Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0012164

Physical Location & Seq

Genomic Coordinates Reverse (-)

23128616 .. 23132495

Gene Structure 3880 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0232000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2253 bp

ATGGCTTCCTCAGCGGCTCCTATTTCTGACAGCCTCAAGAAGATCTGGGATCAGTGGAATCTCCGGAGCTTCATCATGTTAAGTCTCACATTGCAGACCTTCTTAATTCTCTTTGCACCCTTGAGAAAGCGATCATCGAGCAAATGGGTAATAGTGCCCATCTGGTTGGCTTACTTGCTCGCTGACTGGGCTGCTAACTTCGCTATCGGACTAATTGCAAGCAGCCAAACGAACACTGATCAAGGTTCGCCAGAGAATGGTAATCTATTGGCATTCTGGGCTCCCTTTCTTCTTTTGCACCTTGGTGGTCCAGACACCATAATTGCAATTGCTATGGAAGACAATGCGTTGTGGCCAAGGCACTTGCTTGGTCTCATATTCCAGGTTGTAGCTGCAATGTACGTCTTCGGTATGCAGTTCTCTAACCAAAACAAGCTACTGTGGCCAACACTCTTCCTGTTTGTACCAGGACTTGTCAAGTACGGCGAGCGAACGCGTGCTTTATATCTTGCCAGCTTGGAAAGTCTCAAGGAAACCATACTTGCAGTACCGGAACCTGGACCGGATTATGCAAAGTACATGGATGAGTACTCCTCAAGAAAAGCTGCCCATCTTCCAATTAAAATAGAAATCAAAGAAGGTCGTAGCTCAGATTCGAAGAATGTGACGTATCGGCTGGGAGAAGGAGACGTCATTGATAATATTACACTAGTGGAGGGTGCTCATCACTTGTTTCAAATTTCCATGGGTCTTATTATAGATCTTGTGTTCGACTATCATCAGCGCAAAGAGAGCCGTGCCTATTTCATCAAATTAGAATCAGGAGATGCTTTTACATCAATTGCGACTGAGCTCAATTTTATGTATGAAGCTCTGTACACCAAAGTTTATGTGGTACATTCTCGACGGGGATACTTGTTGAGGGCTACATCCTTCATCGCAGTTTGCATAGCCTTTGTTTTCTTCTATAGATTAGAGAAACATGGCTTTCACAGGTTTGATGTTGGAATTACTTATTCCTTGCTTTTTGGTGCCATAGCTCTTGATTCAATAGCTCTTTCGATGCTGATATTATCTGATTGGACGATCGCTGTTGTATACAAGTTCTGTAAAAAGTGTTGTGTAGTCACTGATCTCATGATGAAGTACCTGGAGTTTAAGAGATCATGGCGACCAACTACTCCACCAAAGTGTCTGGAGTGGACCAGAAAGATTTTATTTCGAAGATGGTGTGAATCTGTCTCCGGTTTCAGCTTCATAGATTATTCTCTCCGAGAATGTGGAAGATCAGTAGTCCGACCTGTGTACCGTTTTGGCATTTTTGACCTTTACCGTACAGTCATCAGATTTTTGGGCTACCTTTACCATAGAATCATCATATTCCTGGGCCACCTTTACCTTAGAATCATTAAATTCTTTGGCCTCAAGTATCTTCGAGATGAGATGAAGTATAGATCCAGCAAGAGACTGGATGAGAATTTGTGGAAGTTCATTTTTGATGAGTTGAAAAGTAAATCCTCAAAAGTTGCTGATGATCCCAAAATTGGTAGAGAAATATGTTCGTCCCAAGGGGATTGGGTTCTCCTCAAAAAGTATGAGAAGCATCCGGAGTACAAGAACTTGCTAGCATGCTTTGTTGATGTTACTTATGACCGACGGGTTCTGCTGTGGCATATTGCTACTGAGATGTGTTATTACAGAGTTGATACAGGCAATGGTGGTGAGCATGGTGAATATAGTAAGACGTTGTCTGATTATTTGCTATATCTCTTAATTATGCAACCTGCTTTGATGTCCTCTGTAGCGGGAATTGGACAAAAGAGATTTAGAGATACGGTTGCAGAAGCCAAAAAATTCTATAAAAAAGGGCGAGTGGGATCCAATGTGAATCTAGGCGAGGCTTGTTACAAACTCCTTGATGTAGATACAGGAGTTAAACCTGTCAATGTCAAAGGGAATAGAAGTAAATCTGTTTTGTTTGATGCCTGTATTCTGGCCAAGCAGCTGATGAAATTCGAAGACTCAAAATGGGAATTAATAAGCTCGGTGTGGGTGGAATTGCTATCATATGCTGCCAGTCATTGCAGAGCACAAAGCCACGCGCAATTGCTGACTAAAGGTGGAGAGCTTGTCACTTTTGTTTGGTTACTGATGGCTCGCTTTGGCATTGAGGAGGACATCCAAGTACTGGAGGTCCAAGCAAGAGTAAAACTGATCATGGAAAAGCAACCTGATGTATTCCAGAGTAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009987 GO:0010257 GO:0010258 GO:0010598 GO:0016020 GO:0016043 GO:0022607 GO:0031976 GO:0031984 GO:0032991 GO:0034357 GO:0034622 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035 GO:0065003 GO:0071840 GO:0098796

