Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0005713

Physical Location & Seq

Genomic Coordinates Reverse (-)

18472021 .. 18475180

Gene Structure 3160 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G179400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 702 bp

ATGAAGGTCTCTGCTCTAATCCTTACAACTCCAAAGCCCCTCCCCCATATTCAAAGCCTTCATCCTACAATCTCCTTCTCCTCCTGCAATTCCAAACCCACTTGTTCTTGTTCATCTTCTTCACCGTCCACAGCTGAAAACAATGCAAAGGTGTCTTGGGCTTCAAAATTTGTGACCAAGAAGAGTGTTTTGGATGTGGGTTTTGGGCTTTTAGCTGCTTCACTTGTGGCATTGTCACCTCTGGAAGCTAATGCCACAAGAATTGAATACTACGCCACTGTGGGGGAGCCTTTGTGTGAATTGAACTTTGTTCGTTCTGGGCTTGGCTTCTGTGATGTTTCAGTGGGTTCTGGTGTGGACGCTCCTCGTGGTGAGCTCATCAACGTTCACTACACCGCAAGATTTGCTGATGGGACAGTCTTTGACAGCAGCTACAAACGTGGCAGACCTCTGACTATGCGTATTGGTGTTGGCAAGGTCATTAGAGGATTGGATCAAGGAATTTATGGGGGTGATGGTGTGCCTCCAATGCAAGTAGGGGGAAAACGTAAGCTCCACATTCCTTCACATTTAGCATATGGACCAGAACCTGCAGGATGCTTCTCAGGTGACTGCAATATACCCGGCAATGCTACTCTTGTCTACGATATTAATTTTGTCGGTATCTACTCGGGAAATAGGCCATTGCCAGCAAATAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0005488 GO:0005527 GO:0005528 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006457 GO:0006464 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009987 GO:0016020 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0031976 GO:0031984 GO:0034357 GO:0036211 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035 GO:0061077 GO:0071704 GO:0097159 GO:0140096 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FKBP_C

Protein Analysis

234

Amino Acids

24.62

Weight (kDa)

8.97

Isoelectric Point (pI)

