Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0010196

Physical Location & Seq

Genomic Coordinates Forward (+)

77031904 .. 77038734

Gene Structure 6831 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG448700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGACCCAACACCGCCAAGCCCAAGCCCAGGCCCAACCCCACCGCCGCTCCACCTGTCACCGTCACCCCACCACACCCATCACCGGATTCTGCGCCCCTTGCCTCAGCGAACGCCTCGCCGGCCTCGACTCCTCCTCCCCTTCCGCCGCCGTTGCTCTCCAGAACGCGCATTCCGGGTCTTCGGAGCTCCGGCGCAGCAAATCGTGCTGCGGGACCCGACCCGAGTCGTCGGCCTACCCGCCGGAGCCTCCTCGGCGCAAGTCGTGCGACGTCAGGAACCGGAACACTCTCTCGGAGCTCTTCAACATCGACGACCACCGCAAGGGCCTGCCCAGAAGGTTCGAGATCGATTCCAGCGGCCAAGGCTTCGAATTGAAAGAAGAGCCGGAGGAGGAGCACAATGGGGATGAAACTAGGGCTTCGGACGCGGAGTTCAAGACGATGAAGGAGCTGATAGATCTCGAGTTGCAGAGGAAGAAGGGCAACGGTCGAGATTTGAGAGAAATCGCAGGGACATTTTGGGAAACTGCCTCGAACAAAGTGAGGCAATGGCGCCGGAAGCAGAAGCCCAAGAAGCTCGAAAGCGAGGGTTTGGGGGCGGAGAAGCGAAGCGCGAGGCGTGGGTTGAGGGAGACCCAATCGGAGGTGGGGGAGTACGCATTGGGCCGGAGATCGTGCGATACGGATCTGGATCCGGGTCGGATGTCGTTGGATGAGCCTCGGGCTTCGTGGGACGGGTACATGAGCTCGAGAGCGTACCCGAGGATGACTCCGATGGTTTCGGTGGTGGAGGATGTGAAAATGAGTGAGGAGGAGGGCTTGGAGAACTTGGAGAGGAGTCCCGGGGGGTCGGCTCAGACTAAAGACTACTACTTTTCGCAGACGAGGCGGCGGCGGAGCTTTGAGAGGTCGGGTGCTTGTGCTCATAGTAGCAAAGGGGTAATGCCGGCGGAGGTGGATGAGTTGAAGCTGGTGTCGAATGGCGCTACGGAGTTGTTCTATGGGGCGAAGCTGCTGATTACGGAGAAGGAATTGATGGAGTCGAGTTCTTCGAATTCAAAGTCTGTGGAAGAGGATGGTGTGGTGGGGGGTGCTGGTGTTGGCAGCATTGAAGGTGTTTGTGGAAATGTAGCTGCTGTTTCGTCGAATGATCAGAAGCCACAGAAATGGCACAAGAGGTGGAAGTTCTGGGGCTTGATGCAGGGGAAAAGCCAGGCGAAACATGGTGGTGGTGCTCAAGAAGAGTCCTGGAAAAAGCTGAGGAGGGTTGCTAATGGAGAAGCCAATAATGCCTCTGTGAGCCAGAAGCTGATTCGAAGCTACAGTGTCAGCTGCAGAAACTCCTGCAAAATGGTGGGTTTGTTTAGTAATGTGAGCACTGTAGAGAGCAAAGGCAATGGCTTGAAGACGTTGCATAGGAACCGGAGCGCACGTTACTCACCGAGTAATCTTGATCACGGCCTCTTAAGGTTTTACTTGACACCATTGAGGAGTTATAGGAGGAGTGAATCGTGGAAGAGTAGGCTGCCAAACAACAACTCCCCGCAGACTTTGGCCAAGAATGTGTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF740

Protein Analysis

523

Amino Acids

58.41

Weight (kDa)

9.48

Isoelectric Point (pI)