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NdhO

Protein Analysis

750

Amino Acids

86.36

Weight (kDa)

9.13

Isoelectric Point (pI)

37.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF4220	PF13968	55 - 422	1.1e-90	Domain of unknown function (DUF4220)
DUF594	PF04578	673 - 723	7.5e-22	Protein of unknown function, DUF594

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012164)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74880
fragaria_vesca	FvH4_1g24330 FvH4_1g24330 FvH4_1g24330
malus_domestica	MD01G1003600.v1.1
prunus_persica	Prupe.6G157800_v2.0.a1
pyrus_communis	pycom01g02350
rosa_chinensis	RchiOBHm_Chr2g0120841
rosa_laevigata	RLG00000018594
rosa_multiflora	Rmu_sc0000621.1_g000009
rosa_roxburghii	Rroxscaffold_2G00122790
rosa_rugosa	Rorug02G0232000 Rorug02G0232000 Rorug02G0232100
rosa_samantha	Rh2AG288600 Rh2BG299600 Rh2CG277600 Rh2DG313700
rosa_wichuraiana	Rw2G023120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	693
Acc36I	ACCTGC	1 cut(s)	1792
AccB1I	GGYRCC	1 cut(s)	1031
AccB7I	CCANNNNNTGG	2 cut(s)	257, 2188
AccI	GTMKAC	1 cut(s)	1098
AccII	CGCG	2 cut(s)	496, 2102
AccIII	TCCGGA	2 cut(s)	63, 1606
AciI	CCGC	2 cut(s)	14, 1805
AclWI	GGATC	5 cut(s)	57, 1449, 1529, 1872, 1885
AcoI	YGGCCR	3 cut(s)	353, 443, 1995
AcsI	RAATTY	5 cut(s)	738, 1412, 1477, 1853, 2012
AcyI	GRCGYC	1 cut(s)	690
AfiI	CCNNNNNNNGG	4 cut(s)	257, 557, 1544, 2188
AflIII	ACRYGT	1 cut(s)	494
AgsI	TTSAA	3 cut(s)	737, 1050, 1507
AhlI	ACTAGT	1 cut(s)	709
AjnI	CCWGG	5 cut(s)	381, 466, 556, 1149, 1383
AleI	CACNNNNGTG	2 cut(s)	303, 1189
Alw21I	GWGCWC	3 cut(s)	724, 855, 2092
Alw26I	GTCTC	6 cut(s)	89, 377, 530, 681, 1246, 1459
AlwI	GGATC	5 cut(s)	57, 1449, 1529, 1872, 1885
Aor13HI	TCCGGA	2 cut(s)	63, 1606
AoxI	GGCC	5 cut(s)	353, 443, 1387, 1420, 1995
ApeKI	GCWGC	6 cut(s)	191, 222, 392, 605, 2002, 2072
ApoI	RAATTY	5 cut(s)	738, 1412, 1477, 1853, 2012
AseI	ATTAAT	1 cut(s)	2036
AspLEI	GCGC	2 cut(s)	786, 2104
AspS9I	GGNCC	5 cut(s)	308, 560, 1203, 1387, 2194