39.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005713)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39710 AT4G39710 AT4G39710
fragaria_vesca	FvH4_1g21630 FvH4_1g21630 FvH4_1g21630 FvH4_1g21630 FvH4_1g21630 FvH4_1g21630 FvH4_1g21630 FvH4_1g21630 FvH4_1g21630
malus_domestica	MD15G1328100.v1.1
prunus_persica	Prupe.6G179400_v2.0.a1 Prupe.6G179400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0115501
rosa_laevigata	RLG00000018188
rosa_multiflora	Rmu_sc0008334.1_g000015
rosa_roxburghii	Rroxscaffold_2G00128150 Rroxscaffold_2G00129030
rosa_rugosa	Rorug02G0196900 Rorug02G0197000 Rorug02G0197100
rosa_samantha	Rh2AG254700 Rh2BG265400 Rh2CG259900 Rh2DG262800
rosa_wichuraiana	Rw2G019930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	598
AccI	GTMKAC	1 cut(s)	642
AciI	CCGC	1 cut(s)	396
AclI	AACGTT	1 cut(s)	384
AclWI	GGATC	1 cut(s)	501
AcsI	RAATTY	2 cut(s)	167, 501
AfiI	CCNNNNNNNGG	1 cut(s)	282
AgsI	TTSAA	4 cut(s)	53, 165, 266, 304
AjuI	GAANNNNNNNTTGG	2 cut(s)	173, 205
AluBI	AGCT	6 cut(s)	134, 215, 248, 376, 432, 553
AluI	AGCT	6 cut(s)	134, 215, 248, 376, 432, 553
Alw21I	GWGCWC	1 cut(s)	378
Alw26I	GTCTC	1 cut(s)	13
AlwI	GGATC	1 cut(s)	501
AlwNI	CAGNNNCTG	1 cut(s)	590
Ama87I	CYCGRG	1 cut(s)	670
AoxI	GGCC	1 cut(s)	680
ApeKI	GCWGC	2 cut(s)	215, 429
ApoI	RAATTY	2 cut(s)	167, 501
AseI	ATTAAT	1 cut(s)	651
AspS9I	GGNCC	1 cut(s)	581
AsuC2I	CCSGG	1 cut(s)	624
AsuHPI	GGTGA	5 cut(s)	114, 228, 383, 524, 620
AvaI	CYCGRG	1 cut(s)	670
AvaII	GGWCC	1 cut(s)	581
BanII	GRGCYC	1 cut(s)	378
BauI	CACGAG	1 cut(s)	366
Bbv12I	GWGCWC	1 cut(s)	378
BbvI	GCAGC	2 cut(s)	202, 441
BccI	CCATC	2 cut(s)	404, 509
BcnI	CCSGG	1 cut(s)	624
BcoDI	GTCTC	1 cut(s)	13
BfmI	CTRYAG	1 cut(s)	591
BfuAI	ACCTGC	1 cut(s)	598
BisI	GCNGC	2 cut(s)	216, 430
BlsI	GCNGC	2 cut(s)	217, 431
Bme1390I	CCNGG	1 cut(s)	624
Bme18I	GGWCC	1 cut(s)	581
BmeT110I	CYCGRG	1 cut(s)	670
BmgT120I	GGNCC	1 cut(s)	581
BmiI	GGNNCC	1 cut(s)	288
BmrFI	CCNGG	1 cut(s)	624
BmsI	GCATC	1 cut(s)	587
BpuMI	CCSGG	1 cut(s)	624
BsaI	GGTCTC	1 cut(s)	13
BsaXI	ACNNNNNCTCC	4 cut(s)	278, 308, 537, 567
Bsc4I	CCNNNNNNNGG	1 cut(s)	282
Bse3DI	GCAATG	2 cut(s)	634, 683
BseGI	GGATG	3 cut(s)	61, 199, 602
BseLI	CCNNNNNNNGG	1 cut(s)	282
BseMI	GCAATG	2 cut(s)	634, 683
BseMII	CTCAG	1 cut(s)	618
BseRI	GAGGAG	2 cut(s)	70, 354
BseXI	GCAGC	2 cut(s)	202, 441
BshFI	GGCC	1 cut(s)	682
BsiHKAI	GWGCWC	1 cut(s)	378
BsiHKCI	CYCGRG	1 cut(s)	670
BsiSI	CCGG	1 cut(s)	624
BslFI	GGGAC	1 cut(s)	427
BslI	CCNNNNNNNGG	1 cut(s)	282
BsmAI	GTCTC	1 cut(s)	13
BsmFI	GGGAC	1 cut(s)	427
BsnI	GGCC	1 cut(s)	682
Bso31I	GGTCTC	1 cut(s)	13
BsoBI	CYCGRG	1 cut(s)	670
Bsp1286I	GDGCHC	1 cut(s)	378
Bsp143I	GATC	1 cut(s)	493
BspACI	CCGC	1 cut(s)	396
BspANI	GGCC	1 cut(s)	682
BspCNI	CTCAG	1 cut(s)	617
BspLI	GGNNCC	1 cut(s)	288
BspMAI	CTGCAG	1 cut(s)	595
BspMI	ACCTGC	1 cut(s)	598
BspPI	GGATC	1 cut(s)	501
BspTNI	GGTCTC	1 cut(s)	13
BsrDI	GCAATG	2 cut(s)	634, 683
BssMI	GATC	1 cut(s)	493
BssSI	CACGAG	1 cut(s)	366
Bst2BI	CACGAG	1 cut(s)	366
Bst4CI	ACNGT	3 cut(s)	126, 280, 418
Bst6I	CTCTTC	1 cut(s)	176
BstAPI	GCANNNNNTGC	1 cut(s)	404
BstC8I	GCNNGC	1 cut(s)	690
BstDEI	CTNAG	1 cut(s)	604
BstF5I	GGATG	3 cut(s)	61, 199, 602
BstKTI	GATC	1 cut(s)	496
BstMAI	GTCTC	1 cut(s)	13
BstMBI	GATC	1 cut(s)	493
BstMWI	GCNNNNNNNGC	2 cut(s)	404, 529
BstSCI	CCNGG	1 cut(s)	622
BstSFI	CTRYAG	1 cut(s)	591
BstV1I	GCAGC	2 cut(s)	202, 441
BsuRI	GGCC	1 cut(s)	682
