Prupe.6G189600_v2.0.a1

alpha/beta hydrolase fold

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0015316
Physical Location & Seq
Forward (+)
19738989 .. 19741673
2685 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G189600.1

Sequence Viewer

Length: 948 bp
ATGCCTGGCTGCTTTAGCTTGACAGCGTCGCGCGACCGCTGCTTCCGCTACTCCTTCTCATCGCACGGCCTAAAATCCACCACCACCGATTTGGGCGAAGGCACAATCATGCACTGCTGGGTCCCCAAATCCCACTCCCAATCCAAGCCTACGCTGCTCCTCATCCACGGGATCGGCGCCAACGCAATGTGGCAGTGGCATGAGTTCGTCGCCCCTCTAGCCTCCCGCTTCAACCTCTACATCCCGGACCTTATCTTCTTCGGCGACTCCTTCTCGACCCGACCCGACCGCTCCGAGACTTTTCAGGCCCAGTGCGTCGTGGGCCTCCTGGAGGCCCACGGGGTGAAGAAAATGAGCGTCGCTGGGATTAGCTATGGTGGGTTTGTGGCCTACAGCATGGCGGCGCAGTTTGGGGAGCGGATAGAGAGGCTTGTGTTATGCTGCGCCGGGGTGTGTACGGAGGAGAAGGATATGGAGAAGGGGATGTTTCAGGTGAGGAGTGTGGAGGAGGCTGTGAGTATTTTGCTGCCTCAGAGGCCTCAGCAGGTTAGGCAGCTGCTGAAGATCTCTTTTCACAAGCCTGCTAAGAATGTGCCCTCTTGTTTTCTCAATGATTTTATTGAGGTGATGTGCACAGAACACCTTCAAGAGAGGAAAGGATTGATTCAAGCCCTGCACAAGGACAGAAAATTGTCCGATCTTCCCAAGATATCCCACCCTACACTAATCATCTGGGGAGAGCATGACCTGGTATTCCCACTGGAATTGGCGCACCGATTAAAAAGGCAAATAGGTGAGAGTTCACAACTAGTGATCTTAAAGAATGCAGGACATGCCATAAATGTAGAGAAACCCAAAGAGATGTACAAGCACATGAAGTCTTTCCTCATTGATCCACTTGCTCCACCTAAACAAGAAAGCCACAGCAACGGCCGCAAGGTGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_1 Abhydrolase_4 Abhydrolase_6

Protein Analysis

316

Amino Acids

35.53

Weight (kDa)

8.79

Isoelectric Point (pI)