AsuHPI	GGTGA	2 cut(s)	1733, 1742
AsuII	TTCGAA	3 cut(s)	656, 1222, 2016
AsuNHI	GCTAGC	1 cut(s)	1624
AvaII	GGWCC	4 cut(s)	308, 560, 1203, 2194
BaeGI	GKGCMC	1 cut(s)	159
BaeI	ACNNNNGTAYC	4 cut(s)	1289, 1322, 1917, 1950
BalI	TGGCCA	3 cut(s)	355, 445, 1997
BamHI	GGATCC	1 cut(s)	1877
BanI	GGYRCC	1 cut(s)	1031
BanII	GRGCYC	2 cut(s)	283, 855
BbsI	GAAGAC	3 cut(s)	345, 397, 2025
Bbv12I	GWGCWC	3 cut(s)	724, 855, 2092
BbvCI	CCTCAGC	1 cut(s)	10
BbvI	GCAGC	6 cut(s)	178, 234, 379, 592, 2014, 2059
BccI	CCATC	4 cut(s)	167, 618, 1221, 2146
BceAI	ACGGC	2 cut(s)	499, 780
BciT130I	CCWGG	5 cut(s)	383, 468, 558, 1151, 1385
BciVI	GTATCC	1 cut(s)	905
BclI	TGATCA	2 cut(s)	238, 2214
BcoDI	GTCTC	6 cut(s)	89, 377, 530, 681, 1246, 1459
BcuI	ACTAGT	1 cut(s)	709
BfaI	CTAG	3 cut(s)	710, 1625, 1892
BfmI	CTRYAG	2 cut(s)	967, 1800
BfuAI	ACCTGC	1 cut(s)	1792
BfuI	GTATCC	1 cut(s)	905
BglII	AGATCT	2 cut(s)	42, 760
BisI	GCNGC	7 cut(s)	15, 192, 223, 393, 606, 2003, 2073
BlsI	GCNGC	7 cut(s)	16, 193, 224, 394, 607, 2004, 2074
BmcAI	AGTACT	2 cut(s)	590, 2187
Bme1390I	CCNGG	5 cut(s)	383, 468, 558, 1151, 1385
Bme18I	GGWCC	4 cut(s)	308, 560, 1203, 2194
BmgT120I	GGNCC	5 cut(s)	308, 560, 1203, 1387, 2194
BmiI	GGNNCC	5 cut(s)	18, 282, 555, 1033, 1879
BmrFI	CCNGG	5 cut(s)	383, 468, 558, 1151, 1385
BmrI	ACTGGG	1 cut(s)	196
BmsI	GCATC	4 cut(s)	817, 1053, 1612, 1972
BmtI	GCTAGC	1 cut(s)	1628
BmuI	ACTGGG	1 cut(s)	196
BpiI	GAAGAC	3 cut(s)	345, 397, 2025
BplI	GAGNNNNNCTC	2 cut(s)	578, 610
BpmI	CTGGAG	3 cut(s)	1172, 1217, 2210
Bpu10I	CCTNAGC	1 cut(s)	10
Bpu14I	TTCGAA	3 cut(s)	656, 1222, 2016
BpuEI	CTTGAG	5 cut(s)	20, 142, 512, 580, 1409
BsaHI	GRCGYC	1 cut(s)	690
BsaI	GGTCTC	1 cut(s)	377
BsaJI	CCNNGG	5 cut(s)	301, 356, 744, 1384, 1567
BsaWI	WCCGGW	5 cut(s)	63, 550, 562, 1244, 1606
BsaXI	ACNNNNNCTCC	2 cut(s)	2115, 2145
Bsc4I	CCNNNNNNNGG	4 cut(s)	257, 557, 1544, 2188
Bse1I	ACTGG	4 cut(s)	191, 1473, 2076, 2193
Bse3DI	GCAATG	4 cut(s)	89, 402, 1720, 2080
BseAI	TCCGGA	2 cut(s)	63, 1606
