Cyanobacterial and plant NDH-1 subunit O
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G74880 |
| fragaria_vesca | FvH4_1g24330 FvH4_1g24330 FvH4_1g24330 |
| malus_domestica | MD01G1003600.v1.1 |
| prunus_persica | Prupe.6G157800_v2.0.a1 |
| pyrus_communis | pycom01g02350 |
| rosa_chinensis | RchiOBHm_Chr2g0120841 |
| rosa_laevigata | RLG00000018594 |
| rosa_multiflora | Rmu_sc0000621.1_g000009 |
| rosa_roxburghii | Rroxscaffold_2G00122790 |
| rosa_rugosa | Rorug02G0232000 Rorug02G0232000 Rorug02G0232100 |
| rosa_samantha | Rh2AG288600 Rh2BG299600 Rh2CG277600 Rh2DG313700 |
| rosa_wichuraiana | Rw2G023120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 409 |
| AccB1I | GGYRCC | 1 cut(s) | 409 |
| AccI | GTMKAC | 1 cut(s) | 164 |
| AccII | CGCG | 1 cut(s) | 345 |
| AciI | CCGC | 2 cut(s) | 343, 345 |
| AfaI | GTAC | 2 cut(s) | 354, 411 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 51, 349 |
| AgsI | TTSAA | 1 cut(s) | 186 |
| AluBI | AGCT | 3 cut(s) | 104, 113, 197 |
| AluI | AGCT | 3 cut(s) | 104, 113, 197 |
| Alw26I | GTCTC | 2 cut(s) | 368, 469 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 122 |
| ApeKI | GCWGC | 1 cut(s) | 113 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 35 |
| Asp718I | GGTACC | 1 cut(s) | 409 |
| AspLEI | GCGC | 1 cut(s) | 421 |
| AsuHPI | GGTGA | 2 cut(s) | 359, 392 |
| BanI | GGYRCC | 1 cut(s) | 409 |
| BbsI | GAAGAC | 1 cut(s) | 345 |
| BbvI | GCAGC | 1 cut(s) | 100 |
| BcoDI | GTCTC | 2 cut(s) | 368, 469 |
| BfmI | CTRYAG | 1 cut(s) | 114 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 427 |
| BisI | GCNGC | 1 cut(s) | 114 |
| BlsI | GCNGC | 1 cut(s) | 115 |
| BmiI | GGNNCC | 2 cut(s) | 56, 411 |
| BmsI | GCATC | 2 cut(s) | 310, 432 |
| BpiI | GAAGAC | 1 cut(s) | 345 |
| BpuEI | CTTGAG | 1 cut(s) | 88 |
| BsaBI | GATNNNNATC | 1 cut(s) | 446 |
| BsaJI | CCNNGG | 1 cut(s) | 343 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 51, 349 |
| Bse1I | ACTGG | 2 cut(s) | 360, 382 |
| Bse8I | GATNNNNATC | 1 cut(s) | 446 |
| BseDI | CCNNGG | 1 cut(s) | 343 |
| BseGI | GGATG | 2 cut(s) | 41, 301 |
| BseJI | GATNNNNATC | 1 cut(s) | 446 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 51, 349 |
| BseMII | CTCAG | 2 cut(s) | 41, 429 |
| BseNI | ACTGG | 2 cut(s) | 360, 382 |
| BseXI | GCAGC | 1 cut(s) | 100 |
| Bsh1236I | CGCG | 1 cut(s) | 345 |
| BshNI | GGYRCC | 1 cut(s) | 409 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 51, 349 |
| BsmAI | GTCTC | 2 cut(s) | 368, 469 |
| BspACI | CCGC | 2 cut(s) | 343, 345 |
| BspCNI | CTCAG | 2 cut(s) | 40, 430 |
| BspFNI | CGCG | 1 cut(s) | 345 |
| BspLI | GGNNCC | 2 cut(s) | 56, 411 |
| BspMAI | CTGCAG | 1 cut(s) | 118 |
| BspT107I | GGYRCC | 1 cut(s) | 409 |
| BsrI | ACTGG | 2 cut(s) | 360, 382 |
| BssECI | CCNNGG | 1 cut(s) | 343 |
| Bst4CI | ACNGT | 1 cut(s) | 480 |
| Bst6I | CTCTTC | 1 cut(s) | 87 |
| BstC8I | GCNNGC | 1 cut(s) | 423 |
| BstDEI | CTNAG | 3 cut(s) | 27, 201, 438 |
| BstDSI | CCRYGG | 1 cut(s) | 343 |
| BstF5I | GGATG | 2 cut(s) | 41, 301 |
| BstFNI | CGCG | 1 cut(s) | 345 |
| BstHHI | GCGC | 1 cut(s) | 421 |
| BstMAI | GTCTC | 2 cut(s) | 368, 469 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 11, 110, 395, 427 |
| BstSFI | CTRYAG | 1 cut(s) | 114 |
| BstUI | CGCG | 1 cut(s) | 345 |
| BstV1I | GCAGC | 1 cut(s) | 100 |
| BstV2I | GAAGAC | 1 cut(s) | 345 |
| BtgI | CCRYGG | 1 cut(s) | 343 |
| BtsCI | GGATG | 2 cut(s) | 41, 301 |
| Cac8I | GCNNGC | 1 cut(s) | 423 |