BtsCI	GGATG	3 cut(s)	61, 199, 602
BtsIMutI	CAGTG	2 cut(s)	276, 348
BveI	ACCTGC	1 cut(s)	598
Cac8I	GCNNGC	1 cut(s)	690
CaiI	CAGNNNCTG	1 cut(s)	590
Cfr13I	GGNCC	1 cut(s)	581
CseI	GACGC	1 cut(s)	368
CspCI	CAANNNNNGTGG	2 cut(s)	244, 279
DdeI	CTNAG	1 cut(s)	604
DpnI	GATC	1 cut(s)	495
DpnII	GATC	1 cut(s)	493
Eam1104I	CTCTTC	1 cut(s)	176
EarI	CTCTTC	1 cut(s)	176
Ecl136II	GAGCTC	1 cut(s)	376
Eco24I	GRGCYC	1 cut(s)	378
Eco31I	GGTCTC	1 cut(s)	13
Eco47I	GGWCC	1 cut(s)	581
Eco53kI	GAGCTC	1 cut(s)	376
Eco88I	CYCGRG	1 cut(s)	670
EcoICRI	GAGCTC	1 cut(s)	376
EcoT38I	GRGCYC	1 cut(s)	378
FaiI	YATR	6 cut(s)	48, 458, 507, 577, 579, 620
FaqI	GGGAC	1 cut(s)	427
FauNDI	CATATG	1 cut(s)	577
FblI	GTMKAC	1 cut(s)	642
Fnu4HI	GCNGC	2 cut(s)	216, 430
FokI	GGATG	3 cut(s)	48, 206, 609
FriOI	GRGCYC	1 cut(s)	378
Fsp4HI	GCNGC	2 cut(s)	216, 430
GluI	GCNGC	2 cut(s)	216, 430
HaeIII	GGCC	1 cut(s)	682
HapII	CCGG	1 cut(s)	624
HgaI	GACGC	1 cut(s)	368
HpaII	CCGG	1 cut(s)	624
HphI	GGTGA	5 cut(s)	114, 228, 383, 524, 620
Hpy166II	GTNNAC	4 cut(s)	129, 358, 388, 643
Hpy188I	TCNGA	1 cut(s)	453
Hpy188III	TCNNGA	2 cut(s)	242, 672
Hpy8I	GTNNAC	4 cut(s)	129, 358, 388, 643
HpyAV	CCTTC	3 cut(s)	68, 85, 573
HpyCH4III	ACNGT	3 cut(s)	126, 280, 418
HpyCH4IV	ACGT	3 cut(s)	384, 439, 547
HpyCH4V	TGCA	5 cut(s)	87, 146, 532, 593, 615
HpyF10VI	GCNNNNNNNGC	2 cut(s)	404, 529
HpyF3I	CTNAG	1 cut(s)	604
HpySE526I	ACGT	3 cut(s)	384, 439, 547
Kzo9I	GATC	1 cut(s)	493
LmnI	GCTCC	3 cut(s)	286, 367, 558
LpnPI	CCDG	9 cut(s)	97, 227, 303, 336, 579, 591, 597, 603, 637
Lsp1109I	GCAGC	2 cut(s)	202, 441
LweI	GCATC	1 cut(s)	587
MaeII	ACGT	3 cut(s)	384, 439, 547
MaeIII	GTNAC	3 cut(s)	172, 234, 608
MalI	GATC	1 cut(s)	495
MboI	GATC	1 cut(s)	493
MboII	GAAGA	3 cut(s)	108, 111, 193
MhlI	GDGCHC	1 cut(s)	378
MluCI	AATT	6 cut(s)	88, 167, 261, 299, 501, 652
MnlI	CCTC	7 cut(s)	50, 91, 249, 375, 459, 479, 534
MseI	TTAA	1 cut(s)	651
MspA1I	CMGCKG	1 cut(s)	134
MspI	CCGG	1 cut(s)	624
MspR9I	CCNGG	1 cut(s)	624
MwoI	GCNNNNNNNGC	2 cut(s)	404, 529
NciI	CCSGG	1 cut(s)	624
NdeI	CATATG	1 cut(s)	577
NdeII	GATC	1 cut(s)	493
NlaIV	GGNNCC	1 cut(s)	288
NmuCI	GTSAC	3 cut(s)	172, 234, 608
PkrI	GCNGC	2 cut(s)	217, 431
PshBI	ATTAAT	1 cut(s)	651
Psp124BI	GAGCTC	1 cut(s)	378
Psp1406I	AACGTT	1 cut(s)	384
PspN4I	GGNNCC	1 cut(s)	288
PspPI	GGNCC	1 cut(s)	581
PstI	CTGCAG	1 cut(s)	595
PstNI	CAGNNNCTG	1 cut(s)	590
PvuII	CAGCTG	1 cut(s)	134
SacI	GAGCTC	1 cut(s)	378
SaqAI	TTAA	1 cut(s)	651
SatI	GCNGC	2 cut(s)	216, 430
Sau3AI	GATC	1 cut(s)	493
Sau96I	GGNCC	1 cut(s)	581
SbfI	CCTGCAGG	1 cut(s)	595
ScrFI	CCNGG	1 cut(s)	624
SdaI	CCTGCAGG	1 cut(s)	595
SduI	GDGCHC	1 cut(s)	378
SfaNI	GCATC	1 cut(s)	587
SfcI	CTRYAG	1 cut(s)	591
SinI	GGWCC	1 cut(s)	581
Sse8387I	CCTGCAGG	1 cut(s)	595
Sse9I	AATT	6 cut(s)	88, 167, 261, 299, 501, 652
SsiI	CCGC	1 cut(s)	396
SstI	GAGCTC	1 cut(s)	378
StyD4I	CCNGG	1 cut(s)	622
TaaI	ACNGT	3 cut(s)	126, 280, 418
TaiI	ACGT	3 cut(s)	387, 442, 550
TasI	AATT	6 cut(s)	88, 167, 261, 299, 501, 652
Tru1I	TTAA	1 cut(s)	651
Tru9I	TTAA	1 cut(s)	651
TscAI	CASTG	2 cut(s)	283, 348
TseFI	GTSAC	3 cut(s)	172, 234, 608
TseI	GCWGC	2 cut(s)	215, 429
Tsp45I	GTSAC	3 cut(s)	172, 234, 608
TspDTI	ATGAA	3 cut(s)	17, 50, 102
TspRI	CASTG	2 cut(s)	283, 348
VpaK11BI	GGWCC	1 cut(s)	581
VspI	ATTAAT	1 cut(s)	651
XapI	RAATTY	2 cut(s)	167, 501
XmiI	GTMKAC	1 cut(s)	642

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.