BseBI	CCWGG	5 cut(s)	383, 468, 558, 1151, 1385
BseDI	CCNNGG	5 cut(s)	301, 356, 744, 1384, 1567
BseGI	GGATG	5 cut(s)	589, 929, 1477, 1603, 2178
BseLI	CCNNNNNNNGG	4 cut(s)	257, 557, 1544, 2188
BseMI	GCAATG	4 cut(s)	89, 402, 1720, 2080
BseMII	CTCAG	4 cut(s)	24, 663, 840, 1674
BseNI	ACTGG	4 cut(s)	191, 1473, 2076, 2193
BseRI	GAGGAG	3 cut(s)	583, 1574, 2186
BseSI	GKGCMC	1 cut(s)	159
BseXI	GCAGC	6 cut(s)	178, 234, 379, 592, 2014, 2059
BseYI	CCCAGC	1 cut(s)	676
Bsh1236I	CGCG	2 cut(s)	496, 2102
Bsh1285I	CGRYCG	1 cut(s)	1089
BshFI	GGCC	5 cut(s)	355, 445, 1389, 1422, 1997
BshNI	GGYRCC	1 cut(s)	1031
BsiEI	CGRYCG	1 cut(s)	1089
BsiHKAI	GWGCWC	3 cut(s)	724, 855, 2092
BsiSI	CCGG	5 cut(s)	64, 551, 563, 1245, 1607
BslFI	GGGAC	1 cut(s)	1549
BslI	CCNNNNNNNGG	4 cut(s)	257, 557, 1544, 2188
BsmAI	GTCTC	6 cut(s)	89, 377, 530, 681, 1246, 1459
BsmBI	CGTCTC	1 cut(s)	681
BsmFI	GGGAC	1 cut(s)	1549
BsmI	GAATGC	1 cut(s)	272
BsnI	GGCC	5 cut(s)	355, 445, 1389, 1422, 1997
Bso31I	GGTCTC	1 cut(s)	377
Bsp119I	TTCGAA	3 cut(s)	656, 1222, 2016
Bsp1286I	GDGCHC	5 cut(s)	159, 283, 724, 855, 2092
Bsp13I	TCCGGA	2 cut(s)	63, 1606
Bsp1407I	TGTACA	1 cut(s)	876
Bsp19I	CCATGG	1 cut(s)	744
BspACI	CCGC	2 cut(s)	14, 1805
BspANI	GGCC	5 cut(s)	355, 445, 1389, 1422, 1997
BspCNI	CTCAG	4 cut(s)	23, 662, 841, 1675
BspEI	TCCGGA	2 cut(s)	63, 1606
BspFNI	CGCG	2 cut(s)	496, 2102
BspHI	TCATGA	1 cut(s)	1137
BspLI	GGNNCC	5 cut(s)	18, 282, 555, 1033, 1879
BspMI	ACCTGC	1 cut(s)	1792
BspOI	GCTAGC	1 cut(s)	1628
BspPI	GGATC	5 cut(s)	57, 1449, 1529, 1872, 1885
BspT104I	TTCGAA	3 cut(s)	656, 1222, 2016
BspT107I	GGYRCC	1 cut(s)	1031
BspTNI	GGTCTC	1 cut(s)	377
BsrDI	GCAATG	4 cut(s)	89, 402, 1720, 2080
BsrGI	TGTACA	1 cut(s)	876
BsrI	ACTGG	4 cut(s)	191, 1473, 2076, 2193
BssECI	CCNNGG	5 cut(s)	301, 356, 744, 1384, 1567
BssNAI	GTATAC	1 cut(s)	1099
BssNI	GRCGYC	1 cut(s)	690
BssT1I	CCWWGG	4 cut(s)	301, 356, 744, 1567
Bst1107I	GTATAC	1 cut(s)	1099
Bst2UI	CCWGG	5 cut(s)	383, 468, 558, 1151, 1385
Bst4CI	ACNGT	5 cut(s)	441, 1310, 1334, 1339, 1837
