Prupe.6G098600_v2.0.a1
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0016803
Physical Location & Seq
Reverse (-)
6857507 .. 6859210
1704 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G098600.1

Sequence Viewer

Length: 1047 bp
ATGGAGAAAGAGTCAACGTTTCCCTCTTCAGCTTTGCAATTATTACCTCCTGGTTTCAAATTCCATCCCTCTGATGAAGAACTCATTGTTCATTACTTGCGAAACAAAGTGATTTCGCATCCGCTTCCAGCGCAGTTGATCACTGAAATCAATCTCTATAAGTATAATCCGTGGGAGCTACCCAACAATGCTTTTTTTGGAGAAGATGAATGGTATTTCTTCAGCCCGAGGGACCGGAAGTATCCAAATGGGGTGAGGCCAAATAGAGCAGCAGCTTCAGGCTATTGGAAGGCTGCTAGCAGTGACAAGCCAATTCTCACCTCTCGTGGATCGAAGCGCATCGGGGTGAAGAAGGCTCTAGTCTTTTACACTGGTCGTGCTCCAAAAGGAGTTAAAACTGAATGGATCATGAACGAATATAGACTGCTTGACGATACCGTTAAACCATCAAGGTTAAAAGGGTCTATGAGATTGGATGATTGGGTACTATGTCGAGTTCAACACAGAGGAAACAGATCAAAGAACGCATGCAACAGTCAAGACAGCTATAGCACAGAATTTTGGAGGTACCCACCAAAAGTTGAGCAGACACAGCCTACATATGCAAACCTTCATGCTGATATTATCACCGATTTTCCATATAAAGACTGCCAACTATTAGCTTCCATACTTTCCAGTCAAGCTCCATCTCCAACAGAGACCAATTCAAGCGTGAGCTTTCAAGGGAGCAAAGATAGCTATGAAGTTCGTTCAAATAATATGGTAAAATCAACAATATCAATTTCTTCTTCGGGCATTGATTCCAACACACTAAAAATGAAAACTACAGAAGAAAATATGAAAGAAAATCACTTTCCACTCATCAACAATCGAGAAAGCAAGAAAATAGATGAGAATCTTCCGCCTAGCATGAGACCGGCAGGCAACGCTATCAACTGCTACATCCCAAACCACTCCCAGTATGACCTACTCAATGCTCATCCAACCGATCCCACCAACTTTGAGGAGTTTAATGAAATGACCTTCCCAGGTACGTACTTCGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

349

Amino Acids

39.83

Weight (kDa)

8.18

Isoelectric Point (pI)