76.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF740	PF05340	10 - 53	7.4e-10	Protein of unknown function (DUF740)
DUF740	PF05340	58 - 116	9.1e-11	Protein of unknown function (DUF740)
DUF740	PF05340	124 - 501	1.2e-82	Protein of unknown function (DUF740)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010196)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46990 AT5G58930
fragaria_vesca	FvH4_3g38100
malus_domestica	MD03G1077100.v1.1 MD11G1081400.v1.1
prunus_persica	Prupe.6G061700_v2.0.a1
pyrus_communis	pycom03g06090 pycom05g14380 pycom15g27530
rosa_chinensis	RchiOBHm_Chr5g0068451
rosa_laevigata	RLG00000035976
rosa_multiflora	Rmu_sc0005087.1_g000009
rosa_roxburghii	Rroxscaffold_1G00012330 Rroxscaffold_1G00012340 Rroxscaffold_1G00013070
rosa_rugosa	Rorug05G0390100
rosa_samantha	Rh5AG448700 Rh5BG466800 Rh5CG488400 Rh5DG480200
rosa_wichuraiana	Rw5G041880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	273
AccB1I	GGYRCC	1 cut(s)	552
AccBSI	CCGCTC	1 cut(s)	48
AccII	CGCG	3 cut(s)	167, 428, 614
AclWI	GGATC	3 cut(s)	686, 693, 699
AcoI	YGGCCR	2 cut(s)	358, 1554
AcsI	RAATTY	1 cut(s)	1054
AcyI	GRCGYC	2 cut(s)	270, 553
AfaI	GTAC	3 cut(s)	656, 740, 758
AfiI	CCNNNNNNNGG	4 cut(s)	28, 83, 322, 643
AflII	CTTAAG	1 cut(s)	1465
AgsI	TTSAA	7 cut(s)	304, 376, 436, 967, 1059, 1112, 1405
AjnI	CCWGG	3 cut(s)	27, 1212, 1247
AloI	GAACNNNNNNTCC	4 cut(s)	155, 187, 416, 448
Alw21I	GWGCWC	7 cut(s)	189, 300, 399, 749, 925, 1237, 1379
Alw26I	GTCTC	1 cut(s)	626
AlwI	GGATC	3 cut(s)	686, 693, 699
AlwNI	CAGNNNCTG	1 cut(s)	1309
Ama87I	CYCGRG	6 cut(s)	221, 461, 720, 748, 760, 842
AoxI	GGCC	8 cut(s)	30, 121, 231, 325, 358, 664, 1459, 1554
ApeKI	GCWGC	7 cut(s)	195, 207, 1012, 1104, 1133, 1332, 1525
ApoI	RAATTY	1 cut(s)	1054
ArsI	GACNNNNNNTTYG	2 cut(s)	1046, 1078
AspLEI	GCGC	8 cut(s)	95, 169, 195, 258, 555, 614, 986, 1430
AspS9I	GGNCC	4 cut(s)	31, 213, 325, 664
AsuC2I	CCSGG	4 cut(s)	175, 696, 843, 844
AsuHPI	GGTGA	4 cut(s)	50, 56, 73, 1431
AsuII	TTCGAA	3 cut(s)	369, 1052, 1315
AvaI	CYCGRG	6 cut(s)	221, 461, 720, 748, 760, 842
AvaII	GGWCC	1 cut(s)	213
BalI	TGGCCA	1 cut(s)	1556
BamHI	GGATCC	1 cut(s)	691
BanI	GGYRCC	1 cut(s)	552
BanII	GRGCYC	3 cut(s)	189, 300, 749
BbsI	GAAGAC	2 cut(s)	171, 1412
Bbv12I	GWGCWC	7 cut(s)	189, 300, 399, 749, 925, 1237, 1379
BbvCI	CCTCAGC	2 cut(s)	104, 1259
