Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0007641

Physical Location & Seq

Genomic Coordinates Forward (+)

4964798 .. 4967322

Gene Structure 2525 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G072800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 819 bp

ATGGAAAACGAGGATCAATATCAGCAATATGACTGCCTTCTATTTGATCTAGATGACACCCTATATCCTCAGAGTTCAGGGATTTCAGTACAAATCACTAAGAATATTCAAGAATATATGCTTCAAAAGCTTGGCATGAAGGAAAGTGAAGTTCCTGAATTGTGTATTTCATTATACAAGGATTACGGGACGACGATGGCTGGTCTTAAGGCTCAGGGCTATAACTTCGAGTATGATGACTTTCATAGTTTTGTTCATGGGAGGTTGCCCTACGATTCACTTAATCCTGACCCTATTCTCAGGGGTCTTTTACTTAGTCTACCTATCCGGAAAGTAATTTTCACAAATTCAGACAGGGCACATGCCGCTAGTGTGCTCGGGAAGCTTGGAATAGAGGACTGCTTTGAGATGATTATATGCTTCGAGACTCTGAATCCCACCAACAATGCTGATGATTCTGTTGGTGCCAAAGAAACTGAAAATACTGAACAACCAAATACTGGTTCTGTAATTTCAAAGACCCCAGTTGTGTGCAAACCGTTTGAGCGTGCATATGAAGAAACTTTTAAGATTGCAAACATCAACCCCAAAAGAACGTTATTCTTCGACGATAGCATTCGCAATTTGCAAACTGCAAAGGAGTTGGGGCTCCATACGGTAATGATTGGCACATCTCACCGAACTAAAGGTGCGGATCATGCATTTGAGAGCATCCATAATATCAAGGAAGCATTGCCAGAACTCTGGGAAACCACTGAACAGTGTGAAAATGTTCGATATTCGCGAGAGATTGCAATCGAACAACCAGTACAAGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Hydrolase_like

Protein Analysis

273

Amino Acids

30.87

Weight (kDa)

4.79

Isoelectric Point (pI)