42.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016803)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g32720
malus_domestica MD03G1115100.v1.1 MD11G1133000.v1.1
prunus_persica Prupe.6G098600_v2.0.a1
pyrus_communis pycom11g10980
rosa_chinensis RchiOBHm_Chr5g0059781
rosa_laevigata RLG00000035329
rosa_multiflora Rmu_sc0000660.1_g000020
rosa_roxburghii Rroxscaffold_1G00020790
rosa_samantha Rh5AG390500 Rh5BG402000 Rh5CG426000 Rh5DG418400
rosa_wichuraiana Rw5G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 567
AccB1I GGYRCC 1 cut(s) 567
AciI CCGC 2 cut(s) 122, 902
AclI AACGTT 1 cut(s) 17
AclWI GGATC 3 cut(s) 337, 413, 983
AcsI RAATTY 2 cut(s) 59, 557
AcuI CTGAAG 3 cut(s) 12, 205, 261
AfaI GTAC 4 cut(s) 486, 569, 1033, 1037
AgsI TTSAA 5 cut(s) 58, 500, 708, 722, 753
AjnI CCWGG 2 cut(s) 49, 1027
AluBI AGCT 8 cut(s) 32, 178, 275, 546, 662, 683, 717, 738
AluI AGCT 8 cut(s) 32, 178, 275, 546, 662, 683, 717, 738
Alw21I GWGCWC 1 cut(s) 382
Alw26I GTCTC 2 cut(s) 692, 907
AlwI GGATC 3 cut(s) 337, 413, 983
Ama87I CYCGRG 1 cut(s) 226
AoxI GGCC 1 cut(s) 257
ApeKI GCWGC 3 cut(s) 269, 272, 293
ApoI RAATTY 2 cut(s) 59, 557
Asp718I GGTACC 1 cut(s) 567
AspLEI GCGC 2 cut(s) 133, 339
AspS9I GGNCC 1 cut(s) 232
AsuHPI GGTGA 4 cut(s) 265, 310, 358, 619
AsuNHI GCTAGC 1 cut(s) 296
AvaI CYCGRG 1 cut(s) 226
AvaII GGWCC 1 cut(s) 232
BanI GGYRCC 1 cut(s) 567
BauI CACGAG 1 cut(s) 324
Bbv12I GWGCWC 1 cut(s) 382
BbvI GCAGC 3 cut(s) 280, 281, 284
BccI CCATC 3 cut(s) 72, 454, 694
BciT130I CCWGG 2 cut(s) 51, 1029
BciVI GTATCC 1 cut(s) 252
BclI TGATCA 1 cut(s) 138
BcoDI GTCTC 2 cut(s) 692, 907
BfaI CTAG 3 cut(s) 297, 359, 906
BfmI CTRYAG 2 cut(s) 547, 825
BfuI GTATCC 1 cut(s) 252
BisI GCNGC 3 cut(s) 270, 273, 294
BlsI GCNGC 3 cut(s) 271, 274, 295
Bme1390I CCNGG 2 cut(s) 51, 1029
Bme18I GGWCC 1 cut(s) 232
BmeT110I CYCGRG 1 cut(s) 226
BmgT120I GGNCC 1 cut(s) 232
BmiI GGNNCC 2 cut(s) 233, 569
BmrFI CCNGG 2 cut(s) 51, 1029
BmrI ACTGGG 1 cut(s) 952
BmsI GCATC 2 cut(s) 127, 348
BmtI GCTAGC 1 cut(s) 300
BmuI ACTGGG 1 cut(s) 952
BsaAI YACGTR 1 cut(s) 1035
BsaBI GATNNNNATC 1 cut(s) 894
BsaI GGTCTC 2 cut(s) 692, 907
BsaJI CCNNGG 3 cut(s) 170, 227, 1027
BsaWI WCCGGW 1 cut(s) 234
BsaXI ACNNNNNCTCC 1 cut(s) 26
Bse118I RCCGGY 1 cut(s) 916
Bse1I ACTGG 3 cut(s) 376, 675, 958
Bse8I GATNNNNATC 1 cut(s) 894
BseBI CCWGG 2 cut(s) 51, 1029
BseDI CCNNGG 3 cut(s) 170, 227, 1027
BseGI GGATG 5 cut(s) 64, 118, 481, 942, 979
BseJI GATNNNNATC 1 cut(s) 894
BseNI ACTGG 3 cut(s) 376, 675, 958
BseRI GAGGAG 1 cut(s) 1019
BseXI GCAGC 3 cut(s) 280, 281, 284
BshFI GGCC 1 cut(s) 259
BshNI GGYRCC 1 cut(s) 567
BsiHKAI GWGCWC 1 cut(s) 382
BsiHKCI CYCGRG 1 cut(s) 226
BsiSI CCGG 2 cut(s) 235, 917
BslFI GGGAC 1 cut(s) 245
BsmAI GTCTC 2 cut(s) 692, 907
BsmFI GGGAC 1 cut(s) 245
BsnI GGCC 1 cut(s) 259
Bso31I GGTCTC 2 cut(s) 692, 907
BsoBI CYCGRG 1 cut(s) 226
Bsp1286I GDGCHC 1 cut(s) 382