43.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015316)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G39955
fragaria_vesca FvH4_1g20610
malus_domestica MD01G1032400.v1.1
prunus_persica Prupe.6G189600_v2.0.a1
pyrus_communis pycom01g05960
rosa_chinensis RchiOBHm_Chr2g0113041
rosa_laevigata RLG00000018032
rosa_multiflora Rmu_co8372391.1_g000001 Rmu_sc0002351.1_g000106
rosa_roxburghii Rroxscaffold_2G00130920
rosa_rugosa Rorug02G0183400
rosa_samantha Rh2AG238600 Rh2BG252400 Rh2CG242600 Rh2DG246600
rosa_wichuraiana Rw2G018710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 535
AccB1I GGYRCC 1 cut(s) 176
AccBSI CCGCTC 2 cut(s) 291, 418
AccII CGCG 2 cut(s) 31, 33
AciI CCGC 7 cut(s) 37, 46, 226, 289, 401, 418, 934
AclWI GGATC 2 cut(s) 179, 887
AcoI YGGCCR 1 cut(s) 931
AcuI CTGAAG 1 cut(s) 581
AcyI GRCGYC 1 cut(s) 177
AdeI CACNNNGTG 1 cut(s) 343
AfaI GTAC 2 cut(s) 457, 866
AfiI CCNNNNNNNGG 3 cut(s) 331, 679, 940
AgsI TTSAA 3 cut(s) 232, 647, 668
AhlI ACTAGT 1 cut(s) 808
AjnI CCWGG 3 cut(s) 4, 327, 747
AluBI AGCT 3 cut(s) 18, 372, 556
AluI AGCT 3 cut(s) 18, 372, 556
Alw21I GWGCWC 1 cut(s) 635
Alw26I GTCTC 1 cut(s) 290
Alw44I GTGCAC 1 cut(s) 631
AlwI GGATC 2 cut(s) 179, 887
AlwNI CAGNNNCTG 1 cut(s) 559
AoxI GGCC 7 cut(s) 67, 306, 322, 333, 387, 536, 931
ApaLI GTGCAC 1 cut(s) 631
ApeKI GCWGC 7 cut(s) 9, 39, 154, 441, 526, 553, 556
Asp700I GAANNNNTTC 2 cut(s) 642, 881
AspLEI GCGC 5 cut(s) 33, 179, 406, 446, 772
AspS9I GGNCC 5 cut(s) 121, 247, 307, 322, 334
AsuC2I CCSGG 2 cut(s) 245, 448
AsuHPI GGTGA 4 cut(s) 355, 505, 637, 806
AvaII GGWCC 2 cut(s) 121, 247
BaeGI GKGCMC 2 cut(s) 597, 635
BanI GGYRCC 1 cut(s) 176
Bbv12I GWGCWC 1 cut(s) 635
BbvCI CCTCAGC 1 cut(s) 540
BbvI GCAGC 6 cut(s) 26, 141, 428, 513, 543, 565
BceAI ACGGC 2 cut(s) 82, 946
BciT130I CCWGG 3 cut(s) 6, 329, 749
BcnI CCSGG 2 cut(s) 245, 448
BcoDI GTCTC 1 cut(s) 290
BcuI ACTAGT 1 cut(s) 808
BfaI CTAG 2 cut(s) 218, 809
BfmI CTRYAG 1 cut(s) 391
BfoI RGCGCY 1 cut(s) 180
BfuAI ACCTGC 1 cut(s) 535
BglI GCCNNNNNGGC 1 cut(s) 535
BglII AGATCT 1 cut(s) 564
BisI GCNGC 9 cut(s) 10, 40, 155, 402, 442, 527, 554, 557, 934
BlsI GCNGC 9 cut(s) 11, 41, 156, 403, 443, 528, 555, 558, 935
Bme1390I CCNGG 5 cut(s) 6, 245, 329, 448, 749
Bme18I GGWCC 2 cut(s) 121, 247
BmgT120I GGNCC 5 cut(s) 121, 247, 307, 322, 334
BmiI GGNNCC 3 cut(s) 122, 123, 178
BmrFI CCNGG 5 cut(s) 6, 245, 329, 448, 749
BmrI ACTGGG 1 cut(s) 304
BmuI ACTGGG 1 cut(s) 304
BpmI CTGGAG 1 cut(s) 350
Bpu10I CCTNAGC 1 cut(s) 540
BpuMI CCSGG 2 cut(s) 245, 448
BsaHI GRCGYC 1 cut(s) 177
BsaJI CCNNGG 3 cut(s) 166, 337, 447
Bsc4I CCNNNNNNNGG 3 cut(s) 331, 679, 940
Bse1I ACTGG 2 cut(s) 310, 765
Bse3DI GCAATG 1 cut(s) 192