BbvI	GCAGC	7 cut(s)	194, 207, 999, 1116, 1120, 1319, 1512
BccI	CCATC	4 cut(s)	86, 769, 1030, 1070
BceAI	ACGGC	2 cut(s)	134, 1474
BciT130I	CCWGG	3 cut(s)	29, 1214, 1249
BclI	TGATCA	2 cut(s)	1150, 1453
BcnI	CCSGG	4 cut(s)	175, 696, 843, 844
BcoDI	GTCTC	1 cut(s)	626
BfaI	CTAG	1 cut(s)	414
BfmI	CTRYAG	3 cut(s)	1321, 1333, 1380
BfoI	RGCGCY	2 cut(s)	556, 987
BfrI	CTTAAG	1 cut(s)	1465
BglI	GCCNNNNNGGC	2 cut(s)	120, 253
BglII	AGATCT	1 cut(s)	457
Bme1390I	CCNGG	7 cut(s)	29, 175, 696, 843, 844, 1214, 1249
Bme18I	GGWCC	1 cut(s)	213
BmeT110I	CYCGRG	6 cut(s)	221, 461, 720, 748, 760, 842
BmgT120I	GGNCC	4 cut(s)	31, 213, 325, 664
BmiI	GGNNCC	7 cut(s)	214, 215, 246, 278, 554, 693, 1421
BmrFI	CCNGG	7 cut(s)	29, 175, 696, 843, 844, 1214, 1249
BmsI	GCATC	1 cut(s)	1188
BoxI	GACNNNNGTC	1 cut(s)	223
BpiI	GAAGAC	2 cut(s)	171, 1412
BplI	GAGNNNNNCTC	2 cut(s)	754, 786
BpmI	CTGGAG	1 cut(s)	143
Bpu10I	CCTNAGC	2 cut(s)	104, 1259
Bpu14I	TTCGAA	3 cut(s)	369, 1052, 1315
BpuEI	CTTGAG	1 cut(s)	1221
BpuMI	CCSGG	4 cut(s)	175, 696, 843, 844
Bsa29I	ATCGAT	1 cut(s)	348
BsaBI	GATNNNNATC	2 cut(s)	684, 690
BsaHI	GRCGYC	2 cut(s)	270, 553
BsaI	GGTCTC	1 cut(s)	626
BsaJI	CCNNGG	7 cut(s)	27, 251, 361, 719, 761, 842, 843
BsaWI	WCCGGW	3 cut(s)	83, 279, 1422
BsaXI	ACNNNNNCTCC	8 cut(s)	32, 62, 119, 149, 1417, 1447, 1523, 1553
Bsc4I	CCNNNNNNNGG	4 cut(s)	28, 83, 322, 643
Bse118I	RCCGGY	2 cut(s)	119, 946
Bse3DI	GCAATG	2 cut(s)	554, 1402
Bse8I	GATNNNNATC	2 cut(s)	684, 690
BseBI	CCWGG	3 cut(s)	29, 1214, 1249
BseCI	ATCGAT	1 cut(s)	348
BseDI	CCNNGG	7 cut(s)	27, 251, 361, 719, 761, 842, 843
BseGI	GGATG	7 cut(s)	412, 708, 718, 771, 799, 964, 1081
BseJI	GATNNNNATC	2 cut(s)	684, 690
BseLI	CCNNNNNNNGG	4 cut(s)	28, 83, 322, 643
BseMI	GCAATG	2 cut(s)	554, 1402
BseMII	CTCAG	3 cut(s)	118, 869, 1250
BseXI	GCAGC	7 cut(s)	194, 207, 999, 1116, 1120, 1319, 1512
Bsh1236I	CGCG	3 cut(s)	167, 428, 614
Bsh1285I	CGRYCG	1 cut(s)	490
BshFI	GGCC	8 cut(s)	32, 123, 233, 327, 360, 666, 1461, 1556
BshNI	GGYRCC	1 cut(s)	552
BshVI	ATCGAT	1 cut(s)	348
BsiEI	CGRYCG	1 cut(s)	490
BsiHKAI	GWGCWC	7 cut(s)	189, 300, 399, 749, 925, 1237, 1379
BsiHKCI	CYCGRG	6 cut(s)	221, 461, 720, 748, 760, 842
BslFI	GGGAC	4 cut(s)	226, 526, 746, 825
BslI	CCNNNNNNNGG	4 cut(s)	28, 83, 322, 643
BsmAI	GTCTC	1 cut(s)	626
BsmFI	GGGAC	4 cut(s)	226, 526, 746, 825
BsmI	GAATGC	1 cut(s)	169
