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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G39470 |
| fragaria_vesca | FvH4_1g22920 FvH4_1g22920 |
| malus_domestica | MD15G1331000.v1.1 |
| prunus_persica | Prupe.6G169000_v2.0.a1 Prupe.6G169000_v2.0.a1 |
| pyrus_communis | pycom15g29420 pycom15g29430 |
| rosa_chinensis | RchiOBHm_Chr2g0117361 |
| rosa_laevigata | RLG00000018345 |
| rosa_multiflora | Rmu_sc0004436.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00126540 |
| rosa_rugosa | Rorug02G0212400 Rorug02G0212400 |
| rosa_samantha | Rh2AG267500 Rh2BG279900 Rh2DG274600 Rh2DG293900 |
| rosa_wichuraiana | Rw2G021180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 4 cut(s) | 128, 184, 778, 890 |
| AclWI | GGATC | 3 cut(s) | 887, 900, 954 |
| AcsI | RAATTY | 6 cut(s) | 57, 146, 268, 813, 869, 1004 |
| AcuI | CTGAAG | 1 cut(s) | 1020 |
| AfaI | GTAC | 1 cut(s) | 634 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 420, 1016 |
| AgsI | TTSAA | 8 cut(s) | 29, 122, 145, 340, 490, 865, 875, 977 |
| AjnI | CCWGG | 1 cut(s) | 921 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 833, 865 |
| AluBI | AGCT | 5 cut(s) | 353, 689, 737, 962, 989 |
| AluI | AGCT | 5 cut(s) | 353, 689, 737, 962, 989 |
| Alw21I | GWGCWC | 1 cut(s) | 991 |
| Alw26I | GTCTC | 1 cut(s) | 404 |
| AlwI | GGATC | 3 cut(s) | 887, 900, 954 |
| Ama87I | CYCGRG | 1 cut(s) | 897 |
| AoxI | GGCC | 1 cut(s) | 671 |
| ApeKI | GCWGC | 5 cut(s) | 14, 78, 350, 962, 1043 |
| ApoI | RAATTY | 6 cut(s) | 57, 146, 268, 813, 869, 1004 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1005 |
| AspLEI | GCGC | 1 cut(s) | 604 |
| AspS9I | GGNCC | 2 cut(s) | 466, 731 |
| AsuHPI | GGTGA | 1 cut(s) | 205 |
| AvaI | CYCGRG | 1 cut(s) | 897 |
| AvaII | GGWCC | 2 cut(s) | 466, 731 |
| BamHI | GGATCC | 1 cut(s) | 892 |
| BanII | GRGCYC | 1 cut(s) | 991 |
| BbsI | GAAGAC | 1 cut(s) | 932 |
| Bbv12I | GWGCWC | 1 cut(s) | 991 |
| BbvI | GCAGC | 4 cut(s) | 65, 362, 949, 1055 |
| BccI | CCATC | 1 cut(s) | 592 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1067, 1101 |
| BciT130I | CCWGG | 1 cut(s) | 923 |
| BcoDI | GTCTC | 1 cut(s) | 404 |
| BfmI | CTRYAG | 2 cut(s) | 934, 963 |
| BfoI | RGCGCY | 1 cut(s) | 605 |
| BisI | GCNGC | 6 cut(s) | 15, 79, 128, 351, 963, 1044 |
| BlsI | GCNGC | 6 cut(s) | 16, 80, 129, 352, 964, 1045 |
| BmcAI | AGTACT | 1 cut(s) | 634 |
| Bme1390I | CCNGG | 1 cut(s) | 923 |
| Bme18I | GGWCC | 2 cut(s) | 466, 731 |
| BmeT110I | CYCGRG | 1 cut(s) | 897 |
| BmgT120I | GGNCC | 2 cut(s) | 466, 731 |
| BmiI | GGNNCC | 3 cut(s) | 468, 570, 894 |
| BmrFI | CCNGG | 1 cut(s) | 923 |
| BmsI | GCATC | 4 cut(s) | 323, 738, 819, 1075 |
| BpiI | GAAGAC | 1 cut(s) | 932 |
| BsaI | GGTCTC | 1 cut(s) | 404 |
| BsaJI | CCNNGG | 1 cut(s) | 922 |