BseBI CCWGG 3 cut(s) 6, 329, 749
BseDI CCNNGG 3 cut(s) 166, 337, 447
BseGI GGATG 3 cut(s) 162, 240, 489
BseLI CCNNNNNNNGG 3 cut(s) 331, 679, 940
BseMI GCAATG 1 cut(s) 192
BseMII CTCAG 2 cut(s) 545, 554
BseNI ACTGG 2 cut(s) 310, 765
BseRI GAGGAG 4 cut(s) 149, 476, 511, 521
BseSI GKGCMC 2 cut(s) 597, 635
BseX3I CGGCCG 1 cut(s) 931
BseXI GCAGC 6 cut(s) 26, 141, 428, 513, 543, 565
BseYI CCCAGC 2 cut(s) 117, 362
BsgI GTGCAG 1 cut(s) 659
Bsh1236I CGCG 2 cut(s) 31, 33
Bsh1285I CGRYCG 3 cut(s) 37, 289, 934
BshFI GGCC 7 cut(s) 69, 308, 324, 335, 389, 538, 933
BshNI GGYRCC 1 cut(s) 176
BsiEI CGRYCG 3 cut(s) 37, 289, 934
BsiHKAI GWGCWC 1 cut(s) 635
BsiSI CCGG 2 cut(s) 245, 447
BslFI GGGAC 1 cut(s) 107
BslI CCNNNNNNNGG 3 cut(s) 331, 679, 940
BsmAI GTCTC 1 cut(s) 290
BsmFI GGGAC 1 cut(s) 107
BsmI GAATGC 1 cut(s) 829
BsnI GGCC 7 cut(s) 69, 308, 324, 335, 389, 538, 933
Bsp1286I GDGCHC 2 cut(s) 597, 635
Bsp1407I TGTACA 1 cut(s) 864
Bsp143I GATC 5 cut(s) 171, 564, 697, 813, 892
BspACI CCGC 7 cut(s) 37, 46, 226, 289, 401, 418, 934
BspANI GGCC 7 cut(s) 69, 308, 324, 335, 389, 538, 933
BspCNI CTCAG 2 cut(s) 544, 553
BspFNI CGCG 2 cut(s) 31, 33
BspLI GGNNCC 3 cut(s) 122, 123, 178
BspMI ACCTGC 1 cut(s) 535
BspPI GGATC 2 cut(s) 179, 887
BspT107I GGYRCC 1 cut(s) 176
BsrBI CCGCTC 2 cut(s) 291, 418
BsrDI GCAATG 1 cut(s) 192
BsrGI TGTACA 1 cut(s) 864
BsrI ACTGG 2 cut(s) 310, 765
BssECI CCNNGG 3 cut(s) 166, 337, 447
BssMI GATC 5 cut(s) 171, 564, 697, 813, 892
BssNI GRCGYC 1 cut(s) 177
Bst2UI CCWGG 3 cut(s) 6, 329, 749
BstACI GRCGYC 1 cut(s) 177
BstAPI GCANNNNNTGC 1 cut(s) 833
BstAUI TGTACA 1 cut(s) 864
BstC8I GCNNGC 1 cut(s) 582
BstDEI CTNAG 3 cut(s) 531, 540, 585
BstDSI CCRYGG 2 cut(s) 166, 337
BstENI CCTNNNNNAGG 2 cut(s) 329, 677
BstF5I GGATG 3 cut(s) 162, 240, 489
BstFNI CGCG 2 cut(s) 31, 33
BstH2I RGCGCY 1 cut(s) 180
BstHHI GCGC 5 cut(s) 33, 179, 406, 446, 772
BstKTI GATC 5 cut(s) 174, 567, 700, 816, 895
BstMAI GTCTC 1 cut(s) 290
BstMBI GATC 5 cut(s) 171, 564, 697, 813, 892
BstMCI CGRYCG 3 cut(s) 37, 289, 934
BstNI CCWGG 3 cut(s) 6, 329, 749
BstNSI RCATGY 1 cut(s) 836
BstSCI CCNGG 5 cut(s) 4, 243, 327, 446, 747
BstSFI CTRYAG 1 cut(s) 391
BstSLI GKGCMC 2 cut(s) 597, 635
BstUI CGCG 2 cut(s) 31, 33
BstV1I GCAGC 6 cut(s) 26, 141, 428, 513, 543, 565
BstX2I RGATCY 1 cut(s) 564
BstXI CCANNNNNNTGG 1 cut(s) 91
BstYI RGATCY 1 cut(s) 564
BstZI CGGCCG 1 cut(s) 931
BsuRI GGCC 7 cut(s) 69, 308, 324, 335, 389, 538, 933
BtgI CCRYGG 2 cut(s) 166, 337
BtgZI GCGATG 1 cut(s) 45
BtsCI GGATG 3 cut(s) 162, 240, 489
BtsI GCAGTG 2 cut(s) 112, 200
BtsIMutI CAGTG 4 cut(s) 112, 200, 317, 758
BveI ACCTGC 1 cut(s) 535
Cac8I GCNNGC 1 cut(s) 582
CaiI CAGNNNCTG 1 cut(s) 559