Bst6I	CTCTTC	1 cut(s)	458
BstACI	GRCGYC	1 cut(s)	690
BstAUI	TGTACA	1 cut(s)	876
BstBI	TTCGAA	3 cut(s)	656, 1222, 2016
BstC8I	GCNNGC	8 cut(s)	180, 220, 488, 498, 514, 1626, 1630, 2158
BstDEI	CTNAG	5 cut(s)	10, 649, 849, 1400, 1683
BstDSI	CCRYGG	1 cut(s)	744
BstF5I	GGATG	5 cut(s)	589, 929, 1477, 1603, 2178
BstFNI	CGCG	2 cut(s)	496, 2102
BstHHI	GCGC	2 cut(s)	786, 2104
BstMAI	GTCTC	6 cut(s)	89, 377, 530, 681, 1246, 1459
BstMCI	CGRYCG	1 cut(s)	1089
BstMWI	GCNNNNNNNGC	6 cut(s)	11, 188, 200, 278, 442, 792
BstNI	CCWGG	5 cut(s)	383, 468, 558, 1151, 1385
BstNSI	RCATGY	1 cut(s)	1632
BstSCI	CCNGG	5 cut(s)	381, 466, 556, 1149, 1383
BstSFI	CTRYAG	2 cut(s)	967, 1800
BstSLI	GKGCMC	1 cut(s)	159
BstUI	CGCG	2 cut(s)	496, 2102
BstV1I	GCAGC	6 cut(s)	178, 234, 379, 592, 2014, 2059
BstV2I	GAAGAC	3 cut(s)	345, 397, 2025
BstX2I	RGATCY	4 cut(s)	42, 760, 1454, 1877
BstXI	CCANNNNNNTGG	1 cut(s)	166
BstYI	RGATCY	4 cut(s)	42, 760, 1454, 1877
BstZ17I	GTATAC	1 cut(s)	1099
BsuI	GTATCC	1 cut(s)	905
BsuRI	GGCC	5 cut(s)	355, 445, 1389, 1422, 1997
BtgI	CCRYGG	1 cut(s)	744
BtgZI	GCGATG	1 cut(s)	922
BtsCI	GGATG	5 cut(s)	589, 929, 1477, 1603, 2178
BtsIMutI	CAGTG	3 cut(s)	59, 234, 1128
BveI	ACCTGC	1 cut(s)	1792
Cac8I	GCNNGC	8 cut(s)	180, 220, 488, 498, 514, 1626, 1630, 2158
CciI	TCATGA	1 cut(s)	1137
CfoI	GCGC	2 cut(s)	786, 2104
Cfr13I	GGNCC	5 cut(s)	308, 560, 1203, 1387, 2194
CviAII	CATG	9 cut(s)	76, 580, 745, 983, 1138, 1167, 1629, 1727, 2218
DdeI	CTNAG	5 cut(s)	10, 649, 849, 1400, 1683
EaeI	YGGCCR	3 cut(s)	353, 443, 1995
Eam1104I	CTCTTC	1 cut(s)	458
EarI	CTCTTC	1 cut(s)	458
Ecl136II	GAGCTC	1 cut(s)	853
Eco130I	CCWWGG	4 cut(s)	301, 356, 744, 1567
Eco24I	GRGCYC	2 cut(s)	283, 855
Eco31I	GGTCTC	1 cut(s)	377
Eco47I	GGWCC	4 cut(s)	308, 560, 1203, 2194
Eco53kI	GAGCTC	1 cut(s)	853
EcoICRI	GAGCTC	1 cut(s)	853
EcoRII	CCWGG	5 cut(s)	381, 466, 556, 1149, 1383
EcoT14I	CCWWGG	4 cut(s)	301, 356, 744, 1567
EcoT38I	GRGCYC	2 cut(s)	283, 855
ErhI	CCWWGG	4 cut(s)	301, 356, 744, 1567
Esp3I	CGTCTC	1 cut(s)	681