43.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007641)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59480 AT5G59480 AT5G59480 AT5G59480 AT5G59480
fragaria_vesca	FvH4_3g36780 FvH4_3g36780 FvH4_3g36780 FvH4_3g36780 FvH4_3g36780
malus_domestica	MD11G1097600.v1.1
prunus_persica	Prupe.6G072800_v2.0.a1
pyrus_communis	pycom03g07020 pycom11g08230
rosa_chinensis	RchiOBHm_Chr5g0065831
rosa_laevigata	RLG00000035820
rosa_multiflora	Rmu_sc0042868.1_g000002
rosa_roxburghii	Rroxscaffold_1G00015320
rosa_rugosa	Rorug05G0374100
rosa_samantha	Rh5AG432800 Rh5BG449100 Rh5CG471300 Rh5DG462700
rosa_wichuraiana	Rw5G040590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	464
AccB7I	CCANNNNNTGG	1 cut(s)	500
AccI	GTMKAC	1 cut(s)	319
AccII	CGCG	1 cut(s)	784
AccIII	TCCGGA	1 cut(s)	327
AciI	CCGC	2 cut(s)	366, 692
AclI	AACGTT	1 cut(s)	596
AclWI	GGATC	2 cut(s)	21, 702
AcsI	RAATTY	1 cut(s)	346
AfaI	GTAC	2 cut(s)	90, 810
AfiI	CCNNNNNNNGG	1 cut(s)	500
AflII	CTTAAG	1 cut(s)	206
AgsI	TTSAA	3 cut(s)	110, 125, 516
AjuI	GAANNNNNNNTTGG	2 cut(s)	487, 519
AluBI	AGCT	3 cut(s)	130, 385, 815
AluI	AGCT	3 cut(s)	130, 385, 815
Alw21I	GWGCWC	1 cut(s)	378
Alw26I	GTCTC	1 cut(s)	419
AlwI	GGATC	2 cut(s)	21, 702
Ama87I	CYCGRG	1 cut(s)	377
Aor13HI	TCCGGA	1 cut(s)	327
ApoI	RAATTY	1 cut(s)	346
Asp700I	GAANNNNTTC	1 cut(s)	771
AsuHPI	GGTGA	1 cut(s)	668
AvaI	CYCGRG	1 cut(s)	377
BaeGI	GKGCMC	1 cut(s)	361
BanI	GGYRCC	1 cut(s)	464
BanII	GRGCYC	1 cut(s)	651
Bbv12I	GWGCWC	1 cut(s)	378
BccI	CCATC	1 cut(s)	190
BcoDI	GTCTC	1 cut(s)	419
BfaI	CTAG	2 cut(s)	50, 369
BfrI	CTTAAG	1 cut(s)	206
BisI	GCNGC	1 cut(s)	366
BlsI	GCNGC	1 cut(s)	367
BmeT110I	CYCGRG	1 cut(s)	377
BmiI	GGNNCC	2 cut(s)	466, 650
BmrI	ACTGGG	1 cut(s)	518
BmsI	GCATC	1 cut(s)	720
BmuI	ACTGGG	1 cut(s)	518
Bpu10I	CCTNAGC	1 cut(s)	213
BsaBI	GATNNNNATC	2 cut(s)	18, 794
BsaWI	WCCGGW	1 cut(s)	327
Bsc4I	CCNNNNNNNGG	1 cut(s)	500
Bse1I	ACTGG	3 cut(s)	505, 524, 806
Bse3DI	GCAATG	1 cut(s)	731
Bse8I	GATNNNNATC	2 cut(s)	18, 794
BseAI	TCCGGA	1 cut(s)	327
BseGI	GGATG	1 cut(s)	711
BseJI	GATNNNNATC	2 cut(s)	18, 794
BseLI	CCNNNNNNNGG	1 cut(s)	500
BseMI	GCAATG	1 cut(s)	731
BseMII	CTCAG	3 cut(s)	83, 227, 313
BseNI	ACTGG	3 cut(s)	505, 524, 806
BseSI	GKGCMC	1 cut(s)	361
Bsh1236I	CGCG	1 cut(s)	784
BshNI	GGYRCC	1 cut(s)	464
BsiHKAI	GWGCWC	1 cut(s)	378
BsiHKCI	CYCGRG	1 cut(s)	377
BsiSI	CCGG	1 cut(s)	328
BslFI	GGGAC	1 cut(s)	202
BslI	CCNNNNNNNGG	1 cut(s)	500
BsmAI	GTCTC	1 cut(s)	419