| CaiI | CAGNNNCTG | 1 cut(s) | 122 |
| CfoI | GCGC | 1 cut(s) | 421 |
| Cfr42I | CCGCGG | 1 cut(s) | 346 |
| Csp6I | GTAC | 2 cut(s) | 353, 410 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 48, 83 |
| CviAII | CATG | 3 cut(s) | 229, 399, 426 |
| CviJI | RGCY | 7 cut(s) | 5, 104, 113, 197, 205, 217, 430 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 104, 113, 197, 205, 217, 430 |
| CviQI | GTAC | 2 cut(s) | 353, 410 |
| DdeI | CTNAG | 3 cut(s) | 27, 201, 438 |
| Eam1104I | CTCTTC | 1 cut(s) | 87 |
| EarI | CTCTTC | 1 cut(s) | 87 |
| FaeI | CATG | 3 cut(s) | 232, 402, 429 |
| FaiI | YATR | 8 cut(s) | 107, 230, 330, 336, 387, 400, 427, 471 |
| FatI | CATG | 3 cut(s) | 228, 398, 425 |
| FblI | GTMKAC | 1 cut(s) | 164 |
| Fnu4HI | GCNGC | 1 cut(s) | 114 |
| FokI | GGATG | 2 cut(s) | 28, 288 |
| Fsp4HI | GCNGC | 1 cut(s) | 114 |
| GlaI | GCGC | 1 cut(s) | 420 |
| GluI | GCNGC | 1 cut(s) | 114 |
| HhaI | GCGC | 1 cut(s) | 421 |
| Hin1II | CATG | 3 cut(s) | 232, 402, 429 |
| Hin6I | GCGC | 1 cut(s) | 419 |
| HinP1I | GCGC | 1 cut(s) | 419 |
| HinfI | GANTC | 1 cut(s) | 161 |
| HphI | GGTGA | 2 cut(s) | 359, 392 |
| Hpy166II | GTNNAC | 1 cut(s) | 165 |
| Hpy188I | TCNGA | 3 cut(s) | 30, 243, 457 |
| Hpy8I | GTNNAC | 1 cut(s) | 165 |
| HpyAV | CCTTC | 4 cut(s) | 46, 55, 192, 229 |
| HpyCH4III | ACNGT | 1 cut(s) | 480 |
| HpyCH4V | TGCA | 3 cut(s) | 14, 116, 389 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 11, 110, 395, 427 |
| HpyF3I | CTNAG | 3 cut(s) | 27, 201, 438 |
| Hsp92II | CATG | 3 cut(s) | 232, 402, 429 |
| HspAI | GCGC | 1 cut(s) | 419 |
| KpnI | GGTACC | 1 cut(s) | 413 |
| KspI | CCGCGG | 1 cut(s) | 346 |
| LpnPI | CCDG | 5 cut(s) | 135, 231, 341, 363, 435 |
| Lsp1109I | GCAGC | 1 cut(s) | 100 |
| LweI | GCATC | 2 cut(s) | 310, 432 |
| MboII | GAAGA | 4 cut(s) | 74, 84, 244, 350 |
| MluCI | AATT | 2 cut(s) | 283, 466 |
| MlyI | GAGTC | 1 cut(s) | 170 |
| MmeI | TCCRAC | 1 cut(s) | 458 |
| MnlI | CCTC | 5 cut(s) | 19, 90, 216, 243, 343 |
| MroXI | GAANNNNTTC | 1 cut(s) | 35 |
| MseI | TTAA | 3 cut(s) | 99, 273, 282 |
| MspA1I | CMGCKG | 1 cut(s) | 345 |
| MvnI | CGCG | 1 cut(s) | 345 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 11, 110, 395, 427 |
| NlaIII | CATG | 3 cut(s) | 232, 402, 429 |
| NlaIV | GGNNCC | 2 cut(s) | 56, 411 |
| PdmI | GAANNNNTTC | 1 cut(s) | 35 |
| PkrI | GCNGC | 1 cut(s) | 115 |
| PleI | GAGTC | 1 cut(s) | 169 |
| PpsI | GAGTC | 1 cut(s) | 169 |
| PspN4I | GGNNCC | 2 cut(s) | 56, 411 |
| PstI | CTGCAG | 1 cut(s) | 118 |
| PstNI | CAGNNNCTG | 1 cut(s) | 122 |
| RsaI | GTAC | 2 cut(s) | 354, 411 |
| RsaNI | GTAC | 2 cut(s) | 353, 410 |
| SacII | CCGCGG | 1 cut(s) | 346 |
| SaqAI | TTAA | 3 cut(s) | 99, 273, 282 |
| SatI | GCNGC | 1 cut(s) | 114 |
| SchI | GAGTC | 1 cut(s) | 170 |
| SetI | ASST | 9 cut(s) | 68, 106, 115, 124, 184, 199, 310, 354, 415 |
| SfaNI | GCATC | 2 cut(s) | 310, 432 |
| SfcI | CTRYAG | 1 cut(s) | 114 |
| Sfr303I | CCGCGG | 1 cut(s) | 346 |
| SgrBI | CCGCGG | 1 cut(s) | 346 |
| SmlI | CTYRAG | 1 cut(s) | 67 |
| SmoI | CTYRAG | 1 cut(s) | 67 |
| Sse9I | AATT | 2 cut(s) | 283, 466 |
| SsiI | CCGC | 2 cut(s) | 343, 345 |
| TaaI | ACNGT | 1 cut(s) | 480 |
| TaqII | GACCGA | 1 cut(s) | 146 |
| TasI | AATT | 2 cut(s) | 283, 466 |
| Tru1I | TTAA | 3 cut(s) | 99, 273, 282 |
| Tru9I | TTAA | 3 cut(s) | 99, 273, 282 |
| TseI | GCWGC | 1 cut(s) | 113 |
| TspDTI | ATGAA | 3 cut(s) | 74, 245, 351 |
| XmiI | GTMKAC | 1 cut(s) | 164 |
| XmnI | GAANNNNTTC | 1 cut(s) | 35 |