FaeI	CATG	9 cut(s)	79, 583, 748, 986, 1141, 1170, 1632, 1730, 2221
FaqI	GGGAC	1 cut(s)	1549
FatI	CATG	9 cut(s)	75, 579, 744, 982, 1137, 1166, 1628, 1726, 2217
FauI	CCCGC	1 cut(s)	1798
FauNDI	CATATG	1 cut(s)	2068
FbaI	TGATCA	2 cut(s)	238, 2214
FblI	GTMKAC	1 cut(s)	1098
Fnu4HI	GCNGC	7 cut(s)	15, 192, 223, 393, 606, 2003, 2073
FokI	GGATG	5 cut(s)	596, 916, 1484, 1590, 2165
FriOI	GRGCYC	2 cut(s)	283, 855
Fsp4HI	GCNGC	7 cut(s)	15, 192, 223, 393, 606, 2003, 2073
FspBI	CTAG	3 cut(s)	710, 1625, 1892
GlaI	GCGC	2 cut(s)	785, 2103
GluI	GCNGC	7 cut(s)	15, 192, 223, 393, 606, 2003, 2073
GsaI	CCCAGC	1 cut(s)	680
GsuI	CTGGAG	3 cut(s)	1172, 1217, 2210
HaeIII	GGCC	5 cut(s)	355, 445, 1389, 1422, 1997
HapII	CCGG	5 cut(s)	64, 551, 563, 1245, 1607
HhaI	GCGC	2 cut(s)	786, 2104
Hin1I	GRCGYC	1 cut(s)	690
Hin1II	CATG	9 cut(s)	79, 583, 748, 986, 1141, 1170, 1632, 1730, 2221
Hin6I	GCGC	2 cut(s)	784, 2102
HinP1I	GCGC	2 cut(s)	784, 2102
HinfI	GANTC	9 cut(s)	58, 653, 818, 1046, 1235, 1371, 1404, 1888, 2021
HpaII	CCGG	5 cut(s)	64, 551, 563, 1245, 1607
HphI	GGTGA	2 cut(s)	1733, 1742
Hpy166II	GTNNAC	4 cut(s)	879, 1099, 1203, 1306
Hpy188I	TCNGA	8 cut(s)	28, 209, 652, 1078, 1274, 1298, 1346, 1753
Hpy8I	GTNNAC	4 cut(s)	879, 1099, 1203, 1306
Hpy99I	CGWCG	2 cut(s)	909, 1659
HpyAV	CCTTC	4 cut(s)	109, 632, 677, 943
HpyCH4III	ACNGT	5 cut(s)	441, 1310, 1334, 1339, 1837
HpyCH4IV	ACGT	4 cut(s)	402, 668, 690, 1745
HpyF10VI	GCNNNNNNNGC	6 cut(s)	11, 188, 200, 278, 442, 792
HpyF3I	CTNAG	5 cut(s)	10, 649, 849, 1400, 1683
HpySE526I	ACGT	4 cut(s)	402, 668, 690, 1745
Hsp92I	GRCGYC	1 cut(s)	690
Hsp92II	CATG	9 cut(s)	79, 583, 748, 986, 1141, 1170, 1632, 1730, 2221
HspAI	GCGC	2 cut(s)	784, 2102
Kpn2I	TCCGGA	2 cut(s)	63, 1606
Ksp22I	TGATCA	2 cut(s)	238, 2214
LmnI	GCTCC	3 cut(s)	22, 66, 286
Lsp1109I	GCAGC	6 cut(s)	178, 234, 379, 592, 2014, 2059
LweI	GCATC	4 cut(s)	817, 1053, 1612, 1972
MaeI	CTAG	3 cut(s)	710, 1625, 1892
MaeII	ACGT	4 cut(s)	402, 668, 690, 1745
MaeIII	GTNAC	6 cut(s)	664, 1126, 1642, 1904, 2131, 2145