| BsaWI | WCCGGW | 1 cut(s) | 1101 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 420, 1016 |
| Bse1I | ACTGG | 1 cut(s) | 384 |
| Bse3DI | GCAATG | 1 cut(s) | 516 |
| BseBI | CCWGG | 1 cut(s) | 923 |
| BseDI | CCNNGG | 1 cut(s) | 922 |
| BseGI | GGATG | 2 cut(s) | 338, 439 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 420, 1016 |
| BseMI | GCAATG | 1 cut(s) | 516 |
| BseMII | CTCAG | 3 cut(s) | 620, 697, 1080 |
| BseNI | ACTGG | 1 cut(s) | 384 |
| BseRI | GAGGAG | 6 cut(s) | 184, 413, 476, 529, 680, 812 |
| BseXI | GCAGC | 4 cut(s) | 65, 362, 949, 1055 |
| BshFI | GGCC | 1 cut(s) | 673 |
| BsiHKAI | GWGCWC | 1 cut(s) | 991 |
| BsiHKCI | CYCGRG | 1 cut(s) | 897 |
| BsiSI | CCGG | 1 cut(s) | 1102 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 420, 1016 |
| BsmAI | GTCTC | 1 cut(s) | 404 |
| BsnI | GGCC | 1 cut(s) | 673 |
| Bso31I | GGTCTC | 1 cut(s) | 404 |
| BsoBI | CYCGRG | 1 cut(s) | 897 |
| Bsp1286I | GDGCHC | 1 cut(s) | 991 |
| Bsp143I | GATC | 3 cut(s) | 615, 892, 946 |
| BspACI | CCGC | 4 cut(s) | 128, 184, 778, 890 |
| BspANI | GGCC | 1 cut(s) | 673 |
| BspCNI | CTCAG | 3 cut(s) | 621, 696, 1081 |
| BspHI | TCATGA | 1 cut(s) | 724 |
| BspLI | GGNNCC | 3 cut(s) | 468, 570, 894 |
| BspMAI | CTGCAG | 1 cut(s) | 967 |
| BspPI | GGATC | 3 cut(s) | 887, 900, 954 |
| BspTNI | GGTCTC | 1 cut(s) | 404 |
| BsrDI | GCAATG | 1 cut(s) | 516 |
| BsrI | ACTGG | 1 cut(s) | 384 |
| BssECI | CCNNGG | 1 cut(s) | 922 |
| BssMI | GATC | 3 cut(s) | 615, 892, 946 |
| Bst2UI | CCWGG | 1 cut(s) | 923 |
| Bst4CI | ACNGT | 3 cut(s) | 938, 972, 1068 |
| Bst6I | CTCTTC | 2 cut(s) | 30, 398 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 356, 365 |
| BstC8I | GCNNGC | 1 cut(s) | 366 |
| BstDEI | CTNAG | 3 cut(s) | 629, 683, 1089 |
| BstF5I | GGATG | 2 cut(s) | 338, 439 |
| BstH2I | RGCGCY | 1 cut(s) | 605 |
| BstHHI | GCGC | 1 cut(s) | 604 |
| BstKTI | GATC | 3 cut(s) | 618, 895, 949 |
| BstMAI | GTCTC | 1 cut(s) | 404 |
| BstMBI | GATC | 3 cut(s) | 615, 892, 946 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 356, 365, 679 |
| BstNI | CCWGG | 1 cut(s) | 923 |
| BstNSI | RCATGY | 1 cut(s) | 836 |
| BstSCI | CCNGG | 1 cut(s) | 921 |
| BstSFI | CTRYAG | 2 cut(s) | 934, 963 |
| BstV1I | GCAGC | 4 cut(s) | 65, 362, 949, 1055 |
| BstV2I | GAAGAC | 1 cut(s) | 932 |
| BstX2I | RGATCY | 1 cut(s) | 892 |
| BstYI | RGATCY | 1 cut(s) | 892 |
| BsuRI | GGCC | 1 cut(s) | 673 |
| BtsCI | GGATG | 2 cut(s) | 338, 439 |
| BtsI | GCAGTG | 1 cut(s) | 359 |
| BtsIMutI | CAGTG | 2 cut(s) | 359, 391 |
| Cac8I | GCNNGC | 1 cut(s) | 366 |
| CciI | TCATGA | 1 cut(s) | 724 |
| CfoI | GCGC | 1 cut(s) | 604 |
| Cfr13I | GGNCC | 2 cut(s) | 466, 731 |
| Csp6I | GTAC | 1 cut(s) | 633 |