Bsp143I GATC 5 cut(s) 138, 329, 405, 515, 988
BspACI CCGC 2 cut(s) 122, 902
BspANI GGCC 1 cut(s) 259
BspHI TCATGA 1 cut(s) 408
BspLI GGNNCC 2 cut(s) 233, 569
BspOI GCTAGC 1 cut(s) 300
BspPI GGATC 3 cut(s) 337, 413, 983
BspT107I GGYRCC 1 cut(s) 567
BspTNI GGTCTC 2 cut(s) 692, 907
BsrFI RCCGGY 1 cut(s) 916
BsrI ACTGG 3 cut(s) 376, 675, 958
BssAI RCCGGY 1 cut(s) 916
BssECI CCNNGG 3 cut(s) 170, 227, 1027
BssMI GATC 5 cut(s) 138, 329, 405, 515, 988
BssSI CACGAG 1 cut(s) 324
Bst2BI CACGAG 1 cut(s) 324
Bst2UI CCWGG 2 cut(s) 51, 1029
Bst4CI ACNGT 2 cut(s) 439, 536
Bst6I CTCTTC 1 cut(s) 31
BstBAI YACGTR 1 cut(s) 1035
BstC8I GCNNGC 3 cut(s) 298, 529, 922
BstDSI CCRYGG 1 cut(s) 170
BstF5I GGATG 5 cut(s) 64, 118, 481, 942, 979
BstHHI GCGC 2 cut(s) 133, 339
BstKTI GATC 5 cut(s) 141, 332, 408, 518, 991
BstMAI GTCTC 2 cut(s) 692, 907
BstMBI GATC 5 cut(s) 138, 329, 405, 515, 988
BstMWI GCNNNNNNNGC 4 cut(s) 130, 592, 735, 926
BstNI CCWGG 2 cut(s) 51, 1029
BstNSI RCATGY 1 cut(s) 531
BstSCI CCNGG 2 cut(s) 49, 1027
BstSFI CTRYAG 2 cut(s) 547, 825
BstSNI TACGTA 1 cut(s) 1035
BstV1I GCAGC 3 cut(s) 280, 281, 284
BsuI GTATCC 1 cut(s) 252
BsuRI GGCC 1 cut(s) 259
BtgI CCRYGG 1 cut(s) 170
BtsCI GGATG 5 cut(s) 64, 118, 481, 942, 979
BtsI GCAGTG 1 cut(s) 307
BtsIMutI CAGTG 3 cut(s) 141, 307, 369
Cac8I GCNNGC 3 cut(s) 298, 529, 922
CciI TCATGA 1 cut(s) 408
CfoI GCGC 2 cut(s) 133, 339
Cfr10I RCCGGY 1 cut(s) 916
Cfr13I GGNCC 1 cut(s) 232
Csp6I GTAC 4 cut(s) 485, 568, 1032, 1036
CspCI CAANNNNNGTGG 2 cut(s) 982, 1017
CviAII CATG 4 cut(s) 409, 528, 614, 910
CviQI GTAC 4 cut(s) 485, 568, 1032, 1036
DpnI GATC 5 cut(s) 140, 331, 407, 517, 990
DpnII GATC 5 cut(s) 138, 329, 405, 515, 988
Eam1104I CTCTTC 1 cut(s) 31
EarI CTCTTC 1 cut(s) 31
EciI GGCGGA 1 cut(s) 891
Eco105I TACGTA 1 cut(s) 1035
Eco31I GGTCTC 2 cut(s) 692, 907
Eco47I GGWCC 1 cut(s) 232
Eco57I CTGAAG 3 cut(s) 12, 205, 261
Eco88I CYCGRG 1 cut(s) 226
EcoRII CCWGG 2 cut(s) 49, 1027
FaeI CATG 4 cut(s) 412, 531, 617, 913
FaqI GGGAC 1 cut(s) 245
FatI CATG 4 cut(s) 408, 527, 613, 909
FauNDI CATATG 1 cut(s) 601
FbaI TGATCA 1 cut(s) 138
Fnu4HI GCNGC 3 cut(s) 270, 273, 294
FokI GGATG 5 cut(s) 51, 105, 488, 929, 966
Fsp4HI GCNGC 3 cut(s) 270, 273, 294
FspBI CTAG 3 cut(s) 297, 359, 906
GlaI GCGC 2 cut(s) 132, 338
GluI GCNGC 3 cut(s) 270, 273, 294
HaeIII GGCC 1 cut(s) 259
HapII CCGG 2 cut(s) 235, 917
HhaI GCGC 2 cut(s) 133, 339
Hin1II CATG 4 cut(s) 412, 531, 617, 913
Hin6I GCGC 2 cut(s) 131, 337
HinP1I GCGC 2 cut(s) 131, 337
HincII GTYRAC 1 cut(s) 15
HindII GTYRAC 1 cut(s) 15
HinfI GANTC 3 cut(s) 11, 800, 895
HpaII CCGG 2 cut(s) 235, 917
HphI GGTGA 4 cut(s) 265, 310, 358, 619
Hpy166II GTNNAC 1 cut(s) 15
Hpy188I TCNGA 1 cut(s) 73
Hpy188III TCNNGA 3 cut(s) 409, 539, 872
Hpy8I GTNNAC 1 cut(s) 15
HpyAV CCTTC 4 cut(s) 283, 346, 620, 1033
HpyCH4III ACNGT 2 cut(s) 439, 536
HpyCH4IV ACGT 2 cut(s) 17, 1034