BsnI	GGCC	8 cut(s)	32, 123, 233, 327, 360, 666, 1461, 1556
Bso31I	GGTCTC	1 cut(s)	626
BsoBI	CYCGRG	6 cut(s)	221, 461, 720, 748, 760, 842
Bsp119I	TTCGAA	3 cut(s)	369, 1052, 1315
Bsp1286I	GDGCHC	7 cut(s)	189, 300, 399, 749, 925, 1237, 1379
Bsp143I	GATC	7 cut(s)	345, 457, 671, 685, 691, 1150, 1453
BspANI	GGCC	8 cut(s)	32, 123, 233, 327, 360, 666, 1461, 1556
BspCNI	CTCAG	3 cut(s)	117, 868, 1251
BspDI	ATCGAT	1 cut(s)	348
BspFNI	CGCG	3 cut(s)	167, 428, 614
BspLI	GGNNCC	7 cut(s)	214, 215, 246, 278, 554, 693, 1421
BspMAI	CTGCAG	1 cut(s)	1337
BspPI	GGATC	3 cut(s)	686, 693, 699
BspQI	GCTCTTC	2 cut(s)	305, 375
BspT104I	TTCGAA	3 cut(s)	369, 1052, 1315
BspT107I	GGYRCC	1 cut(s)	552
BspTI	CTTAAG	1 cut(s)	1465
BspTNI	GGTCTC	1 cut(s)	626
BsrBI	CCGCTC	1 cut(s)	48
BsrDI	GCAATG	2 cut(s)	554, 1402
BsrFI	RCCGGY	2 cut(s)	119, 946
BssAI	RCCGGY	2 cut(s)	119, 946
BssECI	CCNNGG	7 cut(s)	27, 251, 361, 719, 761, 842, 843
BssMI	GATC	7 cut(s)	345, 457, 671, 685, 691, 1150, 1453
BssNI	GRCGYC	2 cut(s)	270, 553
BssT1I	CCWWGG	1 cut(s)	361
Bst2UI	CCWGG	3 cut(s)	29, 1214, 1249
Bst4CI	ACNGT	4 cut(s)	62, 488, 1325, 1381
Bst6I	CTCTTC	5 cut(s)	305, 375, 1065, 1236, 1511
BstACI	GRCGYC	2 cut(s)	270, 553
BstAFI	CTTAAG	1 cut(s)	1465
BstAPI	GCANNNNNTGC	2 cut(s)	204, 264
BstBI	TTCGAA	3 cut(s)	369, 1052, 1315
BstC8I	GCNNGC	3 cut(s)	121, 329, 948
BstDEI	CTNAG	3 cut(s)	104, 855, 1259
BstF5I	GGATG	7 cut(s)	412, 708, 718, 771, 799, 964, 1081
BstFNI	CGCG	3 cut(s)	167, 428, 614
BstH2I	RGCGCY	2 cut(s)	556, 987
BstHHI	GCGC	8 cut(s)	95, 169, 195, 258, 555, 614, 986, 1430
BstKTI	GATC	7 cut(s)	348, 460, 674, 688, 694, 1153, 1456
BstMAI	GTCTC	1 cut(s)	626
BstMBI	GATC	7 cut(s)	345, 457, 671, 685, 691, 1150, 1453
BstMCI	CGRYCG	1 cut(s)	490
BstNI	CCWGG	3 cut(s)	29, 1214, 1249
BstPAI	GACNNNNGTC	1 cut(s)	223
BstSCI	CCNGG	7 cut(s)	27, 173, 694, 841, 842, 1212, 1247
BstSFI	CTRYAG	3 cut(s)	1321, 1333, 1380
BstUI	CGCG	3 cut(s)	167, 428, 614
BstV1I	GCAGC	7 cut(s)	194, 207, 999, 1116, 1120, 1319, 1512
BstV2I	GAAGAC	2 cut(s)	171, 1412
BstX2I	RGATCY	3 cut(s)	457, 685, 691
BstXI	CCANNNNNNTGG	1 cut(s)	1167
BstYI	RGATCY	3 cut(s)	457, 685, 691
Bsu15I	ATCGAT	1 cut(s)	348
BsuRI	GGCC	8 cut(s)	32, 123, 233, 327, 360, 666, 1461, 1556
BsuTUI	ATCGAT	1 cut(s)	348
BtsCI	GGATG	7 cut(s)	412, 708, 718, 771, 799, 964, 1081
BtsIMutI	CAGTG	2 cut(s)	1330, 1377
