39S ribosomal protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G39800 AT5G40080 |
| fragaria_vesca | FvH4_2g10720 FvH4_5g36580 FvH4_5g36580 |
| malus_domestica | MD02G1257900.v1.1 MD08G1188400.v1.1 |
| prunus_persica | Prupe.1G522900_v2.0.a1 Prupe.1G522900_v2.0.a1 Prupe.6G102500_v2.0.a1 |
| pyrus_communis | pycom02g21900 pycom08g16210 |
| rosa_chinensis | RchiOBHm_Chr3g0492081 RchiOBHm_Chr7g0242281 |
| rosa_multiflora | Rmu_sc0021983.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00222810 Rroxscaffold_6G00392550 |
| rosa_rugosa | Rorug03G0251800 |
| rosa_samantha | Rh3AG301900 Rh3BG337800 Rh3CG335300 Rh3DG337400 Rh7BG439700 Rh7CG486500 Rh7DG454900 |
| rosa_wichuraiana | Rw0G009490 Rw3G026650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 256 |
| AclWI | GGATC | 1 cut(s) | 274 |
| AgsI | TTSAA | 1 cut(s) | 208 |
| AhlI | ACTAGT | 1 cut(s) | 251 |
| AluBI | AGCT | 2 cut(s) | 146, 211 |
| AluI | AGCT | 2 cut(s) | 146, 211 |
| AlwI | GGATC | 1 cut(s) | 274 |
| ApeKI | GCWGC | 1 cut(s) | 160 |
| AspLEI | GCGC | 1 cut(s) | 51 |
| BaeGI | GKGCMC | 2 cut(s) | 88, 236 |
| BbvI | GCAGC | 1 cut(s) | 172 |
| BcuI | ACTAGT | 1 cut(s) | 251 |
| BfaI | CTAG | 4 cut(s) | 20, 26, 138, 252 |
| BisI | GCNGC | 1 cut(s) | 161 |
| BlsI | GCNGC | 1 cut(s) | 162 |
| BsaJI | CCNNGG | 1 cut(s) | 89 |
| BseDI | CCNNGG | 1 cut(s) | 89 |
| BseMII | CTCAG | 1 cut(s) | 242 |
| BseSI | GKGCMC | 2 cut(s) | 88, 236 |
| BseXI | GCAGC | 1 cut(s) | 172 |
| BsgI | GTGCAG | 1 cut(s) | 179 |
| BslFI | GGGAC | 3 cut(s) | 24, 107, 173 |
| BsmFI | GGGAC | 3 cut(s) | 24, 107, 173 |
| Bsp1286I | GDGCHC | 2 cut(s) | 88, 236 |
| Bsp143I | GATC | 1 cut(s) | 266 |
| BspCNI | CTCAG | 1 cut(s) | 241 |
| BspPI | GGATC | 1 cut(s) | 274 |
| BssECI | CCNNGG | 1 cut(s) | 89 |
| BssMI | GATC | 1 cut(s) | 266 |
| BssT1I | CCWWGG | 1 cut(s) | 89 |
| BstC8I | GCNNGC | 1 cut(s) | 119 |
| BstDEI | CTNAG | 2 cut(s) | 147, 228 |
| BstHHI | GCGC | 1 cut(s) | 51 |
| BstKTI | GATC | 1 cut(s) | 269 |
| BstMBI | GATC | 1 cut(s) | 266 |
| BstSLI | GKGCMC | 2 cut(s) | 88, 236 |
| BstV1I | GCAGC | 1 cut(s) | 172 |
| BtgZI | GCGATG | 1 cut(s) | 42 |
| BtsIMutI | CAGTG | 1 cut(s) | 236 |
| Cac8I | GCNNGC | 1 cut(s) | 119 |
| CfoI | GCGC | 1 cut(s) | 51 |
| CviJI | RGCY | 4 cut(s) | 25, 121, 146, 211 |
| CviKI_1 | RGCY | 4 cut(s) | 25, 121, 146, 211 |
| DdeI | CTNAG | 2 cut(s) | 147, 228 |