CfoI GCGC 5 cut(s) 33, 179, 406, 446, 772
Cfr13I GGNCC 5 cut(s) 121, 247, 307, 322, 334
CseI GACGC 3 cut(s) 15, 304, 346
CsiI ACCWGGT 1 cut(s) 747
Csp6I GTAC 2 cut(s) 456, 865
CspCI CAANNNNNGTGG 2 cut(s) 747, 782
CviAII CATG 6 cut(s) 109, 200, 397, 743, 833, 874
CviQI GTAC 2 cut(s) 456, 865
DdeI CTNAG 3 cut(s) 531, 540, 585
DinI GGCGCC 1 cut(s) 178
DpnI GATC 5 cut(s) 173, 566, 699, 815, 894
DpnII GATC 5 cut(s) 171, 564, 697, 813, 892
DraIII CACNNNGTG 1 cut(s) 343
EaeI YGGCCR 1 cut(s) 931
EagI CGGCCG 1 cut(s) 931
EclXI CGGCCG 1 cut(s) 931
Eco147I AGGCCT 1 cut(s) 538
Eco32I GATATC 1 cut(s) 711
Eco47I GGWCC 2 cut(s) 121, 247
Eco52I CGGCCG 1 cut(s) 931
Eco57I CTGAAG 1 cut(s) 581
EcoNI CCTNNNNNAGG 2 cut(s) 329, 677
EcoO109I RGGNCCY 1 cut(s) 121
EcoRII CCWGG 3 cut(s) 4, 327, 747
EcoRV GATATC 1 cut(s) 711
EgeI GGCGCC 1 cut(s) 178
EheI GGCGCC 1 cut(s) 178
FaeI CATG 6 cut(s) 112, 203, 400, 746, 836, 877
FaqI GGGAC 1 cut(s) 107
FatI CATG 6 cut(s) 108, 199, 396, 742, 832, 873
FauI CCCGC 1 cut(s) 233
Fnu4HI GCNGC 9 cut(s) 10, 40, 155, 402, 442, 527, 554, 557, 934
FokI GGATG 3 cut(s) 149, 227, 496
Fsp4HI GCNGC 9 cut(s) 10, 40, 155, 402, 442, 527, 554, 557, 934
FspBI CTAG 2 cut(s) 218, 809
GlaI GCGC 5 cut(s) 32, 178, 405, 445, 771
GluI GCNGC 9 cut(s) 10, 40, 155, 402, 442, 527, 554, 557, 934
GsaI CCCAGC 2 cut(s) 121, 366
GsuI CTGGAG 1 cut(s) 350
HaeII RGCGCY 1 cut(s) 180
HaeIII GGCC 7 cut(s) 69, 308, 324, 335, 389, 538, 933
HapII CCGG 2 cut(s) 245, 447
HgaI GACGC 3 cut(s) 15, 304, 346
HhaI GCGC 5 cut(s) 33, 179, 406, 446, 772
Hin1I GRCGYC 1 cut(s) 177
Hin1II CATG 6 cut(s) 112, 203, 400, 746, 836, 877
Hin6I GCGC 5 cut(s) 31, 177, 404, 444, 770
HinP1I GCGC 5 cut(s) 31, 177, 404, 444, 770
HinfI GANTC 2 cut(s) 266, 664
HpaII CCGG 2 cut(s) 245, 447
HphI GGTGA 4 cut(s) 355, 505, 637, 806
Hpy166II GTNNAC 3 cut(s) 456, 633, 803
Hpy188I TCNGA 3 cut(s) 295, 534, 697
Hpy188III TCNNGA 2 cut(s) 274, 647
Hpy8I GTNNAC 3 cut(s) 456, 633, 803
Hpy99I CGWCG 4 cut(s) 31, 212, 320, 362
HpyAV CCTTC 6 cut(s) 64, 92, 280, 460, 472, 653
HpyCH4V TGCA 4 cut(s) 112, 633, 676, 827
HpyF3I CTNAG 3 cut(s) 531, 540, 585
Hsp92I GRCGYC 1 cut(s) 177
Hsp92II CATG 6 cut(s) 112, 203, 400, 746, 836, 877
HspAI GCGC 5 cut(s) 31, 177, 404, 444, 770
KasI GGCGCC 1 cut(s) 176
KflI GGGWCCC 1 cut(s) 121
Kzo9I GATC 5 cut(s) 171, 564, 697, 813, 892
LmnI GCTCC 4 cut(s) 162, 296, 415, 907
Lsp1109I GCAGC 6 cut(s) 26, 141, 428, 513, 543, 565
MabI ACCWGGT 1 cut(s) 747
MaeI CTAG 2 cut(s) 218, 809
MalI GATC 5 cut(s) 173, 566, 699, 815, 894
MbiI CCGCTC 2 cut(s) 291, 418
MboI GATC 5 cut(s) 171, 564, 697, 813, 892
MboII GAAGA 5 cut(s) 247, 250, 358, 574, 692
MflI RGATCY 1 cut(s) 564
MhlI GDGCHC 2 cut(s) 597, 635