MfeI	CAATTG	3 cut(s)	327, 840, 2105
MflI	RGATCY	4 cut(s)	42, 760, 1454, 1877
MhlI	GDGCHC	5 cut(s)	159, 283, 724, 855, 2092
MlsI	TGGCCA	3 cut(s)	355, 445, 1997
MluI	ACGCGT	1 cut(s)	494
MluNI	TGGCCA	3 cut(s)	355, 445, 1997
MlyI	GAGTC	1 cut(s)	2015
MmeI	TCCRAC	2 cut(s)	985, 1321
Mox20I	TGGCCA	3 cut(s)	355, 445, 1997
MroI	TCCGGA	2 cut(s)	63, 1606
MscI	TGGCCA	3 cut(s)	355, 445, 1997
MseI	TTAA	8 cut(s)	80, 104, 621, 1158, 1410, 1772, 1935, 2036
MslI	CAYNNNNRTG	2 cut(s)	303, 1189
Msp20I	TGGCCA	3 cut(s)	355, 445, 1997
MspA1I	CMGCKG	2 cut(s)	14, 2005
MspI	CCGG	5 cut(s)	64, 551, 563, 1245, 1607
MspR9I	CCNGG	5 cut(s)	383, 468, 558, 1151, 1385
MunI	CAATTG	3 cut(s)	327, 840, 2105
Mva1269I	GAATGC	1 cut(s)	272
MvaI	CCWGG	5 cut(s)	383, 468, 558, 1151, 1385
MvnI	CGCG	2 cut(s)	496, 2102
MwoI	GCNNNNNNNGC	6 cut(s)	11, 188, 200, 278, 442, 792
NcoI	CCATGG	1 cut(s)	744
NdeI	CATATG	1 cut(s)	2068
NheI	GCTAGC	1 cut(s)	1624
NlaIII	CATG	9 cut(s)	79, 583, 748, 986, 1141, 1170, 1632, 1730, 2221
NlaIV	GGNNCC	5 cut(s)	18, 282, 555, 1033, 1879
NmuCI	GTSAC	3 cut(s)	664, 1126, 2131
NspI	RCATGY	1 cut(s)	1632
NspV	TTCGAA	3 cut(s)	656, 1222, 2016
OliI	CACNNNNGTG	2 cut(s)	303, 1189
PaeI	GCATGC	1 cut(s)	1632
PagI	TCATGA	1 cut(s)	1137
PctI	GAATGC	1 cut(s)	272
PfeI	GAWTC	8 cut(s)	58, 653, 818, 1046, 1235, 1371, 1404, 1888
PflFI	GACNNNGTC	1 cut(s)	1747
PflMI	CCANNNNNTGG	2 cut(s)	257, 2188
PkrI	GCNGC	7 cut(s)	16, 193, 224, 394, 607, 2004, 2074
Ple19I	CGATCG	1 cut(s)	1089
PleI	GAGTC	1 cut(s)	2015
PpsI	GAGTC	1 cut(s)	2015
PshBI	ATTAAT	1 cut(s)	2036
Psp124BI	GAGCTC	1 cut(s)	855
Psp6I	CCWGG	5 cut(s)	381, 466, 556, 1149, 1383
PspFI	CCCAGC	1 cut(s)	676
PspGI	CCWGG	5 cut(s)	381, 466, 556, 1149, 1383
PspN4I	GGNNCC	5 cut(s)	18, 282, 555, 1033, 1879
PspPI	GGNCC	5 cut(s)	308, 560, 1203, 1387, 2194
PsuI	RGATCY	4 cut(s)	42, 760, 1454, 1877
PsyI	GACNNNGTC	1 cut(s)	1747
PvuI	CGATCG	1 cut(s)	1089
PvuII	CAGCTG	1 cut(s)	2005
RseI	CAYNNNNRTG	2 cut(s)	303, 1189
SacI	GAGCTC	1 cut(s)	855