| CviAII | CATG | 4 cut(s) | 619, 695, 725, 833 |
| CviQI | GTAC | 1 cut(s) | 633 |
| DdeI | CTNAG | 3 cut(s) | 629, 683, 1089 |
| DpnI | GATC | 3 cut(s) | 617, 894, 948 |
| DpnII | GATC | 3 cut(s) | 615, 892, 946 |
| Eam1104I | CTCTTC | 2 cut(s) | 30, 398 |
| EarI | CTCTTC | 2 cut(s) | 30, 398 |
| Ecl136II | GAGCTC | 1 cut(s) | 989 |
| Eco147I | AGGCCT | 1 cut(s) | 673 |
| Eco24I | GRGCYC | 1 cut(s) | 991 |
| Eco31I | GGTCTC | 1 cut(s) | 404 |
| Eco47I | GGWCC | 2 cut(s) | 466, 731 |
| Eco53kI | GAGCTC | 1 cut(s) | 989 |
| Eco57I | CTGAAG | 1 cut(s) | 1020 |
| Eco88I | CYCGRG | 1 cut(s) | 897 |
| EcoICRI | GAGCTC | 1 cut(s) | 989 |
| EcoO109I | RGGNCCY | 1 cut(s) | 466 |
| EcoRI | GAATTC | 1 cut(s) | 813 |
| EcoRII | CCWGG | 1 cut(s) | 921 |
| EcoT22I | ATGCAT | 1 cut(s) | 834 |
| EcoT38I | GRGCYC | 1 cut(s) | 991 |
| FaeI | CATG | 4 cut(s) | 622, 698, 728, 836 |
| FatI | CATG | 4 cut(s) | 618, 694, 724, 832 |
| FauI | CCCGC | 1 cut(s) | 771 |
| Fnu4HI | GCNGC | 6 cut(s) | 15, 79, 128, 351, 963, 1044 |
| FokI | GGATG | 2 cut(s) | 345, 446 |
| FriOI | GRGCYC | 1 cut(s) | 991 |
| Fsp4HI | GCNGC | 6 cut(s) | 15, 79, 128, 351, 963, 1044 |
| GlaI | GCGC | 1 cut(s) | 603 |
| GluI | GCNGC | 6 cut(s) | 15, 79, 128, 351, 963, 1044 |
| HaeII | RGCGCY | 1 cut(s) | 605 |
| HaeIII | GGCC | 1 cut(s) | 673 |
| HapII | CCGG | 1 cut(s) | 1102 |
| HhaI | GCGC | 1 cut(s) | 604 |
| Hin1II | CATG | 4 cut(s) | 622, 698, 728, 836 |
| Hin6I | GCGC | 1 cut(s) | 602 |
| HinP1I | GCGC | 1 cut(s) | 602 |
| HinfI | GANTC | 2 cut(s) | 189, 789 |
| HpaII | CCGG | 1 cut(s) | 1102 |
| HphI | GGTGA | 1 cut(s) | 205 |
| Hpy166II | GTNNAC | 2 cut(s) | 230, 1064 |
| Hpy188I | TCNGA | 3 cut(s) | 686, 819, 1074 |
| Hpy188III | TCNNGA | 7 cut(s) | 276, 653, 725, 875, 899, 944, 1025 |
| Hpy8I | GTNNAC | 2 cut(s) | 230, 1064 |
| HpyAV | CCTTC | 6 cut(s) | 232, 484, 722, 835, 851, 949 |
| HpyCH4III | ACNGT | 3 cut(s) | 938, 972, 1068 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 356, 365, 679 |
| HpyF3I | CTNAG | 3 cut(s) | 629, 683, 1089 |
| Hsp92II | CATG | 4 cut(s) | 622, 698, 728, 836 |
| HspAI | GCGC | 1 cut(s) | 602 |
| Kzo9I | GATC | 3 cut(s) | 615, 892, 946 |
| LmnI | GCTCC | 1 cut(s) | 568 |
| Lsp1109I | GCAGC | 4 cut(s) | 65, 362, 949, 1055 |
| LweI | GCATC | 4 cut(s) | 323, 738, 819, 1075 |
| MalI | GATC | 3 cut(s) | 617, 894, 948 |
| MboI | GATC | 3 cut(s) | 615, 892, 946 |
| MboII | GAAGA | 6 cut(s) | 17, 415, 463, 866, 932, 1013 |
| MflI | RGATCY | 1 cut(s) | 892 |
| MhlI | GDGCHC | 1 cut(s) | 991 |
| MlyI | GAGTC | 2 cut(s) | 183, 798 |
| MmeI | TCCRAC | 2 cut(s) | 280, 310 |
| Mph1103I | ATGCAT | 1 cut(s) | 834 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1005 |
| MseI | TTAA | 1 cut(s) | 753 |
| MspA1I | CMGCKG | 3 cut(s) | 353, 737, 778 |