Cac8I	GCNNGC	3 cut(s)	121, 329, 948
CaiI	CAGNNNCTG	1 cut(s)	1309
CfoI	GCGC	8 cut(s)	95, 169, 195, 258, 555, 614, 986, 1430
Cfr10I	RCCGGY	2 cut(s)	119, 946
Cfr13I	GGNCC	4 cut(s)	31, 213, 325, 664
Cfr9I	CCCGGG	1 cut(s)	842
ClaI	ATCGAT	1 cut(s)	348
CseI	GACGC	1 cut(s)	434
Csp6I	GTAC	3 cut(s)	655, 739, 757
CspCI	CAANNNNNGTGG	2 cut(s)	1047, 1082
CviAII	CATG	2 cut(s)	742, 1223
CviQI	GTAC	3 cut(s)	655, 739, 757
DdeI	CTNAG	3 cut(s)	104, 855, 1259
DinI	GGCGCC	1 cut(s)	554
DpnI	GATC	7 cut(s)	347, 459, 673, 687, 693, 1152, 1455
DpnII	GATC	7 cut(s)	345, 457, 671, 685, 691, 1150, 1453
EaeI	YGGCCR	2 cut(s)	358, 1554
Eam1104I	CTCTTC	5 cut(s)	305, 375, 1065, 1236, 1511
EarI	CTCTTC	5 cut(s)	305, 375, 1065, 1236, 1511
EciI	GGCGGA	4 cut(s)	133, 614, 910, 965
Ecl136II	GAGCTC	3 cut(s)	187, 298, 747
Eco130I	CCWWGG	1 cut(s)	361
Eco24I	GRGCYC	3 cut(s)	189, 300, 749
Eco31I	GGTCTC	1 cut(s)	626
Eco47I	GGWCC	1 cut(s)	213
Eco53kI	GAGCTC	3 cut(s)	187, 298, 747
Eco88I	CYCGRG	6 cut(s)	221, 461, 720, 748, 760, 842
EcoICRI	GAGCTC	3 cut(s)	187, 298, 747
EcoO109I	RGGNCCY	2 cut(s)	213, 325
EcoRI	GAATTC	1 cut(s)	1054
EcoRII	CCWGG	3 cut(s)	27, 1212, 1247
EcoT14I	CCWWGG	1 cut(s)	361
EcoT38I	GRGCYC	3 cut(s)	189, 300, 749
EgeI	GGCGCC	1 cut(s)	554
EheI	GGCGCC	1 cut(s)	554
ErhI	CCWWGG	1 cut(s)	361
FaeI	CATG	2 cut(s)	745, 1226
FaiI	YATR	6 cut(s)	743, 927, 1002, 1224, 1416, 1497
FaqI	GGGAC	4 cut(s)	226, 526, 746, 825
FatI	CATG	2 cut(s)	741, 1222
FauI	CCCGC	3 cut(s)	203, 246, 1551
FbaI	TGATCA	2 cut(s)	1150, 1453
FokI	GGATG	7 cut(s)	419, 715, 725, 778, 806, 971, 1088
FriOI	GRGCYC	3 cut(s)	189, 300, 749
FspBI	CTAG	1 cut(s)	414
GlaI	GCGC	8 cut(s)	94, 168, 194, 257, 554, 613, 985, 1429
GsuI	CTGGAG	1 cut(s)	143
HaeII	RGCGCY	2 cut(s)	556, 987
HaeIII	GGCC	8 cut(s)	32, 123, 233, 327, 360, 666, 1461, 1556
HgaI	GACGC	1 cut(s)	434
HhaI	GCGC	8 cut(s)	95, 169, 195, 258, 555, 614, 986, 1430
Hin1I	GRCGYC	2 cut(s)	270, 553
Hin1II	CATG	2 cut(s)	745, 1226
Hin6I	GCGC	8 cut(s)	93, 167, 193, 256, 553, 612, 984, 1428
HinP1I	GCGC	8 cut(s)	93, 167, 193, 256, 553, 612, 984, 1428
HphI	GGTGA	4 cut(s)	50, 56, 73, 1431
Hpy188I	TCNGA	8 cut(s)	184, 295, 424, 643, 702, 774, 858, 1155
Hpy99I	CGWCG	4 cut(s)	232, 272, 314, 1147
HpyAV	CCTTC	6 cut(s)	150, 330, 439, 472, 1021, 1106
HpyCH4III	ACNGT	4 cut(s)	62, 488, 1325, 1381
HpyCH4IV	ACGT	3 cut(s)	270, 1409, 1432