MluCI AATT 2 cut(s) 689, 764
Mly113I GGCGCC 1 cut(s) 177
MlyI GAGTC 1 cut(s) 260
MroXI GAANNNNTTC 2 cut(s) 642, 881
MseI TTAA 2 cut(s) 779, 818
MslI CAYNNNNRTG 1 cut(s) 107
MspA1I CMGCKG 2 cut(s) 39, 556
MspI CCGG 2 cut(s) 245, 447
MspR9I CCNGG 5 cut(s) 6, 245, 329, 448, 749
Mva1269I GAATGC 1 cut(s) 829
MvaI CCWGG 3 cut(s) 6, 329, 749
MvnI CGCG 2 cut(s) 31, 33
NarI GGCGCC 1 cut(s) 177
NciI CCSGG 2 cut(s) 245, 448
NdeII GATC 5 cut(s) 171, 564, 697, 813, 892
NlaIII CATG 6 cut(s) 112, 203, 400, 746, 836, 877
NlaIV GGNNCC 3 cut(s) 122, 123, 178
NspI RCATGY 1 cut(s) 836
PceI AGGCCT 1 cut(s) 538
PctI GAATGC 1 cut(s) 829
PdmI GAANNNNTTC 2 cut(s) 642, 881
PfeI GAWTC 1 cut(s) 664
PflFI GACNNNGTC 1 cut(s) 25
PfoI TCCNGGA 2 cut(s) 243, 327
PkrI GCNGC 9 cut(s) 11, 41, 156, 403, 443, 528, 555, 558, 935
PleI GAGTC 1 cut(s) 260
PluTI GGCGCC 1 cut(s) 180
PpsI GAGTC 1 cut(s) 260
PpuMI RGGWCCY 1 cut(s) 121
Psp5II RGGWCCY 1 cut(s) 121
Psp6I CCWGG 3 cut(s) 4, 327, 747
PspFI CCCAGC 2 cut(s) 117, 362
PspGI CCWGG 3 cut(s) 4, 327, 747
PspN4I GGNNCC 3 cut(s) 122, 123, 178
PspPI GGNCC 5 cut(s) 121, 247, 307, 322, 334
PspPPI RGGWCCY 1 cut(s) 121
PstNI CAGNNNCTG 1 cut(s) 559
PsuI RGATCY 1 cut(s) 564
PsyI GACNNNGTC 1 cut(s) 25
PvuII CAGCTG 1 cut(s) 556
RsaI GTAC 2 cut(s) 457, 866
RsaNI GTAC 2 cut(s) 456, 865
RseI CAYNNNNRTG 1 cut(s) 107
SaqAI TTAA 2 cut(s) 779, 818
SatI GCNGC 9 cut(s) 10, 40, 155, 402, 442, 527, 554, 557, 934
Sau3AI GATC 5 cut(s) 171, 564, 697, 813, 892
Sau96I GGNCC 5 cut(s) 121, 247, 307, 322, 334
SchI GAGTC 1 cut(s) 260
ScrFI CCNGG 5 cut(s) 6, 245, 329, 448, 749
SduI GDGCHC 2 cut(s) 597, 635
SexAI ACCWGGT 1 cut(s) 747
SfcI CTRYAG 1 cut(s) 391
SfoI GGCGCC 1 cut(s) 178
SinI GGWCC 2 cut(s) 121, 247
SmiMI CAYNNNNRTG 1 cut(s) 107
SpeI ACTAGT 1 cut(s) 808
Sse9I AATT 2 cut(s) 689, 764
SseBI AGGCCT 1 cut(s) 538
SsiI CCGC 7 cut(s) 37, 46, 226, 289, 401, 418, 934
SspDI GGCGCC 1 cut(s) 176
SspMI CTAG 2 cut(s) 218, 809
StuI AGGCCT 1 cut(s) 538
StyD4I CCNGG 5 cut(s) 4, 243, 327, 446, 747
TaqI TCGA 1 cut(s) 275
TasI AATT 2 cut(s) 689, 764
TatI WGTACW 1 cut(s) 864
TauI GCSGC 2 cut(s) 404, 936
TfiI GAWTC 1 cut(s) 664
Tru1I TTAA 2 cut(s) 779, 818
Tru9I TTAA 2 cut(s) 779, 818
TscAI CASTG 4 cut(s) 119, 200, 317, 765
TseI GCWGC 7 cut(s) 9, 39, 154, 441, 526, 553, 556
TspDTI ATGAA 1 cut(s) 890
TspGWI ACGGA 1 cut(s) 473
TspRI CASTG 4 cut(s) 119, 200, 317, 765
Tth111I GACNNNGTC 1 cut(s) 25
VneI GTGCAC 1 cut(s) 631
VpaK11BI GGWCC 2 cut(s) 121, 247
XagI CCTNNNNNAGG 2 cut(s) 329, 677
XceI RCATGY 1 cut(s) 836
XcmI CCANNNNNNNNNTGG 1 cut(s) 88
XmnI GAANNNNTTC 2 cut(s) 642, 881
XspI CTAG 2 cut(s) 218, 809
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.