SaqAI	TTAA	8 cut(s)	80, 104, 621, 1158, 1410, 1772, 1935, 2036
SatI	GCNGC	7 cut(s)	15, 192, 223, 393, 606, 2003, 2073
Sau96I	GGNCC	5 cut(s)	308, 560, 1203, 1387, 2194
ScaI	AGTACT	2 cut(s)	590, 2187
SchI	GAGTC	1 cut(s)	2015
ScrFI	CCNGG	5 cut(s)	383, 468, 558, 1151, 1385
SduI	GDGCHC	5 cut(s)	159, 283, 724, 855, 2092
SfaNI	GCATC	4 cut(s)	817, 1053, 1612, 1972
SfcI	CTRYAG	2 cut(s)	967, 1800
SfuI	TTCGAA	3 cut(s)	656, 1222, 2016
SinI	GGWCC	4 cut(s)	308, 560, 1203, 2194
SmiMI	CAYNNNNRTG	2 cut(s)	303, 1189
SmlI	CTYRAG	5 cut(s)	35, 121, 527, 595, 1424
SmoI	CTYRAG	5 cut(s)	35, 121, 527, 595, 1424
SpeI	ACTAGT	1 cut(s)	709
SphI	GCATGC	1 cut(s)	1632
SsiI	CCGC	2 cut(s)	14, 1805
SspI	AATATT	1 cut(s)	703
SspMI	CTAG	3 cut(s)	710, 1625, 1892
SstI	GAGCTC	1 cut(s)	855
StyD4I	CCNGG	5 cut(s)	381, 466, 556, 1149, 1383
StyI	CCWWGG	4 cut(s)	301, 356, 744, 1567
TaaI	ACNGT	5 cut(s)	441, 1310, 1334, 1339, 1837
TaiI	ACGT	4 cut(s)	405, 671, 693, 1748
TaqI	TCGA	8 cut(s)	137, 656, 771, 904, 1061, 1222, 1435, 2016
TaqII	GACCGA	1 cut(s)	1668
TatI	WGTACW	5 cut(s)	576, 588, 876, 1611, 2185
TauI	GCSGC	1 cut(s)	17
TfiI	GAWTC	8 cut(s)	58, 653, 818, 1046, 1235, 1371, 1404, 1888
Tru1I	TTAA	8 cut(s)	80, 104, 621, 1158, 1410, 1772, 1935, 2036
Tru9I	TTAA	8 cut(s)	80, 104, 621, 1158, 1410, 1772, 1935, 2036
TscAI	CASTG	3 cut(s)	59, 241, 1135
TseFI	GTSAC	3 cut(s)	664, 1126, 2131
TseI	GCWGC	6 cut(s)	191, 222, 392, 605, 2002, 2072
Tsp45I	GTSAC	3 cut(s)	664, 1126, 2131
TspDTI	ATGAA	9 cut(s)	61, 796, 882, 925, 1157, 1246, 1460, 1480, 2024
TspRI	CASTG	3 cut(s)	59, 241, 1135
Tth111I	GACNNNGTC	1 cut(s)	1747
Van91I	CCANNNNNTGG	2 cut(s)	257, 2188
VpaK11BI	GGWCC	4 cut(s)	308, 560, 1203, 2194
VspI	ATTAAT	1 cut(s)	2036
XapI	RAATTY	5 cut(s)	738, 1412, 1477, 1853, 2012
XceI	RCATGY	1 cut(s)	1632
XcmI	CCANNNNNNNNNTGG	2 cut(s)	889, 1465
XmiI	GTMKAC	1 cut(s)	1098
XspI	CTAG	3 cut(s)	710, 1625, 1892
ZraI	GACGTC	1 cut(s)	691
ZrmI	AGTACT	2 cut(s)	590, 2187

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.