| MspI | CCGG | 1 cut(s) | 1102 |
| MspR9I | CCNGG | 1 cut(s) | 923 |
| MvaI | CCWGG | 1 cut(s) | 923 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 356, 365, 679 |
| NdeII | GATC | 3 cut(s) | 615, 892, 946 |
| NlaIII | CATG | 4 cut(s) | 622, 698, 728, 836 |
| NlaIV | GGNNCC | 3 cut(s) | 468, 570, 894 |
| NsiI | ATGCAT | 1 cut(s) | 834 |
| NspI | RCATGY | 1 cut(s) | 836 |
| PaeR7I | CTCGAG | 1 cut(s) | 897 |
| PagI | TCATGA | 1 cut(s) | 724 |
| PceI | AGGCCT | 1 cut(s) | 673 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 904 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1005 |
| PkrI | GCNGC | 6 cut(s) | 16, 80, 129, 352, 964, 1045 |
| PleI | GAGTC | 2 cut(s) | 183, 797 |
| PpsI | GAGTC | 2 cut(s) | 183, 797 |
| PpuMI | RGGWCCY | 1 cut(s) | 466 |
| Psp124BI | GAGCTC | 1 cut(s) | 991 |
| Psp5II | RGGWCCY | 1 cut(s) | 466 |
| Psp6I | CCWGG | 1 cut(s) | 921 |
| PspGI | CCWGG | 1 cut(s) | 921 |
| PspN4I | GGNNCC | 3 cut(s) | 468, 570, 894 |
| PspPI | GGNCC | 2 cut(s) | 466, 731 |
| PspPPI | RGGWCCY | 1 cut(s) | 466 |
| PstI | CTGCAG | 1 cut(s) | 967 |
| PsuI | RGATCY | 1 cut(s) | 892 |
| PvuII | CAGCTG | 2 cut(s) | 353, 737 |
| RsaI | GTAC | 1 cut(s) | 634 |
| RsaNI | GTAC | 1 cut(s) | 633 |
| SacI | GAGCTC | 1 cut(s) | 991 |
| SaqAI | TTAA | 1 cut(s) | 753 |
| SatI | GCNGC | 6 cut(s) | 15, 79, 128, 351, 963, 1044 |
| Sau3AI | GATC | 3 cut(s) | 615, 892, 946 |
| Sau96I | GGNCC | 2 cut(s) | 466, 731 |
| ScaI | AGTACT | 1 cut(s) | 634 |
| SchI | GAGTC | 2 cut(s) | 183, 798 |
| ScrFI | CCNGG | 1 cut(s) | 923 |
| SduI | GDGCHC | 1 cut(s) | 991 |
| SfaNI | GCATC | 4 cut(s) | 323, 738, 819, 1075 |
| SfcI | CTRYAG | 2 cut(s) | 934, 963 |
| Sfr274I | CTCGAG | 1 cut(s) | 897 |
| SinI | GGWCC | 2 cut(s) | 466, 731 |
| SlaI | CTCGAG | 1 cut(s) | 897 |
| SmlI | CTYRAG | 1 cut(s) | 897 |
| SmoI | CTYRAG | 1 cut(s) | 897 |
| SseBI | AGGCCT | 1 cut(s) | 673 |
| SsiI | CCGC | 4 cut(s) | 128, 184, 778, 890 |
| SstI | GAGCTC | 1 cut(s) | 991 |
| StuI | AGGCCT | 1 cut(s) | 673 |
| StyD4I | CCNGG | 1 cut(s) | 921 |
| TaaI | ACNGT | 3 cut(s) | 938, 972, 1068 |
| TaqI | TCGA | 6 cut(s) | 170, 176, 582, 898, 907, 985 |
| TatI | WGTACW | 1 cut(s) | 632 |
| TauI | GCSGC | 1 cut(s) | 130 |
| Tru1I | TTAA | 1 cut(s) | 753 |
| Tru9I | TTAA | 1 cut(s) | 753 |
| TscAI | CASTG | 2 cut(s) | 366, 391 |
| TseI | GCWGC | 5 cut(s) | 14, 78, 350, 962, 1043 |
| TspDTI | ATGAA | 1 cut(s) | 741 |
| TspRI | CASTG | 2 cut(s) | 366, 391 |
| VpaK11BI | GGWCC | 2 cut(s) | 466, 731 |
| XapI | RAATTY | 6 cut(s) | 57, 146, 268, 813, 869, 1004 |
| XceI | RCATGY | 1 cut(s) | 836 |
| XhoI | CTCGAG | 1 cut(s) | 897 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1005 |
| ZrmI | AGTACT | 1 cut(s) | 634 |
| Zsp2I | ATGCAT | 1 cut(s) | 834 |