| DpnI | GATC | 1 cut(s) | 268 |
| DpnII | GATC | 1 cut(s) | 266 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 256 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 256 |
| Eco130I | CCWWGG | 1 cut(s) | 89 |
| EcoT14I | CCWWGG | 1 cut(s) | 89 |
| ErhI | CCWWGG | 1 cut(s) | 89 |
| FaiI | YATR | 4 cut(s) | 153, 183, 220, 222 |
| FaqI | GGGAC | 3 cut(s) | 24, 107, 173 |
| FauNDI | CATATG | 1 cut(s) | 220 |
| Fnu4HI | GCNGC | 1 cut(s) | 161 |
| Fsp4HI | GCNGC | 1 cut(s) | 161 |
| FspBI | CTAG | 4 cut(s) | 20, 26, 138, 252 |
| GlaI | GCGC | 1 cut(s) | 50 |
| GluI | GCNGC | 1 cut(s) | 161 |
| HhaI | GCGC | 1 cut(s) | 51 |
| Hin6I | GCGC | 1 cut(s) | 49 |
| HinP1I | GCGC | 1 cut(s) | 49 |
| HinfI | GANTC | 1 cut(s) | 257 |
| Hpy188III | TCNNGA | 1 cut(s) | 247 |
| Hpy99I | CGWCG | 1 cut(s) | 45 |
| HpyAV | CCTTC | 1 cut(s) | 24 |
| HpyCH4IV | ACGT | 1 cut(s) | 82 |
| HpyCH4V | TGCA | 2 cut(s) | 117, 160 |
| HpyF3I | CTNAG | 2 cut(s) | 147, 228 |
| HpySE526I | ACGT | 1 cut(s) | 82 |
| HspAI | GCGC | 1 cut(s) | 49 |
| Kzo9I | GATC | 1 cut(s) | 266 |
| LpnPI | CCDG | 3 cut(s) | 149, 204, 249 |
| Lsp1109I | GCAGC | 1 cut(s) | 172 |
| MaeI | CTAG | 4 cut(s) | 20, 26, 138, 252 |
| MaeII | ACGT | 1 cut(s) | 82 |
| MalI | GATC | 1 cut(s) | 268 |
| MboI | GATC | 1 cut(s) | 266 |
| MboII | GAAGA | 1 cut(s) | 121 |
| MhlI | GDGCHC | 2 cut(s) | 88, 236 |
| MluCI | AATT | 2 cut(s) | 112, 170 |
| MlyI | GAGTC | 1 cut(s) | 266 |
| MnlI | CCTC | 1 cut(s) | 85 |
| MseI | TTAA | 1 cut(s) | 197 |
| NdeI | CATATG | 1 cut(s) | 220 |
| NdeII | GATC | 1 cut(s) | 266 |
| PkrI | GCNGC | 1 cut(s) | 162 |
| PleI | GAGTC | 1 cut(s) | 265 |
| PpsI | GAGTC | 1 cut(s) | 265 |
| SaqAI | TTAA | 1 cut(s) | 197 |
| SatI | GCNGC | 1 cut(s) | 161 |
| Sau3AI | GATC | 1 cut(s) | 266 |
| SchI | GAGTC | 1 cut(s) | 266 |
| SduI | GDGCHC | 2 cut(s) | 88, 236 |
| SetI | ASST | 4 cut(s) | 85, 148, 178, 213 |
| SpeI | ACTAGT | 1 cut(s) | 251 |
| Sse9I | AATT | 2 cut(s) | 112, 170 |
| SspMI | CTAG | 4 cut(s) | 20, 26, 138, 252 |
| StyI | CCWWGG | 1 cut(s) | 89 |
| TaiI | ACGT | 1 cut(s) | 85 |
| TaqI | TCGA | 1 cut(s) | 43 |
| TasI | AATT | 2 cut(s) | 112, 170 |
| Tru1I | TTAA | 1 cut(s) | 197 |
| Tru9I | TTAA | 1 cut(s) | 197 |
| TscAI | CASTG | 1 cut(s) | 236 |
| TseI | GCWGC | 1 cut(s) | 160 |
| TspRI | CASTG | 1 cut(s) | 236 |
| XspI | CTAG | 4 cut(s) | 20, 26, 138, 252 |