 |
| BstYI | RGATCY | 2 cut(s) | 430, 649 |
| Bsu15I | ATCGAT | 1 cut(s) | 838 |
| BsuRI | GGCC | 6 cut(s) | 101, 105, 198, 221, 315, 1465 |
| BsuTUI | ATCGAT | 1 cut(s) | 838 |
| BtsCI | GGATG | 2 cut(s) | 403, 1168 |
| BtsIMutI | CAGTG | 2 cut(s) | 94, 1228 |
| Cac8I | GCNNGC | 2 cut(s) | 103, 317 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1243, 1489 |
| CfoI | GCGC | 4 cut(s) | 77, 180, 246, 920 |
| Cfr10I | RCCGGY | 2 cut(s) | 65, 101 |
| Cfr13I | GGNCC | 2 cut(s) | 165, 710 |
| ClaI | ATCGAT | 1 cut(s) | 838 |
| CseI | GACGC | 3 cut(s) | 492, 745, 1429 |
| Csp6I | GTAC | 1 cut(s) | 619 |
| CviAII | CATG | 2 cut(s) | 189, 1397 |
| CviQI | GTAC | 1 cut(s) | 619 |
| DdeI | CTNAG | 4 cut(s) | 86, 207, 341, 1193 |
| DinI | GGCGCC | 1 cut(s) | 919 |
| DpnI | GATC | 7 cut(s) | 432, 637, 651, 837, 841, 1083, 1395 |
| DpnII | GATC | 7 cut(s) | 430, 635, 649, 835, 839, 1081, 1393 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1319 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1319 |
| EaeI | YGGCCR | 3 cut(s) | 99, 196, 219 |
| Eam1104I | CTCTTC | 4 cut(s) | 293, 345, 753, 1436 |
| EarI | CTCTTC | 4 cut(s) | 293, 345, 753, 1436 |
| EciI | GGCGGA | 6 cut(s) | 32, 103, 553, 575, 841, 863 |
| Ecl136II | GAGCTC | 2 cut(s) | 172, 286 |
| Eco147I | AGGCCT | 1 cut(s) | 315 |
| Eco24I | GRGCYC | 5 cut(s) | 174, 268, 288, 721, 779 |
| Eco31I | GGTCTC | 1 cut(s) | 196 |
| Eco47I | GGWCC | 2 cut(s) | 165, 710 |
| Eco53kI | GAGCTC | 2 cut(s) | 172, 286 |
| Eco88I | CYCGRG | 3 cut(s) | 434, 684, 727 |
| EcoICRI | GAGCTC | 2 cut(s) | 172, 286 |
| EcoRII | CCWGG | 2 cut(s) | 96, 778 |
| EcoT38I | GRGCYC | 5 cut(s) | 174, 268, 288, 721, 779 |
| EgeI | GGCGCC | 1 cut(s) | 919 |
| EheI | GGCGCC | 1 cut(s) | 919 |
| Esp3I | CGTCTC | 1 cut(s) | 366 |
| FaeI | CATG | 2 cut(s) | 192, 1400 |
| FaiI | YATR | 4 cut(s) | 10, 190, 915, 1398 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 1487 |
| FaqI | GGGAC | 3 cut(s) | 499, 710, 874 |
| FatI | CATG | 2 cut(s) | 188, 1396 |
| FauI | CCCGC | 1 cut(s) | 451 |
| FbaI | TGATCA | 2 cut(s) | 1081, 1393 |
| FokI | GGATG | 2 cut(s) | 410, 1175 |
| FriOI | GRGCYC | 5 cut(s) | 174, 268, 288, 721, 779 |
| FseI | GGCCGGCC | 1 cut(s) | 105 |
| FspBI | CTAG | 1 cut(s) | 381 |
| GlaI | GCGC | 4 cut(s) | 76, 179, 245, 919 |
| HaeII | RGCGCY | 1 cut(s) | 921 |
| HaeIII | GGCC | 6 cut(s) | 101, 105, 198, 221, 315, 1465 |
| HapII | CCGG | 9 cut(s) | 66, 102, 148, 162, 175, 195, 241, 653, 659 |
| HgaI | GACGC | 3 cut(s) | 492, 745, 1429 |
| HhaI | GCGC | 4 cut(s) | 77, 180, 246, 920 |
| Hin1I | GRCGYC | 4 cut(s) | 503, 737, 918, 1421 |