HpyCH4V TGCA 3 cut(s) 37, 531, 605
HpyF10VI GCNNNNNNNGC 4 cut(s) 130, 592, 735, 926
HpySE526I ACGT 2 cut(s) 17, 1034
Hsp92II CATG 4 cut(s) 412, 531, 617, 913
HspAI GCGC 2 cut(s) 131, 337
KpnI GGTACC 1 cut(s) 571
Ksp22I TGATCA 1 cut(s) 138
Kzo9I GATC 5 cut(s) 138, 329, 405, 515, 988
LmnI GCTCC 4 cut(s) 175, 385, 688, 726
Lsp1109I GCAGC 3 cut(s) 280, 281, 284
LweI GCATC 2 cut(s) 127, 348
MaeI CTAG 3 cut(s) 297, 359, 906
MaeII ACGT 2 cut(s) 17, 1034
MaeIII GTNAC 1 cut(s) 302
MalI GATC 5 cut(s) 140, 331, 407, 517, 990
MboI GATC 5 cut(s) 138, 329, 405, 515, 988
MboII GAAGA 9 cut(s) 18, 89, 211, 215, 361, 777, 780, 842, 890
MhlI GDGCHC 1 cut(s) 382
MluCI AATT 6 cut(s) 38, 59, 312, 557, 703, 780
MlyI GAGTC 1 cut(s) 20
MmeI TCCRAC 3 cut(s) 716, 828, 1007
MnlI CCTC 9 cut(s) 34, 57, 79, 222, 249, 331, 500, 558, 997
MseI TTAA 4 cut(s) 393, 441, 455, 1011
MslI CAYNNNNRTG 1 cut(s) 344
MspI CCGG 2 cut(s) 235, 917
MspR9I CCNGG 2 cut(s) 51, 1029
MvaI CCWGG 2 cut(s) 51, 1029
MwoI GCNNNNNNNGC 4 cut(s) 130, 592, 735, 926
NdeI CATATG 1 cut(s) 601
NdeII GATC 5 cut(s) 138, 329, 405, 515, 988
NheI GCTAGC 1 cut(s) 296
NlaIII CATG 4 cut(s) 412, 531, 617, 913
NlaIV GGNNCC 2 cut(s) 233, 569
NmuCI GTSAC 1 cut(s) 302
NspI RCATGY 1 cut(s) 531
PaeI GCATGC 1 cut(s) 531
PagI TCATGA 1 cut(s) 408
PfeI GAWTC 2 cut(s) 800, 895
PkrI GCNGC 3 cut(s) 271, 274, 295
PleI GAGTC 1 cut(s) 19
PpsI GAGTC 1 cut(s) 19
Ppu21I YACGTR 1 cut(s) 1035
Psp1406I AACGTT 1 cut(s) 17
Psp6I CCWGG 2 cut(s) 49, 1027
PspGI CCWGG 2 cut(s) 49, 1027
PspN4I GGNNCC 2 cut(s) 233, 569
PspPI GGNCC 1 cut(s) 232
RsaI GTAC 4 cut(s) 486, 569, 1033, 1037
RsaNI GTAC 4 cut(s) 485, 568, 1032, 1036
RseI CAYNNNNRTG 1 cut(s) 344
SaqAI TTAA 4 cut(s) 393, 441, 455, 1011
SatI GCNGC 3 cut(s) 270, 273, 294
Sau3AI GATC 5 cut(s) 138, 329, 405, 515, 988
Sau96I GGNCC 1 cut(s) 232
SchI GAGTC 1 cut(s) 20
ScrFI CCNGG 2 cut(s) 51, 1029
SduI GDGCHC 1 cut(s) 382
SfaNI GCATC 2 cut(s) 127, 348
SfcI CTRYAG 2 cut(s) 547, 825
SinI GGWCC 1 cut(s) 232
SmiMI CAYNNNNRTG 1 cut(s) 344
SnaBI TACGTA 1 cut(s) 1035
SphI GCATGC 1 cut(s) 531
Sse9I AATT 6 cut(s) 38, 59, 312, 557, 703, 780
SsiI CCGC 2 cut(s) 122, 902
SspMI CTAG 3 cut(s) 297, 359, 906
StyD4I CCNGG 2 cut(s) 49, 1027
TaaI ACNGT 2 cut(s) 439, 536
TaiI ACGT 2 cut(s) 20, 1037
TaqI TCGA 4 cut(s) 332, 493, 871, 1041
TasI AATT 6 cut(s) 38, 59, 312, 557, 703, 780
TfiI GAWTC 2 cut(s) 800, 895
Tru1I TTAA 4 cut(s) 393, 441, 455, 1011
Tru9I TTAA 4 cut(s) 393, 441, 455, 1011
TscAI CASTG 3 cut(s) 148, 307, 376
TseFI GTSAC 1 cut(s) 302
TseI GCWGC 3 cut(s) 269, 272, 293
Tsp45I GTSAC 1 cut(s) 302
TspDTI ATGAA 9 cut(s) 80, 90, 222, 425, 602, 756, 833, 854, 1029
TspGWI ACGGA 1 cut(s) 159
TspRI CASTG 3 cut(s) 148, 307, 376
VpaK11BI GGWCC 1 cut(s) 232
XapI RAATTY 2 cut(s) 59, 557
XceI RCATGY 1 cut(s) 531
XspI CTAG 3 cut(s) 297, 359, 906
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.