HpyCH4V	TGCA	5 cut(s)	469, 1201, 1335, 1347, 1414
HpyF3I	CTNAG	3 cut(s)	104, 855, 1259
HpySE526I	ACGT	3 cut(s)	270, 1409, 1432
Hsp92I	GRCGYC	2 cut(s)	270, 553
Hsp92II	CATG	2 cut(s)	745, 1226
HspAI	GCGC	8 cut(s)	93, 167, 193, 256, 553, 612, 984, 1428
KasI	GGCGCC	1 cut(s)	552
KflI	GGGWCCC	1 cut(s)	213
KroI	GCCGGC	2 cut(s)	119, 946
KroNI	GCCGGC	2 cut(s)	121, 948
Ksp22I	TGATCA	2 cut(s)	1150, 1453
Kzo9I	GATC	7 cut(s)	345, 457, 671, 685, 691, 1150, 1453
LguI	GCTCTTC	2 cut(s)	305, 375
LmnI	GCTCC	9 cut(s)	53, 184, 192, 244, 295, 394, 448, 897, 1425
Lsp1109I	GCAGC	7 cut(s)	194, 207, 999, 1116, 1120, 1319, 1512
LweI	GCATC	1 cut(s)	1188
MaeI	CTAG	1 cut(s)	414
MaeII	ACGT	3 cut(s)	270, 1409, 1432
MaeIII	GTNAC	3 cut(s)	56, 62, 1433
MalI	GATC	7 cut(s)	347, 459, 673, 687, 693, 1152, 1455
MbiI	CCGCTC	1 cut(s)	48
MboI	GATC	7 cut(s)	345, 457, 671, 685, 691, 1150, 1453
MboII	GAAGA	9 cut(s)	171, 292, 392, 487, 1041, 1082, 1253, 1417, 1528
MflI	RGATCY	3 cut(s)	457, 685, 691
MhlI	GDGCHC	7 cut(s)	189, 300, 399, 749, 925, 1237, 1379
MlsI	TGGCCA	1 cut(s)	1556
MluCI	AATT	3 cut(s)	371, 1031, 1054
MluNI	TGGCCA	1 cut(s)	1556
Mly113I	GGCGCC	1 cut(s)	553
MlyI	GAGTC	6 cut(s)	122, 233, 763, 847, 1049, 1253
MmeI	TCCRAC	2 cut(s)	680, 690
Mox20I	TGGCCA	1 cut(s)	1556
MroNI	GCCGGC	2 cut(s)	119, 946
MscI	TGGCCA	1 cut(s)	1556
MseI	TTAA	1 cut(s)	1466
MslI	CAYNNNNRTG	2 cut(s)	1165, 1227
Msp20I	TGGCCA	1 cut(s)	1556
MspA1I	CMGCKG	2 cut(s)	357, 1332
MspCI	CTTAAG	1 cut(s)	1465
MspR9I	CCNGG	7 cut(s)	29, 175, 696, 843, 844, 1214, 1249
Mva1269I	GAATGC	1 cut(s)	169
MvaI	CCWGG	3 cut(s)	29, 1214, 1249
MvnI	CGCG	3 cut(s)	167, 428, 614
NaeI	GCCGGC	2 cut(s)	121, 948
NarI	GGCGCC	1 cut(s)	553
NciI	CCSGG	4 cut(s)	175, 696, 843, 844
NdeII	GATC	7 cut(s)	345, 457, 671, 685, 691, 1150, 1453
NgoMIV	GCCGGC	2 cut(s)	119, 946
NlaIII	CATG	2 cut(s)	745, 1226
NlaIV	GGNNCC	7 cut(s)	214, 215, 246, 278, 554, 693, 1421
NmeAIII	GCCGAG	1 cut(s)	232
NmuCI	GTSAC	2 cut(s)	56, 62
NspV	TTCGAA	3 cut(s)	369, 1052, 1315
PaeR7I	CTCGAG	2 cut(s)	461, 748
PciSI	GCTCTTC	2 cut(s)	305, 375
PcsI	WCGNNNNNNNCGW	2 cut(s)	123, 1049
PctI	GAATGC	1 cut(s)	169
PdiI	GCCGGC	2 cut(s)	121, 948
PfeI	GAWTC	4 cut(s)	87, 350, 1312, 1508
PfoI	TCCNGGA	1 cut(s)	1247
PleI	GAGTC	6 cut(s)	122, 232, 763, 846, 1048, 1252
PluTI	GGCGCC	1 cut(s)	556