| Hin1II | CATG | 2 cut(s) | 192, 1400 |
| Hin6I | GCGC | 4 cut(s) | 75, 178, 244, 918 |
| HinP1I | GCGC | 4 cut(s) | 75, 178, 244, 918 |
| HinfI | GANTC | 8 cut(s) | 110, 209, 392, 1064, 1178, 1246, 1348, 1448 |
| HpaII | CCGG | 9 cut(s) | 66, 102, 148, 162, 175, 195, 241, 653, 659 |
| HphI | GGTGA | 4 cut(s) | 14, 55, 122, 535 |
| Hpy166II | GTNNAC | 2 cut(s) | 33, 92 |
| Hpy188I | TCNGA | 6 cut(s) | 169, 270, 283, 397, 607, 1251 |
| Hpy188III | TCNNGA | 6 cut(s) | 409, 434, 464, 1324, 1391, 1452 |
| Hpy8I | GTNNAC | 2 cut(s) | 33, 92 |
| Hpy99I | CGWCG | 4 cut(s) | 260, 302, 305, 508 |
| HpyAV | CCTTC | 6 cut(s) | 412, 445, 466, 514, 550, 934 |
| HpyCH4III | ACNGT | 3 cut(s) | 812, 1223, 1485 |
| HpyCH4IV | ACGT | 2 cut(s) | 258, 1314 |
| HpyCH4V | TGCA | 3 cut(s) | 1135, 1281, 1354 |
| HpyF3I | CTNAG | 4 cut(s) | 86, 207, 341, 1193 |
| HpySE526I | ACGT | 2 cut(s) | 258, 1314 |
| Hsp92I | GRCGYC | 4 cut(s) | 503, 737, 918, 1421 |
| Hsp92II | CATG | 2 cut(s) | 192, 1400 |
| HspAI | GCGC | 4 cut(s) | 75, 178, 244, 918 |
| KasI | GGCGCC | 1 cut(s) | 917 |
| KroI | GCCGGC | 1 cut(s) | 101 |
| KroNI | GCCGGC | 1 cut(s) | 103 |
| Ksp22I | TGATCA | 2 cut(s) | 1081, 1393 |
| Kzo9I | GATC | 7 cut(s) | 430, 635, 649, 835, 839, 1081, 1393 |
| LguI | GCTCTTC | 1 cut(s) | 293 |
| LmnI | GCTCC | 7 cut(s) | 177, 197, 283, 421, 774, 828, 1431 |
| Lsp1109I | GCAGC | 5 cut(s) | 109, 192, 829, 1042, 1482 |
| LweI | GCATC | 2 cut(s) | 388, 1122 |
| MaeI | CTAG | 1 cut(s) | 381 |
| MaeII | ACGT | 2 cut(s) | 258, 1314 |
| MaeIII | GTNAC | 2 cut(s) | 871, 1253 |
| MalI | GATC | 7 cut(s) | 432, 637, 651, 837, 841, 1083, 1395 |
| MbiI | CCGCTC | 1 cut(s) | 128 |
| MboI | GATC | 7 cut(s) | 430, 635, 649, 835, 839, 1081, 1393 |
| MflI | RGATCY | 2 cut(s) | 430, 649 |
| MhlI | GDGCHC | 6 cut(s) | 174, 268, 288, 721, 779, 1372 |
| MluCI | AATT | 1 cut(s) | 930 |
| Mly113I | GGCGCC | 1 cut(s) | 918 |
| MlyI | GAGTC | 4 cut(s) | 104, 218, 1342, 1457 |
| MmeI | TCCRAC | 3 cut(s) | 261, 585, 592 |
| MroNI | GCCGGC | 1 cut(s) | 101 |
| MspA1I | CMGCKG | 2 cut(s) | 122, 820 |
| MspI | CCGG | 9 cut(s) | 66, 102, 148, 162, 175, 195, 241, 653, 659 |
| MspR9I | CCNGG | 6 cut(s) | 98, 148, 163, 241, 660, 780 |
| MvaI | CCWGG | 2 cut(s) | 98, 780 |
| NaeI | GCCGGC | 1 cut(s) | 103 |
| NarI | GGCGCC | 1 cut(s) | 918 |
| NciI | CCSGG | 4 cut(s) | 148, 163, 241, 660 |
| NdeII | GATC | 7 cut(s) | 430, 635, 649, 835, 839, 1081, 1393 |
| NgoMIV | GCCGGC | 1 cut(s) | 101 |
| NlaIII | CATG | 2 cut(s) | 192, 1400 |
| NlaIV | GGNNCC | 7 cut(s) | 152, 166, 651, 657, 711, 776, 919 |
| NspV | TTCGAA | 1 cut(s) | 962 |
| PaeR7I | CTCGAG | 1 cut(s) | 434 |