BsmFI	GGGAC	1 cut(s)	202
BsmI	GAATGC	1 cut(s)	615
BsoBI	CYCGRG	1 cut(s)	377
Bsp1286I	GDGCHC	3 cut(s)	361, 378, 651
Bsp13I	TCCGGA	1 cut(s)	327
Bsp143I	GATC	3 cut(s)	13, 46, 694
Bsp68I	TCGCGA	1 cut(s)	784
BspACI	CCGC	2 cut(s)	366, 692
BspCNI	CTCAG	3 cut(s)	82, 226, 312
BspEI	TCCGGA	1 cut(s)	327
BspFNI	CGCG	1 cut(s)	784
BspLI	GGNNCC	2 cut(s)	466, 650
BspPI	GGATC	2 cut(s)	21, 702
BspT107I	GGYRCC	1 cut(s)	464
BspTI	CTTAAG	1 cut(s)	206
BsrDI	GCAATG	1 cut(s)	731
BsrI	ACTGG	3 cut(s)	505, 524, 806
BssMI	GATC	3 cut(s)	13, 46, 694
Bst4CI	ACNGT	3 cut(s)	540, 658, 762
BstAFI	CTTAAG	1 cut(s)	206
BstC8I	GCNNGC	1 cut(s)	549
BstDEI	CTNAG	6 cut(s)	69, 99, 213, 299, 314, 816
BstF5I	GGATG	1 cut(s)	711
BstFNI	CGCG	1 cut(s)	784
BstKTI	GATC	3 cut(s)	16, 49, 697
BstMAI	GTCTC	1 cut(s)	419
BstMBI	GATC	3 cut(s)	13, 46, 694
BstMWI	GCNNNNNNNGC	4 cut(s)	127, 365, 382, 698
BstNSI	RCATGY	1 cut(s)	365
BstSLI	GKGCMC	1 cut(s)	361
BstUI	CGCG	1 cut(s)	784
BstXI	CCANNNNNNTGG	1 cut(s)	744
BtsCI	GGATG	1 cut(s)	711
BtsIMutI	CAGTG	2 cut(s)	753, 767
BtuMI	TCGCGA	1 cut(s)	784
Cac8I	GCNNGC	1 cut(s)	549
Csp6I	GTAC	2 cut(s)	89, 809
CviAII	CATG	4 cut(s)	136, 257, 362, 698
CviJI	RGCY	7 cut(s)	130, 200, 212, 219, 385, 649, 815
CviKI_1	RGCY	7 cut(s)	130, 200, 212, 219, 385, 649, 815
CviQI	GTAC	2 cut(s)	89, 809
DdeI	CTNAG	6 cut(s)	69, 99, 213, 299, 314, 816
DpnI	GATC	3 cut(s)	15, 48, 696
DpnII	GATC	3 cut(s)	13, 46, 694
Eco24I	GRGCYC	1 cut(s)	651
Eco88I	CYCGRG	1 cut(s)	377
EcoT22I	ATGCAT	1 cut(s)	703
EcoT38I	GRGCYC	1 cut(s)	651
FaeI	CATG	4 cut(s)	139, 260, 365, 701
FaqI	GGGAC	1 cut(s)	202
FatI	CATG	4 cut(s)	135, 256, 361, 697
FauNDI	CATATG	1 cut(s)	553
FblI	GTMKAC	1 cut(s)	319
Fnu4HI	GCNGC	1 cut(s)	366
FokI	GGATG	1 cut(s)	698
FriOI	GRGCYC	1 cut(s)	651
Fsp4HI	GCNGC	1 cut(s)	366
FspBI	CTAG	2 cut(s)	50, 369
GluI	GCNGC	1 cut(s)	366
HapII	CCGG	1 cut(s)	328
Hin1II	CATG	4 cut(s)	139, 260, 365, 701
HindIII	AAGCTT	3 cut(s)	128, 383, 813
HinfI	GANTC	4 cut(s)	275, 427, 433, 455
HpaII	CCGG	1 cut(s)	328
HphI	GGTGA	1 cut(s)	668
Hpy166II	GTNNAC	1 cut(s)	320
Hpy188I	TCNGA	3 cut(s)	72, 352, 432
Hpy188III	TCNNGA	8 cut(s)	50, 110, 155, 287, 328, 379, 424, 783
Hpy8I	GTNNAC	1 cut(s)	320
Hpy99I	CGWCG	2 cut(s)	196, 611
HpyAV	CCTTC	2 cut(s)	47, 133
HpyCH4III	ACNGT	3 cut(s)	540, 658, 762
HpyCH4IV	ACGT	1 cut(s)	596
HpyCH4V	TGCA	7 cut(s)	534, 551, 575, 628, 635, 701, 794
HpyF10VI	GCNNNNNNNGC	4 cut(s)	127, 365, 382, 698
HpyF3I	CTNAG	6 cut(s)	69, 99, 213, 299, 314, 816