PpsI	GAGTC	6 cut(s)	122, 232, 763, 846, 1048, 1252
PpuMI	RGGWCCY	1 cut(s)	213
PshAI	GACNNNNGTC	1 cut(s)	223
Psp124BI	GAGCTC	3 cut(s)	189, 300, 749
Psp5II	RGGWCCY	1 cut(s)	213
Psp6I	CCWGG	3 cut(s)	27, 1212, 1247
PspGI	CCWGG	3 cut(s)	27, 1212, 1247
PspN4I	GGNNCC	7 cut(s)	214, 215, 246, 278, 554, 693, 1421
PspPI	GGNCC	4 cut(s)	31, 213, 325, 664
PspPPI	RGGWCCY	1 cut(s)	213
PstI	CTGCAG	1 cut(s)	1337
PstNI	CAGNNNCTG	1 cut(s)	1309
PsuI	RGATCY	3 cut(s)	457, 685, 691
PvuII	CAGCTG	1 cut(s)	1332
RsaI	GTAC	3 cut(s)	656, 740, 758
RsaNI	GTAC	3 cut(s)	655, 739, 757
RseI	CAYNNNNRTG	2 cut(s)	1165, 1227
SacI	GAGCTC	3 cut(s)	189, 300, 749
SapI	GCTCTTC	2 cut(s)	305, 375
SaqAI	TTAA	1 cut(s)	1466
Sau3AI	GATC	7 cut(s)	345, 457, 671, 685, 691, 1150, 1453
Sau96I	GGNCC	4 cut(s)	31, 213, 325, 664
SchI	GAGTC	6 cut(s)	122, 233, 763, 847, 1049, 1253
ScrFI	CCNGG	7 cut(s)	29, 175, 696, 843, 844, 1214, 1249
SduI	GDGCHC	7 cut(s)	189, 300, 399, 749, 925, 1237, 1379
SfaNI	GCATC	1 cut(s)	1188
SfcI	CTRYAG	3 cut(s)	1321, 1333, 1380
SfoI	GGCGCC	1 cut(s)	554
Sfr274I	CTCGAG	2 cut(s)	461, 748
SfuI	TTCGAA	3 cut(s)	369, 1052, 1315
SinI	GGWCC	1 cut(s)	213
SlaI	CTCGAG	2 cut(s)	461, 748
SmaI	CCCGGG	1 cut(s)	844
SmiMI	CAYNNNNRTG	2 cut(s)	1165, 1227
SmlI	CTYRAG	4 cut(s)	461, 748, 1236, 1465
SmoI	CTYRAG	4 cut(s)	461, 748, 1236, 1465
Sse9I	AATT	3 cut(s)	371, 1031, 1054
SspDI	GGCGCC	1 cut(s)	552
SspMI	CTAG	1 cut(s)	414
SstI	GAGCTC	3 cut(s)	189, 300, 749
StyD4I	CCNGG	7 cut(s)	27, 173, 694, 841, 842, 1212, 1247
StyI	CCWWGG	1 cut(s)	361
TaaI	ACNGT	4 cut(s)	62, 488, 1325, 1381
TaiI	ACGT	3 cut(s)	273, 1412, 1435
TasI	AATT	3 cut(s)	371, 1031, 1054
TauI	GCSGC	5 cut(s)	48, 149, 360, 892, 895
TfiI	GAWTC	4 cut(s)	87, 350, 1312, 1508
Tru1I	TTAA	1 cut(s)	1466
Tru9I	TTAA	1 cut(s)	1466
TscAI	CASTG	2 cut(s)	1330, 1384
TseFI	GTSAC	2 cut(s)	56, 62
TseI	GCWGC	7 cut(s)	195, 207, 1012, 1104, 1133, 1332, 1525
Tsp45I	GTSAC	2 cut(s)	56, 62
TspDTI	ATGAA	2 cut(s)	423, 458
TspGWI	ACGGA	3 cut(s)	698, 1004, 1037
TspMI	CCCGGG	1 cut(s)	842
TspRI	CASTG	2 cut(s)	1330, 1384
Vha464I	CTTAAG	1 cut(s)	1465
VpaK11BI	GGWCC	1 cut(s)	213
XapI	RAATTY	1 cut(s)	1054
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1220
XhoI	CTCGAG	2 cut(s)	461, 748
XmaI	CCCGGG	1 cut(s)	842
XspI	CTAG	1 cut(s)	414
ZraI	GACGTC	1 cut(s)	271

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.