| PceI | AGGCCT | 1 cut(s) | 315 |
| PciSI | GCTCTTC | 1 cut(s) | 293 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 573, 1320 |
| PdiI | GCCGGC | 1 cut(s) | 103 |
| PfeI | GAWTC | 4 cut(s) | 392, 1064, 1178, 1246 |
| Ple19I | CGATCG | 2 cut(s) | 838, 842 |
| PleI | GAGTC | 4 cut(s) | 104, 217, 1342, 1456 |
| PluTI | GGCGCC | 1 cut(s) | 921 |
| PpsI | GAGTC | 4 cut(s) | 104, 217, 1342, 1456 |
| PshAI | GACNNNNGTC | 1 cut(s) | 208 |
| Psp124BI | GAGCTC | 2 cut(s) | 174, 288 |
| Psp6I | CCWGG | 2 cut(s) | 96, 778 |
| PspGI | CCWGG | 2 cut(s) | 96, 778 |
| PspN4I | GGNNCC | 7 cut(s) | 152, 166, 651, 657, 711, 776, 919 |
| PspPI | GGNCC | 2 cut(s) | 165, 710 |
| PstI | CTGCAG | 1 cut(s) | 1356 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1243, 1489 |
| PsuI | RGATCY | 2 cut(s) | 430, 649 |
| PvuI | CGATCG | 2 cut(s) | 838, 842 |
| RigI | GGCCGGCC | 1 cut(s) | 105 |
| RsaI | GTAC | 1 cut(s) | 620 |
| RsaNI | GTAC | 1 cut(s) | 619 |
| SacI | GAGCTC | 2 cut(s) | 174, 288 |
| SapI | GCTCTTC | 1 cut(s) | 293 |
| Sau3AI | GATC | 7 cut(s) | 430, 635, 649, 835, 839, 1081, 1393 |
| Sau96I | GGNCC | 2 cut(s) | 165, 710 |
| SchI | GAGTC | 4 cut(s) | 104, 218, 1342, 1457 |
| ScrFI | CCNGG | 6 cut(s) | 98, 148, 163, 241, 660, 780 |
| SduI | GDGCHC | 6 cut(s) | 174, 268, 288, 721, 779, 1372 |
| SfaNI | GCATC | 2 cut(s) | 388, 1122 |
| SfcI | CTRYAG | 4 cut(s) | 900, 1267, 1352, 1435 |
| SfoI | GGCGCC | 1 cut(s) | 919 |
| Sfr274I | CTCGAG | 1 cut(s) | 434 |
| SfuI | TTCGAA | 1 cut(s) | 962 |
| SinI | GGWCC | 2 cut(s) | 165, 710 |
| SlaI | CTCGAG | 1 cut(s) | 434 |
| SmlI | CTYRAG | 1 cut(s) | 434 |
| SmoI | CTYRAG | 1 cut(s) | 434 |
| Sse9I | AATT | 1 cut(s) | 930 |
| SseBI | AGGCCT | 1 cut(s) | 315 |
| SspDI | GGCGCC | 1 cut(s) | 917 |
| SspMI | CTAG | 1 cut(s) | 381 |
| SstI | GAGCTC | 2 cut(s) | 174, 288 |
| StuI | AGGCCT | 1 cut(s) | 315 |
| StyD4I | CCNGG | 6 cut(s) | 96, 146, 161, 239, 658, 778 |
| TaaI | ACNGT | 3 cut(s) | 812, 1223, 1485 |
| TaiI | ACGT | 2 cut(s) | 261, 1317 |
| TaqI | TCGA | 9 cut(s) | 108, 297, 336, 435, 664, 834, 838, 962, 1323 |
| TasI | AATT | 1 cut(s) | 930 |
| TauI | GCSGC | 8 cut(s) | 119, 122, 128, 538, 823, 826, 848, 1105 |
| TfiI | GAWTC | 4 cut(s) | 392, 1064, 1178, 1246 |
| TscAI | CASTG | 2 cut(s) | 94, 1228 |
| TseI | GCWGC | 5 cut(s) | 122, 180, 817, 1055, 1470 |
| TspDTI | ATGAA | 3 cut(s) | 204, 431, 1179 |
| TspGWI | ACGGA | 1 cut(s) | 662 |
| TspRI | CASTG | 2 cut(s) | 94, 1228 |
| VpaK11BI | GGWCC | 2 cut(s) | 165, 710 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 608 |
| XhoI | CTCGAG | 1 cut(s) | 434 |
| XspI | CTAG | 1 cut(s) | 381 |