HpySE526I	ACGT	1 cut(s)	596
Hsp92II	CATG	4 cut(s)	139, 260, 365, 701
Kpn2I	TCCGGA	1 cut(s)	327
Kzo9I	GATC	3 cut(s)	13, 46, 694
LmnI	GCTCC	1 cut(s)	654
LweI	GCATC	1 cut(s)	720
MaeI	CTAG	2 cut(s)	50, 369
MaeII	ACGT	1 cut(s)	596
MalI	GATC	3 cut(s)	15, 48, 696
MboI	GATC	3 cut(s)	13, 46, 694
MboII	GAAGA	2 cut(s)	569, 595
MhlI	GDGCHC	3 cut(s)	361, 378, 651
MluCI	AATT	5 cut(s)	158, 336, 346, 510, 622
MlyI	GAGTC	1 cut(s)	421
MnlI	CCTC	4 cut(s)	4, 78, 255, 388
Mph1103I	ATGCAT	1 cut(s)	703
MroI	TCCGGA	1 cut(s)	327
MroXI	GAANNNNTTC	1 cut(s)	771
MseI	TTAA	3 cut(s)	207, 282, 567
MspCI	CTTAAG	1 cut(s)	206
MspI	CCGG	1 cut(s)	328
Mva1269I	GAATGC	1 cut(s)	615
MvnI	CGCG	1 cut(s)	784
MwoI	GCNNNNNNNGC	4 cut(s)	127, 365, 382, 698
NdeI	CATATG	1 cut(s)	553
NdeII	GATC	3 cut(s)	13, 46, 694
NlaIII	CATG	4 cut(s)	139, 260, 365, 701
NlaIV	GGNNCC	2 cut(s)	466, 650
NruI	TCGCGA	1 cut(s)	784
NsiI	ATGCAT	1 cut(s)	703
NspI	RCATGY	1 cut(s)	365
PcsI	WCGNNNNNNNCGW	1 cut(s)	781
PctI	GAATGC	1 cut(s)	615
PdmI	GAANNNNTTC	1 cut(s)	771
PfeI	GAWTC	3 cut(s)	275, 433, 455
PflMI	CCANNNNNTGG	1 cut(s)	500
PkrI	GCNGC	1 cut(s)	367
PleI	GAGTC	1 cut(s)	421
PpsI	GAGTC	1 cut(s)	421
Psp1406I	AACGTT	1 cut(s)	596
PspN4I	GGNNCC	2 cut(s)	466, 650
PsrI	GAACNNNNNNTAC	1 cut(s)	792
RruI	TCGCGA	1 cut(s)	784
RsaI	GTAC	2 cut(s)	90, 810
RsaNI	GTAC	2 cut(s)	89, 809
SaqAI	TTAA	3 cut(s)	207, 282, 567
SatI	GCNGC	1 cut(s)	366
Sau3AI	GATC	3 cut(s)	13, 46, 694
SchI	GAGTC	1 cut(s)	421
SduI	GDGCHC	3 cut(s)	361, 378, 651
SetI	ASST	7 cut(s)	132, 266, 325, 387, 599, 691, 817
SfaNI	GCATC	1 cut(s)	720
SmlI	CTYRAG	1 cut(s)	206
SmoI	CTYRAG	1 cut(s)	206
Sse9I	AATT	5 cut(s)	158, 336, 346, 510, 622
SsiI	CCGC	2 cut(s)	366, 692
SspI	AATATT	1 cut(s)	106
SspMI	CTAG	2 cut(s)	50, 369
TaaI	ACNGT	3 cut(s)	540, 658, 762
TaiI	ACGT	1 cut(s)	599
TaqI	TCGA	5 cut(s)	228, 423, 606, 775, 798
TasI	AATT	5 cut(s)	158, 336, 346, 510, 622
TatI	WGTACW	2 cut(s)	88, 808
TauI	GCSGC	1 cut(s)	368
TfiI	GAWTC	3 cut(s)	275, 433, 455
Tru1I	TTAA	3 cut(s)	207, 282, 567
Tru9I	TTAA	3 cut(s)	207, 282, 567
TscAI	CASTG	2 cut(s)	760, 767
TspDTI	ATGAA	5 cut(s)	152, 159, 233, 245, 570
TspRI	CASTG	2 cut(s)	760, 767
Van91I	CCANNNNNTGG	1 cut(s)	500
Vha464I	CTTAAG	1 cut(s)	206
XapI	RAATTY	1 cut(s)	346
XbaI	TCTAGA	1 cut(s)	49
XceI	RCATGY	1 cut(s)	365
XmiI	GTMKAC	1 cut(s)	319
XmnI	GAANNNNTTC	1 cut(s)	771
XspI	CTAG	2 cut(s)	50, 369
Zsp2I	ATGCAT	1 cut(s)	703

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.